BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780791|ref|YP_003065204.1| exodeoxyribonuclease VII large
subunit [Candidatus Liberibacter asiaticus str. psy62]
         (529 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|241207230|ref|YP_002978326.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861120|gb|ACS58787.1| exodeoxyribonuclease VII, large subunit [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 526

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 240/526 (45%), Positives = 328/526 (62%), Gaps = 4/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F   +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYF+LKD+ +R
Sbjct: 5   FDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E+R
Sbjct: 65  IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K  +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG
Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPGVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +E+ANAI   N L+     PRPD++I+ARGGGS+EDLW FNDE++VRA A S IP+
Sbjct: 185 EGSGEEVANAIRGFNALEPSGAIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   + R +  +
Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             ++ +L++ALP+ DQ L+  R R D     L   LE+    K R F  +   ++ D L 
Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAATGLGRGLELNTINKRRGFERVAAHLRPDLLA 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + RQ + E+    E++V++ +           AIL  L  + K +       +  L
Sbjct: 365 GRIAERRQTLNERMARAERMVERLIDRSKSRVDRAEAILASLPARLKTQTDRGRERLGNL 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
               +  + H++      +S   R+LQS +YKN LKRGY  I+D +N  ++Q   L+   
Sbjct: 425 SRHADTAVRHQLTRARAELSSQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAQLSAGM 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            I I F DG+  A+          P    +  + +      QG LF
Sbjct: 485 GIAIEFADGRVGAMTTEGGA----PPAGAKKRSARPADPPKQGSLF 526


>gi|116250050|ref|YP_765888.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|158564215|sp|Q1MMN0|EX7L_RHIL3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|115254698|emb|CAK05772.1| putative exodeoxyribonuclease VII large subunit [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 526

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 242/526 (46%), Positives = 333/526 (63%), Gaps = 4/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F   +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYF+LKD+ +R
Sbjct: 5   FDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E+R
Sbjct: 65  IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K  +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG
Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPGVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +E+ANAI   N L+   T PRPD++I+ARGGGS+EDLW FNDE++VRA A S+IP+
Sbjct: 185 EGSGEEVANAIRGFNALEPSGTIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESAIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   + R +  +
Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAGLAARLQGCMNRQMDQR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             ++ +L++ALP+ DQ L+  R R D     L   LE+    K R F  +   ++ D L 
Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAATGLGRGLELNTINKRRGFERVAAHLRPDLLA 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + RQ + E+    E++V++ +           AIL  L  + K +       +  L
Sbjct: 365 GRIAERRQTLNERMARAERMVERLIDRSKSRVDRAEAILASLPARLKTQTDRGRERLGNL 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
               +  + H++    + +S   R+LQS +YKN LKRGY  I+D +N  ++Q  +L+   
Sbjct: 425 SRHADTAVRHQLTRARSELSAQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAHLSAGM 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            I I F DG+  A+          P    +  + K  +   QG LF
Sbjct: 485 GIAIEFADGRVGAMTTEGG----TPPAGAKKRSTKPAEPPKQGSLF 526


>gi|190889943|ref|YP_001976485.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli
           CIAT 652]
 gi|226697598|sp|B3PYF6|EX7L_RHIE6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|190695222|gb|ACE89307.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli
           CIAT 652]
          Length = 526

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 243/528 (46%), Positives = 330/528 (62%), Gaps = 4/528 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           N F   +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 3   NLFDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDR 62

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +RIDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E
Sbjct: 63  ARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIE 122

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK+KL  EGLF    K  +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKV
Sbjct: 123 ERKRKLGAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKV 182

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+    E+ANAI   N L+ G    RPD++I+ARGGGS+EDLW FNDE++VRA A S I
Sbjct: 183 QGEGAGDEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRI 242

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   I R + 
Sbjct: 243 PLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQATALAARLQGCINRQMD 302

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +  ++ +L++ALP+ DQ L+  R R D     L   LE+    K R F  + + ++ D 
Sbjct: 303 QRRQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVASHLRPDV 362

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L + I + RQ + ++    E+ V++ L           AIL  L  + K +       + 
Sbjct: 363 LSNRIAERRQLLNDRMARAERTVERLLDRSKSRIDRAEAILASLPTRLKTQTDRGRERLG 422

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L    +  + H++      +S   R+LQS +YKN LKRGY  I+D ++  ++Q   L+ 
Sbjct: 423 NLTRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSA 482

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              I I F DG+  A+          P    +  + K      QG LF
Sbjct: 483 GMGIAIEFADGRVGAMTTEGG----TPPAGAKKRSAKPADPTKQGSLF 526


>gi|254780791|ref|YP_003065204.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040468|gb|ACT57264.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 529

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 529/529 (100%), Positives = 529/529 (100%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN
Sbjct: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL
Sbjct: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK
Sbjct: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS
Sbjct: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI
Sbjct: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD
Sbjct: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
           FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI
Sbjct: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA
Sbjct: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF
Sbjct: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529


>gi|209551852|ref|YP_002283769.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226697599|sp|B5ZYC6|EX7L_RHILW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|209537608|gb|ACI57543.1| exodeoxyribonuclease VII, large subunit [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 527

 Score =  473 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 239/526 (45%), Positives = 329/526 (62%), Gaps = 3/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F   +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYF+LKD+ +R
Sbjct: 5   FDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E+R
Sbjct: 65  IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K  +PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG
Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +E+ANAI   N L+     PRPD++I+ARGGGS+EDLW FNDE++VRA A S IP+
Sbjct: 185 EGSGEEVANAIRGFNALEPAGLIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   + R +  +
Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             ++ +L++ALP+ DQ L+  R R D     L   LE+    K R F  +   ++ D L 
Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVGAHLRPDLLS 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + RQ + E+    E++V++ +           AIL  L  + K +       +  L
Sbjct: 365 GRIAERRQTLNERIVRAERMVERLIDRSKSRIDRAEAILASLPARFKTQTDRSREALANL 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
               +  + H++      +S   R+LQS +YKN LKRGY  I+D ++  ++Q   L+  +
Sbjct: 425 SRHGDTAIRHQLARARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSAGS 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + I F DG+  A+      P     K+             QG LF
Sbjct: 485 AVSIEFSDGRIGAVTTEGGAPPASLKKRPAREAG---DPPKQGSLF 527


>gi|327191973|gb|EGE58954.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli
           CNPAF512]
          Length = 526

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 242/526 (46%), Positives = 329/526 (62%), Gaps = 4/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F   +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYFSLKD+ +R
Sbjct: 5   FDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E+R
Sbjct: 65  IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K++L  EGLF    K  +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG
Sbjct: 125 KRRLGAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +E+ANAI   N L+ G    RPD++I+ARGGGS+EDLW FNDE +VRA A S IP+
Sbjct: 185 EGSGEEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDETVVRAAAESRIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   + R +  +
Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             ++ +L++ALP+ DQ L+  R R D     L   LE+    K R F  + + ++ D L 
Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVASHLRPDVLS 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
           + I + RQ + E+    E+ V++ L           AIL  L  + K +       +  L
Sbjct: 365 NRIAERRQLLSERMARAERTVERLLDRSKSRIDRAEAILASLPARLKTQTDRGRERLGNL 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
               +  + H++      +S   R+LQS +YKN LKRGY  I+D ++  ++Q   L+   
Sbjct: 425 TRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSAGM 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            I I F DG+  A+          P    +  + K      QG LF
Sbjct: 485 GIAIEFADGRVGAMTTEGGA----PPASAKKRSAKPADPTKQGTLF 526


>gi|86355934|ref|YP_467826.1| exodeoxyribonuclease VII large subunit [Rhizobium etli CFN 42]
 gi|123513318|sp|Q2KDI7|EX7L_RHIEC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|86280036|gb|ABC89099.1| exodeoxyribonuclease VII large subunit protein [Rhizobium etli CFN
           42]
          Length = 526

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 239/528 (45%), Positives = 330/528 (62%), Gaps = 4/528 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           N F   +  +  EYSVSELS  +K  +E+    V VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 3   NLFDSDSPTNLAEYSVSELSGSIKRTIETAFDQVRVRGEISGYRGPHSSGHAYFALKDDR 62

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +RIDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E
Sbjct: 63  ARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIE 122

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKV
Sbjct: 123 ERKRRLGAEGLFDAARKKRLPFMPHVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKV 182

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+   +E+ANAI   N L+      RPD++I+ARGGGS+EDLW FNDE++VRA A S I
Sbjct: 183 QGEGSGEEVANAIRGFNALEPASAISRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRI 242

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++    L ARL   + R + 
Sbjct: 243 PLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMD 302

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +  ++ SL++A P+ DQ L+  R R D     L   LE+    K R F  +I  ++ D 
Sbjct: 303 QRRQSVRSLMRAFPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVIAHLRPDL 362

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   I + RQ + E+    E++V++ +       +   AIL  L  + K +       + 
Sbjct: 363 LSGRISERRQMLNERMVRAERMVERLIDRSASRVERAEAILASLPARLKAQTDRSRERLG 422

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L    +  + H++      +S   R+LQS +YKN L+RGY  I+D +N  ++Q   L+ 
Sbjct: 423 NLTRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLRRGYAVIRDEDNRPVSQAAALSA 482

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              I I F DG+  A+          P    +  + K  +   QG LF
Sbjct: 483 GMGIAIEFADGRIGAMTTEGG----TPPGGAKKRSTKPAEPTKQGSLF 526


>gi|163757587|ref|ZP_02164676.1| putative exodeoxyribonuclease VII large subunit [Hoeflea
           phototrophica DFL-43]
 gi|162285089|gb|EDQ35371.1| putative exodeoxyribonuclease VII large subunit [Hoeflea
           phototrophica DFL-43]
          Length = 530

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 223/531 (41%), Positives = 326/531 (61%), Gaps = 3/531 (0%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +  +  E++VSELS  ++  VE    +V VRGEISGYRG HSSGHAYFSLKD+
Sbjct: 1   MSSLLDDSPTNAAEFTVSELSGSIRRTVEDAFGNVRVRGEISGYRGPHSSGHAYFSLKDD 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +RI+A+IWKG  ++++  PEEG+E +  GKITT+ GSSKYQI+IES+ P+G+G L+  +
Sbjct: 61  RARIEAVIWKGVFSRLKHRPEEGLEVIATGKITTYAGSSKYQIVIESIEPAGAGALMALI 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+R+ KL  EGLF +  K  +P++P +I V+TSPTGAVIRDIL RI  RFP+ VI++PV+
Sbjct: 121 EERRCKLAAEGLFDEARKQLLPYMPLVIGVVTSPTGAVIRDILHRIEDRFPVHVIVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    E+ANAI   N L  G    RPD+II+ARGGGS+EDLW FNDE +VRA A S 
Sbjct: 181 VQGDTSGNEVANAITGFNALAPGGRIKRPDLIIVARGGGSLEDLWGFNDEAVVRAAAESD 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETDWTL D+A+D RAPTPTGAAEMAVPVK  L++ L  L ARL +   R++
Sbjct: 241 IPLISAVGHETDWTLIDHASDRRAPTPTGAAEMAVPVKADLEAHLAGLAARLKSAQSRML 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   +  L +ALP  D  L+  R RLDR  + L   L++    + R F     RI   
Sbjct: 301 DRRREAVRGLTRALPTLDSVLALPRQRLDRSGQGLGQALQLNTANRRRGFERQAARITPI 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L+  I++ RQ + ++    ++ +++ +  +    +    +L  +  +      +    +
Sbjct: 361 ALVSAIREKRQVLRDRATRADRSLERRVEVLRTGLERHALVLSAVPRRITETQTHARERL 420

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R E  L+  I     ++    R+L+S +Y++ L RGY  +++ +   +++   + 
Sbjct: 421 TGLGRRGETALTQLIGQHKRALGAQARMLKSLSYQSVLGRGYAVVRNQDRKLLSRAEQVQ 480

Query: 481 TKTRILINFFDGQANAIV--INKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           +   I + F DG+ +A+V       P  +P K+ +   NK  + G QG LF
Sbjct: 481 SGEMIGVEFADGEVSALVNGTGAEAPSSKPKKQTRTKANKTPEPG-QGSLF 530


>gi|222084548|ref|YP_002543077.1| exodeoxyribonuclease VII, large subunit [Agrobacterium radiobacter
           K84]
 gi|221721996|gb|ACM25152.1| exodeoxyribonuclease VII, large subunit [Agrobacterium radiobacter
           K84]
          Length = 571

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 245/538 (45%), Positives = 331/538 (61%), Gaps = 9/538 (1%)

Query: 1   MNPF-SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F    +  +  EYSVSELS  +K  VES    V VRGEISGYRG HSSGHAYFSLKD
Sbjct: 34  MSSFFENDSPSNLAEYSVSELSGSIKRTVESAFDQVRVRGEISGYRGPHSSGHAYFSLKD 93

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +RIDA+IWKGT +K++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  
Sbjct: 94  DRARIDAVIWKGTFSKLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMAL 153

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE+RK+KL  EGLF  + K  +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PV
Sbjct: 154 LEERKRKLGAEGLFDAERKRRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPV 213

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+    E+ANAI   N +  G   PRPD++I+ARGGGS+EDLW FNDE +VRA A S
Sbjct: 214 KVQGEGSGDEVANAIRGFNEVAPGGPLPRPDVLIVARGGGSLEDLWSFNDEAVVRAAAAS 273

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++ L +  ARL   + R 
Sbjct: 274 EIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKADLEAQLASFAARLQGGVSRQ 333

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   + +LL+ALP+ DQ L+  R R D     L   LE+    K R F    + ++ 
Sbjct: 334 MDQRRQAVRALLRALPSLDQLLALPRRRFDEAASGLGRGLELNTLNKRRTFERAASHLRP 393

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           D L + I + RQ + E+    E+ +++ +           A+   L  + + +       
Sbjct: 394 DVLSNRIVERRQMLSERMTRAERTIERMIDRARARIGRADAVFATLPSRLETQTGRARDL 453

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +  L  R +  + H++      ++   R+LQS +YKN LKRGY  ++D  +  ++    L
Sbjct: 454 LGNLSRRTDTAIRHQLVRARGELAAQERVLQSLSYKNVLKRGYAVVRDEADRPVSLAAAL 513

Query: 480 ATKTRILINFFDGQANAIVIN--------KAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           AT   I I F DG+  A+  +        + P    P KK             QG LF
Sbjct: 514 ATGAAISIEFADGRVGAVTGDNSVAPAPTETPTGVPPQKKRVAKPAGSADPSNQGSLF 571


>gi|239833509|ref|ZP_04681837.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum intermedium
           LMG 3301]
 gi|239821572|gb|EEQ93141.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum intermedium
           LMG 3301]
          Length = 529

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 224/521 (42%), Positives = 317/521 (60%), Gaps = 4/521 (0%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ SR++A+I
Sbjct: 13  SSNVAEYSVSEISGALKRTVEDVFGHVRVRGEISGYRGPHSSGHAYFALKDDRSRLEAVI 72

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE+RK++L 
Sbjct: 73  WRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLA 132

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLF    K  +PF+P++I V+TSPTGAVIRD++ RI+ R+PL VI++PV+VQG+    
Sbjct: 133 SEGLFDPAVKQLLPFMPRVIGVVTSPTGAVIRDVIHRIADRYPLHVIVWPVRVQGETSGP 192

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A A+   NTL EG   PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+G
Sbjct: 193 EVATAVHGFNTLPEGGAIPRPDVVIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVG 252

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETDWTL D AAD+RAPTPTGAAEMAVPVK  L ++L    ARL++ I R I  K  +  
Sbjct: 253 HETDWTLIDLAADIRAPTPTGAAEMAVPVKADLLAALAGQSARLSSAISRFIDLKRRSHR 312

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           S  +ALP++DQ L+  R R D     L   L +   +K  HF   + ++    L     +
Sbjct: 313 SAARALPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFEGHVRQLSPRLLQRRFTE 372

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             + I    Q + + ++  LR        +   L    E    R       +++L  R +
Sbjct: 373 LERGISVLGQRLPRALETFLRERRTTFTHRANRLSA--EPILRRTKLATNSMEQLDRRRD 430

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +   I+          R++++ +Y++ L+RG+  + D     I Q   ++    + I 
Sbjct: 431 QAVRILIERAKRRGQELERLMRTLSYESVLERGFAVVFDAEGKPIKQAATVSAGDALSIR 490

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           F DG  +  VI       +P K  Q    +    G QG LF
Sbjct: 491 FRDG--DVAVIADEGGGSEPAKPVQTKKVQSPGSGNQGSLF 529


>gi|15964051|ref|NP_384404.1| exodeoxyribonuclease VII large subunit [Sinorhizobium meliloti
           1021]
 gi|307301196|ref|ZP_07580958.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti
           BL225C]
 gi|307321097|ref|ZP_07600502.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti
           AK83]
 gi|22095673|sp|Q92SR7|EX7L_RHIME RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|15073227|emb|CAC41735.1| Putative exodeoxyribonuclease 7 large subunit [Sinorhizobium
           meliloti 1021]
 gi|306893269|gb|EFN24050.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti
           AK83]
 gi|306903652|gb|EFN34239.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti
           BL225C]
          Length = 526

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 230/526 (43%), Positives = 325/526 (61%), Gaps = 4/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F  ++  +  EYSVSELS  +K  VE    HV VRGEISGYRG HSSGHAYF+LKD+ +R
Sbjct: 5   FDSESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA++WK T  +++F PEEG+E +  G++TTFPGSSKYQI+I+SL P+G+G L+  +E+R
Sbjct: 65  IDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K P+PF+P+++ V+TSPTGAVIRDIL RI+ RFP+ VI++PV+VQG
Sbjct: 125 KRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRIADRFPVHVIVWPVRVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D   +EI  AI   N L+ G + PRPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+
Sbjct: 185 DGACEEIVAAIEGFNALQPGGSIPRPDVLIVARGGGSLEDLWCFNDEAMVRAAAASAIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL D+AAD RAPTPTGAAEMAVPVK  L++ L +L ARL     R +  +
Sbjct: 245 ISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLAARLKGAAARQMDNR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             TL SL +ALP+ DQ L+  R R D     L   L++    K R F      ++ + L 
Sbjct: 305 RQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERNAAHLRPELLT 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I   RQ +L+     E+IV++ ++          A L +L  +   +I      +  L
Sbjct: 365 ARIVDRRQRVLDAVNRAERIVERKVQRGAQRISSADASLRVLPSRLIGQIHRASDRVSSL 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R +  ++  ++   ++++   R+LQS +Y + L+RG+  ++D     + Q   +    
Sbjct: 425 GRRGDAAIAADLRRMKSALAAQDRVLQSLSYHSVLQRGFALVRDAAGEPVKQAAAVHPGM 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + + F DG+  A+        + P K+             QG LF
Sbjct: 485 ALSLEFADGRIAAVAGEDGTAPQSPKKRPARSGEPT----KQGSLF 526


>gi|153010319|ref|YP_001371533.1| exodeoxyribonuclease VII large subunit [Ochrobactrum anthropi ATCC
           49188]
 gi|166232359|sp|A6X3A0|EX7L_OCHA4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|151562207|gb|ABS15704.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum anthropi ATCC
           49188]
          Length = 527

 Score =  456 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 217/521 (41%), Positives = 318/521 (61%), Gaps = 4/521 (0%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ +R++A+I
Sbjct: 11  SSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDRARLEAVI 70

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE+RK++L 
Sbjct: 71  WRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLA 130

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RI+ R+PL VI++PV+VQG+    
Sbjct: 131 TEGLFDPAVKQLLPFMPRVIGVVTSPTGAVIRDIIHRIADRYPLHVIVWPVRVQGETSGP 190

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A A+   N L +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+G
Sbjct: 191 EVAAAVDGFNALPDEGNIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVG 250

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETDWTL D AAD+RAPTPTGAAEMAVPVK  L ++L    ARL++ + R I  K     
Sbjct: 251 HETDWTLIDLAADIRAPTPTGAAEMAVPVKADLLATLAGQSARLSSAMSRFIDLKRQAHR 310

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           S  +ALP++DQ L+  R R D     L   L +   +K  HF+    ++    L     +
Sbjct: 311 SAARALPSADQLLALPRRRFDEAAARLTRALFVNTQKKRVHFDGHARQLSPRLLQRRFTE 370

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +    Q + + ++  LR        +   L    E    R       I++L  R +
Sbjct: 371 LQRDVSALGQRLPRALEAFLRERRTAFIHRANRLSA--EPILRRTKLTSVAIEQLDRRRD 428

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +   I+          R++++ +Y++ L+RG+  + D     + Q  +++    + I 
Sbjct: 429 QAVRLLIERAKRRGQELERLMRTLSYESVLERGFAVVFDEEGKPVKQAGSVSAGDALSIR 488

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           F DG+   +  ++   + +P K  Q    +    G QG LF
Sbjct: 489 FRDGEVAVVAGDE--DESEPAKLVQTKKVQSPGSGNQGSLF 527


>gi|150398684|ref|YP_001329151.1| exodeoxyribonuclease VII large subunit [Sinorhizobium medicae
           WSM419]
 gi|166232367|sp|A6UF86|EX7L_SINMW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|150030199|gb|ABR62316.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium medicae
           WSM419]
          Length = 526

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 229/526 (43%), Positives = 326/526 (61%), Gaps = 4/526 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F  ++  +  EYSVSELS  +K  +E    HV VRGEISGYRG HSSGHAYF+LKD+ +R
Sbjct: 5   FDSESPSNVAEYSVSELSGSIKRTIEQTFEHVRVRGEISGYRGPHSSGHAYFTLKDDRAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA++WKGT  +++F PEEG+E +  G++TTFPGSSKYQ++I++L P+G+G L+  +E+R
Sbjct: 65  IDAVVWKGTFARLKFRPEEGMEVIATGRVTTFPGSSKYQVVIDALEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K P+PF+PK+I V+TSPTGAVIRDIL RI+ RFP+ V+++PV+VQG
Sbjct: 125 KRKLAAEGLFDAGRKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVLVWPVRVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D   +EI  AI   N L+ G    RPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+
Sbjct: 185 DGACEEIVAAIEGFNALQPGGPIARPDVLIVARGGGSLEDLWCFNDEAMVRAAAGSAIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL D+AAD RAPTPTGAAEMAVPVK  L++ L +L ARL    +R +  +
Sbjct: 245 ISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLSARLKGAAVRQMDNR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             TL SL +ALP+ DQ L+  R R D     L   L++    K R F      ++ D L 
Sbjct: 305 RQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERSAAHLRPDLLT 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I   RQ +++     E+IV++ +           A L  L  +   ++      +  +
Sbjct: 365 ARIVDRRQRVVDAVNRAERIVERQVHRGAARVASADASLRALPSRLIGQVHRASDRVSAM 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R +  ++  ++   ++V+   R+LQS +Y+N L+RG+  ++D     + Q   + +  
Sbjct: 425 SRRADAAIAADLRRLKSAVAAQDRVLQSLSYRNVLQRGFALVRDAAGEPVKQAAAVHSGM 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + + F DG+  A+      P + P K+             QG LF
Sbjct: 485 ALSVEFADGRVAAVAGEDGTPSQAPKKRPARAGEPT----KQGSLF 526


>gi|222147129|ref|YP_002548086.1| exodeoxyribonuclease VII large subunit [Agrobacterium vitis S4]
 gi|254783685|sp|B9JYI6|EX7L_AGRVS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|221734119|gb|ACM35082.1| exodeoxyribonuclease VII large subunit [Agrobacterium vitis S4]
          Length = 543

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 230/540 (42%), Positives = 325/540 (60%), Gaps = 15/540 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F      +  E+SVSELS  +K  +E+    V VRGEISG+RG HSSGHAYFSLKD+ +R
Sbjct: 5   FDDDQPSNLTEFSVSELSGSIKRTIETAFDQVRVRGEISGFRGQHSSGHAYFSLKDDKAR 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKG+ +K+++ PEEG+E +  G+ITTFPGSSKYQI+IE + P+G+G L+  +E+R
Sbjct: 65  IDAVIWKGSFSKLKYRPEEGMEVIATGRITTFPGSSKYQIVIEQMEPAGAGALMALIEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K++   EGLF    K  +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG
Sbjct: 125 KRRFTAEGLFDPATKQLLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +    E+ANAI   N  +     PRPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+
Sbjct: 185 EGSGDEVANAINGFNAFQPDGVIPRPDVLIVARGGGSLEDLWSFNDEAVVRAAAASAIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK  L++ L  L ARL   + R + ++
Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKADLEAQLAGLAARLAGAVNRQMDHR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L +L +ALP+ DQ L+  R R D     L  +LE+    K + F     ++  D L+
Sbjct: 305 RQNLRALARALPSLDQLLALPRRRFDEAASGLGRSLELNTMTKRQSFERAAAKLSPDMLV 364

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + RQ + E+    ++I+++ +           A L  +  + K +       +   
Sbjct: 365 RRLVERRQRVSERAALSDRIIERLIERQKANLGRIDATLTAVPARLKAQTGRSRDRLDSF 424

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R +  + + ++   ++VS   R+LQS +YKN L RGY  I+  ++  +++   L    
Sbjct: 425 SRRADSAVINDLRRARSTVSAHDRMLQSLSYKNVLMRGYAVIRGQDDRPLSRAAGLEDGR 484

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKC--------------QLHNNKREKQGTQGELF 529
            I I F DG+ +A V  +      P +                     K E    QG LF
Sbjct: 485 AIAIEFADGRVSA-VTGEGDKASPPPQAASATTTPAPGRPNPLPKSPKKSEPPAGQGSLF 543


>gi|27382618|ref|NP_774147.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium japonicum
           USDA 110]
 gi|31563103|sp|Q89DD2|EX7L_BRAJA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|27355790|dbj|BAC52772.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium japonicum
           USDA 110]
          Length = 545

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/541 (38%), Positives = 306/541 (56%), Gaps = 15/541 (2%)

Query: 3   PFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           P    +  L+ PE++VSELS  LK  VE    HV VRGEISG+RG HSSGH YF+LKD  
Sbjct: 6   PMPPAEPLLNAPEFTVSELSQSLKRTVEDAFGHVRVRGEISGFRGAHSSGHCYFALKDES 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E
Sbjct: 66  AKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGIGALMALME 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RKKKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP  V+++PVKV
Sbjct: 126 ERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRHVLVWPVKV 185

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+   +++A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S I
Sbjct: 186 QGEGSAEQVAAAIRGFNALPEGGKIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESMI 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL D+ AD RAPTPT AAEMAVPV+  L   + +L  R      R  +
Sbjct: 246 PLISAVGHETDITLIDFVADKRAPTPTAAAEMAVPVRSDLFVEVADLARRTRAYWQRAHE 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            + + L +  +ALP +   L+  R RLD     L   L+      +R F     ++    
Sbjct: 306 SRRSELRAAARALPAAGDLLAIPRQRLDSAGAALPRGLKANTHAHFRRFTAAGAKLTLRV 365

Query: 362 LIHNIQKNRQHILEKQQHI-----EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           L   I +    +    + +       + ++  R+  LE + + + L   + Q +N I   
Sbjct: 366 LHGQIAQADHRLTVCGERLGLSARSLLRQRRDRFAGLEVRLRASKLSNAQAQ-RNAIARQ 424

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
                +L  R    L   ++     V  + ++L + +Y+  L RG+  ++D   + +   
Sbjct: 425 RERTHRLAERANRALVTLLQRLDARVEASGKLLSALSYRGVLARGFALVRDEAGHPLHSA 484

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQP--------TKKCQLHNNKREKQGTQGEL 528
            ++    R+ I F DG+  A      P              ++ +    +  K   QG L
Sbjct: 485 DSVGPGARVEIEFADGRVGATTDADRPAPPAKRAQQPKPAAQETKPAPKRVGKPVDQGSL 544

Query: 529 F 529
           F
Sbjct: 545 F 545


>gi|146342911|ref|YP_001207959.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. ORS278]
 gi|146195717|emb|CAL79744.1| putative exonuclease VII, large subunit OB-fold nucleic acid
           binding domain [Bradyrhizobium sp. ORS278]
          Length = 538

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 204/540 (37%), Positives = 296/540 (54%), Gaps = 13/540 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M P       + PE++VSELS  LK  VE    HV VRGEISG+RG HSSGH YF+LKD 
Sbjct: 1   MPPAEALP--NAPEFTVSELSSALKRTVEDQFGHVRVRGEISGFRGPHSSGHCYFALKDE 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+P SSKYQI+IE+L P+G G L+  +
Sbjct: 59  SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPNSSKYQIVIEALEPAGIGALMALM 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK+KL  EGLF    K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PVK
Sbjct: 119 EERKRKLGAEGLFDPARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVK 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD   +++A AI   N L E    PRPD++I+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 179 VQGDGSAEQVAAAIRGFNDLPEDGPIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESM 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +L  R++    R  
Sbjct: 239 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRSELMQEVASLARRVSVCWQRGQ 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + + N L +  +ALP +   L+  R RLD     L   L+      +R F     ++   
Sbjct: 299 ESRRNELRAAARALPGASDLLAIPRQRLDAASSSLPRALKTNTHVHFRQFAAASAKLTLR 358

Query: 361 FLIHNIQKNRQHILEKQQHI----EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
            L   I +    ++   + +      ++ +             A      +  +  I   
Sbjct: 359 VLHGQISQADHRLVVSSERLSLSARALLHRRRERFEALDARFKASRQAYAQAKRQAIARE 418

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
               ++L  R    L+  I           ++L + +Y++ L RG+  ++D   + + Q 
Sbjct: 419 RDRAERLADRASRALATSILRLRARTDHAGQLLSALSYRSVLARGFALVRDEAGHPLHQA 478

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL-------HNNKREKQGTQGELF 529
             + +   + I F DG+  A     +P         +           +      QG LF
Sbjct: 479 AGIESGAALSIEFADGRVAATAGAGSPLPTSAPAAPKPVRESKPAAAKRTPDPADQGSLF 538


>gi|85717179|ref|ZP_01048137.1| exodeoxyribonuclease VII large subunit [Nitrobacter sp. Nb-311A]
 gi|85696012|gb|EAQ33912.1| exodeoxyribonuclease VII large subunit [Nitrobacter sp. Nb-311A]
          Length = 541

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 209/541 (38%), Positives = 305/541 (56%), Gaps = 12/541 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M     +   + PEY+VSELS  LK  VE+   HV VRGEISG+RG H+SGH YF+LKD 
Sbjct: 1   MPANPAQLLANSPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHASGHCYFALKDE 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  +
Sbjct: 61  SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RKKKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+
Sbjct: 121 EERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   ++IA AI   N   +G   PRPD++I+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 181 VQGEGSAEQIAAAIDGFNARPDGGPVPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAASM 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + NL AR      R  
Sbjct: 241 IPLISAVGHETDVTLIDFAADQRAPTPTAAAEMAVPVRSDLLVEVSNLAARALVAWKRGH 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L S  +ALP + + L+  R +LD     L   L       +R F  I + +   
Sbjct: 301 DDRRTELRSSARALPGAFELLAIPRQKLDNAAAALPRALRASTHVHHRRFTQISSGLTLR 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYL 416
            L   +   +Q +      +    +  LR+         A L   R    +  + +I   
Sbjct: 361 VLRAQVAHAKQSVAATGARLTHCTQVVLRHRRDRFAGLAARLKASRLANVQAQREQISRA 420

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
               ++L  R    +   ++     ++ ++++L + +Y+  L RG+  ++D   + +   
Sbjct: 421 EERTRRLFERAHRAVVTSLQRHEARIAHSSQLLAAVSYRGVLARGFALVRDETGHALRSA 480

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQP--------TKKCQLHNNKREKQGTQGEL 528
             + + TR+ + F DGQ NA                    +        +R K   QG L
Sbjct: 481 AAVGSGTRLTLEFIDGQVNATSDTDQTAPAASSTTESNPGSPPRPASGKRRAKIADQGSL 540

Query: 529 F 529
           F
Sbjct: 541 F 541


>gi|13475744|ref|NP_107311.1| exodeoxyribonuclease VII large subunit [Mesorhizobium loti
           MAFF303099]
 gi|22095676|sp|Q987V3|EX7L_RHILO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|14026500|dbj|BAB53097.1| exodeoxyribonuclease VII large subunit [Mesorhizobium loti
           MAFF303099]
          Length = 521

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 211/529 (39%), Positives = 314/529 (59%), Gaps = 8/529 (1%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  + ++  +  EY+VSE+S  LK  VE    +V VRGEISGYRG HSSGHAYF+LKD+
Sbjct: 1   MSEAASESRTNATEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +R+DA++WKGT+++++F PEEG+E +  GK+TT+PG S YQI+I++L P+G+G L+  L
Sbjct: 61  RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K  +PF+P+ I V+TSPTG+VIRDI+ RI  RFPL V+++PV+
Sbjct: 121 EERKRRLQAEGLFDAGRKRRLPFMPRTIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    E+ NA+   N L    +  RPD++I+ARGGGS+EDLW FNDE + RA+A S 
Sbjct: 181 VQGDTASAEVTNAVTGFNALAWDGSIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETDWTL D  AD+RAPTPTGAAE+AVPVK  L+++L +L ARL   ++R  
Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + K     +  +ALP+ DQ L+  R RLD     L   L + + RK         R+   
Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLSVSVDRKRARLQG--QRLTPA 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   I + R          +      +R            L       + ++      +
Sbjct: 359 TLSRRINEARTLTGRDLARAQAAFFAIVRERRARFARTATRLSPAPIARRQKLQA--DTL 416

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R + ++S +++     +S   R+L + ++K  L RG+  +++ +   I Q  ++ 
Sbjct: 417 AALARRQDRVISLRLERLRGQLSQAERLLTTLSHKAVLARGFALVKNADGAVIKQAADVV 476

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           +   + + F DG A+A+  + A       K     + K ++ G QG LF
Sbjct: 477 SGMALTLEFADGTADAVATSGAA----RPKPAAKPSTKAKEPGNQGSLF 521


>gi|92118640|ref|YP_578369.1| exodeoxyribonuclease VII large subunit [Nitrobacter hamburgensis
           X14]
 gi|91801534|gb|ABE63909.1| Exodeoxyribonuclease VII large subunit [Nitrobacter hamburgensis
           X14]
          Length = 541

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 214/542 (39%), Positives = 313/542 (57%), Gaps = 14/542 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M     +   + PEY+VSELS  LK  VE+   HV VRGEISG+RG H SGH YF+LKD 
Sbjct: 1   MPANPAQLLANAPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHGSGHCYFALKDE 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +
Sbjct: 61  SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGIGALMALM 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RKKKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+
Sbjct: 121 EERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   ++IA AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A+S 
Sbjct: 181 VQGEGSAEQIAAAIDGFNALPEGGHVPRPDLLIVARGGGSLEDLWSFNEEIVVRAAASSM 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   +    AR      R  
Sbjct: 241 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRTELFVEVSGFAARAIVAWRRGH 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L S  +ALP + + L+  R +LD +   L   L       +R F  I   +   
Sbjct: 301 DDRRTELRSAARALPGAGELLAIPRQKLDGVAAALPRVLRASTHLHHRRFTEISRGLTLR 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            L   +   +Q +      +       +  +  R++ L  + K + L   + Q ++RI  
Sbjct: 361 VLRAQVAHAKQSVAATGARLAHGTQVVLRHRRDRFVGLAIRLKASRLANAQAQ-RDRIAR 419

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
            +   ++L  R    L+  ++     ++ + ++L +F+Y+  L RG+  ++D     +  
Sbjct: 420 ANERTQRLAERTRRALATLLQRHEARITYSGQLLAAFSYRGVLARGFALVRDDAGQALRS 479

Query: 476 KRNLATKTRILINFFDGQANAI-------VINKAPPKEQPTKKCQLHNNKR-EKQGTQGE 527
              +    R+ + F DG+  A          + AP    P  + +  + KR  K   QG 
Sbjct: 480 ASAVGPGARLTLEFTDGRVAATADDDQSAATSSAPTGSNPRGRPKPASGKRAAKAADQGS 539

Query: 528 LF 529
           LF
Sbjct: 540 LF 541


>gi|316932705|ref|YP_004107687.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           DX-1]
 gi|315600419|gb|ADU42954.1| exodeoxyribonuclease VII, large subunit [Rhodopseudomonas palustris
           DX-1]
          Length = 537

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 205/532 (38%), Positives = 302/532 (56%), Gaps = 7/532 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           S +   +  E++VSELS  LK  VE    HV VRGEI+G+RG HSSGH YF+LKD  ++I
Sbjct: 6   SPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E+RK
Sbjct: 66  EAVIWKGVAGRMRFRPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           KKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+VQG+
Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              +++A AI   N L E    PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I
Sbjct: 186 GSAEQVAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   +  L  R+ +   R   ++ 
Sbjct: 246 SAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGGLARRMLSSWQRGQDFRR 305

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           N L +  +ALP +   L+  R RLD     L   L       +R F      +    L  
Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDTAAASLPRALRANTHAHHRRFAAAAAGMTLKVLRA 365

Query: 365 NIQKNRQHIL---EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420
            +  +   +     + Q   +   +H R  F     ++    +  +Q +  RI      +
Sbjct: 366 QVAHSAHRLDVSGTQLQRCARATLRHRRDRFEGLAVRLQASRLANQQAQRMRIAGEQERL 425

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++L  R    L+  ++     +  T ++L + +Y+  L RG+  ++D     +    ++A
Sbjct: 426 QRLAERARRALATLLERRQARLDATGKLLTALSYRGVLARGFALVRDAEGRSVHTAASVA 485

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK---CQLHNNKREKQGTQGELF 529
              R+ + F DG+        +       K          +  K   QG LF
Sbjct: 486 AGARLSVEFADGRLGVTADGGSGSPAHTAKPASVPAKAAKRLVKPAGQGSLF 537


>gi|325291705|ref|YP_004277569.1| exodeoxyribonuclease VII large subunit [Agrobacterium sp. H13-3]
 gi|325059558|gb|ADY63249.1| exodeoxyribonuclease VII large subunit [Agrobacterium sp. H13-3]
          Length = 534

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 238/534 (44%), Positives = 336/534 (62%), Gaps = 5/534 (0%)

Query: 1   MNP-FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+  FS     +  E+SVSELS  +K  VE+    V VRGEISGYRG HSSGHAYFSLKD
Sbjct: 1   MSDIFSNAALSNLAEFSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +RIDA+IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IESL P+G+G L+  
Sbjct: 61  DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIESLEPAGAGALMAL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE R+++L  EGLF  + K  +PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PV
Sbjct: 121 LEDRRRRLAAEGLFDAERKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+   +E+ANAI   N L+ G    RPD++I+ARGGGS+EDLW FNDE++VRA A S
Sbjct: 181 KVQGEGSGEEVANAIRGFNALQPGGEIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DYAAD+RAPTPTGAAEMAVPV+  L++ L  L ARL+  + R 
Sbjct: 241 EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   + +L++ALP+ DQ L+  R R D     L   LE+    K R F    + ++ 
Sbjct: 301 MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEMTTLNKRRAFERSASGLRP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L++ ++++RQ + E+ Q  E +V++ L           + L  L  +   ++      
Sbjct: 361 EILLNGLRQHRQRVTERMQRAEALVERRLLQAQSRISSTDSALRSLPARLLGQLERQKER 420

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +     R +  + H++    + ++   RILQS +YKN L RGY  I+D  N  +T+   +
Sbjct: 421 VVTATRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI 480

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE----QPTKKCQLHNNKREKQGTQGELF 529
           A+   + + F DG+  A+   +A P          K +         G QG LF
Sbjct: 481 ASGAVVSMEFADGRVAALTTGEATPSSDVQTPAAPKKKPVKPASSDPGNQGSLF 534


>gi|75676737|ref|YP_319158.1| exodeoxyribonuclease VII large subunit [Nitrobacter winogradskyi
           Nb-255]
 gi|74421607|gb|ABA05806.1| Exodeoxyribonuclease VII large subunit [Nitrobacter winogradskyi
           Nb-255]
          Length = 541

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 212/541 (39%), Positives = 309/541 (57%), Gaps = 12/541 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M     +   + PEY+VSELS  LK  VE+   HV VRGEISG+RG H+SGH YF+LKD 
Sbjct: 1   MPANPAQLLANAPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHASGHCYFALKDE 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  +
Sbjct: 61  SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RKKKL  +GLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+
Sbjct: 121 EERKKKLAAQGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   ++IA AI   N L +G   PRPD++I+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 181 VQGEGSAEQIAAAIDGFNALPDGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAGSM 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +L AR      R  
Sbjct: 241 IPLISAVGHETDVTLIDFAADQRAPTPTAAAEMAVPVRSDLAIEISDLAARALVAWKRGH 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L S  +ALP + + L+  R +LD     L   L       +R F  I   +   
Sbjct: 301 DDRRTELRSAARALPGAGELLAIPRQKLDNAAAALPRALRASTHLHHRRFTRISGGLTLR 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYL 416
            L   I   +Q +      +    +  LR+           L   R    +  ++RI   
Sbjct: 361 VLHAQITHAKQSVAATGARLAHCTQVMLRHRRDRFAGLAVRLRASRVANVQAQRDRIARD 420

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
           +   ++L  R    L   ++     ++ + ++L + +Y+  L RG+  ++D     +   
Sbjct: 421 NERTRRLAERARRALVTLLRRHEARITHSGQLLAALSYRGVLARGFALVRDDAGQAVRSA 480

Query: 477 RNLATKTRILINFFDGQANAI-------VINKAPPKEQPTKKCQLHNNKR-EKQGTQGEL 528
               +  R+ + F DG+ N           +  PP+  PT + +  + KR  K   QG L
Sbjct: 481 TAAGSGARLTLEFADGKVNVTSDTDQTAATSSNPPRSGPTSEPKPVSRKRAAKPAGQGSL 540

Query: 529 F 529
           F
Sbjct: 541 F 541


>gi|227824137|ref|YP_002828110.1| exodeoxyribonuclease VII large subunit [Sinorhizobium fredii
           NGR234]
 gi|254783705|sp|C3MCQ9|EX7L_RHISN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|227343139|gb|ACP27357.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium fredii
           NGR234]
          Length = 527

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 230/519 (44%), Positives = 330/519 (63%), Gaps = 3/519 (0%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +  EYSVSELS  +K  +E    HV VRGEISGYRG HSSGHAYF+LKD+ +R++A+IWK
Sbjct: 12  NVAEYSVSELSGSIKRTLEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRARMEAVIWK 71

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           GT  +++  PEEG+E +  G++TTFPGSSKYQI+I+SL P+G+G L+  LE+RK+KL  E
Sbjct: 72  GTFARLKLRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALLEERKRKLAAE 131

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF    K P+PF+PK+I V+TSPTGAVIRDIL RI+ RFP+ V+++PV+VQGD   +E+
Sbjct: 132 GLFDAARKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVVVWPVRVQGDGASEEV 191

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI   N L+EG   PRPD++I+ARGGGS+EDLW FNDE +VRA+A S IP+ISA+GHE
Sbjct: 192 AAAIRGFNALEEGGPIPRPDVLIVARGGGSLEDLWGFNDEAVVRAVAASGIPLISAVGHE 251

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TDWTL DYA+D RAPTPTGAAEMAVPVK  L++ + NL ARL     R + ++ + L +L
Sbjct: 252 TDWTLIDYASDQRAPTPTGAAEMAVPVKADLEAQVANLSARLQAAATRQMDHRRHALRAL 311

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            +ALP+ DQ L+  R R D     L   L++    K R F  I   ++ + L   I++ R
Sbjct: 312 ARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERIAAHLRPELLTTRIREQR 371

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +H+LE     E+ V++ +           A L  L  +   +I      +  L  R +  
Sbjct: 372 RHLLEAINKAERCVERQIDRRQARVSAADASLRTLPSRLAGQIHRSSDRVSGLGRRADAA 431

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++ +++    +++   R+LQS +Y+N L+RG+  ++D   + + Q   +     + + F 
Sbjct: 432 MAAEMRRLKGALAAQDRVLQSLSYRNVLQRGFALVRDAAGDPVKQAAAVTAGMALSLEFA 491

Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           DG+ +A+   +  P   P    +   ++      QG LF
Sbjct: 492 DGRVSAVAGEEGAP---PPAAPKKRASRPVVPTKQGSLF 527


>gi|328545113|ref|YP_004305222.1| exodeoxyribonuclease 7 large subunit [polymorphum gilvum
           SL003B-26A1]
 gi|326414855|gb|ADZ71918.1| Exodeoxyribonuclease 7 large subunit [Polymorphum gilvum
           SL003B-26A1]
          Length = 519

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 205/524 (39%), Positives = 302/524 (57%), Gaps = 6/524 (1%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
                +  EYSVS++S+ +K  +E    +V VRGE+ G      SGH Y  LKD+ S + 
Sbjct: 2   ADTPTNIAEYSVSDISFSIKRTLEDTFGYVRVRGEL-GRISRPGSGHVYLDLKDDRSVLS 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           A+IWKG   K++  PE+G+E +  GKITTFPG SKYQ++I++L P+G+G L+  LE RK+
Sbjct: 61  AVIWKGAAAKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEDRKR 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           KL  EGLF+ + K P+P +P++I V+TSPTGAVIRDIL R+S RFPL V+++PV+VQGD 
Sbjct: 121 KLAAEGLFAAERKRPLPTLPRVIGVVTSPTGAVIRDILHRLSDRFPLHVLVWPVRVQGDS 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
           C  E+AN I   N L+ G   PRPD+II+ARGGGS+EDLW FNDE +VRA A S+IP+IS
Sbjct: 181 CGAEVANGIRGFNALEAGGAIPRPDLIIVARGGGSLEDLWGFNDEQVVRAAAESAIPLIS 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWTL D AAD+RAPTPTGAAE+AVPVK  L + + +L  RL + + RL+  +  
Sbjct: 241 AVGHETDWTLIDLAADVRAPTPTGAAEIAVPVKAELMAGVDDLSRRLASGLNRLVASRRT 300

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +   ALP     L+  R RLD     LE  L +          H    +    L+  
Sbjct: 301 ELRAAAAALPAPRDLLALPRQRLDFSGGNLERGLTVNTRAHRSRLQHAAALLTPMTLVRA 360

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++ R+ +   +Q   +  +  +       +     L   R   + ++      +  L+ 
Sbjct: 361 MRQGRERLDGHRQRQARAWETTIFRHRQRLEAAAGRLTSGR--LEQQLRLGTERLDGLLR 418

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+E     ++      +    ++L++ +YK+ L RGY  ++D     +    +++   R+
Sbjct: 419 RLERAQQARLAEQRARLQGLEKLLKTLSYKDVLARGYALVRDAAGEPVRSAAHVSAGDRL 478

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            +   DG+  AI    A P E+  K  +  +N      +QG LF
Sbjct: 479 SVEVADGRFEAI---AATPAEELRKSRKPKDNPAPGGTSQGSLF 519


>gi|260462651|ref|ZP_05810857.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259031557|gb|EEW32827.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 548

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 217/550 (39%), Positives = 323/550 (58%), Gaps = 23/550 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  + ++  +  EY+VSE+S  LK  VE    +V VRGEISGYRG HSSGHAYF+LKD+
Sbjct: 1   MSDAASESRTNATEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +R+DA++WKGT+++++F PEEG+E +  GK+TT+PG S YQI+I++L P+G+G L+  L
Sbjct: 61  RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K  +PF+P++I V+TSPTG+VIRDI+ RI  RFPL V+++PV+
Sbjct: 121 EERKRRLQGEGLFDAGRKRRLPFMPRVIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    E+ NA+   N L       RPD++I+ARGGGS+EDLW FNDE + RA+A S 
Sbjct: 181 VQGETSGVEVTNAVAGFNALAWDGAIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETDWTL D  AD+RAPTPTGAAE+AVPVK  L+++L +L ARL   ++R  
Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + K     +  +ALP+ DQ L+  R RLD     L   L +   RK   +  +  ++   
Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLMVSTERKRARY--VAVKLTPT 358

Query: 361 FLIHNIQKNR----QHILEKQ--------------QHIEQIVKQHLRYIFLEKKEKIAIL 402
            L   I + R    +++L  Q                    + +  R      ++++A+L
Sbjct: 359 MLSQRIAEARRTNERNLLRAQGALRALARARRAELNRAADQLPKCARASLQRHRQQLALL 418

Query: 403 HML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                 E T  R       +  L  R    +  +++     V    R+L + ++K  L R
Sbjct: 419 QGRITIEPTARRQRVQRDLLTALTRRGGQAMLIRLERLRGRVVQADRLLATLSHKAVLAR 478

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP-PKEQPTKKCQLHNNKR 519
           G+  ++D +   I Q  ++A+   + + F DG A+A+  + A  PK       +    K 
Sbjct: 479 GFALVKDADGAVIKQAADVASGMALSLEFADGIADAVATSGAARPKPAAKPSAKTPVAKT 538

Query: 520 EKQGTQGELF 529
            + G QG LF
Sbjct: 539 REPGNQGSLF 548


>gi|192289762|ref|YP_001990367.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           TIE-1]
 gi|192283511|gb|ACE99891.1| exodeoxyribonuclease VII, large subunit [Rhodopseudomonas palustris
           TIE-1]
          Length = 537

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 204/532 (38%), Positives = 302/532 (56%), Gaps = 7/532 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           + +   +  E++VSELS  LK  VE    HV VRGEI+G+RG HSSGH YF+LKD  ++I
Sbjct: 6   TPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E+RK
Sbjct: 66  EAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           KKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+VQG+
Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              ++IA AI   N L E    PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I
Sbjct: 186 GSAEQIAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+A+D RAPTPT AAEMAVPV+  L   +  L  R+ +   R   ++ 
Sbjct: 246 SAVGHETDVTLIDFASDKRAPTPTAAAEMAVPVRAELFVEVGGLARRILSSWQRGQDFRR 305

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           N L +  +ALP +   L+  R RLD     L   L       +R F      +    L  
Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDGASAALPRALRASTNAHHRRFAAAAAGMTLKVLRA 365

Query: 365 NIQKNRQHILE---KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420
            +  +   +     + Q   +   +H R  F     ++    +  +Q +  RI      +
Sbjct: 366 QVAHSAHRLDSAGTQLQRCARATLRHRRERFDGLAVRLQASKLANQQAQRMRIAREQERL 425

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++L  R    L   ++     V  T ++L + +Y+  L RG+  ++D +   +    ++A
Sbjct: 426 QRLGERARRALITLLERRQARVDATGKLLTALSYRGVLARGFALVRDADGRSVHAAASVA 485

Query: 481 TKTRILINFFDGQANAIVINKAPPK---EQPTKKCQLHNNKREKQGTQGELF 529
              R+ + F DG+        +       +P         +      QG LF
Sbjct: 486 AGARLSVEFADGRVAVTADGGSGSPVEAAKPAPTPAKPAKRPTSPADQGSLF 537


>gi|39934236|ref|NP_946512.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           CGA009]
 gi|39648084|emb|CAE26604.1| putative exonuclease VII, large subunit OB-fold nucleic acid
           binding domain [Rhodopseudomonas palustris CGA009]
          Length = 537

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 205/532 (38%), Positives = 303/532 (56%), Gaps = 7/532 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           + +   +  E++VSELS  LK  VE    HV VRGEI+G+RG HSSGH YF+LKD  ++I
Sbjct: 6   TPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E+RK
Sbjct: 66  EAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           KKL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+VQG+
Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              ++IA AI   N L E    PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I
Sbjct: 186 GSAEQIAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+A+D RAPTPT AAEMAVPV+  L   +  L  R+ +   R   ++ 
Sbjct: 246 SAVGHETDVTLIDFASDKRAPTPTAAAEMAVPVRAELFVEVGGLARRILSSWQRGQDFRR 305

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           N L +  +ALP +   L+  R RLD     L   L       +R F      +    L  
Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDGASAALPRALRASTNAHHRRFAAAAAGMTLKVLRA 365

Query: 365 NIQKNRQHILE---KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420
            +  +   +     + Q   +   +H R  F     ++    +  +Q +  RI      +
Sbjct: 366 QVAHSAHRLDSAGTQLQRCARATLRHRRERFEGLAVRLQASKLANQQAQRMRIAREQERL 425

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++L  R    L   ++     V  T ++L + +Y+  L RG+  ++D +   +    ++A
Sbjct: 426 QRLAERARRALITLLERRQARVDATGKLLTALSYRGVLARGFALVRDADGRSVHAAASVA 485

Query: 481 TKTRILINFFDGQANAIVINKAPPK---EQPTKKCQLHNNKREKQGTQGELF 529
              R+ + F DG+        +       +PT        +      QG LF
Sbjct: 486 AGARLSVEFADGRVAVTADGGSGSPVEAAKPTPAPAKPVKRPPSPAGQGSLF 537


>gi|323138985|ref|ZP_08074045.1| exodeoxyribonuclease VII, large subunit [Methylocystis sp. ATCC
           49242]
 gi|322395739|gb|EFX98280.1| exodeoxyribonuclease VII, large subunit [Methylocystis sp. ATCC
           49242]
          Length = 522

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 200/521 (38%), Positives = 281/521 (53%), Gaps = 20/521 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             + PE SVSEL+  LK  +E     V VRGEIS YRG H+SGHAYFSLKD  +R+DA+I
Sbjct: 22  GTNAPEISVSELANALKRTIEDRFGRVRVRGEISNYRGPHASGHAYFSLKDQSARLDAVI 81

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           WKGT  ++   P+EG+E +  G+ITTFPG S YQI+IE++ P+G G L+  L++R+KKL 
Sbjct: 82  WKGTFMRLRTRPQEGLEVVATGRITTFPGKSSYQIVIEAMEPAGVGALMALLDERRKKLA 141

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLF +  K P+PF+P+++ V+TSPTGAVIRDIL R++ RFP RV+++PV+VQG+    
Sbjct: 142 AEGLFDEARKRPLPFLPRVVGVVTSPTGAVIRDILHRLNDRFPRRVLVWPVRVQGETSAV 201

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A AI   N L      PRPD++I+ARGGGS+EDLW FN+E++VR+ A S IP+ISAIG
Sbjct: 202 EVAAAINGFNALPADGPVPRPDVLIVARGGGSLEDLWSFNEEIVVRSAAASDIPLISAIG 261

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TL D+ ADLRAPTPTGAAE AVPV+  L   L     RL     R ++ +   L 
Sbjct: 262 HETDTTLIDFVADLRAPTPTGAAEKAVPVRAELAEHLAARARRLAAAKTRAMEQRRTQLA 321

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +L + LP  +Q L+  R RLDR    L          +        N +        + +
Sbjct: 322 TLARLLPAPEQLLANPRQRLDRAGERLRGAFRAGRDAQRLRLARAANLLARHSPQAELAR 381

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ +      + Q                   L       + +       +     R++
Sbjct: 382 ARERLKGLDARLAQG------------------LAARLTLARQQNQGSAQRLANAGGRLD 423

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 ++     +    R+  S ++K  L RG+  ++D  +  +         T + I 
Sbjct: 424 RAFVTLLRQKKEKLERLGRLQDSLSHKAVLARGFALVRDEKDALVRGVAQAPPGTALSIE 483

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           F DG+ +A     A     PT        K+     QG LF
Sbjct: 484 FADGRIDAR-AGNAATGPAPTVPAPRKRAKKPGD-DQGSLF 522


>gi|149914435|ref|ZP_01902966.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. AzwK-3b]
 gi|149811954|gb|EDM71787.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. AzwK-3b]
          Length = 530

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/534 (35%), Positives = 290/534 (54%), Gaps = 9/534 (1%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE+SVSE+S  +K ++E   +H+ V+GE+ G      SGH Y  LK
Sbjct: 1   MSDLIDDPMEGENAPEFSVSEISGAVKRVIEGEFAHIRVKGEV-GRVSRPRSGHVYLDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +  +IWKG  +++   PEEG+E +  G++TTFPG S+YQI+IE + P+G G L+ 
Sbjct: 60  DDRSVLAGVIWKGVASRLSVQPEEGMEVVATGRLTTFPGQSRYQIVIEDIKPAGMGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK +L  EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 120 MLEKRKTQLAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+  AI   N L  G   PRPD++I+ARGGGSIEDLW FN+E +VRA A 
Sbjct: 180 VAVQGEKCAPEVTRAIQGFNRLSPGGALPRPDLLIVARGGGSIEDLWGFNEESVVRAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAE+AVPV+  L + +   EAR+ + +  
Sbjct: 240 SEIPLISAVGHETDTTLIDFAADQRAPTPTAAAELAVPVRMDLLAWVDKQEARMTHALTS 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            +  +   L  L +ALP  ++ L   R RLD     L   L   +  +          ++
Sbjct: 300 GVTARGQRLRDLARALPRPERLLDTPRQRLDAWSDRLPAALTRTVQARRVRLFEASGALR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   +   R+  L  +  +   +++ +         ++  L +     +  I     
Sbjct: 360 PGALQSRLASRREMFLSWEARLAPALQRMVDRKRETLDRRLDRLSLRP--IERDIARKSE 417

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + ++  R+      +++     ++   R+ ++  YK TL+RGY  ++  + + +T +  
Sbjct: 418 QLDRVARRLSDAGDRQLRGWRERINAMDRLRETLGYKATLQRGYAVVRG-DGDVVTTRAA 476

Query: 479 LATKTRILINFFDGQ--ANAIVINKAPPKEQPT-KKCQLHNNKREKQGTQGELF 529
                 + I F DG+        + A        K  +    +      QG LF
Sbjct: 477 ALGAQALEIEFADGRMPVGGAPDDGAAQDRTLAEKPVKKPGKRPSDPPDQGSLF 530


>gi|254502889|ref|ZP_05115040.1| exodeoxyribonuclease VII, large subunit [Labrenzia alexandrii
           DFL-11]
 gi|222438960|gb|EEE45639.1| exodeoxyribonuclease VII, large subunit [Labrenzia alexandrii
           DFL-11]
          Length = 540

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 199/524 (37%), Positives = 292/524 (55%), Gaps = 3/524 (0%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
                +  E+SVSE+S+ +K  +E    +V VRGE+ G      SGH Y  LKD+ + + 
Sbjct: 20  ADTPSNVAEFSVSEISFSIKRTMEDAFGYVRVRGEL-GRISRPGSGHIYLDLKDDRAVLS 78

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            +IW+G  +K++  PE+G+E +  GKITTFPG SKYQ++I++L P+G+G L+  LE+RKK
Sbjct: 79  GVIWRGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEERKK 138

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           KL  EGLF+++ K P+P +P +I V+TSPTGAVIRDIL RIS RFP+ V+++PV+VQG+ 
Sbjct: 139 KLAAEGLFAEERKRPLPSLPNVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVRVQGET 198

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+AN I   N  + G T PRPD++I+ARGGGSIEDLW FN+E +VRA A S IP+IS
Sbjct: 199 SGAEVANGIRGFNAFQTGGTIPRPDLVIVARGGGSIEDLWGFNEEAVVRAAAESQIPLIS 258

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWTL D AADLRAPTPTGAAE+AVPVK  L S + +   RL+  + R +  +  
Sbjct: 259 AVGHETDWTLIDLAADLRAPTPTGAAEIAVPVKAELMSMVDDRARRLSTGLQRFVGSRRT 318

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +   ALP     L+  R R D     LE  L +        + +   R+    L   
Sbjct: 319 ELRAASAALPAPRDLLALPRQRFDTAANSLERGLIVNTKHHRSTYQNASARLSPIVLTRL 378

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             K RQ +L      ++ +   +          +A L   R             +  L  
Sbjct: 379 STKARQDLLVAGDRQQRALSVGIAQKRQAFDAIVARLTPSR--LSQHTALSKERVTGLGD 436

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R++     ++K     +    ++L+S +YK+ L RGY  ++D +   I     + T   +
Sbjct: 437 RLDRAYLTQLKDSAAKLDGLQKLLKSLSYKDVLARGYAVVRDADGQPIRSTSAVETGAAL 496

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            +   DG  +A+ ++ +   ++P           +    QG LF
Sbjct: 497 SVELADGTLDAVAMSGSSAPKKPKTTGPKKAASHKPAADQGNLF 540


>gi|315122013|ref|YP_004062502.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495415|gb|ADR52014.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 533

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 379/533 (71%), Positives = 445/533 (83%), Gaps = 4/533 (0%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN   QKNSL  PEYSVSELSYHLK+ VES   +V VRGEISGYRGIH+SGHAYFSLKDN
Sbjct: 1   MNSSPQKNSLTLPEYSVSELSYHLKNTVESKFPYVFVRGEISGYRGIHASGHAYFSLKDN 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            SRIDA+IWKGTL+KIE  PEEGIEFL +GKITTFPGSSKYQIIIESLIPSGSG L+T L
Sbjct: 61  KSRIDAVIWKGTLSKIEHPPEEGIEFLALGKITTFPGSSKYQIIIESLIPSGSGALMTIL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RKKKL EE LFSD++KNPIPF+PK IAVITSPTGAVIRDILQRISCRFP+RVI+FP K
Sbjct: 121 EERKKKLREEELFSDKYKNPIPFMPKNIAVITSPTGAVIRDILQRISCRFPVRVIVFPAK 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGDECP+EI NAI+QLN LKE   CPRPDIIILARGGGSIEDLWHFNDE IVRAIANSS
Sbjct: 181 VQGDECPREIVNAIIQLNGLKEESICPRPDIIILARGGGSIEDLWHFNDETIVRAIANSS 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPIISAIGHETDWTL+DYAADLRAPTPTGAAEMAVPVK  L SSL +LE+RLN+ I+RL 
Sbjct: 241 IPIISAIGHETDWTLSDYAADLRAPTPTGAAEMAVPVKHLLTSSLKSLESRLNHSIVRLT 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           K K+N LNSL+K LPNSDQ LSC RY+LDRL RELEHNLEIIIFRK R+FN+ I RIKSD
Sbjct: 301 KNKVNCLNSLIKILPNSDQILSCPRYQLDRLSRELEHNLEIIIFRKCRYFNNTIIRIKSD 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
             +HNIQK RQ+I++KQ++IE  ++Q+LR I L+ ++K  +LHML EQTK+RI  LH HI
Sbjct: 361 VPMHNIQKYRQNIIKKQEYIEHQIEQYLRCIHLKTQQKGTMLHMLCEQTKSRITRLHAHI 420

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K  I RIE +LS+KI++CHTS+S   RIL+S A++N LKRGY++I+D NNN +T+   L+
Sbjct: 421 KDSINRIELMLSYKIQNCHTSISTPNRILKSLAHRNILKRGYSTIRDLNNNLLTKTNKLS 480

Query: 481 TKTRILINFFDGQANAIVINKA----PPKEQPTKKCQLHNNKREKQGTQGELF 529
             T ILI+FF+GQA+AI+ NK     P +++ T+K + ++ K++    QG LF
Sbjct: 481 AGTNILIDFFEGQASAIITNKNHSVLPIEKKYTRKRKDNSQKKKNHEDQGSLF 533


>gi|294853461|ref|ZP_06794133.1| exodeoxyribonuclease VII [Brucella sp. NVSL 07-0026]
 gi|294819116|gb|EFG36116.1| exodeoxyribonuclease VII [Brucella sp. NVSL 07-0026]
          Length = 513

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 310/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 6   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 66  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     + ++A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 306 QKRQAHRAAVRAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 484 GDALSVRFRDGDVGVV 499


>gi|225686532|ref|YP_002734504.1| exodeoxyribonuclease VII large subunit [Brucella melitensis ATCC
           23457]
 gi|256262331|ref|ZP_05464863.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 2
           str. 63/9]
 gi|254783692|sp|C0RLR7|EX7L_BRUMB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|225642637|gb|ACO02550.1| exodeoxyribonuclease VII, large subunit [Brucella melitensis ATCC
           23457]
 gi|263092059|gb|EEZ16356.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 2
           str. 63/9]
 gi|326410913|gb|ADZ67977.1| exodeoxyribonuclease VII large subunit [Brucella melitensis M28]
 gi|326554204|gb|ADZ88843.1| exodeoxyribonuclease VII large subunit [Brucella melitensis M5-90]
          Length = 511

 Score =  432 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 212/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + I F DG    +
Sbjct: 482 GDALSIRFRDGDVGVV 497


>gi|17988872|ref|NP_541505.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 1
           str. 16M]
 gi|225629238|ref|ZP_03787271.1| exodeoxyribonuclease VII, large subunit [Brucella ceti str. Cudo]
 gi|261216208|ref|ZP_05930489.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str.
           Tulya]
 gi|17984697|gb|AAL53769.1| exodeoxyribonuclease vii large subunit [Brucella melitensis bv. 1
           str. 16M]
 gi|225615734|gb|EEH12783.1| exodeoxyribonuclease VII, large subunit [Brucella ceti str. Cudo]
 gi|260917815|gb|EEX84676.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str.
           Tulya]
          Length = 513

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 6   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 66  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 484 GDALSVRFRDGDVGVV 499


>gi|254695790|ref|ZP_05157618.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str.
           Tulya]
 gi|254705758|ref|ZP_05167586.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis
           M163/99/10]
 gi|254710990|ref|ZP_05172801.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis
           B2/94]
 gi|256029372|ref|ZP_05442986.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis
           M292/94/1]
 gi|256043639|ref|ZP_05446564.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256111324|ref|ZP_05452350.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 3
           str. Ether]
 gi|256157564|ref|ZP_05455482.1| exodeoxyribonuclease VII large subunit [Brucella ceti M490/95/1]
 gi|256253461|ref|ZP_05458997.1| exodeoxyribonuclease VII large subunit [Brucella ceti B1/94]
 gi|260167540|ref|ZP_05754351.1| exodeoxyribonuclease VII large subunit [Brucella sp. F5/99]
 gi|260564829|ref|ZP_05835314.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1
           str. 16M]
 gi|261220588|ref|ZP_05934869.1| exodeoxyribonuclease 7 large subunit [Brucella ceti B1/94]
 gi|261313179|ref|ZP_05952376.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis
           M163/99/10]
 gi|261318571|ref|ZP_05957768.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis B2/94]
 gi|261756959|ref|ZP_06000668.1| exodeoxyribonuclease 7 large subunit [Brucella sp. F5/99]
 gi|265986371|ref|ZP_06098928.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis
           M292/94/1]
 gi|265990059|ref|ZP_06102616.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265992830|ref|ZP_06105387.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 3
           str. Ether]
 gi|265996065|ref|ZP_06108622.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M490/95/1]
 gi|31563442|sp|Q8YCK1|EX7L_BRUME RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|260152472|gb|EEW87565.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1
           str. 16M]
 gi|260919172|gb|EEX85825.1| exodeoxyribonuclease 7 large subunit [Brucella ceti B1/94]
 gi|261297794|gb|EEY01291.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis B2/94]
 gi|261302205|gb|EEY05702.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis
           M163/99/10]
 gi|261736943|gb|EEY24939.1| exodeoxyribonuclease 7 large subunit [Brucella sp. F5/99]
 gi|262550362|gb|EEZ06523.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M490/95/1]
 gi|262763700|gb|EEZ09732.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 3
           str. Ether]
 gi|263000728|gb|EEZ13418.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264658568|gb|EEZ28829.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis
           M292/94/1]
          Length = 511

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|161620822|ref|YP_001594708.1| exodeoxyribonuclease VII large subunit [Brucella canis ATCC 23365]
 gi|254703100|ref|ZP_05164928.1| exodeoxyribonuclease VII large subunit [Brucella suis bv. 3 str.
           686]
 gi|260567971|ref|ZP_05838440.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 4 str. 40]
 gi|261753717|ref|ZP_05997426.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 3 str. 686]
 gi|189037854|sp|A9MC50|EX7L_BRUC2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|161337633|gb|ABX63937.1| exodeoxyribonuclease VII, large subunit [Brucella canis ATCC 23365]
 gi|260154636|gb|EEW89717.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 4 str. 40]
 gi|261743470|gb|EEY31396.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 3 str. 686]
          Length = 511

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERQTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|62317398|ref|YP_223251.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|83269378|ref|YP_418669.1| exodeoxyribonuclease VII large subunit [Brucella melitensis biovar
           Abortus 2308]
 gi|189022653|ref|YP_001932394.1| exodeoxyribonuclease VII large subunit [Brucella abortus S19]
 gi|254690900|ref|ZP_05154154.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str.
           870]
 gi|254698681|ref|ZP_05160509.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732128|ref|ZP_05190706.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str.
           292]
 gi|256256085|ref|ZP_05461621.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 9 str.
           C68]
 gi|260544636|ref|ZP_05820457.1| exonuclease VII [Brucella abortus NCTC 8038]
 gi|260882304|ref|ZP_05893918.1| exodeoxyribonuclease 7 large subunit [Brucella abortus bv. 9 str.
           C68]
 gi|297249439|ref|ZP_06933140.1| exodeoxyribonuclease VII, large subunit [Brucella abortus bv. 5
           str. B3196]
 gi|81309307|sp|Q578P4|EX7L_BRUAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|123546037|sp|Q2YL15|EX7L_BRUA2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694639|sp|B2SAR1|EX7L_BRUA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|62197591|gb|AAX75890.1| XseA, exodeoxyribonuclease VII, large subunit [Brucella abortus bv.
           1 str. 9-941]
 gi|82939652|emb|CAJ12641.1| Exonuclease VII, large subunit:OB-fold nucleic acid binding domain
           [Brucella melitensis biovar Abortus 2308]
 gi|189021227|gb|ACD73948.1| Exonuclease VII, large subunit [Brucella abortus S19]
 gi|260097907|gb|EEW81781.1| exonuclease VII [Brucella abortus NCTC 8038]
 gi|260871832|gb|EEX78901.1| exodeoxyribonuclease 7 large subunit [Brucella abortus bv. 9 str.
           C68]
 gi|297173308|gb|EFH32672.1| exodeoxyribonuclease VII, large subunit [Brucella abortus bv. 5
           str. B3196]
          Length = 511

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|237816952|ref|ZP_04595944.1| exodeoxyribonuclease VII, large subunit [Brucella abortus str. 2308
           A]
 gi|260756483|ref|ZP_05868831.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str.
           870]
 gi|260759915|ref|ZP_05872263.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str.
           292]
 gi|260763153|ref|ZP_05875485.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str.
           86/8/59]
 gi|237787765|gb|EEP61981.1| exodeoxyribonuclease VII, large subunit [Brucella abortus str. 2308
           A]
 gi|260670233|gb|EEX57173.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str.
           292]
 gi|260673574|gb|EEX60395.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676591|gb|EEX63412.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str.
           870]
          Length = 513

 Score =  431 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 6   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 66  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 126 ERKQRLAAEGLFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 484 GDALSVRFRDGDVGVV 499


>gi|83309311|ref|YP_419575.1| exonuclease VII large subunit [Magnetospirillum magneticum AMB-1]
 gi|82944152|dbj|BAE49016.1| Exonuclease VII large subunit [Magnetospirillum magneticum AMB-1]
          Length = 688

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 194/528 (36%), Positives = 296/528 (56%), Gaps = 26/528 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  ++    + PEYSVSELS  L+  VE   S V VRGEISG++  HSSGH YF+LKD 
Sbjct: 186 MSDEARPAPSNVPEYSVSELSGSLRKTVEDAFSFVRVRGEISGFK-RHSSGHLYFALKDA 244

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +DA+ W+G+  K+   PE+G+E +  G++TT+PG SKYQ+++E +  +G G LL  L
Sbjct: 245 DAVLDAVCWRGSAGKLAIGPEDGMEVVATGRLTTYPGRSKYQMVVERMELAGQGALLKML 304

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E RKK+L+ EGLF    K PIPF+P++I V+TSPTGAVIRDIL R++ RFP RV+++PV 
Sbjct: 305 EDRKKRLMAEGLFDTAKKRPIPFLPEVIGVVTSPTGAVIRDILHRLAERFPRRVLLWPVA 364

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    ++A AI   N LK G   PRPD++I+ARGGGS+EDL  FN+E++VRA A S 
Sbjct: 365 VQGDGASAQVAAAIRGFNALKPGGAVPRPDVLIVARGGGSLEDLMAFNEEIVVRAAAESE 424

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+  L +++ ++ ARL   + R +
Sbjct: 425 IPLISAVGHETDTTLIDFASDLRAPTPTAAAEKAVPVRAELIATVADMGARLIGAMQRGL 484

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L    +ALP+  + +     RLD     L +   +++ R+    + +  R++  
Sbjct: 485 EERRTRLGHTFRALPHPRRVMEDCARRLDERAERLTNAPRLLLERRRAELDRLAARLR-- 542

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + +    +      ++  +K          + +                     +
Sbjct: 543 HPREQLAEAGHKLTALTTRLDHAMKTVSAAERAANERRTL------------------QL 584

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++   R+   +   +      V+   ++L+SF+Y+  L+RG+  ++D +   +T      
Sbjct: 585 EQCAGRLIQAMPRLLDEKAKRVAHAGQLLESFSYRKVLERGFAVVRDEHGTPVTSVAAAK 644

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
               + + F DG+A   V   A P        + H       G QG L
Sbjct: 645 PGAALAVEFADGKAGVRVEGTAAP-----PAPKPHRKPATPDGRQGSL 687


>gi|254699977|ref|ZP_05161805.1| exodeoxyribonuclease VII large subunit [Brucella suis bv. 5 str.
           513]
          Length = 511

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAVSRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|261750459|ref|ZP_05994168.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 5 str. 513]
 gi|261740212|gb|EEY28138.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 5 str. 513]
          Length = 513

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 6   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 66  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAVSRLTRALFVNTQKKRVHFDGHARQLSPRL 365

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 484 GDALSVRFRDGDVGVV 499


>gi|256015528|ref|YP_003105537.1| exodeoxyribonuclease VII large subunit [Brucella microti CCM 4915]
 gi|255998188|gb|ACU49875.1| exodeoxyribonuclease VII large subunit [Brucella microti CCM 4915]
          Length = 511

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|306845981|ref|ZP_07478548.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO1]
 gi|306273616|gb|EFM55461.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO1]
          Length = 511

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 208/496 (41%), Positives = 306/496 (61%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEIS YRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISDYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G++ ++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   N L +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVAMAVNGFNALPDHGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ++L +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|90426092|ref|YP_534462.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisB18]
 gi|90108106|gb|ABD90143.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisB18]
          Length = 541

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 206/543 (37%), Positives = 306/543 (56%), Gaps = 16/543 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M P +     + PE++V+ELS  LK  VE    HV VRGEISG+RG HSSGH YF+LKD 
Sbjct: 1   MPPTTAALP-NSPEFTVTELSSALKRTVEDAYGHVRVRGEISGFRGPHSSGHCYFALKDE 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  +
Sbjct: 60  GAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK+KL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PVK
Sbjct: 120 EERKRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLQDRFPRRVLVWPVK 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD   ++IA AI   N L EG + PRPD++I+ARGGGS+EDLW FN+E++VRA A+S 
Sbjct: 180 VQGDGSAEQIAAAIHGFNALPEGGSIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSM 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   +  L  R      R  
Sbjct: 240 IPLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGQLGHRAMLCFQRGQ 299

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + + + L +  +ALP++   L+  R RLD     L   L       +R F      +   
Sbjct: 300 ERRRSELRAATRALPSAAALLAIPRQRLDGAAAALPRALRANSHAHHRRFATACAGLTLK 359

Query: 361 FLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            L   +    Q +    + ++      +  +  R+  L+ + K + L  ++ Q +  +  
Sbjct: 360 VLRAQVAHATQRLAVNGERLKHCARAGLRHRRDRFAALDARFKASKLANVQAQ-RKALAR 418

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                ++L  R    L   ++     V+   ++L + +Y+  L RG+  ++D     +  
Sbjct: 419 DRERTQRLAERARRALLIALQRQQARVASCGQLLGALSYRGVLARGFALVRDAQGLAVHA 478

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP---------TKKCQLHNNKREKQGTQG 526
              +    R+ + F DG+  A    ++    +                   +  K   QG
Sbjct: 479 AAAIDPGARLSLEFADGRIGATADGESAAAPRSKPAAKPATAKPASTTTAKRVSKSVDQG 538

Query: 527 ELF 529
            LF
Sbjct: 539 SLF 541


>gi|256059060|ref|ZP_05449269.1| exodeoxyribonuclease VII large subunit [Brucella neotomae 5K33]
 gi|261323005|ref|ZP_05962202.1| exodeoxyribonuclease 7 large subunit [Brucella neotomae 5K33]
 gi|261298985|gb|EEY02482.1| exodeoxyribonuclease 7 large subunit [Brucella neotomae 5K33]
          Length = 511

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGLIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|163844893|ref|YP_001622548.1| exodeoxyribonuclease VII large subunit [Brucella suis ATCC 23445]
 gi|189037853|sp|A9WZ60|EX7L_BRUSI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|163675616|gb|ABY39726.1| exodeoxyribonuclease VII, large subunit [Brucella suis ATCC 23445]
          Length = 511

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 210/496 (42%), Positives = 308/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +     RPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPILRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|23500501|ref|NP_699941.1| exodeoxyribonuclease VII large subunit [Brucella suis 1330]
 gi|31563165|sp|Q8FVR1|EX7L_BRUSU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|23464131|gb|AAN33946.1| exodeoxyribonuclease VII, large subunit [Brucella suis 1330]
          Length = 511

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 308/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   +  
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVLP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|254720127|ref|ZP_05181938.1| exodeoxyribonuclease VII large subunit [Brucella sp. 83/13]
 gi|265985133|ref|ZP_06097868.1| exodeoxyribonuclease 7 large subunit [Brucella sp. 83/13]
 gi|306839035|ref|ZP_07471855.1| exodeoxyribonuclease VII, large subunit [Brucella sp. NF 2653]
 gi|264663725|gb|EEZ33986.1| exodeoxyribonuclease 7 large subunit [Brucella sp. 83/13]
 gi|306405858|gb|EFM62117.1| exodeoxyribonuclease VII, large subunit [Brucella sp. NF 2653]
          Length = 511

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 209/496 (42%), Positives = 307/496 (61%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G++ ++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PL VI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLGVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   N L +  + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNALPDDGSIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ++L +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++   F
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRF 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++ + +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMSTLSYESVLERGFAVVFDAQGKPVKQAGAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GDALSVRFRDGDVGVV 497


>gi|91978566|ref|YP_571225.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisB5]
 gi|91685022|gb|ABE41324.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisB5]
          Length = 536

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 205/532 (38%), Positives = 308/532 (57%), Gaps = 6/532 (1%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + +   +  E++VSELS  LK  VE +  HV VRGEISG+RG HSSGH YF+LKD  ++
Sbjct: 5   LAPETLANVGEFTVSELSQALKRTVEDSYGHVRVRGEISGFRGAHSSGHCYFALKDESAK 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E+R
Sbjct: 65  IEAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           KKKL  EGLF +  K  +P++P +I V+TSPTGAVIRDIL R+  RFP RV+++PVKVQG
Sbjct: 125 KKKLGAEGLFDEARKQLLPWLPDVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +++A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+
Sbjct: 185 EGSAEQVAAAIHGFNALPEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAESMIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +   R+     R    +
Sbjct: 245 ISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVQSFSRRMMLCWTRGQDSR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            N L +  +ALP + + L+  R RLD     L   L       +R F      I  + L 
Sbjct: 305 RNELRAAARALPAASELLAIPRQRLDTAAAGLPRALRANTHAHHRRFAKAAAGITLNVLR 364

Query: 364 HNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTH 419
             +  + Q +    + ++   +   +H R  F     ++    +  EQ +  +I      
Sbjct: 365 AQVSHSAQRLGITGERLKHGARATLRHRRDRFDGLAIRLQASKLANEQAQRMQIARERER 424

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +++L  R    L+  +      ++ + ++L + +Y+  L RG+  ++D + + +     +
Sbjct: 425 MQRLAERARRALTTLLDRQQARLTQSGKLLTALSYRGVLARGFALVRDADGHAVHAAAAV 484

Query: 480 ATKTRILINFFDGQANAIVINKAP--PKEQPTKKCQLHNNKREKQGTQGELF 529
           +   ++ + F DG+ +          P +  T   +    +  K   QG LF
Sbjct: 485 SAGAQLSVEFADGRVSVTADGGHAGEPAKPTTPASKPTQKRTPKPVDQGSLF 536


>gi|254712538|ref|ZP_05174349.1| exodeoxyribonuclease VII large subunit [Brucella ceti M644/93/1]
 gi|254715610|ref|ZP_05177421.1| exodeoxyribonuclease VII large subunit [Brucella ceti M13/05/1]
 gi|261217358|ref|ZP_05931639.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M13/05/1]
 gi|261320231|ref|ZP_05959428.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M644/93/1]
 gi|260922447|gb|EEX89015.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M13/05/1]
 gi|261292921|gb|EEX96417.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M644/93/1]
          Length = 511

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 GNALSVRFRDGDVGVV 497


>gi|148557887|ref|YP_001257710.1| exodeoxyribonuclease VII large subunit [Brucella ovis ATCC 25840]
 gi|158513787|sp|A5VV55|EX7L_BRUO2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|148369172|gb|ABQ62044.1| exodeoxyribonuclease VII, large subunit [Brucella ovis ATCC 25840]
          Length = 511

 Score =  428 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +      S +  EYSVSE+S  LK  VE    HV VRGEISGYRG HSSGHAYF+LKD+ 
Sbjct: 4   DSSFPGASSNVAEYSVSEISGALKRTVEDMFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R++A+IW+G+++++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE
Sbjct: 64  ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF    K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V
Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+A A+   NTL +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I
Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK  LQ+SL +  ARL++ + R   
Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K     +  +A+P++DQ L+  R R D     L   L +   +K  HF+    ++    
Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + +  + +    Q + + ++  LR        +   L    E    R     + ++
Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +L  R +  +   I+          R++++ +Y++ L+RG+  + D     + Q   ++ 
Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481

Query: 482 KTRILINFFDGQANAI 497
              + + F DG    +
Sbjct: 482 DDALSVRFRDGDVGVV 497


>gi|126729213|ref|ZP_01745027.1| exodeoxyribonuclease VII, large subunit [Sagittula stellata E-37]
 gi|126710203|gb|EBA09255.1| exodeoxyribonuclease VII, large subunit [Sagittula stellata E-37]
          Length = 513

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 185/529 (34%), Positives = 289/529 (54%), Gaps = 16/529 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+      + + PE+SVSELS  +K ++E     V VRGE+ G      SGH Y  LKD+
Sbjct: 1   MDLIDDGTNGNTPEFSVSELSGAVKRVIEGEFGFVRVRGEV-GRVSRPRSGHVYLDLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S I  ++WKG  ++++  PEEG+E +  G++TTFPG SKYQI++E + P+G+G L+  L
Sbjct: 60  RSVISGVMWKGVASRLQTQPEEGMEVVATGRLTTFPGQSKYQIVLEDIRPAGAGALMAML 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRK  L  EGLF    K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+I+PV 
Sbjct: 120 EKRKAALAAEGLFDAGRKKPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N  + G T PRPD++I+ARGGGS+EDLW FN+E++ RA A S 
Sbjct: 180 VQGAACAPEVARAIEGFNRFQPGGTLPRPDLLIVARGGGSVEDLWGFNEEVVARAAAASH 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTP+ AAE+AVPV+  L + + +  AR+   +   +
Sbjct: 240 IPLISAVGHETDTTLIDFVSDRRAPTPSAAAELAVPVRMELAAQIRDFGARMTRAMGLRV 299

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +++   L  L +ALP  ++ +   R RLD +   L   L   + R+       +  ++  
Sbjct: 300 EHRGQRLRDLARALPRPEELVEGPRQRLDVMGDRLPAALTRAVDRQRLRLTETVGSLRPA 359

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   +   R  + E+   +   + + ++      + + A L          I      +
Sbjct: 360 ILRRAVSVERGRMDERSARLGPALARAVKVRRDTLEARAARLSP--RAILRDIGTGRERL 417

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L  R++   + +I+     +    R+ ++ +Y+ TL+RG+  +   +   +T +    
Sbjct: 418 DRLSQRLDAAQAARIQDTRQRLEALARLAETLSYRATLERGFAVVWSDSG-VVTSRAAAD 476

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             T + + F DG+             +           + K   QG LF
Sbjct: 477 EATGLEVEFSDGRM------------KLGGAAPARRKAKRKPPEQGSLF 513


>gi|158424009|ref|YP_001525301.1| exodeoxyribonuclease VII large subunit [Azorhizobium caulinodans
           ORS 571]
 gi|172047959|sp|A8I6A9|EX7L_AZOC5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158330898|dbj|BAF88383.1| exodeoxyribonuclease VII large subunit [Azorhizobium caulinodans
           ORS 571]
          Length = 537

 Score =  426 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 199/533 (37%), Positives = 296/533 (55%), Gaps = 7/533 (1%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M    +  + + PE++VSELS+ L+  VE    HV VRGEISGYRG HSSGHAYFS+KD 
Sbjct: 6   MTDLPETRA-NAPEWTVSELSFALRRTVEDAYGHVRVRGEISGYRGPHSSGHAYFSIKDE 64

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +R+DA+IWK    +++  PEEG+E + +GK+TT+PG S YQI+IESL  +G+G ++  L
Sbjct: 65  GARLDAVIWKSAFARLKLRPEEGLEVVAVGKLTTYPGKSGYQIVIESLEFAGAGAIMAML 124

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K  +PF+PK+I V+TSPTGAVIRDIL R+S RFP +VI++PV+
Sbjct: 125 EERKRRLAAEGLFDAARKQELPFLPKVIGVVTSPTGAVIRDILHRLSDRFPRQVIVWPVR 184

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    E+A AI   N L EG   PRPD++I+ARGGGS+EDL  F+DE +VRA A S 
Sbjct: 185 VQGETSAAEVAEAIRGFNALPEGGPIPRPDVLIVARGGGSLEDLLGFSDEAVVRAAAESF 244

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP++SA+GHETD TL D+AAD+RAPTPT AAEM VPV+  L + +     RL+    RL+
Sbjct: 245 IPLVSAVGHETDVTLIDFAADVRAPTPTAAAEMVVPVRADLLAGIDAYGERLSAAPRRLL 304

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +     +L + LP +D  L+  R RLD     L   L          F  +  R  + 
Sbjct: 305 ERRRADFRALARHLPTADALLAVPRQRLDAAGERLPRALRANAAAHRLAFEAVRTRHSAS 364

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYL 416
                + + +  +      ++  +   +           A     R  +       +   
Sbjct: 365 AFRLRLARAQDRVAALGGRLQWGLTGLVSRRSERLSAMTARFGSARAASLRAHVLHLSRC 424

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              +  L TR +  + H ++     ++   ++L++ +Y+  L RG+  ++D     +   
Sbjct: 425 RERLSVLSTRAQRAVRHDLRERTNRLAAMEQLLKALSYRGVLARGFALVRDAQGGAVRAA 484

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             +    R+ + F DG+     + +  P E P         + +    Q  LF
Sbjct: 485 GAVVPGARLELEFADGRLGVQALGEGAPVEPPQAARPSKGARTK--AAQPSLF 535


>gi|114705932|ref|ZP_01438835.1| exodeoxyribonuclease VII large subunit protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538778|gb|EAU41899.1| exodeoxyribonuclease VII large subunit protein [Fulvimarina pelagi
           HTCC2506]
          Length = 532

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 206/532 (38%), Positives = 298/532 (56%), Gaps = 5/532 (0%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+        +  E++VSE+S  LK  VE    HV VRGE+SGYRG HSSGHAYF+LKD+
Sbjct: 1   MSLLDNDPPSNVAEFTVSEISISLKRTVEDAFGHVRVRGEVSGYRGPHSSGHAYFALKDD 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +RIDA+IW+G+ + + F P+EG+E +  G++TT+PGSSKYQI+IE + P+G+G L+  L
Sbjct: 61  KARIDAVIWRGSFSNLAFKPQEGLEIIATGRLTTYPGSSKYQIVIEDIKPAGAGALMALL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           ++R++KL  EGLF+ + K  +PF+P++I V+TSPTGAVIRDI  RI+ RFP+ V+++PVK
Sbjct: 121 DERRRKLEAEGLFAPERKKRLPFLPRVIGVVTSPTGAVIRDIRHRITDRFPVHVLVWPVK 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     +A AI   N  +     PRPD++I+ARGGGS+EDLW FNDE +VRA A+S 
Sbjct: 181 VQGEGSGDAVARAITGFNAFEPDGPIPRPDVLIVARGGGSLEDLWGFNDEAVVRAAADSD 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETDWTL D+ AD RAPTPTGAAE+AVPV+  L + +    AR  N I R +
Sbjct: 241 IPLISAVGHETDWTLIDHVADRRAPTPTGAAEIAVPVRAELLADVAAFHARQGNAISRRL 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    +    +ALP+ D  L+  R RLD     L     +++    + F  +  R+   
Sbjct: 301 DHDRRQVVQTARALPSPDMLLALPRRRLDDAASGLGSQFLLVVSESRQTFGGVAARLSLS 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   I++ R  +       EQ +   L       +   A L  +    K R       +
Sbjct: 361 TLEGAIREKRGSLRHAALEAEQAMAGRLSRQRQLFQRITANLQPIG--LKARSEAARLKL 418

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             +  R +   +   +     +  T R+      K  L+RGYT I+   +  IT    L 
Sbjct: 419 DTVSERFDRARTRLTEDRRERLRQTWRVASGLGPKRVLERGYTIIRGEGDVPITDPALLP 478

Query: 481 TKTRILINFF-DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT--QGELF 529
             T   + F  + +  A+   +A P        +        +    QG LF
Sbjct: 479 PGTAFAVEFAGNNRIGALASGEAAPGSTRPAAPRKRKKATPPEAERAQGSLF 530


>gi|84499997|ref|ZP_00998263.1| exodeoxyribonuclease VII, large subunit [Oceanicola batsensis
           HTCC2597]
 gi|84391931|gb|EAQ04199.1| exodeoxyribonuclease VII, large subunit [Oceanicola batsensis
           HTCC2597]
          Length = 521

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 189/522 (36%), Positives = 292/522 (55%), Gaps = 17/522 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +  E++VSELS  +K  +ES   HV VR E+ G      SGH YF LKD+ + + A+ WK
Sbjct: 14  NAHEFTVSELSGAVKRAIESGFGHVRVRAEV-GRVSRPRSGHMYFDLKDDRAVLSAVSWK 72

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G + +++  PEEG+E +  G++TTFPG SKYQ+I++++ P+G+G L+  LEKRK  L  E
Sbjct: 73  GQVARMQVQPEEGMEVIATGRMTTFPGQSKYQLIVDNVEPAGAGALMALLEKRKAMLRAE 132

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF+ + K P+P++P+++ V+TSP+GAVIRDIL R+  RFP+ V+I+PV VQG  C  E+
Sbjct: 133 GLFAAERKRPLPYLPRVVGVVTSPSGAVIRDILHRLRDRFPVHVLIWPVAVQGQTCAAEV 192

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           + AI   N L      PRPD++I+ARGGGSIEDLW FN+E++ RA A+S IP+ISA+GHE
Sbjct: 193 SRAIAGFNRLSPAGAVPRPDLLIVARGGGSIEDLWGFNEEIVARAAASSEIPLISAVGHE 252

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D+ +D RAPTPT AAE+AVPV+  L   + ++ ARL     + I  +   L+ L
Sbjct: 253 TDTTLIDFVSDRRAPTPTAAAELAVPVRAELTGWVADMRARLIRAQGQAILSRRQRLSDL 312

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            +ALP  ++    +R +LD     L + L   +  +    +     ++   L   I ++R
Sbjct: 313 ARALPRPERLTETARQKLDTWGERLPNALRRGVAARRVALSDCSGALRPGLLRRRIAEDR 372

Query: 371 QHILEKQQHIEQIVK---QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           Q + ++   +   +       R  F     ++    + RE  + R       ++KL  R 
Sbjct: 373 QRVADRGARLPSSMTRNVMQHRRQFETCAARLQPATLRRETLRQR-----EALEKLANRF 427

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                  ++S    ++   R+ ++  Y+ TL RGY  ++D N   +T+K        + I
Sbjct: 428 AEAARRSVESRRDRLATLDRLRETLGYRETLARGYAVVRDGNGAVMTRKAQAEQAESLAI 487

Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            F DG  +            P  + +    ++E    QG LF
Sbjct: 488 EFADGTLD--------QGASPAPRKKPSAGRKEPPPEQGSLF 521


>gi|84686140|ref|ZP_01014035.1| Exonuclease VII, large subunit [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665667|gb|EAQ12142.1| Exonuclease VII, large subunit [Rhodobacterales bacterium HTCC2654]
          Length = 545

 Score =  423 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 202/532 (37%), Positives = 293/532 (55%), Gaps = 14/532 (2%)

Query: 3   PFSQ-----KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57
           P S      +   + PE++VSELS  +K ++E    HV +RGE+ G      SGH Y  L
Sbjct: 23  PMSDLIEDLEPGGNAPEFTVSELSGAVKRMIEGEFGHVRIRGEV-GRVSRPRSGHIYLDL 81

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
           KD+ + I  +IWKG   ++   PEEG+E +  G++TTFPG SKYQI+I+ + P+G+G L+
Sbjct: 82  KDDRAVISGVIWKGVSARLATQPEEGMEVVATGRLTTFPGQSKYQIVIDDIAPAGAGALM 141

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF 177
             LEKRK  L  EGLF+ + K PIP++P+II V+TSP+GAVIRDIL R+  RFP +V+I+
Sbjct: 142 AMLEKRKAALTAEGLFAQERKKPIPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIW 201

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV VQG+ C  E+  AI   N L  G   PRPD+II+ARGGGS+EDLW FN+E +VRA A
Sbjct: 202 PVAVQGERCAPEVTRAIQGFNALTPGGALPRPDLIIVARGGGSVEDLWGFNEESVVRAAA 261

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S IP+ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+  L +    L +RL + + 
Sbjct: 262 ASDIPLISAVGHETDTTLIDYAADRRAPTPTAAAEMAVPVRRELMAYTAELGSRLTSALT 321

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           + I  +   L  L +ALP ++  L   R RLDR    L   L   +  +    N     +
Sbjct: 322 QGITRRAQRLTDLSRALPRAETLLETPRQRLDRAGDRLPAALIAKVRGEEVRLNRASGGL 381

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +   L + +   R+ + ++   +   + + +     E       L   R           
Sbjct: 382 RPSVLTNRVTVLRERVADRAGRLGYALARPVEAGKRELARLSPRLDPARIDEAR--VRKE 439

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
              + L  R+  + + +I+     +    R+  +  Y  TLKRGY  ++  + + +T + 
Sbjct: 440 REFEALCARLSRVGTGQIEGWQKRLDALERMRVTLGYTETLKRGYAVVRG-DGDVVTTRE 498

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             A    + I F DG+ +  VI       +PT K +     +++   QG LF
Sbjct: 499 AAAHAGALEIEFHDGRLD--VIGGGGGSAKPTAKAK---KSKDEPPEQGTLF 545


>gi|118590626|ref|ZP_01548027.1| exodeoxyribonuclease VII large subunit [Stappia aggregata IAM
           12614]
 gi|118436602|gb|EAV43242.1| exodeoxyribonuclease VII large subunit [Stappia aggregata IAM
           12614]
          Length = 520

 Score =  423 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 200/524 (38%), Positives = 301/524 (57%), Gaps = 5/524 (0%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            +   +  E+SVSE+S+ +K  +E    +V VRGE+ G      SGH Y  LKD+ S + 
Sbjct: 2   SETQSNVAEFSVSEISFSIKRTMEEAFGYVRVRGEL-GRISRPGSGHIYLDLKDDRSVLS 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            +IW+G+ +K++  PE+G+E +  GKITTFPG SKYQ++I+SL P+G+G L+  LE+RKK
Sbjct: 61  GVIWRGSASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKK 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           KL  EGLF+++ K P+P +P++I VITSPTGAVIRDIL RIS RFPL V+++PV+VQG+ 
Sbjct: 121 KLAAEGLFAEERKRPLPPLPRVIGVITSPTGAVIRDILHRISDRFPLHVLVWPVRVQGET 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+AN I   N L+ G   PRPD++I+ARGGGSIEDLW FN+E +VRA ++S IP+IS
Sbjct: 181 SGAEVANGIRGFNALQPGGPIPRPDVLIVARGGGSIEDLWGFNEEAVVRAASDSQIPLIS 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWTL D AADLRAPTPTGAAE AVPVK  L + + +   RLN+ ++R +  +  
Sbjct: 241 AVGHETDWTLIDLAADLRAPTPTGAAEFAVPVKAELMAMVDDRSRRLNSGLVRFVTTRRT 300

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +   ALP     L+  R + D L   LE  L +       H+ +   R+    L   
Sbjct: 301 ELRAASAALPAPQDLLALPRQKFDTLASSLERALIVSTRTHRTHYQNFAGRLSPLLLSRL 360

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             K RQ +++  +  ++ ++  +       +     L   R     +       +  L  
Sbjct: 361 TTKARQDLIQASERKQRALQVAVSQKRHSFEALAVRLTPSR--LAQQTTLGTERLSGLGE 418

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+      ++      +    ++L+S +YK+ L RGY  ++D +   +     +A+   +
Sbjct: 419 RLNRAYLARLSQEKARLDGLQKLLKSLSYKDVLARGYAVVRDDSGQPVRSAGAVASGAAL 478

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            I   DG  +A+ ++ +   +    K +     +     QG LF
Sbjct: 479 SIELADGTVDAVALSDSAGPK--PAKAKKQPAGKGPATNQGSLF 520


>gi|159184239|ref|NP_353300.2| exodeoxyribonuclease VII large subunit [Agrobacterium tumefaciens
           str. C58]
 gi|23814089|sp|Q8UIM4|EX7L_AGRT5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|159139567|gb|AAK86085.2| exodeoxyribonuclease VII large subunit [Agrobacterium tumefaciens
           str. C58]
          Length = 532

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 241/532 (45%), Positives = 335/532 (62%), Gaps = 3/532 (0%)

Query: 1   MNP-FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+  FS     +  E+SVSELS  +K  VE+    V VRGEISGYRG HSSGHAYFSLKD
Sbjct: 1   MSDIFSHTALSNLAEFSVSELSGSIKRTVETAFEQVRVRGEISGYRGPHSSGHAYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +RIDA+IWKGT ++++F PEEG+E +  GKITTFPGSSKYQI+IESL P+G+G L+  
Sbjct: 61  DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKITTFPGSSKYQIVIESLEPAGAGALMAL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE R+++L  EGLF    K P+PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PV
Sbjct: 121 LEDRRRRLAAEGLFDSARKRPLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+   +E+ANAI   N LK G    RPD++I+ARGGGS+EDLW FNDE++VRA A S
Sbjct: 181 KVQGEGSGEEVANAIRGFNALKPGGDIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DYAAD+RAPTPTGAAEMAVPV+  L++ L  L ARL+  + R 
Sbjct: 241 EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   + +L++ALP+ DQ L+  R R D     L   LE+    K R F    + ++ 
Sbjct: 301 MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLELTTLNKRRAFERSASGLRP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L++ ++ +RQ I E+    E +V++ L           + L  L  +   ++      
Sbjct: 361 ETLLNGLKHHRQRITERMHRAETLVERRLLQGKGRVDSFDSALRSLPARLLGQLERQKER 420

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +     R +  + H++    + ++   RILQS +YKN L RGY  I+D  N  +T+   +
Sbjct: 421 VVTAARRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI 480

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQ--PTKKCQLHNNKREKQGTQGELF 529
           A+   + + F DG+ +AI   +  P  +     K +         G QG LF
Sbjct: 481 ASGAAVSMEFADGRVSAITTGEGTPAPETAAAPKKKPAKPASSDPGNQGNLF 532


>gi|182678223|ref|YP_001832369.1| exodeoxyribonuclease VII, large subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|259646285|sp|B2IJK8|EX7L_BEII9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|182634106|gb|ACB94880.1| exodeoxyribonuclease VII, large subunit [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 549

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 206/542 (38%), Positives = 304/542 (56%), Gaps = 16/542 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                S + PE +VSELS  LK  +E     V +RGEIS YRG HSSGHAYF LKD ++R
Sbjct: 8   MLPPPSTNSPELTVSELSAALKRTLEDRFGIVRLRGEISNYRGPHSSGHAYFCLKDQNAR 67

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWK T  +++  PEEG+E +  GKITT+ G S YQI++E++ P+G G L+   E R
Sbjct: 68  IDAVIWKTTFMRLKVKPEEGLEVIATGKITTYAGKSSYQIVVEAIEPAGLGALMALFEAR 127

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           +++L  EGLF ++ K  +PF+P +I VITSPTGAVIRDIL RI+ RFP  V+++PV+VQG
Sbjct: 128 RRQLASEGLFDEERKRALPFLPAVIGVITSPTGAVIRDILHRITERFPRPVLLWPVRVQG 187

Query: 184 DECPKEIANAILQLNTLKEGRTCP--RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           +    E++ AI   N L      P  RPD++I+ARGGGS+EDLW FN+E +VRA A SSI
Sbjct: 188 ETAAAEVSAAIEGFNALPVTGQGPLHRPDLLIVARGGGSLEDLWGFNEENVVRAAAASSI 247

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I+AIGHETDWTL DYAADLRAPTPTGAAE AVPV+  L +SL +L+ R      RL++
Sbjct: 248 PLIAAIGHETDWTLIDYAADLRAPTPTGAAEKAVPVRADLLTSLNDLQRRHAGAAYRLLE 307

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            + + L +L +ALP +D  L+  R RLDR    L         ++      + +R+    
Sbjct: 308 RRRSDLRALARALPQADSLLATPRQRLDRTATRLATACLRAQDQRGLVLGRLAHRLSRQA 367

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ----TKNRIFYLH 417
              ++ +  Q +    + + +  +                L     Q     + R+    
Sbjct: 368 PHASLARLGQKLEAFGRGLGRACEIAQERRRQSLLHLGIRLTQNFTQGIRVERERVHGRR 427

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
             +  L  R+   +S  +      ++   ++ +S +Y   L RG+  ++D     + +  
Sbjct: 428 QKLASLDNRLRQAMSLTLSQRQARLANLAQLTRSLSYHAVLARGFALVRDETGQPLRRAA 487

Query: 478 NLATKTRILINFFDG----QANAIVINKAPPKEQPTKKC------QLHNNKREKQGTQGE 527
           ++     + + F DG     A A+V    P   +PT+K          ++++ K+  Q +
Sbjct: 488 DIIENHVLTLEFSDGCRQAVAGALVATDPPVDPKPTRKPVQKSSSPKPSSRKPKKSQQED 547

Query: 528 LF 529
           LF
Sbjct: 548 LF 549


>gi|110632544|ref|YP_672752.1| exodeoxyribonuclease VII large subunit [Mesorhizobium sp. BNC1]
 gi|123354046|sp|Q11LY8|EX7L_MESSB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110283528|gb|ABG61587.1| Exodeoxyribonuclease VII large subunit [Chelativorans sp. BNC1]
          Length = 519

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 225/530 (42%), Positives = 318/530 (60%), Gaps = 12/530 (2%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M    + +S  +  EYSVSE+S+ LK  +E    HV VRGEISG+RG HSSGH YFSLKD
Sbjct: 1   MEEAKKDDSLSNVAEYSVSEISHALKRTIEDTFGHVRVRGEISGFRGAHSSGHCYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +R++A+IWK T  ++ F P+EG+E +  G++TTFPGSSKYQI+IESL P+G+G L+  
Sbjct: 61  ERARMEAVIWKTTFARLRFPPQEGLEVIATGRLTTFPGSSKYQIVIESLEPAGAGALMAL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE+RK+KL  EGLF++  K P+PF+P +I V+TSPTGAVIRDI+ RI+ RFP+ V+++PV
Sbjct: 121 LEERKRKLAAEGLFAESRKRPLPFMPHVIGVVTSPTGAVIRDIIHRITDRFPVHVVVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+    E+A AI   N L+ G T PRPDI+I+ARGGGS+EDLW FNDE +VRA A S
Sbjct: 181 RVQGETTGAEVAAAISGFNALQPGGTIPRPDILIVARGGGSLEDLWGFNDEAVVRAAAAS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETDWTL D AAD RAPTPTGAAE+AVPVK  L++++  L ARL   I R 
Sbjct: 241 AIPLISAVGHETDWTLIDLAADRRAPTPTGAAEVAVPVKAELEANIARLSARLKGAISRC 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +     SL +ALP+ DQ  +  R R D     L   L+     K  H N +   I  
Sbjct: 301 LDRRRQETRSLARALPSPDQLFALPRRRFDEAAGRLGRALQTSTQGKRLHLNAVRVSIA- 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   I + R+   +  + +  + +  +R+         A +      T  RI  L   
Sbjct: 360 -TLDRRIAQARRDANQCGERLPLVYQGLVRHRRARFDRDAARVSP--RVTLQRITTLGER 416

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +K  I R +  +S +++   T      R+ +S +YK+ L+RG+  ++D  +  + +  ++
Sbjct: 417 LKIAIARKDRAVSLRVERARTVYEQAVRLAESLSYKSVLERGFALVRDGEDRPLKRASDV 476

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                + + F DG   AI   K+             +    + G QG LF
Sbjct: 477 KPGETLRLQFADGNIGAISTGKSSNT-------NRKSAPAREPGKQGSLF 519


>gi|114763003|ref|ZP_01442433.1| exodeoxyribonuclease VII, large subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114544327|gb|EAU47335.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. HTCC2601]
          Length = 510

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 192/536 (35%), Positives = 282/536 (52%), Gaps = 33/536 (6%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     ++ + PE+SVSELS  +K  +E    HV V+GE+ G      SGH Y  LKD+
Sbjct: 1   MDLL-DDDTGNTPEFSVSELSGAVKRTIEGEFGHVRVKGEV-GRVSRPRSGHIYLDLKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S I  ++WKG   ++E  PEEG+E +  G++TTFPG SKYQI+IE + P+G G L+  L
Sbjct: 59  RSVISGVVWKGVSARLETQPEEGMEVVATGRLTTFPGQSKYQIVIEDIRPAGLGALMAML 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRK +L  EGLF    K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+I+PV 
Sbjct: 119 EKRKAQLQAEGLFDPARKQPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++ RA A S 
Sbjct: 179 VQGKSCAPEVARAIEGFNALSPGGAMPRPDLLIVARGGGSVEDLWGFNEEIVARAAAASD 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL DY +D RAPTP+ AAE+AVPV+  L        AR+   + + I
Sbjct: 239 IPLISAVGHETDTTLIDYVSDRRAPTPSAAAEIAVPVRMELLGWTGEAGARMTRAMGQRI 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L  L +ALP ++  L   R RLD L   L   L     ++    +     ++  
Sbjct: 299 ELRSQRLRDLSRALPRAETLLDQPRQRLDLLGERLPRGLIRGTEQRRVVLSDAAGALRPS 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   I   R+ +  +   +                             +  +      +
Sbjct: 359 LLSRVIAHGRESLGRRTDRLS------------------------LRPIEREMRQGRERL 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R++   + ++++   ++   TR+L++ +YK TL+RGY  ++   N  +T+K    
Sbjct: 395 ATLTRRLDEAGTRRLETPRGTLDGLTRLLETLSYKGTLQRGYAVVRSGENEILTRKSAAE 454

Query: 481 TKTRILINFFDGQA-------NAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               + I F DG+         +   +      +          K      QG LF
Sbjct: 455 AAASLEIEFADGRLSLGAPGAASAPASAPTSAARSKPAAARQKRKPTDTPDQGSLF 510


>gi|319782228|ref|YP_004141704.1| exodeoxyribonuclease VII large subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168116|gb|ADV11654.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 543

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 216/549 (39%), Positives = 320/549 (58%), Gaps = 26/549 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  + ++  +  EY+VSE+S  LK  VE    +V VRGEISGYRG HSSGHAYF+LKD+
Sbjct: 1   MSEVASESRTNAAEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +R+DA++WKGT+++++F PEEG+E +  GK+TT+PG S YQI+I++L P+G+G L+  L
Sbjct: 61  RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K  +PF+P++I V+TSPTG+VIRDI+ RI  RFPL V+++PV+
Sbjct: 121 EERKRRLQAEGLFDTGRKRLLPFMPRVIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    E+  A+   N L       RPD++I+ARGGGS+EDLW FNDE + RA+A S 
Sbjct: 181 VQGETSGAEVTAAVNGFNALAWDGAIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETDWTL D  AD+RAPTPTGAAE+AVPVK  L+++L +L ARL   ++R  
Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + K     +  +ALP+ DQ L+  R RLD     L   L +   RK   F     ++   
Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLLVSTERKRARF--FAVKLTPA 358

Query: 361 FLIHNIQKNR----QHILEKQ--------------QHIEQIVKQHLRYIFLEKKEKIAIL 402
            L   I + R    +++L  Q                    + +  R      K+++A+L
Sbjct: 359 MLSQRIAEARRTNERNLLRAQGALRAMARARRAELNRAADQLPKCARASLQRHKQQLAML 418

Query: 403 HML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                 E T  R       +  L  R    +  +++     V    R++ S ++K  L R
Sbjct: 419 QGRITIEPTARRQRVQRDLLTALTRRGTQAVVLRLERLRGRVVQADRLMASLSHKAVLAR 478

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520
           G+  ++D +   + Q  ++A+   + + F DG A+A+ I+         K       K +
Sbjct: 479 GFALVRDADGAVVKQAADVASGMALSLEFADGTADAVAISGT----AKPKAVAKPAAKAK 534

Query: 521 KQGTQGELF 529
           + G QG LF
Sbjct: 535 EPGNQGSLF 543


>gi|217976587|ref|YP_002360734.1| exodeoxyribonuclease VII, large subunit [Methylocella silvestris
           BL2]
 gi|217501963|gb|ACK49372.1| exodeoxyribonuclease VII, large subunit [Methylocella silvestris
           BL2]
          Length = 521

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 200/530 (37%), Positives = 283/530 (53%), Gaps = 13/530 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             +  + + PE +VSELS  LK  +E     V +RGEIS YRG HSSGHAYF LKD  +R
Sbjct: 1   MPEPVASNAPELTVSELSNALKRTIEDRFGFVRLRGEISNYRGPHSSGHAYFCLKDAGAR 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IWKG   ++   PEEG+E +  GKITTFPG S YQII+E++ P+G G L+   E+R
Sbjct: 61  IDAVIWKGVFGRLRVKPEEGLEVIATGKITTFPGKSSYQIIVEAIEPAGVGALMALFEER 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           ++KL  EGLF +  K  +PF+P  + VITSPTGAVIRDIL RI  RFP  V+++PV+VQG
Sbjct: 121 RRKLAAEGLFDEARKKALPFLPLRVGVITSPTGAVIRDILHRIKDRFPRHVLVWPVRVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +    E+A AI     L E     RP +II+ARGGGS+EDLW FN+E++VRA+A S+IP+
Sbjct: 181 ETSAAEVAAAIAGFGALPEDGPLARPHVIIVARGGGSLEDLWSFNEEIVVRAVAASAIPL 240

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISAIGHETDWTL D+AADLRAPTPTGAAE AVPV+  L + + +L  R    + RL+  +
Sbjct: 241 ISAIGHETDWTLIDHAADLRAPTPTGAAEKAVPVRLQLIADVADLSRRHAGAMARLLDRR 300

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            +   +L +ALP  ++ L+  R +LD   R   + +                R+      
Sbjct: 301 RSEARALSRALPLPEEILALPRQKLDHAGRRFANAILRAHDHYSLALGRAAQRLARQTPR 360

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYLHTH 419
             + +  + +   QQ +++                   L   R       + R       
Sbjct: 361 ARMARAGEKLAGLQQRMQRSAVIGRERRAAALNSLGERLINARLSRARAEQERTAAARHR 420

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +  L  R+   +  KI +    +    ++ +S  YKN L RG+  ++D   N +     +
Sbjct: 421 LDVLGPRLLRAVHEKIAARRAELRRLDQLRESLGYKNVLARGFALVRDAEGNPLRLAAAI 480

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                + + F DG           P                ++ +QG LF
Sbjct: 481 TDGALLDLQFADG---------HKPAVAGAAPGAPRKTSASRKPSQGSLF 521


>gi|115526606|ref|YP_783517.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisA53]
 gi|115520553|gb|ABJ08537.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           BisA53]
          Length = 546

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 207/546 (37%), Positives = 299/546 (54%), Gaps = 17/546 (3%)

Query: 1   MN-PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ P   +   + PE++V+ELS  LK  VE    HV VRGEI+G+RG HSSGH YFSLKD
Sbjct: 1   MSKPSVSEPLGNSPEFTVTELSSALKRTVEDAYGHVRVRGEITGFRGAHSSGHCYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + ++I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  
Sbjct: 61  DGAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMAL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           +E+RK+KL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV
Sbjct: 121 MEERKRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLQDRFPRRVLVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +++A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S
Sbjct: 181 RVQGEGSAEQVAAAIHGFNALSEGGAIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAES 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   +     R+     R 
Sbjct: 241 MIPLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRAELFVEVSARNRRMMLCWQRG 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            + +   L +  +ALP+    L+    RLD     L   L       +R F      +  
Sbjct: 301 QERRRTELRAATRALPSGGALLAIPTQRLDGAAAALPRALRANTHAHHRRFAQASAGLTL 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH----MLREQTKNRIFY 415
             L   +    Q +      ++   +  LR          A L        +  + RI  
Sbjct: 361 RVLRAQVAHAAQRLDVNGARLKHCARAALRQRRDRFDALAARLKTSKLANAQAQRARIAR 420

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                ++L  R    LS  I+     V+   ++L + +Y+  L RG+  ++D     +  
Sbjct: 421 EQERTQRLTERSRRALSILIERHRARVTHAGQLLGALSYRGVLARGFALVRDAQGAALHA 480

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN------------NKREKQG 523
             ++A    + + F DG+  A       P +  TK                   +  K  
Sbjct: 481 AASVAAGAHLTLEFADGRIGATADADGRPAQASTKATMSARSDAKPAKPAAAVKRVAKPV 540

Query: 524 TQGELF 529
            QG LF
Sbjct: 541 GQGSLF 546


>gi|288958827|ref|YP_003449168.1| exodeoxyribonuclease VII large subunit [Azospirillum sp. B510]
 gi|288911135|dbj|BAI72624.1| exodeoxyribonuclease VII large subunit [Azospirillum sp. B510]
          Length = 578

 Score =  418 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 187/529 (35%), Positives = 289/529 (54%), Gaps = 9/529 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
             +   + PE++V +L+  LK  +E     V VRGEIS  +  HSSGH Y  LKD+ + I
Sbjct: 55  EPRPGSNLPEFTVGDLARRLKRSIEEEFGFVRVRGEISQPK-KHSSGHCYMRLKDDTAVI 113

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +A+ W+GT+ K+   PEEG+E +V G++TT+PG S+YQ+I+ES+  +G G LL  LE+RK
Sbjct: 114 EAVCWRGTMAKLAIRPEEGLEVIVTGRMTTYPGRSQYQLIVESMELAGEGALLKMLEERK 173

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           ++L  EGLF    K PIPF+P +I V+TSPTGAVIRDIL R++ RFP  V+++PV VQG+
Sbjct: 174 RRLTAEGLFDPARKKPIPFLPDVIGVVTSPTGAVIRDILHRLNDRFPRHVLLWPVAVQGE 233

Query: 185 ECPKEIANAILQLNTLKEGRTC----PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
               E+  AI   N ++ G       PRPD+II+ARGGGS+EDL  FN+E +VRA A S+
Sbjct: 234 RAAAEVTAAIEGFNRIQPGGPQGSRVPRPDLIIVARGGGSLEDLMAFNEESVVRAAAASA 293

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+DLRAPTPT AAEMAVPV+  L + +++ E RL     R +
Sbjct: 294 IPLISAVGHETDTTLIDFASDLRAPTPTAAAEMAVPVRGELLAQILDDERRLIACASRAV 353

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             + N +  L + L +    L     RLD     L      ++ R+      +  +++  
Sbjct: 354 ADRRNRVEGLARGLGDPRALLEGHAQRLDDRAERLNLAASALLERRRTRVGELAAKLR-- 411

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + +  Q +  + + ++  ++  +       +     L       +  +      +
Sbjct: 412 HPREKLAQAGQRLASESRALDSALRHAVTTAGGRFERVAGRLSP--TPARAMLAEGERRV 469

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R++   +  +     +++   ++L+S++YK  L RG+  I+D +   +T      
Sbjct: 470 ADLAPRLDRSHAKGVADKAAALASLGQLLESYSYKGVLARGFALIEDRDGRPVTGADQAT 529

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               + I F D    A  I+   PK +   + +    K      QG LF
Sbjct: 530 PGLAVTIVFADDAKVAATIDGGAPKPESKPEKKAEPRKPRPIPVQGSLF 578


>gi|296446110|ref|ZP_06888058.1| exodeoxyribonuclease VII, large subunit [Methylosinus trichosporium
           OB3b]
 gi|296256304|gb|EFH03383.1| exodeoxyribonuclease VII, large subunit [Methylosinus trichosporium
           OB3b]
          Length = 526

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 198/527 (37%), Positives = 282/527 (53%), Gaps = 20/527 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P       + PE SVSEL+  LK  VE    HV VRGEI+ YRG HSSGH YFSLKD ++
Sbjct: 20  PIGAPPQSNVPELSVSELANALKRTVEDRFGHVRVRGEITNYRGPHSSGHVYFSLKDQNA 79

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           R+DA+IWK T  ++   P+EG+E +  GKITTFPG S YQI+I++L P+G+G L+  L++
Sbjct: 80  RLDAVIWKTTFFRLRVKPQEGLEVVATGKITTFPGKSSYQIVIDTLEPAGAGALMALLDE 139

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
           R+K+L  EGLF  + K P+PF+P ++ V+TSPTGAVIRDIL R+  RFP RV+++PV+VQ
Sbjct: 140 RRKRLAAEGLFDAERKRPLPFLPAVVGVVTSPTGAVIRDILHRLLDRFPRRVLVWPVRVQ 199

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C  E+  AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++VRA A S+IP
Sbjct: 200 GESCAAEVTAAIEGFNALPPGGPIPRPDVLIVARGGGSLEDLWGFNEEIVVRAAAASAIP 259

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHETD TL D+ +DLRAPTPTGAAE  VPV+  L      L  RL+    RL+  
Sbjct: 260 LVSAIGHETDTTLIDFVSDLRAPTPTGAAEKCVPVRAELIEQTAVLARRLSGAERRLLDA 319

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
               L SL + LP   Q L     R DR    L   L   +  +    +H+ + +     
Sbjct: 320 HRRHLVSLQRVLPAGPQLLMHPFQRSDRAGERLRAALRRALDARRLRLSHLTHVLARHSP 379

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              + +  + +      + Q +   +                     +         +  
Sbjct: 380 QAELARASERLKGLHARLRQGLSARMALA------------------RREADGAQRRVDH 421

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
              R+       I      +    ++ +   Y++ L RG+  ++D     +   R++   
Sbjct: 422 AEQRLRSAYFRIIADRQARLDRLDQLRRMLGYESVLARGFALVRDEQGTVLRLARDVTPG 481

Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             + I F D    A     APP+     + +   +K    G QG LF
Sbjct: 482 MAMAIQFADSAVRARAEGDAPPEPPAPPRPKRGKDKT--GGGQGTLF 526


>gi|298293951|ref|YP_003695890.1| exodeoxyribonuclease VII large subunit [Starkeya novella DSM 506]
 gi|296930462|gb|ADH91271.1| exodeoxyribonuclease VII, large subunit [Starkeya novella DSM 506]
          Length = 514

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/528 (39%), Positives = 297/528 (56%), Gaps = 18/528 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +  ++    + P+++VSELS  LK  VE    HV VRGEISGYRG HSSGHAYFSLKD +
Sbjct: 3   DTTTESPISNAPDWTVSELSGALKRTVEDAFGHVRVRGEISGYRGPHSSGHAYFSLKDQN 62

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +R+DA++WKG   +++  PEEG+E + IG+ITTFPG S YQI+I+ L  +G+G ++  LE
Sbjct: 63  ARLDAVVWKGVFGRLKVRPEEGLEVVAIGRITTFPGKSSYQIVIDQLEFAGAGAIMAMLE 122

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RK++L  EGLF+ + K   PF+P +I V+TSPTGAVIRDIL R+S RFP  V+++PV+V
Sbjct: 123 ERKRRLAAEGLFAGERKRRPPFLPVVIGVVTSPTGAVIRDILHRLSDRFPRHVLVWPVRV 182

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+  AI   N L  G   PRPD++I+ARGGGS+EDL  F++E +VRA A S+I
Sbjct: 183 QGDTCGAEVTAAIRGFNALTPGGPIPRPDVLIVARGGGSLEDLLGFSEESVVRAAAESAI 242

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL D+AAD+RAPTPT AAEMAVPV+  L + +  L ARL     R + 
Sbjct: 243 PLISAVGHETDVTLIDFAADVRAPTPTAAAEMAVPVRADLIAEVAGLHARLRACFARGLD 302

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   L SL + LP++D  L+  R RLD   + L   L+               R+    
Sbjct: 303 RRATDLRSLSRLLPSADALLALPRQRLDIAGQRLPRALKANAAAHRLALTRAEGRLAPQR 362

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   +++ R+        +                     L       + RI      + 
Sbjct: 363 LAVLVERRRERFELFAGRLSSA------------------LRANANAHRERIDRARERVN 404

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            +  R+   L    +     +    +++Q+ +YK  L RGY  ++D N   +     +A+
Sbjct: 405 GVHARLAPCLRRGHEERARKLRSLEQLMQALSYKGVLARGYALVRDANGEPLHAAAEVAS 464

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + I F DG+ +A+   +  P   P +K          + +Q  LF
Sbjct: 465 GQALEIEFRDGRVSAVATGEGTPPRPPARKPAKPRGALPDEDSQPTLF 512


>gi|300024096|ref|YP_003756707.1| exodeoxyribonuclease VII large subunit [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525917|gb|ADJ24386.1| exodeoxyribonuclease VII, large subunit [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 488

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 190/526 (36%), Positives = 282/526 (53%), Gaps = 49/526 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            +   + PE+SVSELS  +K  +E    +V +RGEISGYRG H+SGH YF+LKD+ ++I+
Sbjct: 10  ARPGANAPEFSVSELSGAIKRALEDGFGYVRLRGEISGYRGPHASGHCYFALKDDRAKIE 69

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           A+IWKG+  ++ F PEEG+E +  GKITTFPGSSKYQI+IE L P+G+G L+  LE+RK+
Sbjct: 70  AVIWKGSFGRLRFKPEEGMEVVAQGKITTFPGSSKYQIVIEQLEPAGAGALMALLEERKR 129

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           K   EGLF +  K P PF+PK++ ++TSPTGAVIRD+L   + RFP  V+++PV+VQG+ 
Sbjct: 130 KFAAEGLFEEARKKPRPFLPKVVGIVTSPTGAVIRDMLHGFNERFPTCVLLWPVRVQGEG 189

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+A AI   N L+ G   PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+IS
Sbjct: 190 SAAEVAAAIRGFNALEIGGKIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESRIPLIS 249

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWTL D  AD RAPTPT AAE AVP    L  +L   + R    I R++     
Sbjct: 250 AVGHETDWTLIDLVADARAPTPTKAAEWAVPKYSELIEALDKFQLRKRTAIRRVLADTRT 309

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +  + LP     ++  R R D + R L   L             +  R+ +  ++  
Sbjct: 310 HLKASSRGLPKLQDLIALPRQRFDAVDRRLSRALLANTRAHGTRLARVSGRLSAQPIVQK 369

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             + R+ +   ++   Q +   +                                     
Sbjct: 370 HSRCRERLDVLERRAGQALINRV------------------------------------- 392

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +  +       +   + +L+S  Y++ L RG+  ++D     + Q R+++    +
Sbjct: 393 ----AVRRR------DLDGKSALLKSLGYQSVLSRGFALVRDETGVTVRQARSVSPGAAL 442

Query: 486 LINFFDGQANAIVINKAP--PKEQPTKKCQLHNNKREKQGTQGELF 529
            + F DG+   +           +     +    K   +G QG LF
Sbjct: 443 SVQFSDGRIGVVADGDPATGTGAESAAGTKPPRQKTRTRGGQGSLF 488


>gi|307941763|ref|ZP_07657118.1| exodeoxyribonuclease VII, large subunit [Roseibium sp. TrichSKD4]
 gi|307775371|gb|EFO34577.1| exodeoxyribonuclease VII, large subunit [Roseibium sp. TrichSKD4]
          Length = 524

 Score =  414 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 202/522 (38%), Positives = 298/522 (57%), Gaps = 5/522 (0%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +  E+SVSE+S+ +K  +E    +V VRGE+ G      SGH Y  LKD  + +  +IW
Sbjct: 6   SNVAEFSVSEISFSIKRAMEDTFGYVRVRGEL-GRISRPGSGHIYLDLKDERAVLSGVIW 64

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G  +K++  PE+G+E +  GKITTFPG SKYQ++I+SL P+G+G L+  LE+RKKKL  
Sbjct: 65  RGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKKKLAA 124

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189
           EGLFS++ K  +P +P++I V+TSPTGAVIRDIL RIS RFPL V+++PV+VQG+    E
Sbjct: 125 EGLFSEERKQRLPHLPRVIGVVTSPTGAVIRDILHRISDRFPLHVLVWPVRVQGETSGAE 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +AN I   N+L+ G   PRPD+I++ARGGGSIEDLW FN+E +VRA A S IP+ISA+GH
Sbjct: 185 VANGIRGFNSLQAGGPIPRPDLIVVARGGGSIEDLWGFNEEAVVRAAAASEIPLISAVGH 244

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETDWTL D AADLRAPTPTGAAE+AVPVK  L + + +L  RL + + R I  +   L +
Sbjct: 245 ETDWTLIDLAADLRAPTPTGAAEIAVPVKAELLALVDDLSRRLYSGLNRSIANRRTELRA 304

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
              ALP     L+  R R D     LE  L +        F+ +  R+    L   +   
Sbjct: 305 AGAALPAPRDLLALPRQRFDTAAGSLERALIVNTRSHRSGFDGVSARLSPLLLTRGLSHA 364

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
              +        + ++  ++          + L   R + ++ +      +K L  R++ 
Sbjct: 365 HDRLTALVDRQSRALQVTVQSKRQTYSAVASRLTPDRLRQQSALGL--ERLKTLSERMDR 422

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
              +++      +    ++L S +YK  L RGY  ++D +   +    ++    +++I  
Sbjct: 423 AYGNRLAQDKARLDGLDKLLNSLSYKEVLSRGYAVVRDKSGTPVRSATDVPAGEKLVIEL 482

Query: 490 FDGQANAIVINK--APPKEQPTKKCQLHNNKREKQGTQGELF 529
            DG  +A+ ++   A   E+   K      K  K  TQG LF
Sbjct: 483 SDGLIDAMAVSANSASKTEKKAPKKPAAKPKNNKPETQGNLF 524


>gi|163737651|ref|ZP_02145068.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis
           BS107]
 gi|161389177|gb|EDQ13529.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis
           BS107]
          Length = 521

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 189/541 (34%), Positives = 283/541 (52%), Gaps = 39/541 (7%)

Query: 2   NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           +P    +   + PE++VSE+S  +K  +E     + V+GE+ G      SGH Y+ +KD+
Sbjct: 7   DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S +    WKG +  +  +PEEG+E +V G++T F G SKY + ++ +  +G G L+  L
Sbjct: 66  RSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++PV 
Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E + RA+ANS 
Sbjct: 186 VQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVARAVANSQ 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L     N  ARL     + +
Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRSAGQAV 305

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   LN L +ALP  D  L   R RLDR+   L   L   + R+    +     ++  
Sbjct: 306 QQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAAALRPS 365

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   +   +  +      +                             +  +   H  I
Sbjct: 366 TLRQLVGARQDRLRNLSSRLT------------------------LRPIQQDLARQHDRI 401

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L  R+E + + ++      +  T R L+  +YK TL+RGY  ++  +   IT+    A
Sbjct: 402 GQLTQRLEAVQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VITRATEAA 460

Query: 481 TKTRILINFFDGQANAIV------INKAPPKEQPTKKCQLHNNK------REKQGTQGEL 528
           T+ R+ I F D + +             PP ++ +      +        +     QG L
Sbjct: 461 TQPRLRIEFADAEIDVTPAEAGGGDGGTPPAKRSSAPKSEASKPGKRPSGKAPPDDQGSL 520

Query: 529 F 529
           F
Sbjct: 521 F 521


>gi|83942803|ref|ZP_00955264.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. EE-36]
 gi|83846896|gb|EAP84772.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. EE-36]
          Length = 511

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 195/530 (36%), Positives = 289/530 (54%), Gaps = 20/530 (3%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+     +   + PE++V+ELS  +K ++E    HV +RGE+ G      SGH Y  LKD
Sbjct: 1   MDLIDDPREGQNSPEFTVTELSGAIKRVIEGEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S I  +IWKG   ++E  PEEG+E +  G+ITTF G SKYQI+IE + P+G G L+  
Sbjct: 60  DSSVISGVIWKGVSARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRK  L  EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+  RFP +V+I+PV
Sbjct: 120 LEKRKAALAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++ RA A S
Sbjct: 180 AVQGAKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEIVARAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L + L   EAR+   + + 
Sbjct: 240 DIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTQALSQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  + +ALP  D  L   R RLD     L   L   + ++  H + I   ++ 
Sbjct: 300 LARRDQRLRDMARALPRPDSLLDGPRQRLDMRGARLGPALTAGVQKRKVHLSDISGALRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  ++Q  ++ +                    +++ +  I     +  +         
Sbjct: 360 ATLRRSLQTEQRRLAALADRFRPEALGR----EQKRRLEGLIARFRPDALEQDRKRKEEA 415

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            + L  R+      + +  H  ++   R+ +  +YK+TL RGY  ++  +   +T K+  
Sbjct: 416 FQSLARRLSDAGQRQTQGWHKQIAGLDRLHEMLSYKSTLARGYAVVRG-DGGVVTTKQAA 474

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + + I F DG+    +   A PK+ P K              QG LF
Sbjct: 475 QDASALEIEFIDGKMK--IGGGAAPKKTPKKAP-----------EQGSLF 511


>gi|221638251|ref|YP_002524513.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           KD131]
 gi|254783706|sp|B9KM14|EX7L_RHOSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|221159032|gb|ACM00012.1| Exodeoxyribonuclease 7 large subunit [Rhodobacter sphaeroides
           KD131]
          Length = 519

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 193/534 (36%), Positives = 283/534 (52%), Gaps = 22/534 (4%)

Query: 1   MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+        S + PE++VSELS  +K ++E     V VRGEI G     +SGH YF LK
Sbjct: 1   MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + + AI WKG   ++   PEEG+E +  G++TTFPG SKYQII+E + P+G+G L+ 
Sbjct: 60  DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+  L  EGLF    K P+P++P++I V+TSP+GAVIRDIL R+  RFP  V+I+P
Sbjct: 120 MLEKRRAALAAEGLFDAARKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L    ARL+     
Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+ +   L  L +ALP  +  ++    R D     L   L   +  +      +   ++
Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   + + +  + ++ + +E  + +         +   A L     +          
Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFEALSARLAPAFARLIAETERATR 419

Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +  L  R++     ++      +    R+ Q+  Y+ TLKRGY  ++  +   +T
Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVVT 478

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            K    T   + I F DG+ +                       +E+   QG L
Sbjct: 479 TKAEAGTAAVLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518


>gi|170747101|ref|YP_001753361.1| exodeoxyribonuclease VII, large subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653623|gb|ACB22678.1| exodeoxyribonuclease VII, large subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 566

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 209/547 (38%), Positives = 295/547 (53%), Gaps = 20/547 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   + + PE+SV EL+  LK  +E    HV +RGEISGYRG H SGHAYFSLKD  +
Sbjct: 18  PPTSVLNANQPEWSVGELAGALKRTLEDAFGHVRLRGEISGYRGQHGSGHAYFSLKDGQA 77

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           RIDA++WKG   ++   P+EG+E +  G+ITTF G S YQI+IESL P+G G  +  LE+
Sbjct: 78  RIDAVVWKGVFGRLRQRPQEGLEVVATGRITTFAGKSSYQIVIESLEPAGLGAWMALLEE 137

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
           RKK+L  EGLF+  HK PIP++P+++ V+TSPTGAVIRDIL R+  RFP  V+++PV+VQ
Sbjct: 138 RKKQLAAEGLFAPDHKRPIPYLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVRVQ 197

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           GD   +E+A AI   N L  G   PRPD++I+ARGGGSIEDLW FN+E +VRA   S+IP
Sbjct: 198 GDGAAEEVAAAIRGFNALPAGGPIPRPDVLIVARGGGSIEDLWAFNEECVVRAAFASAIP 257

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHETD TL DY +D RAPTPTGAAEMAVPV+  L +++ +L AR    + R I  
Sbjct: 258 LISAVGHETDTTLIDYVSDRRAPTPTGAAEMAVPVRADLIATVADLAARGRGAVGRRIDR 317

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             + L +L +ALP++D  L+  R RLD     L   L     R       +++R+     
Sbjct: 318 DRSDLRALGRALPSADALLAAKRQRLDLAEARLAPALAAGASRHRARLQLLLDRMARRSP 377

Query: 363 IHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              +   R  +          +   V++    +    +  +       E+ +        
Sbjct: 378 DVALANARARLARIDHRPLHALRNDVQRKGEALIQLGRRLVVAREASLERARALQARRTD 437

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            +  L  R+    +  I+     +     +L S +Y+  L RGY  ++D     + +   
Sbjct: 438 RLLALSERLAQAGARGIERRRDRLDGLAGLLGSLSYRAVLDRGYVLVRDAAGLPVRRAAA 497

Query: 479 LATKTRILINFFDGQANAIVINKAPP-----KEQPTK-----------KCQLHNNKREKQ 522
            A   R+ + F DG   A+      P       +P K                   R   
Sbjct: 498 AAAAQRLSLQFADGTVTAVPDGTDDPSLPVDPSRPAKPGRRGGAAAPAAPGKRTGTRPAA 557

Query: 523 GTQGELF 529
             QG LF
Sbjct: 558 TRQGSLF 564


>gi|332560275|ref|ZP_08414597.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332277987|gb|EGJ23302.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 519

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 193/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%)

Query: 1   MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+        S + PE++VSELS  +K ++E     V VRGEI G     +SGH YF LK
Sbjct: 1   MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + + AI WKG   ++   PEEG+E +  G++TTFPG SKYQII+E + P+G+G L+ 
Sbjct: 60  DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+  L  EGLF    K+P+PF+P++I V+TSP+GAVIRDIL R+  RFP  V+I+P
Sbjct: 120 MLEKRRAALAAEGLFDAARKHPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L    ARL+     
Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+ +   L  L +ALP  +  ++    R D     L   L   +  +      +   ++
Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   + + +  + ++ + +E  + +             A L     +          
Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERATR 419

Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +  L  R++     ++      +    R+ Q+  Y+ TLKRGY  ++  +   +T
Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            K        + I F DG+ +                       +E+   QG L
Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518


>gi|77462391|ref|YP_351895.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|123757775|sp|Q3J5E0|EX7L_RHOS4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|77386809|gb|ABA77994.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 519

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 193/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%)

Query: 1   MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+        S + PE++VSELS  +K ++E     V VRGEI G     +SGH YF LK
Sbjct: 1   MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + + AI WKG   ++   PEEG+E +  G++TTFPG SKYQII+E + P+G+G L+ 
Sbjct: 60  DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+  L  EGLF    K+P+PF+P++I V+TSP+GAVIRDIL R+  RFP  V+I+P
Sbjct: 120 MLEKRRAALAAEGLFDAARKHPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L    ARL+     
Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQVARLSRCAAE 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+ +   L  L +ALP  +  ++    R D     L   L   +  +      +   ++
Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   + + +  + ++ + +E  + +             A L     +          
Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERATR 419

Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +  L  R++     ++      +    R+ Q+  Y+ TLKRGY  ++  +   +T
Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            K        + I F DG+ +                       +E+   QG L
Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518


>gi|304393145|ref|ZP_07375073.1| exodeoxyribonuclease VII, large subunit [Ahrensia sp. R2A130]
 gi|303294152|gb|EFL88524.1| exodeoxyribonuclease VII, large subunit [Ahrensia sp. R2A130]
          Length = 558

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 209/553 (37%), Positives = 303/553 (54%), Gaps = 28/553 (5%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           +     +  E SVSELS  LK  VE    HV VRGEISGYRG HSSGH+YF+LKD+ +RI
Sbjct: 6   NASKDTNALEVSVSELSGKLKRTVEDQFGHVRVRGEISGYRGPHSSGHSYFALKDDRARI 65

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           DAIIWKG   K+   PEEG+E +  GK+TT+PG S YQI+I+ + P+G+G L+  LE+RK
Sbjct: 66  DAIIWKGQNAKLAHKPEEGLEVIASGKLTTYPGRSSYQIVIDHIEPAGAGALMALLEQRK 125

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           K L  EGLF+D+ K  IPF+P++I V+TSPTGAVIRDIL R+  R+P+ VI++PV+VQG+
Sbjct: 126 KALASEGLFADERKQLIPFMPRVIGVVTSPTGAVIRDILHRLMDRYPVHVIVWPVRVQGE 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              +E+AN + QLN   +G   P+PD+II+ARGGGS+EDLW FNDE +VR++A S IP+I
Sbjct: 186 TSGREVANGVYQLNRFGDGTDWPKPDLIIVARGGGSLEDLWGFNDEALVRSVAASDIPVI 245

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETDWTL DYAADLR PTPT AAE AVP+K  L++ L NL ARL   + R+ + + 
Sbjct: 246 SAVGHETDWTLVDYAADLRMPTPTAAAEKAVPIKADLEAHLANLSARLRAAVSRVAETRR 305

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            +L +  + LP+ D  L+  R   D     L  NL   + R    +      ++   L  
Sbjct: 306 TSLRATSRGLPSLDNLLALPRRAFDEAAAGLGRNLVQRVERASFSYERAAGGLRPLLLEK 365

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL---------------------H 403
            +  + + +  + ++ ++ ++   R       ++   L                      
Sbjct: 366 RLAASGELLARQIENHQRALRNATRSKRQRFDDRAGRLSPDVLNRPISMAQRNLSQAANK 425

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +  E    R+        K   R++ + +  +           R+ +S +YK+ ++RGY 
Sbjct: 426 LRPEPLVQRVSAGRDASNKAFARVDRLTTASLAQAKERFERAERMRESLSYKSVIQRGYA 485

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL-------HN 516
            ++D     +    N+A    I +   DG   A V +          +            
Sbjct: 486 VLRDDAGALVDNASNVAVGDNIHVEMRDGSFGANVTDTNAAPPAKVAQSATVSKPKTPKK 545

Query: 517 NKREKQGTQGELF 529
             +     QG LF
Sbjct: 546 AAKPPATDQGNLF 558


>gi|85706860|ref|ZP_01037951.1| Exonuclease VII, large subunit [Roseovarius sp. 217]
 gi|85668653|gb|EAQ23523.1| Exonuclease VII, large subunit [Roseovarius sp. 217]
          Length = 497

 Score =  412 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 196/531 (36%), Positives = 284/531 (53%), Gaps = 36/531 (6%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE+SVS+LS  +K ++E   SHV VRGE+ G      SGH Y  LK
Sbjct: 1   MSDLIDDPDEGGNAPEFSVSDLSGAIKRMIEGEFSHVRVRGEL-GRISRPRSGHIYLDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + +  IIWKG   ++   PEEG+E +  G++TTFPG S+YQIIIE + P+G G L+ 
Sbjct: 60  DDSAVLAGIIWKGVATRLAVQPEEGMEVVATGRLTTFPGQSRYQIIIEDMKPAGMGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK  L  EGLF+ + K  +P++P II V+TSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 120 MLEKRKAALAAEGLFAPERKQALPYLPDIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQGD+C  E+A AI   N +  G   PRPD+II+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGDKCAPEVARAIRGFNAMTPGGALPRPDLIIVARGGGSVEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+  L + +    ARL++ + +
Sbjct: 240 SVIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRMDLLAWVEGQGARLSHALSQ 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            +  +   L  L +ALP +D  L   R RLD L   L   L   +  +  H +     ++
Sbjct: 300 GVSLRGQRLRDLARALPRADVLLDGPRQRLDALGERLPAALIRSVQVRRVHLSETAGALR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   ++ +R+ +      +                                I     
Sbjct: 360 PALLRRAVEGDRRRLQATAARL------------------------NVHALNRDITQKRR 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + ++  R   +   +++     +S   R+ ++  YK TLKRGY  ++  +   +T ++ 
Sbjct: 396 ELDRMSARFSEVAGRQVRGWQDRLSALERLRETLGYKATLKRGYAVVRG-DGAVVTTRKA 454

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            A    + I F DG  +  V    P    P          +     QG LF
Sbjct: 455 AAGAAVLEIEFADGMLD--VSGTGPAVPIP------KVKPKTPPEGQGSLF 497


>gi|163740774|ref|ZP_02148167.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161385765|gb|EDQ10141.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 521

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 189/541 (34%), Positives = 283/541 (52%), Gaps = 39/541 (7%)

Query: 2   NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           +P    +   + PE++VSE+S  +K  +E     + V+GE+ G      SGH Y+ +KD+
Sbjct: 7   DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S +    WKG +  +  +PEEG+E +V G++T F G SKY + ++ +  +G G L+  L
Sbjct: 66  RSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++PV 
Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E + RA+ANS 
Sbjct: 186 VQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVARAVANSQ 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L     N  ARL     + +
Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRSAGQAV 305

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   LN L +ALP  D  L   R RLDR+   L   L   + R+    +     ++  
Sbjct: 306 QQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAAALRPS 365

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   +   +  +      +                             +  +   H  I
Sbjct: 366 TLRQLVGARQDRLRNLSSRLT------------------------LRPIQQDLARQHDRI 401

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L  R+E + + ++      +  T R L+  +YK TL+RGY  ++  +   IT+    A
Sbjct: 402 GQLTQRLEAVQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VITRAAEAA 460

Query: 481 TKTRILINFFDGQANAIV------INKAPPKEQPTKKCQLHNNK------REKQGTQGEL 528
           T+ R+ I F D + +             PP +  +      +        + +   QG L
Sbjct: 461 TQPRLRIEFADAEIDVTPAEAGGGDGVTPPAKSSSAPKSEASKPGKRPSGKAQPDDQGSL 520

Query: 529 F 529
           F
Sbjct: 521 F 521


>gi|163733311|ref|ZP_02140754.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter
           litoralis Och 149]
 gi|161393099|gb|EDQ17425.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter
           litoralis Och 149]
          Length = 513

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 180/530 (33%), Positives = 284/530 (53%), Gaps = 18/530 (3%)

Query: 1   MNPFSQK-NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+         + PE++VSE+S  +K  +E     V VRGE+S       SGH Y+ +KD
Sbjct: 1   MDLLDDPTPGQNTPEFTVSEISGAVKRTLEGEFGRVRVRGEVS-RVIKARSGHMYYDIKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +++    WKG + ++  +PEEG+E +V G+IT +   SKY + ++ +  +G G L+  
Sbjct: 60  DRNQLSCTTWKGQVARLSVIPEEGLEVVVTGRITAYGAQSKYNMNVDEVAVAGKGALMAL 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRKK+L  EGLF    K P+P++P+II V+TSPTGAVIRDIL R+  RFP +V+I+PV
Sbjct: 120 LEKRKKQLEAEGLFEASRKRPLPYLPEIIGVVTSPTGAVIRDILHRLRDRFPRKVLIWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG++C  E+A AI   N L  G   PRPD+II+ARGGGS+EDLW FN+E + RA A S
Sbjct: 180 AVQGEKCAPEVAAAIAGFNALVPGGALPRPDLIIVARGGGSVEDLWGFNEESVARAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L + +   +AR+   + + 
Sbjct: 240 DIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPVRHELIAWVEQQDARMRQALSQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  + +ALP  D  L   R  +D     L   L   + R+      +   ++ 
Sbjct: 300 LTRRDQRLRDVARALPRPDSLLESPRQLVDTRGARLAPALMSGVQRRKIRLADVSGSLRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +Q   + + EK + ++  + + L     + + ++          +        H
Sbjct: 360 AMLTRAVQAEDRQLKEKARRLQPALLRALATRKEQLETRVRR--YRPAVLEQDYRRKKQH 417

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            + ++ R+  +    + +    +    R+ ++ +YK TL RG+  ++ ++   +T  +  
Sbjct: 418 FEDVVQRLGKVGEQNLDAARRKLDALGRLNETLSYKATLARGFAVVR-SDGAVVTDSKTA 476

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            T + + I F DG+    V  K   K+   K              QG LF
Sbjct: 477 KTASSLEIQFADGRV--TVGGKTASKKSAGK-----------PPEQGSLF 513


>gi|148253225|ref|YP_001237810.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. BTAi1]
 gi|146405398|gb|ABQ33904.1| Exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. BTAi1]
          Length = 536

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 204/538 (37%), Positives = 297/538 (55%), Gaps = 11/538 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M P       + PE++VSELS  LK  VE    HV VRGEI+G+RG HSSGH YF+LKD 
Sbjct: 1   MPPAEALP--NAPEFTVSELSSALKRTVEDQFGHVRVRGEITGFRGPHSSGHCYFALKDE 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I+A+IWKG   ++ F P+EG+E +  GK+TT+P SSKYQI+IE+L P+G G L+  +
Sbjct: 59  SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPNSSKYQIVIEALEPAGIGALMALM 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK+KL  EGLF    K  +P++P++I V+TSPTGAVIRDIL R+  RFP  V+++PVK
Sbjct: 119 EERKRKLGAEGLFDPARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRHVLVWPVK 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   +++A AI   N L E    PRPD++I+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 179 VQGEGSAEQVAAAIRGFNDLPEDGPIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESM 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +L  R++    R  
Sbjct: 239 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRSELMQEVASLARRVSVCWQRSQ 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + + N L +  +ALP + + L+  R RLD     L   L+      +R F     ++   
Sbjct: 299 EGRRNELRAAARALPGAAELLAIPRQRLDSAAASLPRALKTNTNVHFRQFAAASAKLTLR 358

Query: 361 FLIHNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYL 416
            L   I +    ++   + +    + +    R  F     +     +   Q K + I   
Sbjct: 359 VLHGQIAQADHRLIVSSERLSLSARALLHRRRERFEALDARFKASRLAYAQAKRQAIERE 418

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
               ++L  R    L+  I      V    ++L + +Y++ L RG+  ++D   + + Q 
Sbjct: 419 RDRTERLADRAARALATSISRLSARVDHAGQLLAALSYRSVLARGFALVRDDAGHPLHQA 478

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPT-----KKCQLHNNKREKQGTQGELF 529
            ++     + I F DG   A                  +       +      QG LF
Sbjct: 479 ASIGPNAALSIEFADGVVAATAAAGRAAPVAAPPKTARETKPAAAKRSPDPADQGSLF 536


>gi|126461268|ref|YP_001042382.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           ATCC 17029]
 gi|158513432|sp|A3PGZ4|EX7L_RHOS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|126102932|gb|ABN75610.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 519

 Score =  411 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 194/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%)

Query: 1   MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+        S + PE++VSELS  +K ++E     V VRGEI G     +SGH YF LK
Sbjct: 1   MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + + AI WKG   ++   PEEG+E +  G++TTFPG SKYQII+E + P+G+G L+ 
Sbjct: 60  DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+  L  EGLF    K P+PF+P++I V+TSP+GAVIRDIL R+  RFP  V+I+P
Sbjct: 120 MLEKRRAALAAEGLFDAGRKRPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+A AI   NTL EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGEKCAPEVAAAIRGFNTLPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L    ARL+     
Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+ +   L  L +ALP  +  ++    R D     L   L   +  +      +   ++
Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   + + +  + ++ + +E  + +             A L     +          
Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERASR 419

Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +  L  R++     ++      +    R+ Q+  Y+ TLKRGY  ++  +   +T
Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            K        + I F DG+ +                       +E+   QG L
Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518


>gi|260427057|ref|ZP_05781036.1| exodeoxyribonuclease VII, large subunit [Citreicella sp. SE45]
 gi|260421549|gb|EEX14800.1| exodeoxyribonuclease VII, large subunit [Citreicella sp. SE45]
          Length = 490

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 191/528 (36%), Positives = 271/528 (51%), Gaps = 39/528 (7%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S + PE+SVSELS  +K ++E    HV V+GE+ G      SGH Y  LKD+
Sbjct: 1   MDLL-DDDSGNTPEFSVSELSGAVKRVIEGEFGHVRVKGEV-GRVSRPRSGHIYLDLKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S I  I+WKG   ++E  PEEG+E +  G++TTFPG SKYQI+IE + P+G G L+  L
Sbjct: 59  RSVIAGIVWKGVAARLETQPEEGMEVVATGRLTTFPGQSKYQIVIEDIRPAGLGALMAML 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRK  L  EGLF    K P+P++P++I V+TSP+GAVIRDIL R+  RFP +V+I+PV 
Sbjct: 119 EKRKALLQAEGLFDASRKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+  AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E + RA A S 
Sbjct: 179 VQGQNCAPEVVRAIEGFNALSPGGALPRPDLLIVARGGGSVEDLWGFNEEAVARAAAASQ 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L S       R+   + + I
Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEIAVPVRMELLSWTGEAGVRMTRAMGQRI 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L  L +ALP ++  L   R RLD L   L   L     ++    + +   ++  
Sbjct: 299 EVRSQRLRDLSRALPRAETLLDQPRQRLDLLGDRLPRALIRGTEQRRVALSDVAGALRPS 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   I   R+ +  +   +                             +  I      +
Sbjct: 359 LLTRVIAHGRESLGRRTDRLS------------------------LRPIEREIAQGRDRL 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R+E   + ++      +   +R+L++ +YK TL RGY  ++      +T K    
Sbjct: 395 ATLSRRLEESATRRLDDPARKLDGLSRLLETLSYKGTLARGYAVVRSAEGTILTHKAAAQ 454

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
               + I F DG+                        K      QG L
Sbjct: 455 NAAGLEIEFSDGRF-------------ALGGKARPKRKDTPAPEQGSL 489


>gi|299134218|ref|ZP_07027411.1| exodeoxyribonuclease VII, large subunit [Afipia sp. 1NLS2]
 gi|298590965|gb|EFI51167.1| exodeoxyribonuclease VII, large subunit [Afipia sp. 1NLS2]
          Length = 480

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 202/525 (38%), Positives = 288/525 (54%), Gaps = 48/525 (9%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           + +   +  E++VSELS  LK  VE    HV VRGEISG+RG H+SGH YF+LKD  ++I
Sbjct: 4   AAETLSNATEFTVSELSSALKRTVEDTYGHVRVRGEISGFRGPHASGHCYFALKDESAKI 63

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +A+IWKG   ++   P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  +E+RK
Sbjct: 64  EAVIWKGVHGRMRVKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALMEERK 123

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           KKL  EGLF +  K  +P++P++I VITSPTGAVIRDIL R+  RFP RV+++PV+VQG+
Sbjct: 124 KKLAAEGLFDESRKQLLPWLPEVIGVITSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 183

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              +++A AI   N L+EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+I
Sbjct: 184 GSAEQVAAAIEGFNALEEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAASMIPLI 243

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +L  R      R  +++ 
Sbjct: 244 SAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRADLAIEISSLARRSFACWQRGQEHRR 303

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           + L S  + LP     L+  R R DR   +L   L        R  + I  R+    L  
Sbjct: 304 SELRSAARGLPKLTDLLAIPRQRFDRASAQLPRALRANTHVYDRRLSMIAGRLTVTTLRG 363

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + R  +    +   +                          ++  I    T I+   
Sbjct: 364 QIARARDQVNRLSESARRC-------------------------SQQFIALRRTRIQ--- 395

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                               + ++L + +YK  L RG+  ++D     +     +     
Sbjct: 396 -------------------HSAQMLAALSYKGVLSRGFALVRDETGLPLHHAAQVGAGEH 436

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           I I F DG+  A      PP  +   K     +  E +  QG+LF
Sbjct: 437 ISIEFADGRIAATAHG-TPPSAKKVAKPAKTADVPEHKKVQGDLF 480


>gi|220926374|ref|YP_002501676.1| exodeoxyribonuclease VII large subunit [Methylobacterium nodulans
           ORS 2060]
 gi|219950981|gb|ACL61373.1| exodeoxyribonuclease VII, large subunit [Methylobacterium nodulans
           ORS 2060]
          Length = 531

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 205/532 (38%), Positives = 289/532 (54%), Gaps = 36/532 (6%)

Query: 2   NPFSQK----NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57
           +P           + PE+SV+EL+  LK  +E    HV +RGEISGYRG HSSGHAYFSL
Sbjct: 31  SPLPASLAVAAPANAPEWSVTELAAALKRTLEDAFGHVRLRGEISGYRGPHSSGHAYFSL 90

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
           KD  ++IDA+IWKGTL ++   P+EG+E +  G+ITTFPG S YQIIIE+L P+G+G  +
Sbjct: 91  KDGGAKIDAVIWKGTLARLRHRPKEGLEVVATGRITTFPGKSAYQIIIEALEPAGAGAWM 150

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF 177
             LE+R++ L  EGLF    K P+P++P+++ V+TSPTGAVIRDIL R+  RFP  V+++
Sbjct: 151 ALLEERRRLLAAEGLFDAARKRPLPYLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVW 210

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV+VQG+   +E+A AI   + L      PRPD++I+ARGGGSIEDLW FN+E++VRA A
Sbjct: 211 PVRVQGEGSAEEVAAAIRGFSALAPDGPIPRPDVLIVARGGGSIEDLWSFNEEIVVRAAA 270

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S+IP+ISA+GHETD TL D+AAD RAPTPTGAAEMAVPV+  L + L  L  R    + 
Sbjct: 271 ESAIPLISAVGHETDVTLIDHAADRRAPTPTGAAEMAVPVRLDLLADLDGLARRHAAALA 330

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R I+ + + L  L + +P+ +  L+  R RLD     L   L        R    ++  +
Sbjct: 331 RSIERRRSDLRGLARVIPSPEALLAVKRQRLDLAEARLRPALAEGARTAQRRLARLLQAL 390

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   + + R+                            AI H  R   +  +    
Sbjct: 391 ARHPPALRLARARERF-------------------------AAIDHRPRHALERLVAVRS 425

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
             +  L  R+       ++   +  +    +  S  Y+  L RGY  + D     + +  
Sbjct: 426 ERLNGLAQRLAQAQDRDLERRRSRFAGAAALFDSLNYRAVLARGYALVLDAEGRPLAEAE 485

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 RI + F DG+  A+V   APP+    K+             QG LF
Sbjct: 486 AARAAGRITVEFQDGKVAAVV-EGAPPRRAAAKRGP------AGPARQGSLF 530


>gi|329851150|ref|ZP_08265907.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis biprosthecum
           C19]
 gi|328839996|gb|EGF89568.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis biprosthecum
           C19]
          Length = 520

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 192/529 (36%), Positives = 282/529 (53%), Gaps = 14/529 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           ++        + P YSVSEL+  LK  +E    HV +RGEIS     H+SGH Y +LKD+
Sbjct: 6   LSAADSPAGSNAPAYSVSELAGALKRTLEQTYDHVRLRGEISKVT-RHASGHIYLTLKDD 64

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + ID +IWKG  ++++  P+ G+E +V G+ITTFP SSKYQI+IE +  +G G LL  L
Sbjct: 65  KANIDGVIWKGQASRLQTQPDYGLEVIVTGRITTFPASSKYQIVIEQMEVAGVGALLAQL 124

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+ K+KL  EGLF  + K P+P+ P+ I VITSPTGAVIRDIL RI  R+P RVI++PV 
Sbjct: 125 ERLKQKLNAEGLFRPERKKPLPYAPRTIGVITSPTGAVIRDILHRIRDRWPCRVIVWPVV 184

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD  P +I NA+       E    PRPD+II+ARGGGS+EDLW FNDE + RA+   S
Sbjct: 185 VQGDAAPPQIINALRGF----ESGAVPRPDVIIVARGGGSVEDLWPFNDEALARAVFACS 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPTGAAE+A PV   L++   +LE R    + R +
Sbjct: 241 IPVISAVGHETDTTLIDHVSDRRAPTPTGAAELATPVIGELRALAADLERRRQACMSRGL 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L  L +ALP     +  ++ RLD + + L  +L   +   +  F     R+   
Sbjct: 301 ETRREKLALLARALPRPTDLIDSAQQRLDFVAQRLTGSLSQNLNLHHNAFTKASARLSPL 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   ++ +RQ +    Q +   +K H+             L     + +  I   H  +
Sbjct: 361 LLTRQVEHSRQRLDHAGQRLGGALKSHVDRATSRFAPLEGRLDGALTR-RLAIAQQHARL 419

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R+   +   +      +    ++  S +    L  G+  ++    + +TQ   ++
Sbjct: 420 PDLERRMGDAMQRLLSRQSERLQRLDQLRVSLSPTRPLDLGFALVERE-GHVVTQAAAVS 478

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               + + F DG+   I    + P +   KK      +       G LF
Sbjct: 479 AGDVLTLTFKDGKTTVIAGEGSAPPKPQPKKPSPPPQQ-------GSLF 520


>gi|312115900|ref|YP_004013496.1| exodeoxyribonuclease VII large subunit [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311221029|gb|ADP72397.1| exodeoxyribonuclease VII, large subunit [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 529

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 196/531 (36%), Positives = 286/531 (53%), Gaps = 9/531 (1%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
              +   +  E++VSELS+ +K  VE     V +RGEISGYRG HSSGHAY  LKD+ +R
Sbjct: 1   MQAELLSNIAEFTVSELSFAIKRTVEDAYGLVRLRGEISGYRGQHSSGHAYLCLKDDKAR 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA+IW+GT + ++F PEEG+E +V G+ITTFPG S YQI+IE L P+G+G L+  LE+R
Sbjct: 61  IDAVIWRGTFSHLKFKPEEGLEVIVTGRITTFPGKSSYQIVIEQLEPAGAGALMALLEER 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           KKKL  EGLF +  K P+PF P+++ ++TSPTGAVIRD+L   + R P RVI++PV+VQG
Sbjct: 121 KKKLAAEGLFDESRKRPLPFWPEVVGIVTSPTGAVIRDMLHGFTERCPTRVIVWPVRVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           + C  E++ AI   N L      PRPD++I+ARGGGS+EDLW FN+E +VRA A S+IP+
Sbjct: 181 ETCGAEVSAAIRGFNALDGFGPLPRPDLLIVARGGGSLEDLWGFNEEAVVRAAAESAIPL 240

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETDWTL D  AD RAPTPT AAE AVP    L   L     R    + R ++  
Sbjct: 241 ISAVGHETDWTLIDLVADARAPTPTKAAEWAVPKHADLIIRLGECIERARRCVRRNLEQL 300

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                   + LP     L   R RLD     L   L     R    F     R+    + 
Sbjct: 301 RAEFRGAERGLPRPHTLLQVPRQRLDTAGARLGQALIYFTERSRGRFERSAVRLSPRLVA 360

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + R+ +        +  +  +         +   L+     T  +       +  L
Sbjct: 361 RPIVEARERLGRAATFNARAFRDVIVRKRERWTVRAERLNAGLLATPTQ--RGIERLLML 418

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R +  +++        ++   ++LQS ++K+ L+RG+  ++D +   I +  +++   
Sbjct: 419 AARADQAVTNLAHRHRQRLAALGQLLQSLSHKSVLERGFALVRDADGRVIRRAASVSAAA 478

Query: 484 RILINFFDGQAN------AIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            + I F DG             + +  + +   +       ++K G QG L
Sbjct: 479 ALDIEFADGHVQAHRAAADAEADTSASRRRSAAQVPRRATSKDKDG-QGTL 528


>gi|209966855|ref|YP_002299770.1| exodeoxyribonuclease VII, large subunit, putative [Rhodospirillum
           centenum SW]
 gi|259646298|sp|B6IXD4|EX7L_RHOCS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|209960321|gb|ACJ00958.1| exodeoxyribonuclease VII, large subunit, putative [Rhodospirillum
           centenum SW]
          Length = 523

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 186/527 (35%), Positives = 284/527 (53%), Gaps = 10/527 (1%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
               +   + PE SV +L+  LK  VE    +V VRGEIS  +  HSSGH Y  LKD  +
Sbjct: 7   DLPPRTGSNLPEMSVGDLARALKRTVEDAYGYVRVRGEISQPK-RHSSGHVYLRLKDETA 65

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            ++A+ WKG   ++   PEEG+E +  G++TT+PG S+YQ++IE++  +G G LL  LE+
Sbjct: 66  VLEAVCWKGVAARLSVRPEEGMEVVCTGRLTTYPGRSQYQLVIETMELAGEGALLKMLEE 125

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
           RK++L  EGLF+ + K P+PF+P++I V+TSPTGAVIRDIL R++ RFP  V+++PV VQ
Sbjct: 126 RKRRLAAEGLFAPERKKPLPFLPEVIGVVTSPTGAVIRDILHRLADRFPRHVLLWPVAVQ 185

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+    ++A AI   N +  G   PRPD+II+ARGGGS+EDL  FN+E +VRA A S+IP
Sbjct: 186 GEGAADQVARAIAGFNAIAPGGPVPRPDLIIVARGGGSLEDLMPFNEEAVVRAAAASAIP 245

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+  L + +++   RL+  + R I  
Sbjct: 246 LISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLAQVLDDGRRLHQCLSRAIDT 305

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           + + +  L + L +    L     RLD     LE +L   + R++     +  R++    
Sbjct: 306 RRSHVEGLGRGLGDPRALLEGCIQRLDDRAERLELSLRTGLERRHAAVQQLGIRLR--HP 363

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              I           + +     + +             L  L    + +I      +  
Sbjct: 364 REVIGLAAARADAAGRALRAGFDRAVTVEQGRFHRVADRLSPLP--LRRQIDAGRDRLDA 421

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
           L  R+    + ++      +    ++L+S++YK  L+RG+  + D     +T+  + A  
Sbjct: 422 LPPRLAQAHARRLDQAGQRLVALGQLLESYSYKGVLERGFVLVADAEGRPVTRAADTAPG 481

Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             + + F DG   A+V   AP      +              QG LF
Sbjct: 482 QPVALRFADGTVGAVVDGAAPGASPAARTRAGKAK-----ADQGSLF 523


>gi|86748982|ref|YP_485478.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           HaA2]
 gi|86572010|gb|ABD06567.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris
           HaA2]
          Length = 538

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 203/534 (38%), Positives = 304/534 (56%), Gaps = 8/534 (1%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + +   +  E++VSELS  LK  VE +  HV VRGEISG+RG HSSGH YF+LKD  ++
Sbjct: 5   LAPETLANVGEFTVSELSQALKRTVEDSYGHVRVRGEISGFRGAHSSGHCYFALKDESAK 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I+A+IWKG   ++ F P+EG+E +  GK+TT+PGSSKYQI+IE+L P+G G L+  +E+R
Sbjct: 65  IEAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEER 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF +  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PVKVQG
Sbjct: 125 KRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVKVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   +++A AI   N L EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+
Sbjct: 185 EGSAEQVAAAIHGFNALPEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAESMIPL 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +   R+     R    +
Sbjct: 245 ISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVQSYARRMMLCWSRGQDSR 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            N L +  +ALP + + L+  R RLD     L   L       +R +    + I  + L 
Sbjct: 305 RNELRAAARALPAAGELLAIPRQRLDGAASSLPRALRANTHAHHRRYAKAASGITLNVLR 364

Query: 364 HNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTH 419
             +  + Q +    + ++   +   +H R  F     ++    +  EQ +  RI      
Sbjct: 365 AQVSHSAQRLGSTGERLKHCTRATLRHRRDRFESLAIRLQASKLANEQAQRMRIARERER 424

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           + +L  R     +         +  + ++L + +Y+  L RG+  ++D + + +     +
Sbjct: 425 MLRLAERARRAWATLRDRQQARLVQSGKLLTALSYRGVLARGFALVRDADGHALHAAAAV 484

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE----QPTKKCQLHNNKREKQGTQGELF 529
           +   R+ + F DG+           +       T   +    +  K   QG LF
Sbjct: 485 SAGARLSVEFADGRVGVTADGGGATRPDIAKPATPAAKPAPKRVSKPIDQGSLF 538


>gi|254485812|ref|ZP_05099017.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. GAI101]
 gi|214042681|gb|EEB83319.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. GAI101]
          Length = 491

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 194/530 (36%), Positives = 280/530 (52%), Gaps = 40/530 (7%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+   +     + PE++V+ELS  +K ++ES   HV +RGE+ G      SGH Y  LKD
Sbjct: 1   MDLIDEPAPGQNSPEFTVTELSSAIKRVIESEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S I  +IWKG   ++E  PEEG+E +  G+ITTF G SKYQI+IE + P+G G L+  
Sbjct: 60  DASVISGVIWKGVAARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRK  L  EGLF+ + K  +P++P +I V+TSP+GAVIRDIL R+  RFP +V+I+PV
Sbjct: 120 LEKRKAALAAEGLFAPERKRALPYLPDVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++ RA A S
Sbjct: 180 AVQGAKCAPEVARAIEGFNKLTFGGAIPRPDLLIVARGGGSVEDLWGFNEEIVARAAALS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L + L   EAR+   + + 
Sbjct: 240 EIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTRALSQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  + +ALP +D  L   R R+D L   L   L   + ++     +I   ++ 
Sbjct: 300 LARRDQRLRDMARALPRADSLLDGPRQRVDVLGGRLGPALTAGVQKRKVRLANISGVLRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +Q  ++ +                                 E            
Sbjct: 360 GTLTRALQSEQRRLAGLSARF------------------------RPEALVQDQKRKAEA 395

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            + L  R+      +       ++   R+ +  +YK+TL RGY  ++  +   +T K+  
Sbjct: 396 FQSLARRLSDAGLRQTAGWRKQIAGLDRVHEMLSYKSTLARGYAVVRG-DGKLVTTKKAA 454

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              T + I F DG+    V  KA P++   K              QG LF
Sbjct: 455 QDATSLEIEFADGRM--QVGGKAGPRKAAKK-----------PPEQGSLF 491


>gi|159045267|ref|YP_001534061.1| exodeoxyribonuclease 7 large subunit [Dinoroseobacter shibae DFL
           12]
 gi|157913027|gb|ABV94460.1| exodeoxyribonuclease 7 large subunit [Dinoroseobacter shibae DFL
           12]
          Length = 523

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 190/533 (35%), Positives = 282/533 (52%), Gaps = 14/533 (2%)

Query: 1   MNPFS----QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M+ F      +   + PE++VSELS  +K  +E     V VRGEI G      SGH YF 
Sbjct: 1   MSDFDLIDDPQPGQNAPEFTVSELSGAIKRTLEGEFGRVRVRGEI-GRVMRAKSGHLYFD 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD  + I+   WKG ++ +  +PEEG+E +  GK++ +  +S+Y I ++ +  +G G L
Sbjct: 60  LKDARAVINCTTWKGQVSGLGVMPEEGLEVVAEGKLSAYAPASRYNINVDRISVAGIGAL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176
           +  LEKRK  L  EGLF    K P+PF+P++I V+TSP+GAVIRDIL R+  R P +V+I
Sbjct: 120 MAMLEKRKAALTAEGLFEASRKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRCPRKVLI 179

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           +PV VQG  C  E+ANAI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++VRA 
Sbjct: 180 WPVAVQGQNCAPEVANAIRGFNALGPGGPLPRPDLLIVARGGGSLEDLWGFNEEIVVRAA 239

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A S IP+ISA+GHETD TL DYAAD RAPTPT AAE AVPV+  L ++L +L +R+   +
Sbjct: 240 AESDIPLISAVGHETDTTLIDYAADWRAPTPTAAAERAVPVRLDLLAALDSLGSRMLTGL 299

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
              ++ +   +  L +ALP S+  LS  R RLD     L   L      K          
Sbjct: 300 TGGVRARAQRVRDLSRALPRSEDLLSTPRQRLDHATARLPAALRSATQTKRGALTQAAAV 359

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           ++   L   I+  R+ +      +   + + +       + ++A L    E         
Sbjct: 360 LRPRLLAGRIEAERKDLRAASARLGAALPRAVAAQAERLRTRVARL--RGEILTQGRARD 417

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              ++ L  R+    + ++++   ++    R+  +  Y+ TLKRGY  ++D + + +T  
Sbjct: 418 QQRLEALSARLSRAGTAQVRTWRRTLDGLDRVRATVGYEATLKRGYAVVRDQD-SIVTTA 476

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              AT   + + F DG+   I      P              +     QG LF
Sbjct: 477 AAAATHPSLEVQFADGRVTVI------PNASAEGARPRKGRSKSAPDDQGSLF 523


>gi|110679217|ref|YP_682224.1| exodeoxyribonuclease VII large subunit [Roseobacter denitrificans
           OCh 114]
 gi|109455333|gb|ABG31538.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter
           denitrificans OCh 114]
          Length = 513

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 179/530 (33%), Positives = 280/530 (52%), Gaps = 18/530 (3%)

Query: 1   MNPFSQK-NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+         + PE++VSE+S  +K  +E     V VRGE+S       SGH Y+ +KD
Sbjct: 1   MDLLDDPTPGQNTPEFTVSEISGAVKRTLEGEFGRVRVRGEVS-RVIRARSGHMYYDIKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +++    WKG + ++  +PEEG+E +V G+IT +   SKY + ++ +  +G G L+  
Sbjct: 60  DRNQLACTTWKGQVARLSVIPEEGLEVVVTGRITAYGAQSKYNMNVDEVAVAGKGALMAL 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRKK+L  EGLF    K P+P++P+II V+TSPTGAVIRDIL R+  RFP +V+I+PV
Sbjct: 120 LEKRKKQLQAEGLFEASRKRPLPYLPEIIGVVTSPTGAVIRDILHRLRDRFPRKVLIWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+ C  E+A AI   N L  G   PRPD+II+ARGGGS+EDLW FN+E + RA A S
Sbjct: 180 AVQGERCAPEVAAAIAGFNALAPGGALPRPDLIIVARGGGSVEDLWGFNEESVARAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L + +   +AR+   + + 
Sbjct: 240 DIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELIAWVEQQDARMRQALSQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  + +ALP  D  L   R  +D     L   L   + R+      +   ++ 
Sbjct: 300 LTRRDQRLRDMARALPRPDSLLESPRQLVDTRGARLAPALMSGVQRRKIRLADVSGSLRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +Q   + + EK + ++  + + L     + + ++          +        H
Sbjct: 360 AMLTRAVQAEDRQLKEKVRRLQPALLRALATRKEQLETRVRR--YRPAVLEQEYRRKKQH 417

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
              ++ R+  +    + +    +    R+ ++ +YK TL RG+  ++  +   +T  +  
Sbjct: 418 FDDVVHRLGKVGEQNLDAARRKLDALGRLNETLSYKATLARGFAVVR-ADGAVVTDSKTA 476

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            T + + I F DG+     +   P   +   K             QG LF
Sbjct: 477 KTASSLEIQFADGRVT---LGGKPASRKSAGK----------PPEQGSLF 513


>gi|83955626|ref|ZP_00964206.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp.
           NAS-14.1]
 gi|83839920|gb|EAP79096.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp.
           NAS-14.1]
          Length = 515

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 195/530 (36%), Positives = 283/530 (53%), Gaps = 40/530 (7%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+     +   + PE++V+ELS  +K ++E    HV +RGE+ G      SGH Y  LKD
Sbjct: 25  MDLIDDPREGQNSPEFTVTELSGAIKRVIEGEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 83

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S I  +IWKG   ++E  PEEG+E +  G+ITTF G SKYQI+IE + P+G G L+  
Sbjct: 84  DSSVISGVIWKGVSARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 143

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRK  L  EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+  RFP +V+I+PV
Sbjct: 144 LEKRKAVLAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 203

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++ RA A S
Sbjct: 204 AVQGAKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEIVARAAAAS 263

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L + L   EAR+   + + 
Sbjct: 264 EIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTQALSQG 323

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  + +ALP  D  L   R RLD     L   L   + ++  H + I   ++ 
Sbjct: 324 LARRDQRLRDMARALPRPDSLLDGPRQRLDMRGARLGPALTAGVQKRKVHLSDISGALRP 383

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  ++Q  ++ +               R                              
Sbjct: 384 ATLRRSLQAEQRRLAALADRFRPDALVQDR------------------------KRKEEA 419

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            + L  R+      + +  H  ++   R+ +  +YK+TL RGY  ++  +   +T K+  
Sbjct: 420 FQSLARRLSDAGQRQTQGWHKQIAGLDRLHEMLSYKSTLARGYAVVRG-DGGVVTTKQAA 478

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + + I F DG+    +   A PK+ P K              QG LF
Sbjct: 479 LDASALEIEFIDGKMK--ISGGAAPKKTPKKAP-----------EQGSLF 515


>gi|209886360|ref|YP_002290216.1| exodeoxyribonuclease VII, large subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874556|gb|ACI94352.1| exodeoxyribonuclease VII, large subunit [Oligotropha
           carboxidovorans OM5]
          Length = 486

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 199/529 (37%), Positives = 290/529 (54%), Gaps = 52/529 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            ++  +  E++VSELS  LK  VE    HV VRGEISG+RG H+SGH YF+LKD  ++I+
Sbjct: 5   SESLSNTAEFTVSELSSALKRTVEDAYGHVRVRGEISGFRGPHASGHCYFALKDESAKIE 64

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           A+IWKG   ++   P+EG+E +  GK+TT+PGSSKYQI+IE++ P+G G L+  +E+RK+
Sbjct: 65  AVIWKGVHGRMRVKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMALMEERKR 124

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           KL  EGLF D  K  +P++P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+VQG+ 
Sbjct: 125 KLAAEGLFDDARKQLLPWLPEVIGVVTSPTGAVIRDILHRLHDRFPRRVLVWPVRVQGEG 184

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             ++IA AI   N L+EG   PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+IS
Sbjct: 185 SAEQIAAAIEGFNALEEGGAIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAGSMIPLIS 244

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+AAD RAPTPT AAEMAVPV+  L   + +L  R      R  +++ +
Sbjct: 245 AVGHETDITLIDFAADKRAPTPTAAAEMAVPVRADLAIEISSLARRAFACWQRGHEHRRS 304

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L    + LP     L+  R R DR   +L   L        R  + +  R+    L   
Sbjct: 305 ELRGAARGLPRLTDLLAIPRQRFDRAAAQLPRALRANTHVYDRRLSMVTGRLTVTTLRTQ 364

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I ++R  +      + +I K+   +    ++ +                           
Sbjct: 365 IARSRDQV----NRLSEIAKRCSDHFIALRRNR--------------------------- 393

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           V  + ++L + +YK+ L RG+  ++D     +     +    RI
Sbjct: 394 ----------------VQHSAQMLAALSYKSVLSRGFALVRDEAGQPLHHAAQVGAGERI 437

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT-----QGELF 529
            I F DG+  A     A P  +     +      +         QG+LF
Sbjct: 438 SIEFADGRIAATTHGPAVPAAKNVSPARKPAKAEKAAKPEPKKVQGDLF 486


>gi|163746079|ref|ZP_02153438.1| exodeoxyribonuclease VII, large subunit, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380824|gb|EDQ05234.1| exodeoxyribonuclease VII, large subunit, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 524

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 191/526 (36%), Positives = 287/526 (54%), Gaps = 24/526 (4%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F       + PE++V+ELS  +K ++E   +HV +RGE+ G      SGH Y  LKD
Sbjct: 1   MDLFDDPAPGANSPEFTVTELSGAIKRVIEGEFAHVRIRGEV-GRVSRPRSGHVYLDLKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S I  +IWKG   ++E  PEEG+E +  G+ITTF G SKYQI+IE + P+G G L+  
Sbjct: 60  DRSVISGVIWKGVTARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEKRK  L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+I+PV
Sbjct: 120 LEKRKAALAAEGLFAPERKRPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  E+  AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E +VRA A S
Sbjct: 180 AVQGAKCAPEVVRAIEGFNRLTPGGALPRPDLLIVARGGGSVEDLWGFNEESVVRAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L + L    AR+   + + 
Sbjct: 240 DIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPVRHELAAWLEGQGARMRQALSQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   +  + +ALP +D  L   R RLDR   +L   L   +  +     H+   ++ 
Sbjct: 300 LTRRGQRMRDVARALPRADTLLEGPRQRLDRGGEKLAPALIAGVQGRRVKLAHMSGALRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH---------MLREQTK 410
             L  ++  +RQ +      ++   +++L+      K ++   H           RE+  
Sbjct: 360 GTLRRHLDADRQRLANLSARLDPAWQRNLKGRNDFLKTRLDRFHPEVLQRQILRRRERLA 419

Query: 411 NR------------IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +R            +      + +++ R+              +    R L +  Y+ TL
Sbjct: 420 DRTQNFRPEVLSRDLARQDQRLTEVLARLARAGQAAQDRRRRQIDALGRTLGTLGYRETL 479

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
            RG+  ++  + N +T      + TR+ I F D +   +    AP 
Sbjct: 480 ARGFAVVRG-DGNVVTSAEAAKSATRLEIEFADDRLEVLHKEDAPS 524


>gi|295690267|ref|YP_003593960.1| exodeoxyribonuclease VII large subunit [Caulobacter segnis ATCC
           21756]
 gi|295432170|gb|ADG11342.1| exodeoxyribonuclease VII, large subunit [Caulobacter segnis ATCC
           21756]
          Length = 510

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 179/535 (33%), Positives = 278/535 (51%), Gaps = 31/535 (5%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   +  N  + P YSVSEL++ LK  +E     V +RGE+S     HS+GH Y ++KD+
Sbjct: 1   MTDLAP-NDSNAPPYSVSELAFALKRTLEDRYGFVRLRGELSKVTH-HSNGHVYLTIKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + ID ++WKG +  +   PE G+E +V GKITT+P  S+YQI+I+S+  +G G LL  L
Sbjct: 59  KAAIDGVVWKGNVRGLGVRPEHGLEVIVTGKITTYPAGSRYQIVIDSMEAAGVGALLAQL 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+ K KL  EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI  R+P +V+++PV 
Sbjct: 119 ERLKAKLAAEGLFAPERKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPVV 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    +++ A+   N ++ G   PRPDI+I+ARGGGS+EDLW FNDE + R +A S+
Sbjct: 179 VQGDAAAAQVSAAVRGFNAIQPGGPVPRPDILIVARGGGSVEDLWAFNDEALARTVAESA 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAEMA PV   L++ + + + RL+    R I
Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLGELRALISDFDRRLSRCGARTI 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L S  + LP  +  L+ ++ R D     L+  L        +    +  R+  D
Sbjct: 299 EERRTRLTSAARGLPRPNDLLALAQQRFDMASGRLDAALHRNTAVHAQDLLKVTARLTPD 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L          + +  + +     + +  +    +                       +
Sbjct: 359 ALRRQHAAKADRVADLGRRLNACGTRSVERVRDHAR-----------------------L 395

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L TR+      ++      ++   ++  S   +  L+ G+  ++  +   I     LA
Sbjct: 396 PLLWTRLGSAAERRLTRAEDQLTNLDKLRLSLNPRRPLELGFALVRKADGTIIRSAGALA 455

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG------TQGELF 529
               + + F DG+  A++ N+APP                +         QG+LF
Sbjct: 456 LGDHVALQFADGEREAVIGNEAPPSASTPSASTPPRPSPPRPKPAPSSTEQGDLF 510


>gi|254474563|ref|ZP_05087949.1| exodeoxyribonuclease VII, large subunit [Ruegeria sp. R11]
 gi|214028806|gb|EEB69641.1| exodeoxyribonuclease VII, large subunit [Ruegeria sp. R11]
          Length = 521

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 185/541 (34%), Positives = 278/541 (51%), Gaps = 39/541 (7%)

Query: 2   NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           +P    +   + PE++VSE+S  +K  +E     + V+GE+ G      SGH Y+ +KD+
Sbjct: 7   DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S +    WKG ++ +  +PEEG+E +V G++T F G SKY + ++ +  +G G L+  L
Sbjct: 66  RSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++PV 
Sbjct: 126 EKRKKQLESEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A S 
Sbjct: 186 VQGANCAAEVARAIDGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAGSQ 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L   +    ARL     + +
Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWVEQQGARLTRGAGQAV 305

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   LN L +ALP  D  L   R RLD++   L   L   + R+    +     ++  
Sbjct: 306 QIRRQRLNDLSRALPKPDTLLETPRQRLDQVSYRLPDALIRGVDRRRLKLSEAAASLRPA 365

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   +Q  R  +      +                             +  +      +
Sbjct: 366 TLRQLVQGRRDGLKNLSSRLS------------------------LRPIEREVARQGDRL 401

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L  R+  + S +++     +  T R L+  +YK TL RGY  ++  ++  +T+     
Sbjct: 402 TQLAQRMNALQSQRLQQARRGLDATGRQLEILSYKATLDRGYAVVRHGSD-VVTRAAGAR 460

Query: 481 TKTRILINFFDGQANA----------IVINKAPPKEQPTKKCQLHNN--KREKQGTQGEL 528
               + I F DG+              V         P+K           +  G QG L
Sbjct: 461 GADHLRIEFADGEIAVHPDGSDAGAKTVQQSTAQTSAPSKPAARKPKADPGQDDGGQGTL 520

Query: 529 F 529
           F
Sbjct: 521 F 521


>gi|257464609|ref|ZP_05628980.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor 202]
 gi|257450269|gb|EEV24312.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor 202]
          Length = 486

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 12/492 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   +V++L+Y ++H++E+ L  + + GEIS +     SGH Y +LKD ++++   ++K 
Sbjct: 2   NNILTVTQLNYSVRHLLETELGQIWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMFKM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             +++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E+ K KL  +G
Sbjct: 61  KNSRVTFYPQNGMQVLVRASVSLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKMKLAAQG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ +HK  +P   K + +ITS +GA ++DIL  +  R P L V+I+P  VQG E  ++I
Sbjct: 121 LFAQEHKKALPDFVKRVGIITSSSGAALQDILNILKRRDPSLAVVIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VQTIDLANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAYAIYRSEIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +    +N    R+   K+     L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELIRQLQHHFNMVNLAFDRIWHEKLTHFQQL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + L   + R ++L   +E +++ ++  ++     +  R++       +  
Sbjct: 295 NLRLNAQHPSKYLHVFKIRFEQLAYRMEKSVKSLLSTRHNQLTQVFLRLQPHHPKRKLDV 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ + +++  + Q + Q+L     + +     +         +I     +I  L  ++ 
Sbjct: 355 QREQLAQREGRLHQQMSQYLSRKKQDWENLTKRIESSP--LPYQIGKRQQYIAHLAQQLN 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           + +  +    +         L   +    L RGY+  Q +  + +T  + +A   +++  
Sbjct: 413 YAMDKRYLKEYQRFQALCTRLDGLSPLKILGRGYSITQTSKGHILTNAKEVAVGDKLITQ 472

Query: 489 FFDGQANAIVIN 500
              GQ  + V+ 
Sbjct: 473 LETGQIISEVVE 484


>gi|119386735|ref|YP_917790.1| exodeoxyribonuclease VII, large subunit [Paracoccus denitrificans
           PD1222]
 gi|119377330|gb|ABL72094.1| Exodeoxyribonuclease VII large subunit [Paracoccus denitrificans
           PD1222]
          Length = 519

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 190/533 (35%), Positives = 280/533 (52%), Gaps = 18/533 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F    + +  E++VSE+S  +K ++E     V VRGEI G     SSGH YF LKD+
Sbjct: 1   MELFEDTPASNAHEFTVSEISGAVKRVLEGEFGRVRVRGEI-GRVSRPSSGHLYFDLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I A+ WKG   ++   PEEGIE +  G++TTFPG SKYQ+I+E + P+G+G L+  L
Sbjct: 60  RAVIAAVTWKGQAARLSTRPEEGIEVIATGRLTTFPGQSKYQLIVEEIEPAGAGALMMML 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EK +K L  EGLF +  K P+P++P++I V+TSP+GAVIRDIL R+  RFP  V+I+PV 
Sbjct: 120 EKCRKALAAEGLFDESRKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPTHVLIWPVA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+ C  ++  AI   N L      PRPD+II+ARGGGS+EDLW FN+E +VRA A+S 
Sbjct: 180 VQGEGCASQVTAAIRGFNALPSDGPLPRPDLIIVARGGGSLEDLWGFNEEAVVRAAADSL 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+  L + L  ++AR+        
Sbjct: 240 IPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELAARLTEIQARMMRAAQTRN 299

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L+ L +AL       + +R R D     LE  L   +  +    N +   +   
Sbjct: 300 QRQRQRLSDLGRALGRPQALTAPARQRFDLFAERLEPALRGFVRARRDRLNAL--PLSLS 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ----TKNRIFYL 416
            L   ++  R  +  + Q +   + +  +       +  + L   R +       +I   
Sbjct: 358 ALRAMLRNRRDALQAQAQRLPLCLARLGQRRSERLTDLGSRLERARARMLADAARQIVRD 417

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              + +L  R+       +     ++    R+ Q+  Y+ TL+RG+  +   +   +T  
Sbjct: 418 RGTLDRLAARLSAAGGRLLAPRRDALERLDRLRQTLGYRETLRRGFAVVHGPSG-LLTHA 476

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              A   R  I F DG+  A           P         K  +   Q  LF
Sbjct: 477 AEAAQTPRFEIEFLDGRMAAR----------PDAPPAKPARKPREPKGQKSLF 519


>gi|16126485|ref|NP_421049.1| exodeoxyribonuclease large subunit [Caulobacter crescentus CB15]
 gi|221235265|ref|YP_002517702.1| exodeoxyribonuclease VII large subunit [Caulobacter crescentus
           NA1000]
 gi|22095679|sp|Q9A649|EX7L_CAUCR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783694|sp|B8GYM1|EX7L_CAUCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|13423755|gb|AAK24217.1| exodeoxyribonuclease large subunit [Caulobacter crescentus CB15]
 gi|220964438|gb|ACL95794.1| exodeoxyribonuclease VII large subunit [Caulobacter crescentus
           NA1000]
          Length = 505

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 174/530 (32%), Positives = 277/530 (52%), Gaps = 26/530 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S + P YSVSEL++ LK  +E     V +RGE+S     HS+GH Y ++KD+
Sbjct: 1   MSDLPPTDS-NAPPYSVSELAFALKRTLEDRYGFVRLRGELSKVTH-HSNGHVYLTIKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S ID ++WKG +  +   PE G+E +V GKITT+P  S+YQI+I+S+  +G G LL  L
Sbjct: 59  KSAIDGVVWKGNVRGLGVRPEHGLEVIVTGKITTYPAGSRYQIVIDSMEAAGVGALLAQL 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+ K KL  EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI  R+P +V+++P  
Sbjct: 119 ERLKAKLAAEGLFAPERKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPCV 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    +++ AI   N ++ G   PRPD++I+ARGGGS+EDLW FNDE + R +A  +
Sbjct: 179 VQGDAAAGQVSAAIRGFNAIQPGGPVPRPDVLIVARGGGSVEDLWAFNDEGLARTVAEGT 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAEMA PV   L++ + +L+ RLN    R I
Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLAELRALISDLDRRLNRCGARTI 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L S  + LP  +  L+ ++ R D     L+  L+       +    +  R+  +
Sbjct: 299 EERRTRLVSAARGLPRPNDLLALAQQRFDIASGRLDAALDRNTTVHAQSLLKVTARLTPE 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L        + + +  + ++   ++    +    +                       +
Sbjct: 359 ALGRQRAVKAERLADLSRRLDLAARRAPDRVAQHAR-----------------------L 395

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R+      +++     +    ++ QS   +  L+ G+  ++  +        +L 
Sbjct: 396 PALWDRLNAAGQRRLQRDADRLENLEKLRQSLNPERPLELGFALVRKGDGTLARSAADLV 455

Query: 481 TKTRILINFFDGQANAIVI-NKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           +  R+ + F  G  +A++     P         +           QG+LF
Sbjct: 456 SGERVNLKFKSGDRDAVIDGEGGPAPAPTAPAPKPRPKPAAPPAGQGDLF 505


>gi|114328962|ref|YP_746119.1| exodeoxyribonuclease VII large subunit [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317136|gb|ABI63196.1| exodeoxyribonuclease VII large subunit [Granulibacter bethesdensis
           CGDNIH1]
          Length = 543

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 170/523 (32%), Positives = 271/523 (51%), Gaps = 11/523 (2%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           + PEYSVS+LS  +K  +E     V VRGE++  +    SGH Y SLKD   +I  ++WK
Sbjct: 25  NIPEYSVSDLSGTIKRTLEGAFGRVRVRGELTEVKRYP-SGHIYLSLKDEGGKIAGVVWK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + ++  LPE G+E +  GKI+++   S YQ+II+ +  +G+G LL  +E  +++L EE
Sbjct: 84  FAVPRLGMLPENGVEVVATGKISSYADRSSYQLIIDRMEYAGAGALLARIEMLRQRLAEE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF    K  +P +P+++ V++S  GAV++DI   I+ RFP  V+++PV VQG+    +I
Sbjct: 144 GLFDAARKRALPRLPRVVGVVSSEKGAVLQDIRTTIARRFPRTVLLWPVPVQGEGAAAKI 203

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI     L      PRPD++I+ARGGGS+EDL  FN+E+++RA A   IP+ISA+GHE
Sbjct: 204 AAAIDGFGRLPPDGPVPRPDVLIVARGGGSLEDLMAFNEEIVIRAAAACPIPVISAVGHE 263

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL DYA+D RAPTPT AAE+AVP++  L + L +  ARL   + R+ +     L   
Sbjct: 264 TDTTLIDYASDRRAPTPTAAAELAVPMRAELTADLAHKTARLGGALSRMTQGAWLGLAQA 323

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + LP+    L  +R RLD     L   L  ++  +     +    ++     H I + R
Sbjct: 324 ERLLPDLPTLLGHARQRLDDRSLRLGMALPGLLAARRAGLRNAA--LRLPRPAHIITQTR 381

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           QH+   +  +   +   L +     +     L       ++ +       + L  R+   
Sbjct: 382 QHLRGAENSLRVAMPMLLAHKRSALRLHALRLGA---SLRHSLHLHLGDARPLFVRMRAA 438

Query: 431 -LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L  +++     +      L+S +Y+  L RGY  + D + + +TQ   +A+   + + F
Sbjct: 439 PLPGRLREAQARLDGLCARLESVSYQAVLARGYALVLDHDGHAVTQAARIASGQILTLRF 498

Query: 490 FDGQANAIVI----NKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            DG+             PP    T   +    K+     QG+L
Sbjct: 499 SDGEKTVQATHNPAGSTPPAGNDTASVKRTARKKSGPQKQGDL 541


>gi|188583526|ref|YP_001926971.1| exodeoxyribonuclease VII, large subunit [Methylobacterium populi
           BJ001]
 gi|179347024|gb|ACB82436.1| exodeoxyribonuclease VII, large subunit [Methylobacterium populi
           BJ001]
          Length = 548

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 199/535 (37%), Positives = 276/535 (51%), Gaps = 61/535 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             + PE+SV +L+  LK  +E    HV +RGEISGYRG H SGHAYFSLKD  ++IDA++
Sbjct: 61  QANAPEWSVGDLAAALKRTLEDAFGHVRLRGEISGYRGPHGSGHAYFSLKDGSAKIDAVV 120

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           WKG L ++   P+EG+E +  GKITTF G S YQI+I+S+ P+G G  +  LE+RK+ L 
Sbjct: 121 WKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALLEERKRLLA 180

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLF  + K PIPF+P+++ V+TSPTGAVIRDIL R+  RFP  V+++PV+VQG+    
Sbjct: 181 AEGLFEAERKRPIPFLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVRVQGEGAAD 240

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L  G   PRPD++I+ARGGGSIEDLW FN+E +VRA A S IP+ISA+G
Sbjct: 241 EIAAAIRGFNALIPGGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESGIPLISAVG 300

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TL D+A+D RAPTPTGAAEMAVPV+  L + + +L AR    ++R I+ +     
Sbjct: 301 HETDTTLIDFASDRRAPTPTGAAEMAVPVRAELLAQIHDLGARQAGTMLRRIERERADFR 360

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +L++A+P +D  L+  R RLD     L   L           N + +R+        + +
Sbjct: 361 ALVRAIPGADAFLAAKRQRLDLADARLRPALAANARDSRERLNRLADRLTRRSPAIALAE 420

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  +                                                       
Sbjct: 421 ARARLAGIDHRPRTA--------------------------------------------- 435

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             ++  I+     +     +L + +YK  L RGY  ++D +   +      A   R+ + 
Sbjct: 436 --IARIIERRRDRLGAQAGLLGALSYKAVLARGYALVRDADGLPVRSSEAAAAAARLQLQ 493

Query: 489 FFDGQANAIVI----NKAPPKEQPTKKCQLHNNKRE----------KQGTQGELF 529
           F DG   A          PP     K+                       QG LF
Sbjct: 494 FADGAVFARPEEGPAEIPPPPASRPKRAPRRAAPEPARTAAEAVSEPAARQGSLF 548


>gi|260433213|ref|ZP_05787184.1| exodeoxyribonuclease VII, large subunit [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417041|gb|EEX10300.1| exodeoxyribonuclease VII, large subunit [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 516

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 36/531 (6%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PEY+VSE+S  +K  +E     + VRGE+ G      SGH Y+ +K
Sbjct: 20  MSDLLDDPIPGQNTPEYTVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 78

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + +    WKG +  +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+ 
Sbjct: 79  DDRNVLACTTWKGQIAGLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 138

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKK+L  EGLF+ + K P+PF+P+II V+TSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 139 LLEKRKKQLESEGLFAPERKKPLPFLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 198

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+ANAI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A 
Sbjct: 199 VAVQGANCASEVANAIRGFNRLAPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAA 258

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L +      ARL+     
Sbjct: 259 SEIPLISAVGHETDTTLIDYVSDRRAPTPTAAAELAVPVRMELLAWTGEQGARLSRAATD 318

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  L +ALP  +  L   R RLD +   L   L+  +  +      +   ++
Sbjct: 319 AVQRRAQRLRDLSRALPRPETLLDGPRQRLDLIADRLAPALQRGVQNRRLQVVELSGHLR 378

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L + +   R  +      +                             +  I     
Sbjct: 379 PSTLRNLVAARRDTLRNLSSRLS------------------------IRPIQRDIQQQRD 414

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + +L  R+    + ++      +  T R+ ++ +YK TL+RGY  +   +   +T K  
Sbjct: 415 RVNQLAQRMTAAQTLRVDRLRQQLDATDRLRETLSYKATLQRGYAVVHSESG-VVTTKAQ 473

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            +    + I F DG+   +                     +     QG LF
Sbjct: 474 ASKHAALTIEFADGELKTV--------PLSGTTPTAKKPSKPPAPDQGSLF 516


>gi|254460102|ref|ZP_05073518.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium
           HTCC2083]
 gi|206676691|gb|EDZ41178.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 520

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/531 (34%), Positives = 283/531 (53%), Gaps = 13/531 (2%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE++VSE+S  +K  +E    HV +RGE+ G      SGH YF +K
Sbjct: 1   MSDLIDDPREGANEPEFTVSEISSAVKRTIEGTFDHVRIRGEV-GRVVHARSGHLYFDIK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +    WKG + K+  +PEEG+E +  G++TTFPG SKYQ+ ++ +  +G G L+ 
Sbjct: 60  DDRSVLGCTAWKGQVAKLTVMPEEGMEIIATGRLTTFPGQSKYQMNVQDVAVAGEGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKKKL  EG+F  + K  IPF+P++I V+TSPTGAVIRDIL R+  RFP +V+I+P
Sbjct: 120 MLEKRKKKLKAEGIFDPERKQNIPFLPEVIGVVTSPTGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG+ C  E+  AI   N    G   PRPD+II+ARGGGSIEDLW FN+E++ RA A 
Sbjct: 180 VAVQGERCAPEVTRAIDGFNAFTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAG 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S+IP+ISA+GHETD TL D+A+D RAPTPT AAE AVPV+  L + L   E R  + +  
Sbjct: 240 SAIPLISAVGHETDTTLIDFASDHRAPTPTAAAERAVPVRAELLARLEETEGRRISAMRA 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            + ++   L  L +ALP  +  L+ S+ RLD     L + L   I       +     ++
Sbjct: 300 ALNHRGEKLRDLSRALPRREALLAHSQQRLDLASARLPNALMARINLGRTGLSQASGALR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L  +++ + + + ++   +   +++      ++ +           +   +I     
Sbjct: 360 PSLLSRSLEASSERVKDRAVRLAPALERKRTTAAIDLQNLSKRFDA--TRVDAQIELRRQ 417

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            +  ++ R +     +       +    R+  +  YK TL RGY  ++  + + +T ++ 
Sbjct: 418 KLSDVLHRFKQAAHAQQDQQTRKLDALDRLRLTLGYKATLDRGYAVVRSADGDVLTTQKA 477

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             +   + I F DG  N  +    P K   T   +           QG LF
Sbjct: 478 AKSHVALDIEFADGTLN--IGTGRPAKPAKTATVKT------DPKDQGSLF 520


>gi|254441004|ref|ZP_05054497.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus
           307]
 gi|198251082|gb|EDY75397.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus
           307]
          Length = 515

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 176/530 (33%), Positives = 269/530 (50%), Gaps = 18/530 (3%)

Query: 1   MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+   +  +  + PE++VSELS  +K  +E    HV VR E+ G      SGH YF LKD
Sbjct: 3   MDLIDEPEAAGNTPEFTVSELSGAVKRTIEGEFGHVRVRAEV-GRVTHARSGHLYFDLKD 61

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + + +    WKG +  +  +PEEG+E +V G++TTF   SKYQ+    +  +G G L+  
Sbjct: 62  DRNVLACTTWKGQVADLSVIPEEGMEVVVKGRMTTFGSQSKYQLNATEVAVAGVGALMAM 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           L+KRKK L  EGLF  + K  +PF+P +I VITSPTGAVIRDIL R+  RFP +VI++PV
Sbjct: 122 LDKRKKALEAEGLFGAERKQALPFLPDVIGVITSPTGAVIRDILHRLRDRFPRKVIVWPV 181

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  ++A AI   N +  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A S
Sbjct: 182 AVQGKDCAPQVARAIDGFNAMTSGGALPRPDLIIVARGGGSIEDLWGFNEEIVARATAAS 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETD TL D+ +D RAPTPT AAEMAVPV+  L  ++  + AR +  +   
Sbjct: 242 TIPLISAVGHETDTTLIDFVSDQRAPTPTAAAEMAVPVRLELMVAVDQMGARASRAVTDG 301

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   +  L + LP  +Q    ++ R D L  +L+  L   +             ++ 
Sbjct: 302 VTRRKQRVADLARVLPKPEQLTEDAKQRFDYLSEKLDAALIGRVTEGRLRMGEASGLLRP 361

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L++ + + R+ +      +   + +       +   +   L                 
Sbjct: 362 SVLVNRLAQGRERMSGLDARLGPALGRKAAQAQRDLDGQARRLRPDVLAVAQ--TRAAKD 419

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
              ++ R+      + +   + +    R+ ++  Y+ TLKRGY  ++  +   +T  +  
Sbjct: 420 FAVMLRRMTTASRTQTQKQRSRLEALDRMRETLGYRETLKRGYAVVRG-DGAVVTSAKAA 478

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              T + I F DG                          +     QG LF
Sbjct: 479 KAATTLDIEFADGTM-------------APAGKPAKLKVKTPPPDQGSLF 515


>gi|192973054|gb|ACF06953.1| exodeoxyribonuclease VII large subunit [uncultured Roseobacter sp.]
          Length = 517

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 176/531 (33%), Positives = 273/531 (51%), Gaps = 16/531 (3%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE++VSE+S  +K  +E+    + V+GE+ G      SGH YF +K
Sbjct: 1   MSDLIDDPRLGENAPEFTVSEISGAVKRTLEAEFGRIRVKGEV-GRVVQARSGHMYFDVK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  + +    WKG ++K+  LPEEG+E +V GK+T+F G SKY + ++ +  +G G L+ 
Sbjct: 60  DERNALACTTWKGQVSKLSVLPEEGMEVVVSGKMTSFGGQSKYNLNVDDVAVAGVGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK  L  EGLF    K  +PF+P +I V+TSPTGAVIRDIL R+  RFP +V+++P
Sbjct: 120 MLEKRKTALAAEGLFDPARKQALPFLPDVIGVVTSPTGAVIRDILHRLRDRFPRKVLVWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+A AI   N +  G   PRPD++I+ARGGGSIEDLW FN+E++ RA A 
Sbjct: 180 VAVQGANCAAEVARAIAGFNAMTPGGALPRPDLLIVARGGGSIEDLWGFNEEIVARAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+ +D+RAPTP+ AAE+AVPV+  L +      AR    +  
Sbjct: 240 SEIPLISAVGHETDTTLIDFVSDMRAPTPSAAAELAVPVRLDLLAETRAKGARAAQGLAN 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           ++  +   L  + +ALP  D     ++ RLD     L   L  ++ ++         +IK
Sbjct: 300 IMARRKQRLADVSRALPRPDSLTQTAQQRLDHWEGRLPLGLRSLVQKQQLRLTASAGQIK 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   + +  + +    Q +   + +    +   +  +     +       R+  L  
Sbjct: 360 PSALGRILVQEARQLQALGQRLPAGLDRA--ALSARQMLRACASRLRPAPLAERVARLRK 417

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            +  L TR+E     +++     +    R+ ++  Y+ TL+RGY  ++      IT    
Sbjct: 418 DLDDLETRLEQTFERQLQRRREQLVACDRLRETLGYRETLRRGYAVVRSGQ-ALITNVAK 476

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 + I F DG+               +   +     +     QG+LF
Sbjct: 477 AEAAKSLEIEFADGRFAV----------GQSTAARPAGRAKPTPPEQGQLF 517


>gi|83950855|ref|ZP_00959588.1| exodeoxyribonuclease VII, large subunit [Roseovarius nubinhibens
           ISM]
 gi|83838754|gb|EAP78050.1| exodeoxyribonuclease VII, large subunit [Roseovarius nubinhibens
           ISM]
          Length = 519

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/531 (34%), Positives = 273/531 (51%), Gaps = 14/531 (2%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PEY+VSE+S  +K  +E N   V VRGE+ G      SGH Y+ +K
Sbjct: 1   MSDLIDDPLPGQNMPEYTVSEISGEVKRTLEGNFGRVRVRGEV-GRVFKARSGHLYYDVK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + +    WKG +  +   PEEG+E +V G++T F   SKY + ++ +  +G G L+ 
Sbjct: 60  DDKNVLACTTWKGQVAGLSVEPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+K L  EGLF +  K PIP++P+II V+TSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 120 LLEKRRKALAAEGLFDEGRKRPIPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++VRA A 
Sbjct: 180 VAVQGQSSAAEVARAIAGFNALTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVVRAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+  L + L    ARL++ +  
Sbjct: 240 SEIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRLDLLAWLDGQSARLSHALSS 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  L +ALP  D  L   R RLD     L   L   +  +    +     ++
Sbjct: 300 GVERRGQRLRDLGRALPRVDSLLDGPRQRLDVWGERLPAALIRSVQMRRVRLSDAAGALR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   ++   Q + +  + +   +               A    +  +    +     
Sbjct: 360 PAALRGKLRDQGQRLTQTGERLGHALGARTERGRERYDAMSARFGRV--EPHEALQRRRE 417

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + +L  R   + + +IK     +    R+ ++ +YK TL+RGY  ++  + + I     
Sbjct: 418 DLTRLSDRFGQVGARQIKDWRDRLDALDRLRETLSYKATLERGYAVVRG-DGDLIKSAAA 476

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 + I F DG             +      +     +   G QG LF
Sbjct: 477 AGRAQNLEIEFADG--------VHKVGQPGAPAPKKPAKPQTPPGDQGSLF 519


>gi|99081786|ref|YP_613940.1| exodeoxyribonuclease VII large subunit [Ruegeria sp. TM1040]
 gi|122397774|sp|Q1GF88|EX7L_SILST RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|99038066|gb|ABF64678.1| Exodeoxyribonuclease VII large subunit [Ruegeria sp. TM1040]
          Length = 502

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 188/531 (35%), Positives = 272/531 (51%), Gaps = 31/531 (5%)

Query: 1   MNPFSQKNS--LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+      +   + PE+SVSE+S  +K  +E     + VRGE+ G      SGH Y+ +K
Sbjct: 1   MSDLLDDPTPGQNAPEFSVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +    WKG ++ +  +PEEG+E +V G++T F G SKY + ++ +  +G G L+ 
Sbjct: 60  DDRSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK +L  EGLF+ + K P+P++P II VITSP+GAVIRDIL R+  RFP +V+++P
Sbjct: 120 LLEKRKAQLAAEGLFAPERKKPLPYLPGIIGVITSPSGAVIRDILHRLRDRFPRKVLVWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A 
Sbjct: 180 VAVQGSNSAPEVARAIDGFNALTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARATAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+  L   + N  AR+ N   R
Sbjct: 240 SDIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEHAVPVRLELLGWVENQGARMANAASR 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  + +ALP  D  L   R RLDR+   L + L   + R+    +     ++
Sbjct: 300 AVQLRRQRLGDMARALPRPDTLLETPRQRLDRVSDRLPNALISGVQRRKLTLSDRAASLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   +   +  +      +                                +     
Sbjct: 360 PATLRGLVSSRQDKLKNLSSRLT------------------------LRPITQDLGRKRD 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + ++  R+    S +I      +S T R L   +YK TL+RGY  ++D     +T    
Sbjct: 396 ALDRITKRLNTAQSSRIDRQIDRLSATARQLDILSYKATLRRGYAVVRDGA-ALVTSTEG 454

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 + I F DG  +      AP   + +          +  G QG LF
Sbjct: 455 ARKAAELSIEFADGTFDV---ASAPSTTKKSAPKPAAPKAPKTPGEQGSLF 502


>gi|167645191|ref|YP_001682854.1| exodeoxyribonuclease VII large subunit [Caulobacter sp. K31]
 gi|189037852|sp|B0SY33|EX7L_CAUSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|167347621|gb|ABZ70356.1| exodeoxyribonuclease VII, large subunit [Caulobacter sp. K31]
          Length = 528

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/526 (34%), Positives = 278/526 (52%), Gaps = 7/526 (1%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
              + P YSVSEL++ LK  +E++ + V +RGE+S     H +GH Y ++KD+ S ID +
Sbjct: 6   PDSNAPAYSVSELAFALKRTLETSYAFVRLRGELSKVTH-HGNGHVYLTIKDDKSAIDGV 64

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +WKG +  +   PE G+E +V GKITT+P  S+YQI+IE++  +G G LL  LE+ K KL
Sbjct: 65  VWKGNVRGLGIRPEHGLEVIVTGKITTYPAGSRYQIVIETMEAAGVGALLAQLERLKAKL 124

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187
             EGLF+   K P+P +P ++ VITSPTGAVIRDIL RI  R+P +V+++P  VQGD   
Sbjct: 125 NAEGLFAPDRKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPCVVQGDAAA 184

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +++ AI   N L  G   PRPDI+I+ARGGGS+EDLW FNDE + R +A  +IP+ISA+
Sbjct: 185 GQVSAAIRGFNALTPGGPVPRPDILIVARGGGSVEDLWAFNDEGLARTVAEGTIPLISAV 244

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TL D+ +D RAPTPT AAEMA PV   L++ + + + RLNN   R ++ +   L
Sbjct: 245 GHETDTTLIDFVSDRRAPTPTAAAEMATPVLAELRALVSDYDRRLNNCGGRAVEERRTRL 304

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
            S  + LP     L+ ++ RLD L       L+ +     R F     R+    L  N  
Sbjct: 305 TSAARGLPRPADLLALAQQRLD-LAVRGLPRLDDLTAPAERRFKEAAARLD-TALQRNTD 362

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            + + +L+    +        R     +   +     L  +        H  +  L  R+
Sbjct: 363 IHARDLLKVTARLSPDTLHRQRADAGRRVGDLGRRLDLAARRVPERVAQHARLPALQDRL 422

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
             +   +++     ++   ++ QS      L+ G+  +   +         LA+  R+ +
Sbjct: 423 NAVARRRLERETDRLAGLEKLRQSLNPTRPLELGFALVHKADGGIARSASELASGERVRL 482

Query: 488 NFFDGQANAIVINKA----PPKEQPTKKCQLHNNKREKQGTQGELF 529
            F  G  +A++  ++    PP   P         K      QG LF
Sbjct: 483 QFRQGDRDAVIDGESSGVLPPSAAPAPTRPTPRPKPASSSDQGSLF 528


>gi|154251076|ref|YP_001411900.1| exodeoxyribonuclease VII large subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|171769562|sp|A7HQR0|EX7L_PARL1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|154155026|gb|ABS62243.1| exodeoxyribonuclease VII, large subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 477

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 205/530 (38%), Positives = 288/530 (54%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M P   ++    +  E+SVSE+S+ LK  VE    HV VRGEI+GYRG HSSGH YF LK
Sbjct: 1   MPPSDTQSPAANNAHEFSVSEISFALKKTVEETFGHVRVRGEITGYRGPHSSGHCYFGLK 60

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ +R+DA+IWKG   K+ F PEEG+E +  GK+TT+PGSSKYQI+I+ L P+G G L+ 
Sbjct: 61  DDKARMDAVIWKGNFGKLRFKPEEGMEVIATGKLTTYPGSSKYQIVIDHLEPAGVGALMA 120

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LE+R+KKL  EGLF+ + K  +PF+P++I V+TSPTGAVIRDIL R+  RFP  VI++P
Sbjct: 121 LLEERRKKLAAEGLFAAERKRALPFLPEVIGVVTSPTGAVIRDILHRLQDRFPRHVIVWP 180

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V+VQG+    E+A AI   N +++G   PRPD++I+ARGGGSIEDLW FN+E++VRA A 
Sbjct: 181 VRVQGETSAAEVAAAIRGFNAMEKGGKTPRPDLLIIARGGGSIEDLWSFNEEIVVRAAAE 240

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S+IP+ISAIGHETD TL D+A+D RAPTPT AAEMAVPV+  L + + +  +RL     R
Sbjct: 241 SAIPLISAIGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELLADVRDKGSRLIRCEAR 300

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+     L  L + LP     ++  R R D     L   L      K    + +  R+ 
Sbjct: 301 AIESYRTQLGGLARGLPKLQDLVALPRQRFDTAADRLGRALIRAAEVKRARLSRVEGRLS 360

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              +   I   R+ + +  Q + +                                    
Sbjct: 361 DRPIRLRIANERKGLPQLLQRLTRAET--------------------------------- 387

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                          ++     S+  +T++L+S++Y   LKRGY  ++D     I     
Sbjct: 388 --------------RRVADLARSLDGSTKLLESYSYHGVLKRGYAVVRDETGKPIRAGAG 433

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
                RI I F + + +A+V                    ++  G QG L
Sbjct: 434 QTAGARIEIEFAEDRLDAVV-------APGGTVAPRKAPPKKPGGGQGSL 476


>gi|83591499|ref|YP_425251.1| exodeoxyribonuclease VII large subunit [Rhodospirillum rubrum ATCC
           11170]
 gi|83574413|gb|ABC20964.1| Exodeoxyribonuclease VII large subunit [Rhodospirillum rubrum ATCC
           11170]
          Length = 537

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 203/538 (37%), Positives = 290/538 (53%), Gaps = 15/538 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M         + PE SVSELS  LK  +E   S V VRGEIS  +    SGH Y  LKD+
Sbjct: 1   MIDTPNAPVHNLPELSVSELSGALKRTIEEAFSRVRVRGEISQPKV-AGSGHCYLRLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + IDAIIW+GT+ K+   PEEG+E + IG++TT+PG S YQI+IESL  +G G LL  L
Sbjct: 60  QAVIDAIIWRGTMAKLALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKML 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+R+++L  EGLF    K   PF+P +I VITSPTGAVIRDIL R++ RFP  V+++PV 
Sbjct: 120 EERRRRLAAEGLFDAGRKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFPRPVLVWPVA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    +IA AI   N L  G   PRPD++I+ARGGGS+EDL  FNDE +VRA + S+
Sbjct: 180 VQGEGAAAQIAAAITGFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASA 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+AADLRAPTPTGAAEMAVPV+  L + +     RL+   +RLI
Sbjct: 240 IPLISAVGHETDTTLIDHAADLRAPTPTGAAEMAVPVRLDLLAQVRERGGRLDGATLRLI 299

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   +  L + LP+  + +     RLD     LE  L  ++ R+     H   R++  
Sbjct: 300 EERRLRIEGLGRGLPDLARLIGTFAQRLDDRAERLEAALPRLLDRRADGVFHTAARLRG- 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I +    +    + +E  + + LR       ++   L     Q    +      +
Sbjct: 359 -PGEMIARKADALERAGRGLETGLARGLREAASRLDQRADRL--RPGQIARLVAEGSRAL 415

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R++ +    +     ++      L + +Y+  L+RGY  ++D     +   R L 
Sbjct: 416 TTLAGRLDDLGRQTLVRRQDTLEGLGARLDNMSYRKVLERGYAVVRDATGAIVPAARGLT 475

Query: 481 TKTRILINFFDGQANAIVIN-------KAPPKEQPTKKCQLHNNKREKQGT---QGEL 528
               ++++F DG+  A +           P  E P         +R +      QG+L
Sbjct: 476 KGDGVVLDFRDGRVAATIGEADPEAIPGQPAPETPPTAAGRSPARRPRSAGEGRQGDL 533


>gi|304320146|ref|YP_003853789.1| Exonuclease VII, large subunit [Parvularcula bermudensis HTCC2503]
 gi|303299049|gb|ADM08648.1| Exonuclease VII, large subunit [Parvularcula bermudensis HTCC2503]
          Length = 550

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 177/526 (33%), Positives = 273/526 (51%), Gaps = 10/526 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           +   S +  EYSVSELS  +K  +E    +V VRGE+ G      +GH Y  LKD  + +
Sbjct: 7   ADGGSGNLKEYSVSELSGAVKRTIEDGFGYVRVRGEL-GRVSRSGNGHCYLDLKDERAVL 65

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            ++IWKG  ++++  PE+G+E +  G++TTF G S+YQ++I++L P+G+G L+   E RK
Sbjct: 66  SSVIWKGGWSRLKVKPEQGMEVIATGRMTTFAGQSRYQLVIDTLEPAGAGALMALFEARK 125

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           K L  EGLF+ + K P+P +P++I V+TSPTGAVIRDIL R+  RFP+ V+++P  VQG+
Sbjct: 126 KALEAEGLFAAERKRPLPPMPQVIGVVTSPTGAVIRDILHRLRDRFPVHVLVWPAVVQGE 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +CPK +   +   N L      PRPD++I+ARGGGS+EDLW FNDE + RA+A SSIP+I
Sbjct: 186 QCPKSVVAGVEGFNALPTDGPVPRPDVLIVARGGGSLEDLWGFNDEAVARAVAASSIPVI 245

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHETD TL DY AD RAPTPT AAEMAVPV+  L   L  L  RL   I   ++ + 
Sbjct: 246 SAIGHETDVTLIDYVADRRAPTPTAAAEMAVPVRMDLSGRLDALNVRLTQRIGHHLEAQS 305

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L S  + L   +  +  +  R DR    L  +L++ + R  +        + +  +  
Sbjct: 306 LALQSAARGLGRKESLIEPAEQRFDRAVSHLTQSLKVRVERATQRMERAAGGLSAALVTA 365

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +    + +    Q +     +         + K+    +     +  +      +KK+ 
Sbjct: 366 AVAMKAETLKGMSQRLITAPPRRWEQA----RSKVISARLSPHLVRRSLDRGGEEVKKIG 421

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+  +    +      +    R+L S +Y+  L RG+  + D +   I   R +     
Sbjct: 422 GRLGRLTRENVDRKSARLDDQARLLHSLSYQGVLARGFALVLDESQGVIRSPRQMRAGET 481

Query: 485 ILINFFDGQANAIV-----INKAPPKEQPTKKCQLHNNKREKQGTQ 525
             + F +G+                     +K       R+  G+Q
Sbjct: 482 YHLRFAEGEVPVRHLIEGETKGPAAASSAARKTPQAKTSRKSDGSQ 527


>gi|146276686|ref|YP_001166845.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           ATCC 17025]
 gi|166232360|sp|A4WQ76|EX7L_RHOS5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|145554927|gb|ABP69540.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 519

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 192/534 (35%), Positives = 279/534 (52%), Gaps = 22/534 (4%)

Query: 1   MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+        + + PEY+VSELS  +K ++E     V VRGEI G     +SGH YF LK
Sbjct: 1   MSDLFEDPAPARNTPEYTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + I AI WKG   ++   PEEG+E +  G++TTFPG SKYQII+E + P+G+G L+ 
Sbjct: 60  DDRAVIAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKR+  L  EGLF    K P+PF+P++I V+TSP+GAVIRDIL R+  RFP  V+I+P
Sbjct: 120 MLEKRRAALAAEGLFDAARKRPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++C  E+A AI   N L +G   PRPD++I+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPDGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L    ARL+     
Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLDLLAGLDGQGARLSRCAAE 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+ +   L  L +ALP  D  ++    R D     L   L   +  +      +   ++
Sbjct: 300 TIRRRDQRLRDLSRALPRLDSLVAGPSQRFDLWSARLSGALGQSVAARRARLEPLGAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIV---KQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
              L   + + +  + ++ + +E  +    +  R  F     ++A           R   
Sbjct: 360 PRLLADLVARQKDRLADRGRGLETCLGRRSERARDRFEALSGRLAPAFARLVAESERTNR 419

Query: 416 LHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                   +          ++      +    R+ Q+  Y+ TL+RGY  ++  +   +T
Sbjct: 420 RDAAALGALAARLEAAPEARLLRLADRLEALDRLRQTLGYRETLRRGYAVVR-ADGEVVT 478

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            K        + I F DG+                   +     + +   QG L
Sbjct: 479 TKTAAERAASLEIEFQDGRLTL--------------GARKPRKGKAEPPAQGSL 518


>gi|254293365|ref|YP_003059388.1| exodeoxyribonuclease VII large subunit [Hirschia baltica ATCC
           49814]
 gi|254041896|gb|ACT58691.1| exodeoxyribonuclease VII, large subunit [Hirschia baltica ATCC
           49814]
          Length = 559

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 185/537 (34%), Positives = 278/537 (51%), Gaps = 20/537 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            + PE SVSELS  LK  VE   S+V VRGE+ G   +  SGH Y  LKD+ + ++ I+W
Sbjct: 26  SNSPEMSVSELSNRLKRTVEDAYSYVRVRGEL-GRVTLAKSGHLYVDLKDDKAVLNTIMW 84

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG ++K+ F PEEG+E +  G+++T+PG S YQ+I ES+ P+G G L+  LE+RKKKL  
Sbjct: 85  KGQVSKLPFKPEEGLEVIAEGRLSTYPGRSNYQMIAESMRPAGVGALMQLLEERKKKLAA 144

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189
           EGLF+ +HK  +PF+P+ I V+TSPTGAVIRDIL R+  RFP  V+I+P  VQG+    +
Sbjct: 145 EGLFNPEHKKELPFLPETIGVVTSPTGAVIRDILHRVKERFPTHVLIWPALVQGEHAAAQ 204

Query: 190 IANAILQLNTLKE-GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +A  I   N +    R   RPD+II+ARGGGS+EDLW FNDE +VRA+  S IPIISA+G
Sbjct: 205 VAGGIRGFNAIGPAARKIKRPDLIIVARGGGSVEDLWPFNDEDVVRAVFESEIPIISAVG 264

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TL D+ +D RAPTPTGAAE+A+PV+  L ++   L AR    + R +      L 
Sbjct: 265 HETDTTLIDFVSDRRAPTPTGAAEIALPVRAELIATTDALGARGKRALQRGVDTSKVELR 324

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           ++   +P  +  +   R RLD    +L   L+ I+ R         + ++   L   + +
Sbjct: 325 AVTARMPRPEMLVQGVRQRLDYASEKLGFALKDIVVRMRSRLQQASSGLQPLALQREMVR 384

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +          +++                  L    +N        ++    R  
Sbjct: 385 RKTALDTLYMRASFALRRDAGDRSKLLHGIYGRF--LARDPRNTFGRKQDLVEATFHRST 442

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +   I   + ++    R+L S +++N L RG+  +Q  N   +    ++ +  R+ + 
Sbjct: 443 VAMERLIGKKYENLETVNRLLSSVSHENVLARGFVLVQRMNGELVRHASDVDSSERLRLQ 502

Query: 489 FFDGQANAIVINKAPPKEQP----------------TKKCQLHNNKREKQGTQGELF 529
           F D +       K P +                   +   +         G QG+LF
Sbjct: 503 FIDDEVRVTSDPKTPQEAPRIVRETEPQTTQLGGIASAPTKKIVKPPSGSGGQGDLF 559


>gi|259415863|ref|ZP_05739783.1| exodeoxyribonuclease VII, large subunit [Silicibacter sp.
           TrichCH4B]
 gi|259347302|gb|EEW59079.1| exodeoxyribonuclease VII, large subunit [Silicibacter sp.
           TrichCH4B]
          Length = 502

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 189/531 (35%), Positives = 277/531 (52%), Gaps = 31/531 (5%)

Query: 1   MNPFSQKNS--LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+      S   + PE+SVSE+S  +K  +E +   V VRGE+ G      SGH Y+ +K
Sbjct: 1   MSDLLDDPSPGQNAPEFSVSEISGEIKKTLEGSFGRVRVRGEV-GRVFKARSGHLYYDIK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +    WKG ++ +  +PEEG+E +V G++T F G SKY + ++ +  +G G L+ 
Sbjct: 60  DDRSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK +L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++P
Sbjct: 120 LLEKRKAQLASEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++ RA+A 
Sbjct: 180 VAVQGSNCAPEVARAIEGFNNLSPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAVAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+  L   + N  AR+ N   R
Sbjct: 240 SQIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEHAVPVRLELLGWVENQSARMANATSR 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  + +ALP  D  L   R RLDR+   L + L   + R+    +     ++
Sbjct: 300 AVQLRRQRLGDVARALPRPDTLLETPRQRLDRVSDRLPNALIAGVQRRKLTLSERAATLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   ++  +  +      +                             +        
Sbjct: 360 PATLRSLVEARKDRLKNLSSRLT------------------------LRPIQQDTARKRD 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + ++  R+    + +I+     +S T R L+  +YK TL RGY  ++D +   +T    
Sbjct: 396 ALDRISKRLNAAQTSRIERHADRLSATARQLEILSYKATLSRGYAVVRDGD-ALVTNTLG 454

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 + I F DG      I       + T          +  G QG LF
Sbjct: 455 ARNAAALSIEFADGTVE---IGANAATPKKTAPKPAAPKPPKTPGEQGSLF 502


>gi|237732486|ref|ZP_04562967.1| exodeoxyribonuclease VII large subunit [Citrobacter sp. 30_2]
 gi|226908025|gb|EEH93943.1| exodeoxyribonuclease VII large subunit [Citrobacter sp. 30_2]
          Length = 457

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 236/495 (47%), Gaps = 53/495 (10%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+ +++   
Sbjct: 3   SSQTTSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+                                 
Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEIVS------------------------------- 264

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                    N  + L   ++   RL       ++  I  + R F  + +R++       +
Sbjct: 265 --------RNQLELLRQIQHGQQRLEM----AMDYYIANRTRRFTQLHHRLQQQHPQLRL 312

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +Q +   ++  ++     ++     L   ++  + RI+   T I++L  R
Sbjct: 313 ARQQTVLERLRQRMNFALENKIKQANQRQQRVSQRLS--QQNPQPRIYRAQTRIQQLEYR 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  ++ +           L++ +  +TL RGY+    T+   + Q + + T   + 
Sbjct: 371 LAENIRARLSAQRERFGNVVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKTGDVLT 430

Query: 487 INFFDGQANAIVINK 501
               DG   + V   
Sbjct: 431 TRLSDGWVESEVKGI 445


>gi|90419936|ref|ZP_01227845.1| exodeoxyribonuclease VII, large subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335977|gb|EAS49725.1| exodeoxyribonuclease VII, large subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 545

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 212/547 (38%), Positives = 307/547 (56%), Gaps = 20/547 (3%)

Query: 1   MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+   +   + +  EYSVSE+S  LK  VE    HV +RGE+SGYRG HSSGHAYFSLKD
Sbjct: 1   MSRSPESAPMSNVAEYSVSEISGALKRTVEERFGHVRLRGEVSGYRGPHSSGHAYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +RIDA+IW+   +K+ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  
Sbjct: 61  DRARIDAVIWRTAFSKLAFKPEEGLEVVATGKLTTYPGSSKYQIVIEQIEPAGAGALMAL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           L +R++KL  EGLF+ + K P+PF+P++I V+TSPTGAVIRDI  RI+ RFP+ ++++PV
Sbjct: 121 LNERRRKLEAEGLFAAERKRPLPFMPRVIGVVTSPTGAVIRDIHHRIADRFPVHLLVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   NT  E     RPD+II+ARGGGS+EDLW FNDE++VRA A S
Sbjct: 181 RVQGETSGEEVARAIDGFNTFPESGAIARPDLIIVARGGGSLEDLWGFNDEVVVRAAAAS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETDWTL D+AAD+RAPTPTGAAEMAVPV+  L +++  L AR +  + R 
Sbjct: 241 AIPLISAVGHETDWTLIDHAADMRAPTPTGAAEMAVPVRADLLAAVAALAARHSGAVSRR 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   + +  +ALP+ D  L+  R RLD     L   L + +  K R +  +  R+  
Sbjct: 301 LDQERRAVAATARALPSPDMLLALPRRRLDEASTSLGQCLRVNLSEKRRAYGEVATRLAP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +++ R  +   Q H    V   ++      +   A L     +   R       
Sbjct: 361 SSLETLLREKRADLRHHQSHAAHAVTGLVQRKRQRFERIAADLQP--HRINARAEAARLR 418

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +  L  R+    +        +++   R+  S      L+RGYT ++  +   I +   L
Sbjct: 419 LGTLGERLTAAQALAATGRRQALASAWRVADSLNPMRVLERGYTIVRGPDGEPIVRASGL 478

Query: 480 ATKTRILINFFDGQANAIVINKAP-----------------PKEQPTKKCQLHNNKREKQ 522
                  + F   Q    V    P                   E P  + +     +  +
Sbjct: 479 EPGMAFEVQFAHDQRRGAVATGEPVAGITPAAAGDAAAEPAETEPPKPRAKRRAAAKATE 538

Query: 523 GTQGELF 529
             QG LF
Sbjct: 539 EDQGTLF 545


>gi|240949395|ref|ZP_04753736.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor NM305]
 gi|240296144|gb|EER46800.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor NM305]
          Length = 486

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 12/492 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   +V++L+Y ++H++E+ L  + + GEIS +     SGH Y +LKD ++++   ++K 
Sbjct: 2   NNILTVTQLNYSVRHLLETELGQIWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMFKM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             +++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E+ K KL  +G
Sbjct: 61  KNSRVTFYPQNGMQVLVRASVSLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKMKLAAQG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ +HK  +P   K + +ITS +GA ++DIL  +  R P L V+I+P  VQG E  ++I
Sbjct: 121 LFAQEHKKALPDFVKRVGIITSSSGAALQDILNILKRRDPSLAVVIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VQTIDLANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAYAIYRSEIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +    +N    R+   K+     L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELIRQLQHHFNMVNLAFDRIWHEKLTRFQQL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + L   + R ++L   +E +++ ++  +      +  R++       +  
Sbjct: 295 NLRLNAQHPSKYLHVFKIRFEQLAYRMEKSVKSLLSARRNQLTQVFLRLQPHHPQRKLAM 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             + + +++  + Q + Q+L     + +     +         +I     +I +L  ++ 
Sbjct: 355 QCEQLAQREVRLHQQMSQYLSRKKQDWENLTKRIES--TSLPYQIEKKQQYITRLAQQLS 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           + +  +    + S       L   +    L RGY+  Q +  + +T  + +A   +++  
Sbjct: 413 YAMDKRYLKEYQSFQALCTRLDGLSPLKILGRGYSITQTSKGHILTNAKEVAVGDKLITQ 472

Query: 489 FFDGQANAIVIN 500
              GQ  + V+ 
Sbjct: 473 LETGQIISEVME 484


>gi|56696229|ref|YP_166586.1| exodeoxyribonuclease VII large subunit [Ruegeria pomeroyi DSS-3]
 gi|81820092|sp|Q5LTR9|EX7L_SILPO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|56677966|gb|AAV94632.1| exodeoxyribonuclease VII, large subunit [Ruegeria pomeroyi DSS-3]
          Length = 482

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 181/517 (35%), Positives = 266/517 (51%), Gaps = 36/517 (6%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           PE++V+E+S  +K  +E +   + VRGE+ G      SGH Y+ +KD+ + +    WKG 
Sbjct: 2   PEFTVTEISGEVKRTLEGSFGRIRVRGEV-GRVFQARSGHLYYDIKDDRNVLACTTWKGQ 60

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           +  +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+  LEKRKK+L  EGL
Sbjct: 61  VASLSVVPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMALLEKRKKQLEAEGL 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192
           F+ + K P+P++P+II VITSP GAVIRDIL R+  RFP +V+I+PV VQG  C  E+A 
Sbjct: 121 FAPERKRPLPYLPQIIGVITSPQGAVIRDILHRLRDRFPRKVLIWPVAVQGANCAPEVAR 180

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N    G   PRPD++I+ARGGGSIEDLW FN+E++ RA A S IP+ISA+GHETD
Sbjct: 181 AIEGFNMFSPGGALPRPDLLIVARGGGSIEDLWGFNEEIVARAAAASQIPLISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL D+ +D RAPTPT AAEMAVPV+  L +      ARL+      ++ +   L  L +
Sbjct: 241 TTLIDFVSDRRAPTPTAAAEMAVPVRLELLAWTGEQGARLSRAASDAVQRRAQRLRDLSR 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           ALP  D  L   R RLDR    L   L   + R+      +   ++   L   +   R H
Sbjct: 301 ALPRPDSLLDTPRQRLDRAAERLPAALTQGVQRRRLRLAELSAPLRPASLRALVSARRDH 360

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +      +                             +  I      + +L  R+    +
Sbjct: 361 LAHLGSRLS------------------------PRALEREIAAQGERLTRLSDRLNSAQT 396

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
            +I+     +    R+ ++  YK TL RGY  ++D     +T +   A    + I F DG
Sbjct: 397 TRIERLRQRLESADRLRETLGYKATLARGYAVVRDDQGALLTTRAQAAKAAALQIEFADG 456

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             +                 +  +  ++K   QG LF
Sbjct: 457 TLD-----------TGGAPAKPASKPKQKPPEQGSLF 482


>gi|146312641|ref|YP_001177715.1| exodeoxyribonuclease VII large subunit [Enterobacter sp. 638]
 gi|166919633|sp|A4WD84|EX7L_ENT38 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|145319517|gb|ABP61664.1| exodeoxyribonuclease VII, large subunit [Enterobacter sp. 638]
          Length = 457

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 148/508 (29%), Positives = 234/508 (46%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     Y+VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   SSQSPSIYTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 SAEGLFDQQFKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARHE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ +D+RAPTP+ AAE+    ++ L   + N + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVSDMRAPTPSAAAEVVSRNQQELLRQMQNGQQRLEMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L   R +   +RL + +   L+  + R   H   +  R+       
Sbjct: 296 FTQLHHRLQQQHPQLRLERQQTVLERLRQRMNFALDNQLKRVVSHQQRMTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIYRTQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + Q + +     
Sbjct: 374 -----NLRARLSTTRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKAGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V    P K+   KK 
Sbjct: 429 MTTRLADGWVESEVKGITPAKKTRKKKP 456


>gi|126733161|ref|ZP_01748908.1| Exonuclease VII, large subunit [Roseobacter sp. CCS2]
 gi|126716027|gb|EBA12891.1| Exonuclease VII, large subunit [Roseobacter sp. CCS2]
          Length = 495

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 182/495 (36%), Positives = 277/495 (55%), Gaps = 6/495 (1%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           + F  + + + PE+SVSE+S  +K  +E   SHV V+GEI G     +SGH Y  LKD+ 
Sbjct: 3   DLFEDEPADNTPEFSVSEISGAVKKAIEGGFSHVRVKGEI-GRVSRPASGHIYMDLKDDR 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +  +IWKG    +   PEEG+E +  GK+TTFPG SKYQ++IE + P+G+G L+  LE
Sbjct: 62  AVLAGVIWKGRAQGLAHRPEEGMEVVATGKLTTFPGQSKYQMVIEDIAPAGAGALMAMLE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           KRK  L  EG F+ + K  +P++P+II V+TSP+GAVIRDIL R+  RFP +V+++PV V
Sbjct: 122 KRKAALAAEGFFAPERKKELPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVAV 181

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG +C  E+A AI   NTL  G   PRPD++I+ARGGGS+EDLW FN+E++ RA A S I
Sbjct: 182 QGQKCAPEVAAAIEGFNTLTPGGALPRPDLLIVARGGGSLEDLWGFNEEVVARAAAASDI 241

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL D+ +D+RAPTPT AAE+AVPV+  L +      ARL+  +   + 
Sbjct: 242 PLISAVGHETDTTLIDFVSDMRAPTPTAAAELAVPVRMELLAWADQQGARLSRALTTGLT 301

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   +  L +ALP  D  +   R RLD L   L   L     +  +        ++   
Sbjct: 302 QRQQRVRDLGRALPQVDALVEGPRQRLDYLGERLPAALTGAAAK--KRLQMSEAALRPGI 359

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + ++R+ +      +   +K+  R      ++      +     ++R+      + 
Sbjct: 360 LSRRLAEDRRRLDGLSDRLGPALKRRSREARTTLEQ--TSRGLRAGVLQDRVSRQSDRLI 417

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
             + R+    S +     + +    R+ ++  Y  TLKRGY  ++  +   +T K     
Sbjct: 418 GTLRRLSDRASRQQAERLSKLEALDRLRETLGYVETLKRGYAVVRG-DGAVVTTKGAAQK 476

Query: 482 KTRILINFFDGQANA 496
              + I F DG+ + 
Sbjct: 477 AKALEIEFADGRLHV 491


>gi|163797950|ref|ZP_02191892.1| Exodeoxyribonuclease VII [alpha proteobacterium BAL199]
 gi|159176744|gb|EDP61315.1| Exodeoxyribonuclease VII [alpha proteobacterium BAL199]
          Length = 494

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 181/529 (34%), Positives = 272/529 (51%), Gaps = 41/529 (7%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +P +     + PE++V E+S  +K  VES    V VRGEIS       SGH Y SLKD+ 
Sbjct: 6   SPTAPAPG-NLPEFTVGEVSLAVKRTVESAFERVRVRGEIS-RPTRAGSGHLYLSLKDDQ 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + ++A+ W+G   ++   PEEG E +  GK+TT+PG SKYQ++IE +  +G G LL  LE
Sbjct: 64  AVLEAVCWRGQAQRLSIQPEEGTEVIATGKLTTYPGRSKYQMVIEQMELAGEGALLKLLE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
            R+K+L  EGLF  + K PIPF+P +I V+TSPTGAVIRDIL R++ RFP+ VI++PV V
Sbjct: 124 DRRKRLTAEGLFEVERKRPIPFLPSVIGVVTSPTGAVIRDILHRLADRFPVHVIVWPVLV 183

Query: 182 QGDECPKEIANAILQLNTLKE-GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           QG+   ++IANAI   N L   G    RPD++I+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 184 QGEGAKEQIANAIAGFNALPATGGKVARPDLLIVARGGGSLEDLWAFNEEIVVRAAAASD 243

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+  L + +    AR+ + + R +
Sbjct: 244 IPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRADLVARIAENAARIAHAVARRL 303

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L  L + L +    +  ++ RLD   +    +L   + R               
Sbjct: 304 TDGTTRLTGLARGLGDPAARIEQAQQRLDYAGQTAGASLTRTLERLADRVER-------- 355

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                                ++          E +   A+  +     + R+       
Sbjct: 356 ---------------------RLPTPFEILARTEGRLNAALRGLRIAPVEQRLDQTSREF 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L    +  +   +K     +    R+L++ ++   L RG+  ++D +   +T   +  
Sbjct: 395 IRLAKASDSAVDRFLKVESDRLKALERVLEANSFVRVLDRGFALVRDADGTPVTSADDAR 454

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               + + F DG+  A+V              +  +       TQ  LF
Sbjct: 455 DGQAVTLRFRDGERAAVV---------GAGGTRSRSKTPVAPPTQETLF 494


>gi|315500485|ref|YP_004089288.1| exodeoxyribonuclease vii, large subunit [Asticcacaulis excentricus
           CB 48]
 gi|315418497|gb|ADU15137.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis excentricus
           CB 48]
          Length = 547

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 183/551 (33%), Positives = 272/551 (49%), Gaps = 35/551 (6%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               +  + P +SVSEL+  LK  +ES   HV +RGEIS     H+SGH Y +LKD+ + 
Sbjct: 7   SPVDSQSNSPPWSVSELAGALKRTIESAYDHVRLRGEISKVT-RHTSGHVYLTLKDDRAA 65

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID +IWKG +++++  P+ G+E +V GK+TTFP SSKYQI+IESL  +G G LL  LE+ 
Sbjct: 66  IDGVIWKGNISRLKAQPQAGLEVIVTGKLTTFPASSKYQIVIESLEAAGIGALLAQLERT 125

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K KL  EGLF+ + K  +PF PK I VITSPTGAVIRDIL RI  R+P RVI++PV VQG
Sbjct: 126 KAKLHGEGLFAAERKKRLPFAPKTIGVITSPTGAVIRDILHRIRDRWPCRVIVWPVIVQG 185

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D  P +I  A+       +    PRPD++I+ARGGGS+EDLW FNDE + RA+A  ++P+
Sbjct: 186 DAAPAQIIQALNGF----QSGAVPRPDVLIVARGGGSVEDLWAFNDEGLARAVAACTLPV 241

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL D+ +D RAPTPTGAAEMA PV   L+  +++LE R      + ++ +
Sbjct: 242 ISAVGHETDTTLIDFVSDRRAPTPTGAAEMATPVLSELRGFVLDLERRRLGSFDQALRNR 301

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              +  L +ALP     +  ++ RLD     L   L   +      F     R     L 
Sbjct: 302 RERVALLGRALPKPQDLIDAAQQRLDYAAHRLGGGLLRNLNAHDTAFARTAARFSPALLE 361

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                  + + +  +     + + +    +E     A L      T   +      + +L
Sbjct: 362 RPRHLKAERVTQLSERATAALTRGVERQRVEFTRLSARLTPAL--TLRPLDLKREALNRL 419

Query: 424 ITRIEFILSHKIK------------------------SCHTSVSITTRILQSFAYKNTLK 459
             R +  L+ ++                              +    ++  S      L 
Sbjct: 420 NQRFDAALNRRLDDSARRARLPELEQRLAAALARLLSQKSERLHRLDQLRLSLDPDRPLN 479

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFF-DGQANAIVINKAPPKEQPTKKCQLHNNK 518
            G+  +   + + +T    +     + + F  D   + +  +       P  +       
Sbjct: 480 LGFARVSRADGHLVTSPEGVGVGEALTLTFKGDRTLDVVASDGT---SAPPTRPATKPRP 536

Query: 519 REKQGTQGELF 529
              +  QG LF
Sbjct: 537 TPLKPEQGSLF 547


>gi|307296250|ref|ZP_07576077.1| exodeoxyribonuclease VII, large subunit [Sphingobium
           chlorophenolicum L-1]
 gi|306878052|gb|EFN09275.1| exodeoxyribonuclease VII, large subunit [Sphingobium
           chlorophenolicum L-1]
          Length = 499

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 182/531 (34%), Positives = 269/531 (50%), Gaps = 55/531 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             +++  + P  SVSELS  LK  VE    HV +RGEISG++    SGH Y  LKD+++ 
Sbjct: 17  AEERSGDNAPPLSVSELSALLKRTVEDRFGHVRLRGEISGFK-RAGSGHIYLCLKDDNAV 75

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKG   ++ F P++G+E +  GK+TT+PG SKYQI+I+ +  +G G L+  LEK 
Sbjct: 76  IDGVMWKGGAARLPFAPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKL 135

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K  +PF+P++I V+TSPTGAVIRDIL R+  R P +V+++PV VQG
Sbjct: 136 KQKLAAEGLFDRSAKRRLPFMPRVIGVVTSPTGAVIRDILHRLEDRCPTQVLLWPVLVQG 195

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               ++IA A+   + ++ G   PRPD++I+ARGGGSIEDLW FN+E++VRA+A  SIPI
Sbjct: 196 QGAAEQIARAVRGFSAMQPGGPIPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAECSIPI 255

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAAD+RAPTPT AAEMAVPV+  L + L     R++  + R     
Sbjct: 256 ISAVGHETDTTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLTEQGLRMDRAVRRGAAQA 315

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L    + +P  D  L+  R RLD+L   L   L   I     H       ++   L 
Sbjct: 316 RERLEMQARLMPTPDTLLAPQRQRLDQLSDGLGSALRHRIADARTHLGQASGALRPALLR 375

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + +  + +   Q   + + + +                                    
Sbjct: 376 QYVSRAAERVARLQLRPDYLERVYRDRATAF----------------------------- 406

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                                 +R+  S      L+RG+  +    +  +    +     
Sbjct: 407 -------------------DRLSRLFTSVNPDLPLQRGFARVM-AGDRLVKSVADAQAAG 446

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ-----GTQGELF 529
            + + F DG  +A +   AP ++ P +     +    K        Q +LF
Sbjct: 447 AVSLRFRDGAVDATIGGAAPLEKPPAEAISNPSRPPRKPRGGKETGQQDLF 497


>gi|84515408|ref|ZP_01002770.1| Exonuclease VII, large subunit [Loktanella vestfoldensis SKA53]
 gi|84510691|gb|EAQ07146.1| Exonuclease VII, large subunit [Loktanella vestfoldensis SKA53]
          Length = 499

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 190/500 (38%), Positives = 280/500 (56%), Gaps = 10/500 (2%)

Query: 1   MNPFSQKNSL----DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M+ F    +     + PE+SVSE+S  +K  +E   +H+ VRGE+ G     SSGH Y  
Sbjct: 2   MDLFEDGPTDKSADNTPEFSVSEISGAVKKTIEGGFAHIRVRGEL-GRISRPSSGHIYLD 60

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD+ S +  IIWKG    +   PEEG+E +  GK+TTFPG SKYQ+IIE + P+G+G L
Sbjct: 61  LKDDRSVLSGIIWKGRATALTHRPEEGMEVIATGKLTTFPGQSKYQMIIEDIQPAGAGAL 120

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176
           +  LEKR+  L  EGLF    K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V++
Sbjct: 121 MAMLEKRRVMLAGEGLFDAARKKPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLV 180

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           +PV VQG +C  E+A AI   N L  G   PRPD+II+ARGGGS+EDLW FN+E++VRA 
Sbjct: 181 WPVAVQGQKCAAEVAAAIDGFNRLTPGGALPRPDLIIVARGGGSLEDLWGFNEEIVVRAA 240

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A S IP+ISA+GHETD TL D+AAD+RAPTPT AAE+AVPV+  L + +    ARL   +
Sbjct: 241 AASDIPLISAVGHETDTTLIDFAADIRAPTPTAAAELAVPVRIELLAFVDQQGARLVRAL 300

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
              ++ +   L  L +ALP  D      R RLD L   L   L     +K    +     
Sbjct: 301 SNGVQTRRQRLRDLARALPRVDTLADGPRQRLDYLADRLPAALRQAAAQKRLQLSDAA-- 358

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           ++   L   + ++R+ +      +   +++  R   +  +   A   +  +  + R+   
Sbjct: 359 LRPAILQRRLAEDRRRLSALSDRLAPALQRRSRDAAVTLER--AGRGLRCDLLQTRLDRQ 416

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              +  ++ R+    + +       ++   R+ ++  Y  TLKRGY  ++   +  +T  
Sbjct: 417 AERLSSVLARLSDRATRQQTERTARLAALDRLRETLGYMETLKRGYAVVR-AGDVLVTDT 475

Query: 477 RNLATKTRILINFFDGQANA 496
              A    + I F DG+   
Sbjct: 476 VAAAKADHLEIQFADGRIAV 495


>gi|261492150|ref|ZP_05988721.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495920|ref|ZP_05992340.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308417|gb|EEY09700.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312223|gb|EEY13355.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 530

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 146/492 (29%), Positives = 248/492 (50%), Gaps = 12/492 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               +V++L+Y ++H++E  +SH+ + GEIS +     SGH Y +LKD+ +++   ++K 
Sbjct: 46  SNILTVTQLNYSVRHLLEMEMSHIWLTGEISNF-SQPVSGHWYLTLKDDKAQVRCAMFKM 104

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   +T +     YQ+IIES+ P+G G L    E+ K KL  +G
Sbjct: 105 KNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKAKLSAQG 164

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ +HK PIP   K + +ITS +GA ++DIL  +  R P L V+I+P  VQG E  ++I
Sbjct: 165 LFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDPSLSVVIYPALVQGKEATQDI 224

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N   E       D++I+ RGGGS+EDLW FN+E +  AI +S IPIISA+GHE
Sbjct: 225 VNMIELANRRNE------CDVLIVGRGGGSLEDLWCFNEESVAYAIYHSQIPIISAVGHE 278

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    +  L+  L +   ++N    R+  +K N    L
Sbjct: 279 TDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKVNLAFDRVWNHKFNRFQQL 338

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + R D +   LE  +  ++  K +    +  R+        I++
Sbjct: 339 PLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQVGKELNVRLIHQHPQKQIER 398

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             Q + + +  +    +   +    ++K K       R     +++   T + K+  R+ 
Sbjct: 399 QSQMLKQLELKLH--WQMEQQLSKKQQKWKNITQRFERNPLPYQLYQQQTMVAKMSQRLA 456

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           + +   +             L   +    L RGY+  Q  +   +T   N+     I+  
Sbjct: 457 YSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQTKDGKTLTSTENIERGEAIITQ 516

Query: 489 FFDGQANAIVIN 500
              G+  + V++
Sbjct: 517 LKTGKIISQVVD 528


>gi|254419247|ref|ZP_05032971.1| exodeoxyribonuclease VII, large subunit [Brevundimonas sp. BAL3]
 gi|196185424|gb|EDX80400.1| exodeoxyribonuclease VII, large subunit [Brevundimonas sp. BAL3]
          Length = 533

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/526 (34%), Positives = 287/526 (54%), Gaps = 7/526 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           +     ++P  S+SELS+ LK  +E    HV +RGE+S     H+SGH Y +LKD+ S I
Sbjct: 14  AAAPRDNNPPLSISELSFALKRTLEERFGHVRLRGEVSKVN-RHASGHIYLTLKDDKSAI 72

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           D +IWKG++  +   PE G+E +V GKIT++P  S YQI+IES+  +G+G LL  LE+ K
Sbjct: 73  DGVIWKGSVRGLGVQPEAGLEVIVTGKITSYPARSSYQIVIESMEAAGAGALLAQLERLK 132

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
            +L EEGLF    K P+P  P+ I VITSPTGAVIRD+L RI+ R+P RVI++PV VQG+
Sbjct: 133 VRLREEGLFEPGRKKPLPQFPRTIGVITSPTGAVIRDVLHRIAERWPCRVIVWPVVVQGE 192

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               +++NAI   + +      PRPD++I+ARGGGS+EDLW FNDE + R +A + IPII
Sbjct: 193 AACGQVSNAIRGFDAMTVDGPIPRPDLLIVARGGGSVEDLWCFNDEGLARTVAAARIPII 252

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+ +D RAPTPTGAAE+A PV   L+ ++ +L+ R+     RLI+ + 
Sbjct: 253 SAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRYAVADLDRRMVLAGGRLIEDRR 312

Query: 305 NTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             L ++ + LP   +  L+ ++ RLD     L   L+  +    RH      ++    L 
Sbjct: 313 TRLRAVARGLPARPEDLLALAQQRLDNAASRLGSGLQRNVALHERHLAVTGGKLSPALLR 372

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I++ +  +      +   ++  +        +  A L         R+      ++ L
Sbjct: 373 ARIERGQDRLRGAGDRLGAALQAGVARGERRLLQVSARLSPAP--LHRRLDQREARLQAL 430

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R++ ++  +++     ++  TR L +       K G+  +++ + ++IT    L    
Sbjct: 431 GARLDGVMPRRLERDADRLAGLTRALATLDPGRP-KPGFARVENPDGDWITSAATLEAGQ 489

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + + F DG   AI+          +   +     +     QG+LF
Sbjct: 490 AVRLVFGDGARGAIIDGG--DGRTASAPARPAPRPKPAAPGQGDLF 533


>gi|83858533|ref|ZP_00952055.1| putative exodeoxyribonuclease protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853356|gb|EAP91208.1| putative exodeoxyribonuclease protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 484

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 189/532 (35%), Positives = 278/532 (52%), Gaps = 54/532 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +  ++ + PEY+VSELS  LK  VE    HV VRGE+ G   +  SGH Y  +KD+ + 
Sbjct: 1   MTDASASNTPEYTVSELSNALKRTVEQAYDHVRVRGEL-GRVTVAKSGHVYLDMKDDKAV 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKG    + F PEEG+E +  G+++TFPG SKYQ+IIE + P+G G L+  LE R
Sbjct: 60  IDGVMWKGVAAHLNFRPEEGLEVIAEGRLSTFPGRSKYQMIIERMEPAGEGALMALLEAR 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           KK L  EGLFS   K  +PF+P++I V+TSPTGAVIRDIL R+  RFP+ V+++PV VQG
Sbjct: 120 KKALAAEGLFSPDGKRALPFLPRVIGVVTSPTGAVIRDILHRLEDRFPVHVLLWPVLVQG 179

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++   +IA+AI   N ++ G   P PD++I+ARGGGSIEDLW FN+E +VRA A S IP+
Sbjct: 180 EKAADQIAHAIEGFNAIEPGGPVPVPDVLIVARGGGSIEDLWCFNEERVVRAAAASRIPL 239

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYA+D RAPTPTGAAE+AVPV+  L   +    ARL + ++R +  K
Sbjct: 240 ISAVGHETDTTLIDYASDRRAPTPTGAAEIAVPVRRELVERISTTTARLMSALVRGLDRK 299

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L S  + LP+   TL+ +  +LD +   L    +  + RK         +++   L 
Sbjct: 300 AADLKSASRGLPSPRATLNENNQKLDFIASRLNGAAQSGLERKQTRLQAAALQMRPTALR 359

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
            ++        +    +EQ                                         
Sbjct: 360 RDLAIKGDRFQQSGARLEQA---------------------------------------- 379

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     ++     ++      L++ ++K+ L+RG+  ++D +   + Q   L +  
Sbjct: 380 -------FRRELGDQARTLGSLGARLEALSHKSVLRRGFALVKDESGALVRQGAALTSGQ 432

Query: 484 RILINFFDGQANAIVINKAPPKEQPT------KKCQLHNNKREKQGTQGELF 529
            + + F D    AIV   +              K    + K+     QG LF
Sbjct: 433 AVTLVFEDTTRGAIVDGASSASPSSASKPAARPKSATKSRKKPSSPDQGSLF 484


>gi|170744124|ref|YP_001772779.1| exodeoxyribonuclease VII, large subunit [Methylobacterium sp. 4-46]
 gi|168198398|gb|ACA20345.1| exodeoxyribonuclease VII, large subunit [Methylobacterium sp. 4-46]
          Length = 507

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 198/521 (38%), Positives = 283/521 (54%), Gaps = 32/521 (6%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +  E+SV++L+  LK  +E    HV +RGEISGYRG H SGHAYFSLKD  ++IDA+I
Sbjct: 17  PANLTEWSVTDLAAALKRTLEDAFGHVRLRGEISGYRGPHGSGHAYFSLKDGGAKIDAVI 76

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           WKGTL ++   P+EG+E +  G+ITTFPG S YQI+I+SL P+G+G  +  LE+R++ L 
Sbjct: 77  WKGTLARLRHRPKEGLEVVATGRITTFPGKSAYQIVIDSLEPAGAGAWMALLEERRRLLA 136

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLF    K P+P++P+++ V+TSPTGAVIRDIL R++ RFP  V+++PV+VQG+   +
Sbjct: 137 AEGLFDAARKRPLPYLPRVVGVVTSPTGAVIRDILHRLADRFPRPVLVWPVRVQGEGSAE 196

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A AI   N L      PRPD++I+ARGGGSIEDLW FN+E++VRA A S+IP+I+A+G
Sbjct: 197 EVAAAIRGFNALAPDGPIPRPDVLIVARGGGSIEDLWSFNEEIVVRAAAASAIPLIAAVG 256

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TL D+AAD RAPTPTGAAEMAVPV+  L + L  L  R    + RLI+ +   L 
Sbjct: 257 HETDVTLIDHAADRRAPTPTGAAEMAVPVRLDLVADLDGLARRHAASLARLIERRRADLR 316

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L + LP  +  L+  R RLD     L   L             ++  +       ++ +
Sbjct: 317 GLARVLPTPEGLLAVKRQRLDLAEARLRPALGEAARAAQGRLARLLQALGRHPPALHLAR 376

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  +                                R   +  I      +  +  R+ 
Sbjct: 377 ARARLAGIDHR-------------------------PRHALERLIAVRAERLNGVAQRLA 411

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              S  ++      +  + +  S  Y+  L+RGY  + D     + +        RI + 
Sbjct: 412 QAESRDLERRRARFAAASGLFDSLNYRAVLQRGYALVLDAEGRPVAEAEAARAAGRITVE 471

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           F DG+  A+V   APP+    K+             Q  LF
Sbjct: 472 FQDGKVGAVV-EGAPPRRAAAKRGP------AAPARQTSLF 505


>gi|254361538|ref|ZP_04977676.1| exodeoxyribonuclease VII [Mannheimia haemolytica PHL213]
 gi|153093056|gb|EDN74072.1| exodeoxyribonuclease VII [Mannheimia haemolytica PHL213]
          Length = 486

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/492 (29%), Positives = 248/492 (50%), Gaps = 12/492 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               +V++L+Y ++H++E  +SH+ + GEIS +     SGH Y +LKD+ +++   ++K 
Sbjct: 2   SNILTVTQLNYSVRHLLEMEMSHIWLTGEISNF-SQPVSGHWYLTLKDDKAQVRCAMFKM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   +T +     YQ+IIES+ P+G G L    E+ K KL  +G
Sbjct: 61  KNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKAKLSAQG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ +HK PIP   K + +ITS +GA ++DIL  +  R P L V+I+P  VQG E  ++I
Sbjct: 121 LFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDPSLSVVIYPALVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N   E       D++I+ RGGGS+EDLW FN+E +  AI +S IPIISA+GHE
Sbjct: 181 VNMIELANRRNE------CDVLIVGRGGGSLEDLWCFNEESVAYAIYHSQIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    +  L+  + +   ++N    R+  +K N    L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQNELKRQVQHQFDKVNLAFDRVWNHKFNRFQQL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + R D +   LE  +  ++  K +    +  R+        I++
Sbjct: 295 PLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQVGKELNVRLIHQHPQKQIER 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             Q + + +  +    +   +    ++K K       R     +++   T + K+  R+ 
Sbjct: 355 QSQMLKQLELKLH--WQMEQQLSKKQQKWKNITQRFERNPLPYQLYQQQTMVAKMSQRLA 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           + +   +             L   +    L RGY+  Q  +   +T   N+     I+  
Sbjct: 413 YSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQTKDGKTLTSTENIERGEAIITQ 472

Query: 489 FFDGQANAIVIN 500
              G+  + V++
Sbjct: 473 LKTGKIISQVVD 484


>gi|163868905|ref|YP_001610131.1| exodeoxyribonuclease VII large subunit [Bartonella tribocorum CIP
           105476]
 gi|189037855|sp|A9IXA1|EX7L_BART1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|161018578|emb|CAK02136.1| exodeoxyribonuclease VII large subunit [Bartonella tribocorum CIP
           105476]
          Length = 476

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 211/530 (39%), Positives = 304/530 (57%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +N  S+K S  +  E++VSE++  LK +VE    +V VRGEISGYRG H+SGHAYF+LKD
Sbjct: 2   VNLLSEKTSGTNVAEFTVSEIAGALKRVVEEKFGYVRVRGEISGYRGAHASGHAYFALKD 61

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T 
Sbjct: 62  DKARLEAVIWRGVMEKLKFPPEEGMEVVAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK  EEGLF +  K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL V+++PV
Sbjct: 122 LENRKKKFAEEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHVLVWPV 181

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+    E+A A+   N L      P+PD+II+ARGGGS+EDLW FNDE +VRA+  S
Sbjct: 182 RVQGETSGSEVAAAVEGFNALASEGHIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYAS 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +PIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L+  + +L ARL   + R 
Sbjct: 242 DLPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKLDLEVCVASLGARLRKGLARS 301

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L +  + LP++DQ  S  R   D +   L+  L +   +K   F+ +  R+  
Sbjct: 302 FDFHQQKLCAARRGLPSADQLFSLPRRGFDEISSRLQRALCVSYDKKRFSFHALHLRLSP 361

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L    +K ++H  E    + +                                     
Sbjct: 362 RLL--KSEKAQRHTKEYTARLYRAFM---------------------------------- 385

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++   +++ +  R+L+S +Y+N L+RG+  +   N+  I +    
Sbjct: 386 -------------RSVEKKRSALELACRLLKSTSYQNILERGFVLVLGQNHKPIKRLAQF 432

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG  +         +E  +     H   +     QG LF
Sbjct: 433 PESGQINLRFFDGDIHV------ATQEPFSAARSKHKKIKSPSDDQGTLF 476


>gi|238895963|ref|YP_002920699.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330007829|ref|ZP_08306087.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. MS 92-3]
 gi|238548281|dbj|BAH64632.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|328535317|gb|EGF61803.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. MS 92-3]
          Length = 463

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  + R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    ++   + Q + + T   
Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   +K      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461


>gi|152971366|ref|YP_001336475.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|166232356|sp|A6TCC4|EX7L_KLEP7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|150956215|gb|ABR78245.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 463

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  + R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    ++   + Q + + T   
Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   +K      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461


>gi|290508299|ref|ZP_06547670.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. 1_1_55]
 gi|289777693|gb|EFD85690.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. 1_1_55]
          Length = 463

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/513 (28%), Positives = 235/513 (45%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  + R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLDHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    ++   + Q + + T   
Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   +K      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPAKP 461


>gi|288934101|ref|YP_003438160.1| exodeoxyribonuclease VII large subunit [Klebsiella variicola At-22]
 gi|288888830|gb|ADC57148.1| exodeoxyribonuclease VII, large subunit [Klebsiella variicola
           At-22]
          Length = 463

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/513 (28%), Positives = 235/513 (45%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  I R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQIKRAEQRQKRTVQRLDHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    ++   + Q + + T   
Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   +K      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPAKP 461


>gi|206579351|ref|YP_002237142.1| exodeoxyribonuclease VII, large subunit [Klebsiella pneumoniae 342]
 gi|226736766|sp|B5XNM2|EX7L_KLEP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|206568409|gb|ACI10185.1| exodeoxyribonuclease VII, large subunit [Klebsiella pneumoniae 342]
          Length = 463

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/513 (28%), Positives = 234/513 (45%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  + R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLDHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+     +   + Q + + T   
Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVNDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   +K      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461


>gi|254511401|ref|ZP_05123468.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221535112|gb|EEE38100.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 495

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 182/531 (34%), Positives = 268/531 (50%), Gaps = 38/531 (7%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PEYSVS++S  +K  +E     + VRGE+ G      SGH Y+ +K
Sbjct: 1   MSDLLDDPVPGQNTPEYSVSDISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + +    WKG ++ +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+ 
Sbjct: 60  DDRNVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKK+L  EGLF+ + K P+P++P+II VITSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 120 LLEKRKKQLESEGLFAPERKKPLPYLPQIIGVITSPSGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+  AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E + RA A 
Sbjct: 180 VAVQGANCAPEVTRAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEENVARAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S+IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+  L +      ARL+     
Sbjct: 240 SAIPLISAVGHETDTTLIDYVSDRRAPTPTAAAELAVPVRMELLAWTREQGARLSRAATD 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  L +ALP  +  L   R RLD+    L + L   +  +          ++
Sbjct: 300 AVQRRSQRLRDLARALPRPETLLDSPRQRLDQAAERLPNALIRGVQTRRVKLLDSAAHLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L + +   R         +                             +  +     
Sbjct: 360 PSTLRNLVATRRDRWHNLSSRLS------------------------LRPIQRELTTRRD 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + +L  R+      ++   H  +  T R+ ++ +YK TL+RGY  I+   ++ +T+K  
Sbjct: 396 TLNRLTERLNTAQITRLDRLHQQLDATDRLRETLSYKATLERGYAVIR-AGDHVLTRKAQ 454

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               T   I F DG  N                 +     +     QG LF
Sbjct: 455 AEKHTTFEIEFADGTLNT----------GQGGGAKPKRTPKPPAPDQGSLF 495


>gi|126740019|ref|ZP_01755709.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. SK209-2-6]
 gi|126718838|gb|EBA15550.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. SK209-2-6]
          Length = 544

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 179/545 (32%), Positives = 275/545 (50%), Gaps = 42/545 (7%)

Query: 1   MNPFSQ--KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+      +   + PE+SVSE+S  +K  +E     + V+GE+ G      SGH Y+ +K
Sbjct: 26  MSDLFDDPQPGQNTPEFSVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIK 84

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +    WKG ++ +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+ 
Sbjct: 85  DDRSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 144

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++P
Sbjct: 145 LLEKRKKQLEAEGLFAMERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWP 204

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+A AI   N L  G   PRPD+II+ARGGG+IEDLW FN+E++ RA A 
Sbjct: 205 VAVQGQNCAPEVARAIEGFNRLTPGGALPRPDLIIVARGGGAIEDLWGFNEEIVARAAAA 264

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+ +DLRAPTPT AAE AVPV+  L +      ARL   + +
Sbjct: 265 SEIPLISAVGHETDTTLIDFVSDLRAPTPTAAAEHAVPVRLELMAWSEAQGARLTRGVSQ 324

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   LN L +A+P  +  L   R RLDR+   L   L   + ++    +     ++
Sbjct: 325 AVQQRRQRLNDLSRAIPRPETLLETPRQRLDRVSETLPRALMAGVQKRQVTLSRAAAALR 384

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   +   +  +      +                                +     
Sbjct: 385 PATLRQLVSSRQDRLRNLSSRLS------------------------PRPLDQEVDRQKE 420

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + +L  R++     +++    S++   R L+  +YK TL RGY  ++   +  IT    
Sbjct: 421 QLSRLGIRLKSAQDLRLERMQRSLATAGRQLEILSYKATLDRGYAVVRSGAD-LITSSVE 479

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ--------------LHNNKREKQGT 524
                 + I F DG+       +A  +     + +                    +  G 
Sbjct: 480 AQNAGPLTIEFADGEFRLENTEEAATEAASGPQQKSASSKQVTSKPVKQTKAKPEKPDGE 539

Query: 525 QGELF 529
           QG LF
Sbjct: 540 QGSLF 544


>gi|262040241|ref|ZP_06013492.1| exodeoxyribonuclease 7 large subunit [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042350|gb|EEW43370.1| exodeoxyribonuclease 7 large subunit [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 463

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFHPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   +E  + R  +     + R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    ++   + Q + + T   
Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +     DG   + V   AP K+   ++      
Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARRPSPTKP 461


>gi|307250047|ref|ZP_07532011.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857907|gb|EFM89999.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 517

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQIQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVKQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|294013432|ref|YP_003546892.1| exodeoxyribonuclease VII large subunit [Sphingobium japonicum
           UT26S]
 gi|292676762|dbj|BAI98280.1| exodeoxyribonuclease VII large subunit [Sphingobium japonicum
           UT26S]
          Length = 499

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 181/531 (34%), Positives = 270/531 (50%), Gaps = 55/531 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             +++  + P  SVSELS  LK  VE    HV +RGEISG++    SGH Y  LKD+++ 
Sbjct: 17  AEERSGDNAPPLSVSELSALLKRTVEDRFGHVRLRGEISGFK-RAGSGHIYLCLKDDNAV 75

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKG   ++ F P++G+E +  GK+TT+PG SKYQI+I+ +  +G G L+  LEK 
Sbjct: 76  IDGVMWKGGAARLPFAPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKL 135

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K+KL  EGLF    K  +PF+P++I V+TSPTGAVIRDIL R+  R P +V+++PV VQG
Sbjct: 136 KQKLAAEGLFDRSAKRRLPFMPRVIGVVTSPTGAVIRDILHRLEDRCPTQVLLWPVLVQG 195

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               +++A A+   + ++ G   PRPD++I+ARGGGSIEDLW FN+E++VRA+A SSIPI
Sbjct: 196 QGAAEQVARAVRGFSAMQPGGPIPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAESSIPI 255

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAAD+RAPTPT AAEMAVPV+  L + L     R++  + R     
Sbjct: 256 ISAVGHETDTTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLTEQGLRMDRAVRRGAAQA 315

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L+   + +P  D  L+  R RLD+L   L   L   I     H       ++   L 
Sbjct: 316 RERLDMQARLMPTPDTLLAPQRQRLDQLSDGLASALRHRIADARTHLGQAGGALRPALLR 375

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + +  + +   Q   + + + +                                    
Sbjct: 376 QYVNRAAERVARLQLRPDYLERVYRDRATA------------------------------ 405

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                                 +R+  S      L+RG+  +    +  +    +     
Sbjct: 406 ------------------FDRVSRLFTSVNPDLPLQRGFARVM-AGDRLVKSVADAKAAG 446

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ-----GTQGELF 529
            + ++F DG   A +    P ++ P +     +    K        Q +LF
Sbjct: 447 AVSLHFRDGAVGATIEGGTPLEKPPAQAISNPSRPPRKPREGEEAGQPDLF 497


>gi|260598893|ref|YP_003211464.1| exodeoxyribonuclease VII large subunit [Cronobacter turicensis
           z3032]
 gi|260218070|emb|CBA32811.1| Exodeoxyribonuclease 7 large subunit [Cronobacter turicensis z3032]
          Length = 457

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 143/512 (27%), Positives = 235/512 (45%), Gaps = 61/512 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +
Sbjct: 2   PLTPTPS----IFTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTA 56

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++   +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+
Sbjct: 57  QVRCAMFRNSNRRVTFRPQHGQQVLVRATITLYEPRGDYQIIVESMQPAGEGLLQQRYEQ 116

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K++L  EGLF    K P+P   + + VITS TGA + D+L  +  R P L V+I+P  V
Sbjct: 117 LKQQLAAEGLFDPALKKPLPSPARQVGVITSKTGAALHDVLNVLRRRDPSLPVVIYPTAV 176

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD+ P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S I
Sbjct: 177 QGDDAPAQIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRI 230

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PI+SA+GHETD T+AD+ ADLRAPTP+ AAEM    +  L   +  L+ RL   +   + 
Sbjct: 231 PIVSAVGHETDVTIADFVADLRAPTPSAAAEMVSRNQLELLRQVQGLQQRLEMAMDYSLA 290

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +      L   L      L  +R +    RL + +++ L+  + +  +    +  R+  
Sbjct: 291 NRQQRFTRLHHRLEQQHPQLRLARQQTLLMRLRQRMDNALDSRMRQATQRQTRLTQRLNQ 350

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              +  + +    I + +  + Q+                                    
Sbjct: 351 QQPLPRLHRASARIQQLEYRLAQL------------------------------------ 374

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                      ++ ++             L++ +   TL RGY+     + N +   + +
Sbjct: 375 -----------VTARLSHTRERFGNAITHLEAVSPLATLARGYSVTTAQDGNVLKATKQV 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
                +     DG   + V    P K+   KK
Sbjct: 424 QPGDTLTTRLADGWVESEVRQITPAKKTRKKK 455


>gi|254490067|ref|ZP_05103260.1| exodeoxyribonuclease VII, large subunit [Methylophaga thiooxidans
           DMS010]
 gi|224464731|gb|EEF80987.1| exodeoxyribonuclease VII, large subunit [Methylophaga thiooxydans
           DMS010]
          Length = 485

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 144/493 (29%), Positives = 256/493 (51%), Gaps = 13/493 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y VS L    + ++E +   + V GEIS    + +SGH YF+LKD  +++   +++   
Sbjct: 4   VYPVSRLVREARVLLEGSFPLLWVEGEISNL-AMPASGHIYFTLKDEAAQVRCAMFRNRN 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ L+  ++T + G  ++Q+++E +  +GSG L  A E  K++L +EGLF
Sbjct: 63  RQLRFTPENGMQVLLRVRVTLYEGRGEFQLVVEHMEEAGSGALQRAYEALKQRLGQEGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D HK PIP +P  I +I+SP GA + DI+  +  RFP   VI++PV VQG+   +++ +
Sbjct: 123 DDAHKKPIPALPHTIGIISSPDGAAVHDIVSVLKRRFPAAAVILYPVAVQGEAAARQLVD 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+   +  K+       D++I+ RGGGS+EDLW FNDE + RA+ N  +P+ISA+GHE D
Sbjct: 183 AVKLADHRKD------CDVLIIGRGGGSLEDLWSFNDEQLARALFNCELPVISAVGHEID 236

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD+RAPTP+ AAE+AVP  + L + +  L  RL  +  + +  +   L  L +
Sbjct: 237 FTIADFVADVRAPTPSAAAEIAVPDAKQLLAKIQGLTQRLTVMTKQWLVSEQRHLQHLQR 296

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            LP  D  L+  R  L++  + L    + I+    +  +++  R+K       I K +  
Sbjct: 297 RLPRPDVQLNQQRQVLNQQTKLLGSAWQRILMSSQQKLDYLSARLK--HPQAQIDKQQSK 354

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   Q  + Q  +   ++           LH  R+   + +   H  +  +  +++ ++ 
Sbjct: 355 LAALQHRLGQAFRAEFKHSETALLSLQQRLH--RQLPTHAVIRHHEALSLVRKQLDRLML 412

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFD 491
            ++ +   ++    R L + +  NTL+RGY+          +T    +     I +    
Sbjct: 413 MQLDTAKQALKQQVRTLAAVSPLNTLERGYSITTRQQTAEVLTHAETVEKGEMIEVRLLQ 472

Query: 492 GQANAIVINKAPP 504
           G     V + +  
Sbjct: 473 GHLACEVKSVSKK 485


>gi|254466447|ref|ZP_05079858.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium
           Y4I]
 gi|206687355|gb|EDZ47837.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium
           Y4I]
          Length = 502

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 186/528 (35%), Positives = 279/528 (52%), Gaps = 34/528 (6%)

Query: 2   NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           +P    +   + PE++VSE+S  +K  +E     + VRGE+ G      SGH Y+ +KD+
Sbjct: 7   DPIPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIKDD 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S +    WKG ++ +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+  L
Sbjct: 66  RSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMALL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++PV 
Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N L  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A S 
Sbjct: 186 VQGQNCAPEVARAIDGFNRLTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAASQ 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L +      ARL     + +
Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELMAWTETQGARLTRAAGQAV 305

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   LN L +ALP  D  L   R RLDR+   L   L   + R+  H +     ++  
Sbjct: 306 QLRRQRLNDLARALPKPDTLLETPRQRLDRISDRLPGALISGVQRRRVHLSETAASLRPA 365

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   ++  R  +      +                             +  +      +
Sbjct: 366 TLRQLVEGRRNRLQNLSSRLS------------------------LRPIQREMAAQKDAL 401

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +L  R++   + +I     +++ T R L+  +YK TL+RGY  ++  +   +T +   A
Sbjct: 402 GRLAQRLDAAQAVRIDRQRQALTATGRQLEILSYKATLERGYAVVRSGD-EILTTRAAAA 460

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
               + I F DG  +   +         T+      N   K G QG L
Sbjct: 461 KAGALQIEFADGTLD---LGGGAADAPKTEGP----NPLAKGGGQGTL 501


>gi|42521827|ref|NP_967207.1| exodeoxyribonuclease VII, large subunit [Bdellovibrio bacteriovorus
           HD100]
 gi|39574357|emb|CAE77861.1| exodeoxyribonuclease VII, large subunit [Bdellovibrio bacteriovorus
           HD100]
          Length = 468

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 149/494 (30%), Positives = 238/494 (48%), Gaps = 59/494 (11%)

Query: 11  DHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           + P   SV +L+ ++K ++E  +  V V+GEIS ++  H+SGH YFSLKD+ S+I A+++
Sbjct: 30  NEPSVLSVEQLNIYVKQLLEGQIGQVWVKGEISNFKA-HTSGHFYFSLKDSRSQITAVMF 88

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   +++F P +G+E +V G+IT +     YQ++ E + P G+G L  A E+ K KL  
Sbjct: 89  RGNNARLKFKPTDGMEVIVRGRITVYEPRGNYQLMCEMMEPVGAGALQKAFEQLKMKLKA 148

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EGLF    K PIP  P+ IA++TSPTGA IRDIL  +S R   ++V + P  VQG+    
Sbjct: 149 EGLFESARKKPIPTFPRHIAIVTSPTGAAIRDILNVLSRRAKAIQVTVVPTIVQGEAAAP 208

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I  A  +   L      P  D++I+ RGGGSIED+W FNDE + R IA S +P+ISA+G
Sbjct: 209 QICEAFKKATAL------PGVDVVIVGRGGGSIEDMWCFNDERLARLIAASPVPVISAVG 262

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+T+AD+ ADLRAPTP+ AAE+       L + +++LE  L+    + +K+    + 
Sbjct: 263 HEIDFTIADFVADLRAPTPSAAAELVAKSSGELANKVVSLERMLHLTFEKKMKFLREKML 322

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L K L +  + L     R D L   LE  +   +  +      +  ++        I +
Sbjct: 323 GLSKRLVDPKRRLQDLELRNDDLLNRLEFAINRRLAERRHRVELMSQKLG--SPQDLIDE 380

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +   +   E+ +                                            
Sbjct: 381 KKKDLEYLKARSEKALHFS----------------------------------------- 399

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 I+     +     +L S +    ++RGY+ +   N+  I     +     + I 
Sbjct: 400 ------IERKKARMGKVMAMLDSLSPLKVVERGYSIVT-KNSEVIKSASQVKKGDLLDIR 452

Query: 489 FFDGQANAIVINKA 502
              G   AIV    
Sbjct: 453 LAQGSVTAIVDGVK 466


>gi|296104183|ref|YP_003614329.1| exodeoxyribonuclease VII large subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058642|gb|ADF63380.1| exodeoxyribonuclease VII large subunit [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 457

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 57/509 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     Y+VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQSPSIYTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K  L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAAL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 SQEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S+IPI+SA
Sbjct: 182 PGQIVRAIELANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASAIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + N + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQIQNCQQRLEMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   L+  + R       +  R+       
Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTVLERLRQRMNFALDNQLKRAMSRQQRVTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIYRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + Q + +     
Sbjct: 374 -----TVRARLSTTRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKAGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           +     DG   + V      K+   +K  
Sbjct: 429 LTTRLSDGWVESEVKGVMSVKKPRARKKA 457


>gi|307256866|ref|ZP_07538644.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864600|gb|EFM96505.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 517

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL    +I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGMQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|54307974|ref|YP_128994.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum
           SS9]
 gi|81828837|sp|Q6LU33|EX7L_PHOPR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|46912400|emb|CAG19192.1| putative exodeoxyribonuclease VII, large subunit [Photobacterium
           profundum SS9]
          Length = 448

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 142/503 (28%), Positives = 240/503 (47%), Gaps = 58/503 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F+Q  S D   ++VS L+  ++ ++E+ +  V + GE+S    +  SGH YF+LKD+
Sbjct: 1   MTLFTQTQSNDR-IFTVSSLNAEVRLLLENEMGIVWLVGELSNL-SMPVSGHWYFTLKDS 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 59  RAQVKCAMFRGNNRRVTFKPANGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K P+P  PK I +ITS TGA + DIL  +  R P L V+I+P 
Sbjct: 119 EQLKMSLAAEGLFAQALKKPLPEQPKRIGIITSKTGAALHDILTVLHRRDPSLPVVIYPT 178

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD     IA AI + N  +E       D++I+ RGGGS+EDLW FN+E++ R IA S
Sbjct: 179 MVQGDGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H    +     +L N I   
Sbjct: 233 QIPIVSAVGHEVDVTIADFVADMRAPTPSAAAELVSRDITHQTQKIQQKNQQLKNAIRTY 292

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +      L   L   +    L+  +  LD +   LE  +  ++   ++H   I  ++
Sbjct: 293 LSKREAKTVQLTHRLERQHPQLRLNQQQQHLDDISSRLERAMGRLLSSHHQHVERINYKL 352

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +  I+ N+  + ++++ +                                     
Sbjct: 353 SLHSPVQTIKNNQTTLDQRKRRLL------------------------------------ 376

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        + H++ + +  +++    L++ +   TL RGY+  +D     I    
Sbjct: 377 -----------DAMDHRLLNANHKLALAAEKLETVSPLATLSRGYSITRDAKGKVIRHID 425

Query: 478 NLATKTRILINFFDGQANAIVIN 500
            +    +++    DG+ ++ V  
Sbjct: 426 QVKPGDKLVTKVTDGEIHSTVSE 448


>gi|90410882|ref|ZP_01218896.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum
           3TCK]
 gi|90328095|gb|EAS44406.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum
           3TCK]
          Length = 448

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 141/503 (28%), Positives = 240/503 (47%), Gaps = 58/503 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F+Q  S D   ++VS L+  ++ ++E+ +  V + GE+S    +  SGH YF+LKD+
Sbjct: 1   MTLFTQTQSNDR-IFTVSSLNAEVRLLLENEMGIVWLVGELSNL-SMPVSGHWYFTLKDS 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 59  RAQVKCAMFRGNNRRVTFKPANGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K P+P  PK + +ITS TGA + DIL  +  R P L V+I+P 
Sbjct: 119 EQLKMSLAAEGLFAQVLKKPLPEQPKRVGIITSKTGAALHDILNVLHRRDPSLPVVIYPT 178

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD     IA AI + N  +E       D++I+ RGGGS+EDLW FN+E++ R IA S
Sbjct: 179 MVQGDGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H    +     +L N I   
Sbjct: 233 QIPIVSAVGHEVDVTIADFVADMRAPTPSAAAELVSRDITHQTQKIQQKNQQLKNAIHTY 292

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +      L   L   +    L+  +  LD +   LE  +  ++   ++H   I  ++
Sbjct: 293 LSKREAKTVQLTHRLERQHPQLRLNQQQQHLDDISSRLELAMGRLLSSHHQHVERINYKL 352

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +  I+ N+  + ++++ +                                     
Sbjct: 353 SLHSPVQTIKNNQTTLDQRKRRLL------------------------------------ 376

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        + H++ + +  +++    L++ +   TL RGY+  +D     I    
Sbjct: 377 -----------DAMDHRLLNANHKLALAAEKLETVSPLATLSRGYSITRDAKGKVIRHID 425

Query: 478 NLATKTRILINFFDGQANAIVIN 500
            +    +++    DG+ ++ V  
Sbjct: 426 QVKPGDKLVTKVTDGEIHSTVSE 448


>gi|190150143|ref|YP_001968668.1| exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307263480|ref|ZP_07545095.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915274|gb|ACE61526.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871123|gb|EFN02852.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 517

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLR PTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVAQTSKGEILRSTENLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|149202158|ref|ZP_01879131.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. TM1035]
 gi|149144256|gb|EDM32287.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. TM1035]
          Length = 495

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 190/531 (35%), Positives = 284/531 (53%), Gaps = 38/531 (7%)

Query: 1   MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE+SVS+LS  +K ++E   SHV VRGE+ G      SGH Y  LK
Sbjct: 1   MSDLIDDPQEGGNAPEFSVSDLSGAIKRMIEGEFSHVRVRGEL-GRISRPRSGHIYLDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + +  IIWKG   ++   PEEG+E +  G++TTFPG S+YQIIIE + P+G G L+ 
Sbjct: 60  DDSAVLAGIIWKGVATRLAVQPEEGMEVVATGRLTTFPGQSRYQIIIEDMKPAGMGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK  L  EGLF+ + K  +P++P+II V+TSP+GAVIRDIL R+  RFP +V+I+P
Sbjct: 120 MLEKRKAALAAEGLFASERKQALPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQGD+C  E+A AI   N +  G   PRPD+II+ARGGGS+EDLW FN+E++VRA A 
Sbjct: 180 VAVQGDKCAAEVARAIRGFNAMTPGGALPRPDLIIVARGGGSVEDLWGFNEEIVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S+IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+  L + +    ARL++ + +
Sbjct: 240 SAIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRMDLLAWVEGQGARLSHALSQ 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L  L +ALP ++  L   R RLD L   L   L   +  +  H +     ++
Sbjct: 300 GVRLRGQRLRDLARALPRAEVLLDGPRQRLDALGERLPAALIRSVQVRRVHLSETAGALR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   ++ +R+ +      +                                I     
Sbjct: 360 PALLRRAVEGDRRRLQATAARL------------------------NVHALNRDIAQKRR 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            + ++  R+  +   +++     ++   R+ ++  YK TL RGY  ++  +   +T +  
Sbjct: 396 DLDQVSARLSDVAGRQVRGWQDRLAALERLRETLGYKATLSRGYAVVRG-DGAVMTTRAA 454

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            A    + I F DG  +             +         +     QG LF
Sbjct: 455 AAGAAALQIEFADGVLDV----------SGSSAAAPKPKPKTPPAGQGSLF 495


>gi|307245679|ref|ZP_07527765.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254646|ref|ZP_07536475.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259093|ref|ZP_07540823.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853381|gb|EFM85600.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862391|gb|EFM94356.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866760|gb|EFM98618.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 517

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  +G
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAQG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|307261299|ref|ZP_07542974.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869030|gb|EFN00832.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 517

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  +G
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAQG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|300717943|ref|YP_003742746.1| exodeoxyribonuclease VII large subunit [Erwinia billingiae Eb661]
 gi|299063779|emb|CAX60899.1| Exodeoxyribonuclease VII large subunit [Erwinia billingiae Eb661]
          Length = 459

 Score =  385 bits (989), Expect = e-104,   Method: Composition-based stats.
 Identities = 148/514 (28%), Positives = 237/514 (46%), Gaps = 59/514 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S   S +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSLPPSAN--IFTVSRLNTTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDGAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++ +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ 
Sbjct: 58  VRCAMFRNSNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGEGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+KL+ EGLF   HK P+P   + + VITS TGA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQKLMSEGLFEQSHKQPLPDPARQVGVITSSTGAALHDVLRVLHRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G + P  I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP
Sbjct: 178 GVDAPASIVRAIETANARAE------CDVLIVGRGGGSLEDLWSFNDERVARAIYASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELLRQLQSQQTRLEMAMDYYLAQ 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           K  T   +   L      L  +R +    RL R L+  +++ + +  R       R+ + 
Sbjct: 292 KSRTFTRIQHRLQQQHPQLRLARQQTALMRLQRRLDDAMQLRVRQAGRQQERAKQRLSAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I + +Q++ + Q  ++Q                                      
Sbjct: 352 QPQARIHRAQQNLQQWQYRLQQA------------------------------------- 374

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                     +  ++       S  T  L+  +   TL RG++     +   + + R + 
Sbjct: 375 ----------MQQQLNGGKQRFSTLTAQLEGVSPLATLARGFSVTTAQDGQVVKKTRQVQ 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           T   +     DG   + V    P K+    K   
Sbjct: 425 TGDTLKTRLDDGWVESEVTAVTPTKKPRKPKNPA 458


>gi|126208293|ref|YP_001053518.1| exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae L20]
 gi|126097085|gb|ABN73913.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 486

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 2   NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 61  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 473 LSQGEIVSEIIKIN 486


>gi|311278570|ref|YP_003940801.1| exodeoxyribonuclease VII, large subunit [Enterobacter cloacae SCF1]
 gi|308747765|gb|ADO47517.1| exodeoxyribonuclease VII, large subunit [Enterobacter cloacae SCF1]
          Length = 457

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/508 (28%), Positives = 234/508 (46%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+++++   
Sbjct: 3   PSQSPSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K +L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  Q K P+P   + + VITS TGA + DIL  +  R P L +II+P  VQGD+ 
Sbjct: 122 SQEGLFDQQCKQPLPSPARCVGVITSKTGAALHDILHVLKRRDPSLPIIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L N + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQLQNGQQRLEMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   L+  + R  +    I  R+       
Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTVLERLRQRMSFALDNQLRRAGQRQQRITQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLVE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+     + N + Q + +     
Sbjct: 374 -----NARARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTAMDGNVLKQTKQVKAGDL 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V      K+   KK 
Sbjct: 429 LTTRLSDGWVESEVKGVTTAKKTRRKKP 456


>gi|156932950|ref|YP_001436866.1| exodeoxyribonuclease VII large subunit [Cronobacter sakazakii ATCC
           BAA-894]
 gi|166232355|sp|A7MGV1|EX7L_ENTS8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|156531204|gb|ABU76030.1| hypothetical protein ESA_00753 [Cronobacter sakazakii ATCC BAA-894]
          Length = 457

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/512 (27%), Positives = 236/512 (46%), Gaps = 61/512 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +Q  S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +
Sbjct: 2   PLTQTPS----IFTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTA 56

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++   +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+
Sbjct: 57  QVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQRYEQ 116

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K++L  EGLF    K P+P   + + VITS TGA + D+L  +  R P L V+I+P  V
Sbjct: 117 LKQQLAAEGLFDPALKKPLPSPARQVGVITSKTGAALHDVLNVLRRRDPSLPVVIYPTAV 176

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD+ P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S I
Sbjct: 177 QGDDAPAQIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRI 230

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PI+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +  L+ RL   +   + 
Sbjct: 231 PIVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQVQALQQRLEMAMDYSLA 290

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +      L   L      L  +R +    RL + +++ L+  +    +    ++ R+  
Sbjct: 291 NRQQRFTRLHHRLEQQHPQLRLARQQTLLMRLRQRMDNALDSRMRHATQRQTRLMQRLNQ 350

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              +  + +    + + +  + QI                                    
Sbjct: 351 QQPLPRLHRASARVQQLEYRLGQI------------------------------------ 374

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                      ++ ++             L++ +   TL RGY+     + N +   + +
Sbjct: 375 -----------VAARLSHTRERFGNAITHLEAVSPLATLARGYSVTTAQDGNVLKATKQV 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
                +     DG   + V    P K+   KK
Sbjct: 424 RPGDTLTTRLADGWVESEVRQITPAKKTRKKK 455


>gi|52424615|ref|YP_087752.1| exodeoxyribonuclease VII large subunit [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306667|gb|AAU37167.1| XseA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 440

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 149/493 (30%), Positives = 234/493 (47%), Gaps = 57/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           ++   YSVS+L+Y ++ ++E  L  V + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 2   MNENIYSVSQLNYSVRQLLEGQLGLVWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E  K KL  
Sbjct: 61  RMKNMRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIESMHPAGEGFLQQQFEALKIKLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + ++TSPTGA ++DIL  +  R P L++II+P  VQG +   
Sbjct: 121 EGLFAQNLKKNLPHFAKTVGIVTSPTGAALQDILNILQRRDPSLKIIIYPTAVQGKDAAN 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N   E       D++I+ RGGGS+EDLW FN+E + RAI  SSIP+ISA+G
Sbjct: 181 EIVQMIELANLRNEA------DVLIVGRGGGSLEDLWCFNEETVARAIFRSSIPVISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ AD+RAPTP+ AAE+    ++ L   L     RL   + RL   K   L 
Sbjct: 235 HETDVTIADFVADVRAPTPSAAAELVSRNQQELFQQLQYKRQRLEMALDRLFNEKQQHLQ 294

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
             L  L   +    L   R +  +L   L   +  ++ + +     +  R++ + L + +
Sbjct: 295 RFLLRLQNRHPSARLLAQRQQTGQLEHRLNSAIRRLLDKNHYKLTALCERLEKNPLPYLV 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++   HI++                                                 T 
Sbjct: 355 RQQNYHIVQLA-----------------------------------------------TN 367

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++F L   I S  TS+S     L   +    L RGY+  +      I+    + T  +I 
Sbjct: 368 LDFALKRLIVSKQTSLSALCGKLDGLSPLKVLARGYSIAETEQGETISSVNQVETGDKIK 427

Query: 487 INFFDGQANAIVI 499
               DG   + VI
Sbjct: 428 TRLRDGVIVSKVI 440


>gi|300920664|ref|ZP_07137075.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 115-1]
 gi|300412345|gb|EFJ95655.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 115-1]
          Length = 456

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIYHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|157144558|ref|YP_001451877.1| exodeoxyribonuclease VII large subunit [Citrobacter koseri ATCC
           BAA-895]
 gi|166232350|sp|A8AD78|EX7L_CITK8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157081763|gb|ABV11441.1| hypothetical protein CKO_00278 [Citrobacter koseri ATCC BAA-895]
          Length = 457

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/507 (28%), Positives = 234/507 (46%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSTIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQIIIES+ P+G G L    E  K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIIESMQPAGEGLLQQKYELLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI + N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIERANARNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRNRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   L+  + R       ++ R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTMLERLRQRMNFALDNQLKRAASRQQRVLQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIYRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + Q R +     
Sbjct: 374 -----NVRARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTRQVKAGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      K+   KK
Sbjct: 429 LTTRLSDGWVESEVKGVTTAKKTRRKK 455


>gi|332754196|gb|EGJ84564.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 4343-70]
          Length = 456

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 148/506 (29%), Positives = 236/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + + T   
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|161502331|ref|YP_001569443.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189037843|sp|A9MHM3|EX7L_SALAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|160863678|gb|ABX20301.1| hypothetical protein SARI_00364 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 454

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/502 (28%), Positives = 234/502 (46%), Gaps = 57/502 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K+P+P     + VITS TGA + DIL  +  R P L VII+P  VQG++ 
Sbjct: 122 QAEGLFDQQYKHPLPSPAYCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGEDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N  KE       D++I+ RGGGS+EDLW FNDE + RAI  S+IP++SA
Sbjct: 182 PGQIVRAITLANARKE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASTIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   +     RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQTACQRLEMAMDYYLANRQRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            + L   L      L  +R +   +RL + +   LE  + +  +       R++      
Sbjct: 296 FSQLYHRLQQQHPQLRLARQQTTLERLRQRMHLALENQLKQANQRQQRASQRLRQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++         T   L++ +   TL RGY+    T+ N + + + L     
Sbjct: 374 -----NFRARLSEQRERFGNTVTHLEAVSPLATLARGYSVSTATDGNVLKKVKQLKVGDM 428

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           +     DG   + V    P K+
Sbjct: 429 MTTRLKDGWVTSEVTAIKPVKK 450


>gi|302382957|ref|YP_003818780.1| exodeoxyribonuclease VII large subunit [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193585|gb|ADL01157.1| exodeoxyribonuclease VII, large subunit [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 529

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 184/526 (34%), Positives = 274/526 (52%), Gaps = 12/526 (2%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
                 ++P  S+SELS+ LK  +E    HV +RGEIS     H+SGH Y +LKD+ S I
Sbjct: 15  PAPARDNNPPLSISELSFALKRTLEDRFGHVRLRGEISKVN-RHASGHIYLTLKDDKSAI 73

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           D ++WKG+   +   PE G+E +V GKIT++P  S YQI+IES+  +G+G LL  LE+ K
Sbjct: 74  DGVVWKGSARGLGVQPETGLEVIVTGKITSYPARSSYQIVIESMEAAGAGALLAQLERLK 133

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
            +L  EGLF    K  IP  P+ I VITSPTGAVIRDIL RI+ R+P  VI++PV VQGD
Sbjct: 134 VRLSGEGLFDPARKRSIPLYPRTIGVITSPTGAVIRDILHRIAERWPCHVIVWPVVVQGD 193

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  AI   + +  G   PRPD++I+ARGGGS+EDLW FNDE + R +A ++IPII
Sbjct: 194 AACGQVGAAIRGFDAMTPGGPIPRPDLLIVARGGGSVEDLWCFNDEGLARTVAAATIPII 253

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD TL D+ +D RAPTPTGAAE+A PV   L++++ +LE RL+    RL++ + 
Sbjct: 254 SAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRAAVTDLERRLDRAGARLLEDRR 313

Query: 305 NTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             L ++ + LP   +  ++ ++ RLD     L   L   +   +R    +  R     L 
Sbjct: 314 VRLRAVARGLPARPEDLIALAQQRLDHAASRLGSGLGRNVELHHRRLVGVAGRFSPRLLD 373

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +++    +      +   +         E++       +     ++R+      +   
Sbjct: 374 RAVEQRTARLDGLGSRLVAAL--GANAARHERRLLQVSGRLTPAPLRHRLEQRSDRLTAT 431

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
           + R++      I      ++   R L +   +   K G+  I D     I     L+   
Sbjct: 432 VARLDRARPQAILRASDRLAALARALATLDPRRP-KPGFARIDDETGKMIASAAALSPGQ 490

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           R+ +NF DG   A +         P    +     R     QG LF
Sbjct: 491 RVSLNFADGSQGATIDG-------PASAPRPPGKPRTAPVDQGSLF 529


>gi|157161984|ref|YP_001459302.1| exodeoxyribonuclease VII large subunit [Escherichia coli HS]
 gi|170019208|ref|YP_001724162.1| exodeoxyribonuclease VII large subunit [Escherichia coli ATCC 8739]
 gi|312973250|ref|ZP_07787422.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1827-70]
 gi|166919632|sp|A8A315|EX7L_ECOHS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|189037847|sp|B1IWF2|EX7L_ECOLC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157067664|gb|ABV06919.1| exodeoxyribonuclease VII, large subunit [Escherichia coli HS]
 gi|169754136|gb|ACA76835.1| exodeoxyribonuclease VII, large subunit [Escherichia coli ATCC
           8739]
 gi|310331845|gb|EFP99080.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1827-70]
 gi|323941229|gb|EGB37414.1| exodeoxyribonuclease VII [Escherichia coli E482]
          Length = 456

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLKKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|254473566|ref|ZP_05086962.1| exodeoxyribonuclease VII, large subunit [Pseudovibrio sp. JE062]
 gi|211957278|gb|EEA92482.1| exodeoxyribonuclease VII, large subunit [Pseudovibrio sp. JE062]
          Length = 510

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/554 (34%), Positives = 284/554 (51%), Gaps = 82/554 (14%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +  EY+VSE+S  +K  +E    ++ VRGE+ G     +SGH Y  +KD+ + +  IIW
Sbjct: 5   SNIAEYTVSEISGDIKRELEDKFGYIRVRGEL-GRVSRPASGHIYLDVKDDKAVLSGIIW 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G  ++++  PE+G+E +  GKITTFPG SKYQ++I+SL P+G+G L+  LE+RK+KL  
Sbjct: 64  RGNASRLKVQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKRKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189
           EGLF+++ K  +P +P++I V+TSPTGAVIRDIL RIS RFPL V+++PV+VQG+ C  E
Sbjct: 124 EGLFAEERKVALPRMPRVIGVVTSPTGAVIRDILHRISDRFPLHVLVWPVRVQGETCGSE 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A  I   N L+ G   PRPD++I+ARGGGSIEDLW FNDE +VRA A+S IP+ISA+GH
Sbjct: 184 VAAGIRGFNALEAGGAIPRPDVLIVARGGGSIEDLWGFNDEAVVRAAADSQIPLISAVGH 243

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETDWTL D AAD+RAPTPTGAAE AVPVK  + + + +L  RL+  ++RL++ +   L +
Sbjct: 244 ETDWTLIDLAADVRAPTPTGAAEFAVPVKAEMTAQVDDLSRRLSTGLLRLVQSRRTELRA 303

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
              ALP     L+  R R D +   LEH L++           + + ++   L   + + 
Sbjct: 304 ASAALPAPRDLLALPRQRFDMVAGRLEHGLKMNTQIHRNSLTAVSSGLRPITLERQVAQG 363

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R+ +   +          ++                                        
Sbjct: 364 RERLQVLKVRATTAFSNQVQRQ-------------------------------------- 385

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                       +S +  +L S +Y+  ++RGY  ++D N   +   + +     + +  
Sbjct: 386 ---------RLRLSNSAGLLGSLSYERVIERGYAVVRDENGIPLASAQAVQAGQALKLEM 436

Query: 490 FDGQANAIVINK------------------------APPKE----------QPTKKCQLH 515
             G   A+                            +PPK           +  KK    
Sbjct: 437 KGGTVGAVADGGGVTPTPPRVAIPTPTEAAEPSAPTSPPKSLEEHMAQTKAKQAKKPARK 496

Query: 516 NNKREKQGTQGELF 529
                    QG LF
Sbjct: 497 KKSVVDPDAQGSLF 510


>gi|94496131|ref|ZP_01302709.1| exodeoxyribonuclease VII large subunit [Sphingomonas sp. SKA58]
 gi|94424310|gb|EAT09333.1| exodeoxyribonuclease VII large subunit [Sphingomonas sp. SKA58]
          Length = 493

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/527 (34%), Positives = 269/527 (51%), Gaps = 51/527 (9%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
              +   + P  SVSELS  LK  VE    HV +RGEISG++   +SGH Y  LKD+++ 
Sbjct: 16  AEDRAGDNAPPLSVSELSGMLKRTVEDRFGHVRLRGEISGFK-RAASGHLYLCLKDDNAV 74

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKG   ++ F P++G+E +  GK+TT+PG SKYQI+IE +  +G G L+  LEK 
Sbjct: 75  IDGVMWKGGAQRLAFAPQDGVEVIATGKLTTYPGRSKYQIVIERMELAGEGALMALLEKL 134

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K KL  EGLF+ + K P+PF+P+ I V+TSPTGAVIRDIL R++ R P +V+++PV VQG
Sbjct: 135 KAKLAGEGLFAPERKKPLPFLPRTIGVVTSPTGAVIRDILHRLADRCPTQVLLWPVLVQG 194

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               +++A A+   + +      PRP+++I+ARGGGSIEDLW FN+E++VRA+A  SIPI
Sbjct: 195 QGAAEQVARAVRGFSEMAGDGALPRPELVIVARGGGSIEDLWSFNEEIVVRAVAECSIPI 254

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+  L + L ++  R    + R     
Sbjct: 255 ISAVGHETDTTLCDYAADRRAPTPTAAAEMAVPVRAELLAGLTDMGLRAGRAVRRGAAQA 314

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L+   + +P  D  LS  R RLD++   L   L   +     H       ++   L 
Sbjct: 315 RERLDMQARLMPTPDTLLSPQRQRLDQVSDGLASGLRHRLADARAHLGQASGALRPALLR 374

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + +  + +   +   E +V                                       
Sbjct: 375 QQLARAGERLDRLRLRPENLV--------------------------------------- 395

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R +   +          +              L+RGY  +    +  +          
Sbjct: 396 --RAQRDCATAFDRVSRHFAS-------LNPDLPLQRGYARVM-AGDRLVRSVEAARAAG 445

Query: 484 RILINFFDGQANAIVIN-KAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           +++++F DG  +A V   +AP    P+   +     R+    Q +LF
Sbjct: 446 QVVLHFHDGTVDAAVGQAEAPAGMAPSPSARPTRKPRDPAHAQQDLF 492


>gi|333016127|gb|EGK35459.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-227]
          Length = 456

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELSNQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|293415774|ref|ZP_06658417.1| exodeoxyribonuclease VII [Escherichia coli B185]
 gi|291433422|gb|EFF06401.1| exodeoxyribonuclease VII [Escherichia coli B185]
          Length = 456

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|333000697|gb|EGK20273.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri VA-6]
          Length = 456

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|307252394|ref|ZP_07534290.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859986|gb|EFM92003.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 517

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 92  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLR PTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQVQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +   +NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTKNLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|209919986|ref|YP_002294070.1| exodeoxyribonuclease VII large subunit [Escherichia coli SE11]
 gi|307312496|ref|ZP_07592129.1| exodeoxyribonuclease VII, large subunit [Escherichia coli W]
 gi|226694841|sp|B6I581|EX7L_ECOSE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|209913245|dbj|BAG78319.1| exonuclease VII large subunit [Escherichia coli SE11]
 gi|306907419|gb|EFN37923.1| exodeoxyribonuclease VII, large subunit [Escherichia coli W]
 gi|315061828|gb|ADT76155.1| exonuclease VII, large subunit [Escherichia coli W]
 gi|323377591|gb|ADX49859.1| exodeoxyribonuclease VII, large subunit [Escherichia coli KO11]
 gi|324020069|gb|EGB89288.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 117-3]
          Length = 456

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|156973388|ref|YP_001444295.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi ATCC
           BAA-1116]
 gi|166232371|sp|A7MU31|EX7L_VIBHB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|156524982|gb|ABU70068.1| hypothetical protein VIBHAR_01075 [Vibrio harveyi ATCC BAA-1116]
          Length = 443

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/494 (28%), Positives = 240/494 (48%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   
Sbjct: 3   SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E  K KL
Sbjct: 62  MFRGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+++P  VQG+E 
Sbjct: 122 AAEGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEEA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++A AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA
Sbjct: 182 AIQMAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +   
Sbjct: 236 VGHEVDVTIADFVADIRAPTPSAAAELVSRDNSHKDQALVTHQHKLASAMRYYLAQQKQQ 295

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L+  L   +    L     +LD L   L+  ++  I  + +      +R++ +  + 
Sbjct: 296 SAQLMHRLERQHPSYQLQRQTQQLDELEMRLQRAMQRFITTRQQAVERKHHRLQLNSPVK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + + +  +   +Q                                              
Sbjct: 356 RLAEQKSKLDRVEQ---------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            ++   +  K+ +    ++I    L + +   TLKRGY+  Q      +TQ +++ T   
Sbjct: 370 -KLLDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQVVTQAKDVKTGDV 428

Query: 485 ILINFFDGQANAIV 498
           ++    DG+  + V
Sbjct: 429 LVTRLSDGELRSTV 442


>gi|307247801|ref|ZP_07529837.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306855603|gb|EFM87770.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 517

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 33  NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL   G
Sbjct: 92  KNQRVIFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAASG 151

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 504 LSQGEIVSEIIKIN 517


>gi|110806440|ref|YP_689960.1| exodeoxyribonuclease VII large subunit [Shigella flexneri 5 str.
           8401]
 gi|123048016|sp|Q0T210|EX7L_SHIF8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110615988|gb|ABF04655.1| exonuclease VII, large subunit [Shigella flexneri 5 str. 8401]
          Length = 456

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSSRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|229505620|ref|ZP_04395130.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae BX 330286]
 gi|229517830|ref|ZP_04407274.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC9]
 gi|229344545|gb|EEO09519.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC9]
 gi|229357843|gb|EEO22760.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae BX 330286]
          Length = 464

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  + T    + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|254228660|ref|ZP_04922084.1| exodeoxyribonuclease VII, large subunit [Vibrio sp. Ex25]
 gi|151938839|gb|EDN57673.1| exodeoxyribonuclease VII, large subunit [Vibrio sp. Ex25]
          Length = 496

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 58  TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 116

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 117 RGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 176

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+I+P  VQG++   
Sbjct: 177 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 236

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 237 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 290

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +     
Sbjct: 291 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 350

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L+  L   +    L     +LD L   L+  +   I  + +       R++ +  +  +
Sbjct: 351 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 410

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +Q +                                              
Sbjct: 411 AEQKSKLERVEQKL---------------------------------------------- 424

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  K+ +    ++I    L + +   TLKRGY+  Q      ITQ  ++ +   ++
Sbjct: 425 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 483

Query: 487 INFFDGQANAIV 498
               +G   + V
Sbjct: 484 TRLAEGDVRSTV 495


>gi|30063901|ref|NP_838072.1| exodeoxyribonuclease VII large subunit [Shigella flexneri 2a str.
           2457T]
 gi|56480122|ref|NP_708348.2| exodeoxyribonuclease VII large subunit [Shigella flexneri 2a str.
           301]
 gi|81839397|sp|Q83QL0|EX7L_SHIFL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|30042156|gb|AAP17882.1| exonuclease VII, large subunit [Shigella flexneri 2a str. 2457T]
 gi|56383673|gb|AAN44055.2| exonuclease VII, large subunit [Shigella flexneri 2a str. 301]
 gi|281601911|gb|ADA74895.1| Exodeoxyribonuclease 7 large subunit [Shigella flexneri 2002017]
 gi|332755559|gb|EGJ85923.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-671]
 gi|332756205|gb|EGJ86556.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2747-71]
 gi|332766342|gb|EGJ96552.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2930-71]
          Length = 456

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             E LF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + + T   
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|300951786|ref|ZP_07165601.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 116-1]
 gi|300958861|ref|ZP_07170969.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 175-1]
 gi|300314513|gb|EFJ64297.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 175-1]
 gi|300448983|gb|EFK12603.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 116-1]
          Length = 456

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWGFNDERVARAIFTSRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|261340809|ref|ZP_05968667.1| exodeoxyribonuclease VII, large subunit [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317235|gb|EFC56173.1| exodeoxyribonuclease VII, large subunit [Enterobacter cancerogenus
           ATCC 35316]
          Length = 457

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/507 (28%), Positives = 233/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+ +++   
Sbjct: 3   SSQSPSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 SAEGLFDQQFKKALPTPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI + N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIERANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASVIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L N + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQLQNGQQRLEMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   L+  + R       +  R+       
Sbjct: 296 FTQLYHRLQQQHPQLRLARQQTVLERLRQRMNVALDGQLKRAASRQQRMAQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIYRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + Q + +     
Sbjct: 374 -----NVRARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQIKAGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V    P K+   +K
Sbjct: 429 LTTRLSDGWVESEVKAIKPVKKTRQRK 455


>gi|320200073|gb|EFW74662.1| Exodeoxyribonuclease VII large subunit [Escherichia coli EC4100B]
          Length = 456

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|331664069|ref|ZP_08364979.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA143]
 gi|284922456|emb|CBG35543.1| exodeoxyribonuclease 7 large subunit [Escherichia coli 042]
 gi|331059868|gb|EGI31845.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA143]
          Length = 458

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/510 (27%), Positives = 231/510 (45%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458


>gi|154245360|ref|YP_001416318.1| exodeoxyribonuclease VII large subunit [Xanthobacter autotrophicus
           Py2]
 gi|154159445|gb|ABS66661.1| exodeoxyribonuclease VII, large subunit [Xanthobacter autotrophicus
           Py2]
          Length = 496

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 193/525 (36%), Positives = 281/525 (53%), Gaps = 48/525 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            +   + PE+SVSELS  L+  VE    HV VRGEISGYRG H SGHAYFSLKD  +R+D
Sbjct: 17  AEPRANAPEWSVSELSAALRRTVEDAYGHVRVRGEISGYRGPHGSGHAYFSLKDAGARLD 76

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           A+IWKGT  ++   PEEG+E + IG++TT+PG S YQI+IE+L  +G+G ++  LE+RK+
Sbjct: 77  AVIWKGTFQRLRLKPEEGLEVVAIGRLTTYPGKSGYQIVIEALEFAGAGAIMAMLEERKR 136

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           +L  EGLF    K  +PF+P++I V+TSPTGAVIRDIL R+  RFP RV+++PV+VQG+ 
Sbjct: 137 RLSAEGLFDPARKVALPFLPQVIGVVTSPTGAVIRDILHRLDDRFPRRVLVWPVRVQGET 196

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+A AI   N L  G   PRPD+I++ARGGG++EDL  F+DE +VRA A S+IP+++
Sbjct: 197 SAAEVAAAIRGFNALPAGGAIPRPDVIVVARGGGALEDLLGFSDEEVVRAAAESAIPLVA 256

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+AAD+RAPTPT AAEM VPV+  L +++ +L  RL    +RL++ +  
Sbjct: 257 AVGHETDVTLIDFAADVRAPTPTAAAEMVVPVRSELIAAVEDLGGRLAAAPVRLLERRRA 316

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L  L + LP+++  LS  R RLD     L   L+               R+  + L   
Sbjct: 317 DLRGLSRLLPSAENLLSVPRQRLDAASERLPRALKANAAAHRLRLVAARARLSPEALRLR 376

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++    +      +++                                           
Sbjct: 377 LERAGDRLETLDGRLKRAFSVAREQRA--------------------------------A 404

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+                   ++L + ++K  L RG+  ++D     +     L   T +
Sbjct: 405 RLRSA---------------GQLLDALSFKGVLSRGFALVRDAQGQPVRLAAGLTAGTAL 449

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG-ELF 529
            + F DG   A+  +  P               R+    +G  LF
Sbjct: 450 DLEFADGHVAAVTGDVVPAATPAAPARPRPAKSRKPPKVEGPTLF 494


>gi|323170220|gb|EFZ55873.1| exodeoxyribonuclease VII, large subunit [Escherichia coli LT-68]
          Length = 456

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRTQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|323499813|ref|ZP_08104772.1| exodeoxyribonuclease VII large subunit [Vibrio sinaloensis DSM
           21326]
 gi|323315054|gb|EGA68106.1| exodeoxyribonuclease VII large subunit [Vibrio sinaloensis DSM
           21326]
          Length = 443

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/495 (28%), Positives = 240/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++  
Sbjct: 2   SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    ++ K K
Sbjct: 61  AMFRGNNRRVSFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDELKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+I+P  VQG+E
Sbjct: 121 LAGEGLFAQTNKRPLPEHPKRVGVITSKTGAALLDILDVLKRRDPSLPVVIYPTMVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N+  E       D++I+ RGGGS+EDLW FN+E++ R IA+S IPIIS
Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIASSQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ AD+RAPTP+ AAE+      H   +    + +L + I   +  +  
Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKAQTFQARQHKLLSAIRYYLAEQKQ 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             + L+  L   +    L     +LD L   L+  ++ +I  + +      +R++    +
Sbjct: 295 HASQLMHRLERQHPSYQLQRQSQQLDELDMRLQRAMKQLITTRQQSVERKHHRLQLASPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + R  +   +Q                                             
Sbjct: 355 TRLAEQRSKLDRAEQ--------------------------------------------- 369

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             ++   +  K+ +    ++I    L + +   TLKRGY+  Q      +TQ  ++ T  
Sbjct: 370 --KLMDAMDRKLLTARHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQVVTQATDVKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLADGELRSTV 442


>gi|90416233|ref|ZP_01224165.1| exodeoxyribonuclease VII large subunit [marine gamma
           proteobacterium HTCC2207]
 gi|90331958|gb|EAS47172.1| exodeoxyribonuclease VII large subunit [marine gamma
           proteobacterium HTCC2207]
          Length = 449

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/503 (29%), Positives = 239/503 (47%), Gaps = 59/503 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MNP    N  +   +SVS+L+  ++H++E+ L  + V GEIS +    +SGH Y +LKD+
Sbjct: 1   MNP----NPSERQVFSVSQLNRSVRHLIETQLPLLWVEGEISNF-ARPASGHWYLTLKDD 55

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++    ++ F P  G + LV  +   + G  +YQ++IE +  +G G L    
Sbjct: 56  QAQVRCAMFRNANQRVGFKPANGTQVLVRCRAGLYEGRGEYQLVIEHMEEAGFGALQRQF 115

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K+KL +EGLF +QHK P+P     I VITS TGA ++D+L  ++ RFP ++V IFP 
Sbjct: 116 EQLKQKLSDEGLFDNQHKRPMPDSVSHIGVITSATGAAVKDVLSVLARRFPSIKVSIFPT 175

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG++  K+I  AI   N L +       D +I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 176 AVQGEQAAKQIVEAINNANQLGQ------CDALIVGRGGGSLEDLWPFNEEVVARAIFAS 229

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IPI+SA+GHE D+T+AD+ ADLRAPTP+ AAE+  P  E + +     E  L   + R 
Sbjct: 230 AIPIVSAVGHEVDFTIADFVADLRAPTPSAAAELLSPDGEDILNQFEGFEILLTEAVGRK 289

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           I         L K L +    L      LD L   L   ++  + ++ +  N +  ++  
Sbjct: 290 ISQLRQRTEYLKKRLRHPGHKLQEQSQHLDHLDIRLRRAIDNKLEQRRQQINRVQAQLAR 349

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 I    Q +    + + +                                     
Sbjct: 350 VHPGEAIGDYHQLVARYVKQMSR------------------------------------- 372

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                      +  +++   +       +L + +   TL RGY+ I+DT+N  +    +L
Sbjct: 373 ----------TVRQQLEVRRSKTGQAMHLLDTVSPLKTLGRGYSIIRDTDNAVVKSVASL 422

Query: 480 ATKTRILINFFDGQANAIVINKA 502
                +     DG+    V    
Sbjct: 423 NKGDMLRGQLEDGEVILAVTGTN 445


>gi|229523412|ref|ZP_04412819.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TM
           11079-80]
 gi|229339775|gb|EEO04790.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TM
           11079-80]
          Length = 464

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/491 (29%), Positives = 241/491 (49%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  +      + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTAQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|229530104|ref|ZP_04419494.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae 12129(1)]
 gi|229333878|gb|EEN99364.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae 12129(1)]
          Length = 464

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  + T    + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|74313035|ref|YP_311454.1| exodeoxyribonuclease VII large subunit [Shigella sonnei Ss046]
 gi|187731397|ref|YP_001881300.1| exodeoxyribonuclease VII large subunit [Shigella boydii CDC
           3083-94]
 gi|191167680|ref|ZP_03029489.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B7A]
 gi|193068370|ref|ZP_03049333.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E110019]
 gi|218555034|ref|YP_002387947.1| exodeoxyribonuclease VII large subunit [Escherichia coli IAI1]
 gi|218696136|ref|YP_002403803.1| exodeoxyribonuclease VII large subunit [Escherichia coli 55989]
 gi|256017343|ref|ZP_05431208.1| exodeoxyribonuclease VII large subunit [Shigella sp. D9]
 gi|293446862|ref|ZP_06663284.1| exodeoxyribonuclease VII [Escherichia coli B088]
 gi|300817721|ref|ZP_07097936.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 107-1]
 gi|300820821|ref|ZP_07100971.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 119-7]
 gi|300903525|ref|ZP_07121448.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 84-1]
 gi|300927128|ref|ZP_07142876.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 182-1]
 gi|301302866|ref|ZP_07208994.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 124-1]
 gi|301330400|ref|ZP_07223042.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 78-1]
 gi|309794444|ref|ZP_07688867.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 145-7]
 gi|331678500|ref|ZP_08379175.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H591]
 gi|332278338|ref|ZP_08390751.1| exonuclease VII large subunit [Shigella sp. D9]
 gi|123745956|sp|Q3YZ43|EX7L_SHISS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694650|sp|B7M7L3|EX7L_ECO8A RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697609|sp|B2TXT4|EX7L_SHIB3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783700|sp|B7LCP9|EX7L_ECO55 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|73856512|gb|AAZ89219.1| exonuclease VII, large subunit [Shigella sonnei Ss046]
 gi|187428389|gb|ACD07663.1| exodeoxyribonuclease VII, large subunit [Shigella boydii CDC
           3083-94]
 gi|190902279|gb|EDV62019.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B7A]
 gi|192958322|gb|EDV88762.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E110019]
 gi|218352868|emb|CAU98667.1| exonuclease VII, large subunit [Escherichia coli 55989]
 gi|218361802|emb|CAQ99401.1| exonuclease VII, large subunit [Escherichia coli IAI1]
 gi|291323692|gb|EFE63120.1| exodeoxyribonuclease VII [Escherichia coli B088]
 gi|300404460|gb|EFJ87998.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 84-1]
 gi|300416898|gb|EFK00209.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 182-1]
 gi|300526574|gb|EFK47643.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 119-7]
 gi|300529709|gb|EFK50771.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 107-1]
 gi|300841801|gb|EFK69561.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 124-1]
 gi|300843629|gb|EFK71389.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 78-1]
 gi|308121900|gb|EFO59162.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 145-7]
 gi|315256529|gb|EFU36497.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 85-1]
 gi|320175072|gb|EFW50185.1| Exodeoxyribonuclease VII large subunit [Shigella dysenteriae CDC
           74-1112]
 gi|320185209|gb|EFW59989.1| Exodeoxyribonuclease VII large subunit [Shigella flexneri CDC
           796-83]
 gi|323169047|gb|EFZ54724.1| exodeoxyribonuclease VII, large subunit [Shigella sonnei 53G]
 gi|323184430|gb|EFZ69805.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1357]
 gi|323944731|gb|EGB40798.1| exodeoxyribonuclease VII [Escherichia coli H120]
 gi|324118147|gb|EGC12044.1| exodeoxyribonuclease VII [Escherichia coli E1167]
 gi|331074960|gb|EGI46280.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H591]
 gi|332092786|gb|EGI97855.1| exodeoxyribonuclease VII, large subunit [Shigella boydii 3594-74]
 gi|332100690|gb|EGJ04036.1| exonuclease VII large subunit [Shigella sp. D9]
          Length = 456

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|15640785|ref|NP_230415.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121585732|ref|ZP_01675527.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 2740-80]
 gi|121725972|ref|ZP_01679271.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V52]
 gi|153817270|ref|ZP_01969937.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae NCTC 8457]
 gi|227080945|ref|YP_002809496.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae M66-2]
 gi|254847903|ref|ZP_05237253.1| exodeoxyribonuclease 7 large subunit [Vibrio cholerae MO10]
 gi|255744572|ref|ZP_05418523.1| exodeoxyribonuclease VII large subunit [Vibrio cholera CIRS 101]
 gi|262161293|ref|ZP_06030404.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae INDRE 91/1]
 gi|298499101|ref|ZP_07008908.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MAK 757]
 gi|14194729|sp|Q9KTW4|EX7L_VIBCH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783717|sp|C3LT19|EX7L_VIBCM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|9655213|gb|AAF93931.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121550095|gb|EAX60111.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 2740-80]
 gi|121631454|gb|EAX63824.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V52]
 gi|126512186|gb|EAZ74780.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae NCTC 8457]
 gi|227008833|gb|ACP05045.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae M66-2]
 gi|254843608|gb|EET22022.1| exodeoxyribonuclease 7 large subunit [Vibrio cholerae MO10]
 gi|255737603|gb|EET92997.1| exodeoxyribonuclease VII large subunit [Vibrio cholera CIRS 101]
 gi|262029043|gb|EEY47696.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae INDRE 91/1]
 gi|297543434|gb|EFH79484.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MAK 757]
          Length = 446

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|311694943|gb|ADP97816.1| exodeoxyribonuclease VII large subunit [marine bacterium HP15]
          Length = 462

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/509 (29%), Positives = 232/509 (45%), Gaps = 56/509 (11%)

Query: 3   PFSQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           P +       P   SVSEL++  +H++ES+   V V GE+SG     SSGH YFSLKD  
Sbjct: 8   PATPHLQDTRPRALSVSELNHQARHLLESSFMQVWVEGELSGL-SRPSSGHWYFSLKDRK 66

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
            ++   +++G   +I   P+EG +  + GK+T +     +QII+E + P+G G L  A E
Sbjct: 67  CQVRCAMFRGMNQRIRTPPKEGDQVRIRGKVTLYENRGDFQIIVEHVEPAGLGALQQAFE 126

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K+KLL EGLF    K P+P +P+ I V+TSPTGA I DIL  ++ R P + V ++P  
Sbjct: 127 ELKRKLLAEGLFEQASKKPLPSLPRHIGVVTSPTGAAIHDILTVLARRCPAIPVTLYPTA 186

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  AI         +     D++I+ RGGGS+EDLW FN+E + RAIA   
Sbjct: 187 VQGKAATADIVRAIEA------AQNHGVADVLIIGRGGGSLEDLWCFNEEAVARAIAACR 240

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP +SA+GHE D T+AD+ ADLRAPTP+ AAE   P +      L + E RL+N +   +
Sbjct: 241 IPTVSAVGHEVDVTIADFVADLRAPTPSAAAEKISPDQSDWLKQLRDREFRLSNAMGLAL 300

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           K     L  L   L +  + L     R+D L   L   +   +       +H+  R+   
Sbjct: 301 KRLGTQLGHLSARLRDPRRELLEKAQRMDELELRLRKAIRQRLTTVGVRNDHLRQRLVMQ 360

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +  ++  +    + +                                +  +   +
Sbjct: 361 SPHRQLSDSQDALRRVSERL--------------------------------VSVMQQDL 388

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K+    +                   + L   +   TL RGY+ ++D N N +    N+ 
Sbjct: 389 KQRRDNL---------------EHAAQTLNVVSPLATLGRGYSIVRDNNGNILRDASNVN 433

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509
               I      G+  A V +    +E   
Sbjct: 434 PGDTISARVARGEMTAKVTSVKSAEETGP 462


>gi|16130434|ref|NP_417004.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89109315|ref|AP_003095.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|170082119|ref|YP_001731439.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|194437699|ref|ZP_03069795.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 101-1]
 gi|238901674|ref|YP_002927470.1| exonuclease VII, large subunit [Escherichia coli BW2952]
 gi|253772597|ref|YP_003035428.1| exodeoxyribonuclease VII large subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162483|ref|YP_003045591.1| exodeoxyribonuclease VII large subunit [Escherichia coli B str.
           REL606]
 gi|256021805|ref|ZP_05435670.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 4_1_40B]
 gi|300930149|ref|ZP_07145570.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 187-1]
 gi|301022367|ref|ZP_07186256.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 196-1]
 gi|301648264|ref|ZP_07248007.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 146-1]
 gi|307139144|ref|ZP_07498500.1| exodeoxyribonuclease VII large subunit [Escherichia coli H736]
 gi|331643129|ref|ZP_08344264.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H736]
 gi|2507019|sp|P04994|EX7L_ECOLI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694651|sp|B1XAY4|EX7L_ECODH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|259646288|sp|C4ZX84|EX7L_ECOBW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|1788856|gb|AAC75562.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|1805569|dbj|BAA16396.1| exonuclease VII, large subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|169889954|gb|ACB03661.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|194423505|gb|EDX39496.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 101-1]
 gi|238861056|gb|ACR63054.1| exonuclease VII, large subunit [Escherichia coli BW2952]
 gi|242378107|emb|CAQ32880.1| exonuclease VII, large subunit, subunit of exonuclease VII
           [Escherichia coli BL21(DE3)]
 gi|253323641|gb|ACT28243.1| exodeoxyribonuclease VII, large subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974384|gb|ACT40055.1| exodeoxyribonuclease VII large subunit [Escherichia coli B str.
           REL606]
 gi|253978551|gb|ACT44221.1| exodeoxyribonuclease VII large subunit [Escherichia coli BL21(DE3)]
 gi|260448411|gb|ACX38833.1| exodeoxyribonuclease VII, large subunit [Escherichia coli DH1]
 gi|299881280|gb|EFI89491.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 196-1]
 gi|300461955|gb|EFK25448.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 187-1]
 gi|301073651|gb|EFK88457.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 146-1]
 gi|309702841|emb|CBJ02172.1| exodeoxyribonuclease 7 large subunit [Escherichia coli ETEC H10407]
 gi|315137133|dbj|BAJ44292.1| exodeoxyribonuclease VII large subunit [Escherichia coli DH1]
 gi|315615768|gb|EFU96400.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 3431]
 gi|323936402|gb|EGB32692.1| exodeoxyribonuclease VII [Escherichia coli E1520]
 gi|323961319|gb|EGB56931.1| exodeoxyribonuclease VII [Escherichia coli H489]
 gi|331039927|gb|EGI12147.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H736]
 gi|332344381|gb|AEE57715.1| exodeoxyribonuclease VII, large subunit XseA [Escherichia coli
           UMNK88]
          Length = 456

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|330445252|ref|ZP_08308904.1| exodeoxyribonuclease VII, large subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489443|dbj|GAA03401.1| exodeoxyribonuclease VII, large subunit [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 449

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 140/502 (27%), Positives = 237/502 (47%), Gaps = 57/502 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  FS ++  +   Y+VS L+  ++ I+E+ +  V + GE+S +  +  SGH YF+LKD+
Sbjct: 1   MTTFSPQSQTNSRIYTVSSLNAQVRLILENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG+   + F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 60  RAQVKCAMFKGSNRHVTFKPGNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K  +P  PK + +ITS TGA + DIL  +  R P L ++I+P 
Sbjct: 120 EQLKMSLAAEGLFAQSLKKSLPEQPKRVGIITSKTGAALHDILHVLQRRDPSLPIVIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     IA AI + N  +E       D++I+ RGGGS+EDLW FN+E++ R IA S
Sbjct: 180 MVQGEGAAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H    L     +L + I   
Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLDRKRQQLRHAITAY 293

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +   +     L   L   +    L+  +  LD + + L   +   I +  +H  H   ++
Sbjct: 294 LSQSLRQTTQLQHRLERQHPQLRLNLQQQHLDEISQRLTQAMAKKIQKHQKHVEHNNYKL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   ++  +Q++   +Q                                       
Sbjct: 354 SLYSPASLVRNAQQNLERSEQR-------------------------------------- 375

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                    +   L  K+ +    +++    L++ +   TL RGY+  ++   + I +  
Sbjct: 376 ---------LYDALDRKLLNARHKLAVAAEKLETVSPLATLARGYSITRNEQGDVIRKAS 426

Query: 478 NLATKTRILINFFDGQANAIVI 499
            +     ++    DG+ ++ VI
Sbjct: 427 QVKAGDTLITTVTDGEIHSSVI 448


>gi|283786123|ref|YP_003365988.1| exodeoxyribonuclease 7 large subunit [Citrobacter rodentium ICC168]
 gi|282949577|emb|CBG89195.1| exodeoxyribonuclease 7 large subunit [Citrobacter rodentium ICC168]
          Length = 457

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/508 (28%), Positives = 236/508 (46%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S +   ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSPNSTIFTVSRLNQTVRLLLEQEMGQVWISGEISNF-SQPASGHWYFTLKDDAAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRASITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DILQ +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILQVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANRRSE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+  DLRAPTP+ AAEM    ++ L   + +++ RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVGDLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLASRHRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   DRL + L   ++  + R  +    ++ R+       
Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTALDRLRQRLNVAIDSQLKRTNQRQLRLLQRLNHHHPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + +   +     
Sbjct: 374 -----NIRARLSATRERFGNAVTHLEAVSPLSTLARGYSVSTATDGKILKKVNQVKAGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V      K+   +K 
Sbjct: 429 MTTRLADGWVESEVTAVKAAKKSRQRKS 456


>gi|170679853|ref|YP_001744694.1| exodeoxyribonuclease VII large subunit [Escherichia coli SMS-3-5]
 gi|226694873|sp|B1LNG1|EX7L_ECOSM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|170517571|gb|ACB15749.1| exodeoxyribonuclease VII, large subunit [Escherichia coli SMS-3-5]
          Length = 455

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/507 (28%), Positives = 231/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+KN +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKNSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +H   +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQHQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      ++   K 
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455


>gi|262402849|ref|ZP_06079410.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC586]
 gi|262351631|gb|EEZ00764.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC586]
          Length = 446

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K  +P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKALPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N   E       D++I+ RGGGS+EDLW FN E++ R IA S IP+I
Sbjct: 181 DAAIQIAQAIGRANARSE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPVI 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASAMRHYLTQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                +   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMQHRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH +++ R H+++++Q I Q                                        
Sbjct: 355 IHLVRQQRFHLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + H +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQHYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|168243287|ref|ZP_02668219.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194447717|ref|YP_002046572.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|226697604|sp|B4TD84|EX7L_SALHS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194406021|gb|ACF66240.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205337649|gb|EDZ24413.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 449

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|218706010|ref|YP_002413529.1| exodeoxyribonuclease VII large subunit [Escherichia coli UMN026]
 gi|293405947|ref|ZP_06649939.1| exodeoxyribonuclease 7 large subunit [Escherichia coli FVEC1412]
 gi|298381749|ref|ZP_06991348.1| exodeoxyribonuclease VII large subunit [Escherichia coli FVEC1302]
 gi|300898391|ref|ZP_07116734.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 198-1]
 gi|226694666|sp|B7N693|EX7L_ECOLU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218433107|emb|CAR14002.1| exonuclease VII, large subunit [Escherichia coli UMN026]
 gi|291428155|gb|EFF01182.1| exodeoxyribonuclease 7 large subunit [Escherichia coli FVEC1412]
 gi|298279191|gb|EFI20705.1| exodeoxyribonuclease VII large subunit [Escherichia coli FVEC1302]
 gi|300357931|gb|EFJ73801.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 198-1]
          Length = 458

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 142/510 (27%), Positives = 231/510 (45%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLWLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458


>gi|229513095|ref|ZP_04402561.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TMA 21]
 gi|229349988|gb|EEO14942.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TMA 21]
          Length = 464

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  + T    + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|153828281|ref|ZP_01980948.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 623-39]
 gi|148876235|gb|EDL74370.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 623-39]
          Length = 446

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQRRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|283832115|ref|ZP_06351856.1| exodeoxyribonuclease VII, large subunit [Citrobacter youngae ATCC
           29220]
 gi|291071743|gb|EFE09852.1| exodeoxyribonuclease VII, large subunit [Citrobacter youngae ATCC
           29220]
          Length = 457

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 148/508 (29%), Positives = 233/508 (45%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+ +++   
Sbjct: 3   SSQTTSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     I VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCIGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+  DLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVGDLRAPTPSAAAEIVSRNQQELLRQIQSSQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L   L      L  +R +   +RL + +   LE  I +  +    ++ R+       
Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTTLERLRQRMSTALENQIKQANQRQQRMLQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++             L++ +   TL RGY+    TN   + + R +     
Sbjct: 374 -----NIRTRLSVHRERFGNAVTHLEAVSPLATLARGYSVSTATNGGVLKKVRQVKAGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V    P K+   +K 
Sbjct: 429 MTTRLEDGWVESEVTKVTPQKKTRARKA 456


>gi|322514318|ref|ZP_08067372.1| exodeoxyribonuclease VII large subunit [Actinobacillus ureae ATCC
           25976]
 gi|322119786|gb|EFX91818.1| exodeoxyribonuclease VII large subunit [Actinobacillus ureae ATCC
           25976]
          Length = 486

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E  L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 2   NNILTITQLNYSVRNLLEMELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 61  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N   E       D++I+ RGGGS EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VNTIDLANRRCE------CDVLIVGRGGGSFEDLWCFNEESVAHAIFRSDIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K  +   L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWAEKQASFERL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +    H +Q+
Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFNYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQHQLQQ 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q+++Q L     + K     +          +   +    +L  R++
Sbjct: 355 QQMQLKQAEYRLVQVIEQTLIRKQNQWKHIAEQVKH--NPLPYYVEKKNQQYAQLAQRLQ 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +   +NL   T+I   
Sbjct: 413 FAIEKKLTKEQQAFQELCTKIDGLSPLKILARGYSVTQTSQGEILRSTKNLEVGTQITTK 472

Query: 489 FFDGQANAIVINKA 502
              G+  + ++   
Sbjct: 473 LSQGEIVSEIVKIN 486


>gi|188496216|ref|ZP_03003486.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 53638]
 gi|188491415|gb|EDU66518.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 53638]
          Length = 456

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +R  + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERQKKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|260776625|ref|ZP_05885520.1| exodeoxyribonuclease VII large subunit [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607848|gb|EEX34113.1| exodeoxyribonuclease VII large subunit [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 443

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH YF+LKD+ +++  
Sbjct: 2   SSLTNQNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYFTLKDSRAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    E+ K K
Sbjct: 61  AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K  +P  PK + V+TS TGA + DIL  +  R P L V+I+P  VQG++
Sbjct: 121 LAGEGLFAQTSKQTLPEHPKRVGVVTSKTGAALFDILDVLKRRDPSLPVVIYPTLVQGED 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEVVARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ AD+RAPTP+ AAE+      H   ++   + +L++ I   +     
Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKAQAINTRQHKLHSAIRHYLTKHKQ 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             ++L   L   +    L     +LD L   L+ ++E  +  + ++      +++    +
Sbjct: 295 NTSALQHRLERQHPSHQLQRQSQQLDELSVRLQRSMERYLTTRSQNVERQQYKLQLHSPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + +  +    Q +EQ +   +    L  +                           
Sbjct: 355 ARLNEQKLSL----QRLEQTLMDAMDRKLLNSR--------------------------- 383

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                             +++ T  L + +   TLKRGY+  QD +   +T+     T  
Sbjct: 384 ----------------HQLALATEKLDTVSPLATLKRGYSITQDASGKVLTKAAETKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+ ++ V
Sbjct: 428 TLVTRLSDGEIHSTV 442


>gi|153824580|ref|ZP_01977247.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-2]
 gi|149741798|gb|EDM55827.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-2]
          Length = 446

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLSNRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|323491639|ref|ZP_08096818.1| exodeoxyribonuclease VII large subunit [Vibrio brasiliensis LMG
           20546]
 gi|323314215|gb|EGA67300.1| exodeoxyribonuclease VII large subunit [Vibrio brasiliensis LMG
           20546]
          Length = 443

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 239/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++  
Sbjct: 2   SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    E+ K K
Sbjct: 61  AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K P+P  PK + VITS TGA + DIL  +  R P L VI++P  VQG+E
Sbjct: 121 LAGEGLFAQTSKKPLPEHPKRVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ AD+RAPTP+ AAE+      H   +LI+ + +L   +   +  +  
Sbjct: 235 AVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALISRQHKLVAAMRYYLSEQKR 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              SL   L   + +  L     +LD L   L  +++  I  +++    + +RI  +  +
Sbjct: 295 CAASLEHRLERQHPNYQLQRQSQQLDELEVRLHRSMQQYIGVRHQKVERLQHRIALNSPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + +  +   +Q +   +                                       
Sbjct: 355 RRLAEQKATLQRLEQKLLDAM--------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     K+ +    +++    L + +   TLKRGY+  Q      I +  ++ T  
Sbjct: 376 --------DRKLLNTRHQLALAAEKLDTVSPLATLKRGYSITQTEQGKVIVRGSDVKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLSDGEVRSTV 442


>gi|327483549|gb|AEA77956.1| Exodeoxyribonuclease VII large subunit [Vibrio cholerae LMA3894-4]
          Length = 446

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|328472589|gb|EGF43452.1| exodeoxyribonuclease VII large subunit [Vibrio parahaemolyticus
           10329]
          Length = 443

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/493 (28%), Positives = 238/493 (48%), Gaps = 57/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 5   TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 64  RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+I+P  VQGD+   
Sbjct: 124 EGLFAQTNKLPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   SL+  + +L + +   +  +     
Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLAQQKQQSA 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            LL  L   +    L     +LD L   L   ++  I  + +      +R++ +  I ++
Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSPIKHL 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +                                                +
Sbjct: 358 AQQKSRLERVEH-----------------------------------------------K 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  K+ +    ++I    L + +   TLKRGY+  Q      +T   ++ T   ++
Sbjct: 371 LMDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTDQGKVVTSADDVKTGDLLV 430

Query: 487 INFFDGQANAIVI 499
               +G+ ++ V 
Sbjct: 431 TRLANGEIHSTVS 443


>gi|153800572|ref|ZP_01955158.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-3]
 gi|124123861|gb|EAY42604.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-3]
          Length = 446

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/496 (28%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH +++ R ++++++Q I Q                                        
Sbjct: 355 IHLVRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|301024738|ref|ZP_07188378.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 69-1]
 gi|300396407|gb|EFJ79945.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 69-1]
          Length = 458

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VIIFP  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIFPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIEMANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458


>gi|303251375|ref|ZP_07337553.1| exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302649917|gb|EFL80095.1| exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 486

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 2   NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 61  KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 121 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLR PTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 235 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 295 KLRLNAQHPARQVQVQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +   +NL   T+I   
Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTKNLKVGTQITTK 472

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 473 LSQGEIVSEIIKIN 486


>gi|28897389|ref|NP_796994.1| exodeoxyribonuclease VII large subunit [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153838535|ref|ZP_01991202.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ3810]
 gi|260363547|ref|ZP_05776376.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           K5030]
 gi|260876348|ref|ZP_05888703.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|260898619|ref|ZP_05907115.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|260899281|ref|ZP_05907676.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|31563075|sp|Q87S09|EX7L_VIBPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|28805601|dbj|BAC58878.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149748050|gb|EDM58909.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ3810]
 gi|308086877|gb|EFO36572.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           Peru-466]
 gi|308092888|gb|EFO42583.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AN-5034]
 gi|308106612|gb|EFO44152.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ4037]
 gi|308113047|gb|EFO50587.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           K5030]
          Length = 443

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/493 (28%), Positives = 240/493 (48%), Gaps = 57/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 5   TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 64  RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + +ITS TGA + DIL  +  R P L V+I+P  VQGD+   
Sbjct: 124 EGLFAQTNKLPLPEHPKRVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   SL+  + +L + +   +  +     
Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSA 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            LL  L   +    L     +LD L   L   ++  I  + +      +R++ +  + ++
Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSPVKHL 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +                                               +++  +
Sbjct: 358 AQQKSRL-----------------------------------------------ERVEHK 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  K+ +    ++I    L + +   TLKRGY+  Q      +T   ++ T   ++
Sbjct: 371 LLDTMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVVTSADDVKTGDLLV 430

Query: 487 INFFDGQANAIVI 499
               +G+ ++ V 
Sbjct: 431 TRLANGEIHSTVS 443


>gi|294677914|ref|YP_003578529.1| exodeoxyribonuclease VII large subunit [Rhodobacter capsulatus SB
           1003]
 gi|294476734|gb|ADE86122.1| exodeoxyribonuclease VII, large subunit [Rhodobacter capsulatus SB
           1003]
          Length = 487

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 191/522 (36%), Positives = 271/522 (51%), Gaps = 49/522 (9%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S + PE++VSE+S  +K ++E   + V VRGE+ G      SGH YF LKD ++ I A+
Sbjct: 15  PSGNTPEFTVSEISGAVKRVIEGEFTRVRVRGEV-GRVSRPGSGHLYFDLKDPNAVIAAV 73

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
            WKG + +++  PEEG+E +  GK+TTFPG SKYQ+I++ + P+G+G L+  LE R+K L
Sbjct: 74  SWKGQVARMQIRPEEGMEVIATGKLTTFPGQSKYQLIVDDVEPAGAGALMAMLEARRKAL 133

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187
             EGLF    K PIP++P +I V+TSP+GAVIRDIL R+  RFP RV+I+PV VQG  C 
Sbjct: 134 AAEGLFDPARKKPIPYLPAVIGVVTSPSGAVIRDILHRLRDRFPRRVLIWPVAVQGQACA 193

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            E+A AI   N L  G   PRPD+II+ARGGGS+EDLW FN+E +VRA A S IP+ISA+
Sbjct: 194 AEVAAAIRGFNALAPGGKVPRPDLIIVARGGGSLEDLWGFNEEAVVRAAAESKIPLISAV 253

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TL D+AAD RAPTPT AAEMAVPV+  L + L  ++AR++      +  +   L
Sbjct: 254 GHETDTTLIDFAADRRAPTPTAAAEMAVPVRAELATRLSEMQARISRATQTRMASRAQRL 313

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L +AL   +      R R D +   L   L +++ RK   F  +  RI    L   ++
Sbjct: 314 ADLSRALGRPEAITRPRRQRFDLVADRLLPALRMVVVRKRAAFAPLEARISPKLLQTYLR 373

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             R  +      + +  +                                        R+
Sbjct: 374 VERDRLAGLSDRLLRAEQ---------------------------------------ARL 394

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                          +    +LQ+  Y+ TL+RGY  ++   +  +T     A    + I
Sbjct: 395 TRA--------QDRFARLAAMLQTLGYQETLRRGYAVVRGPADQVLTSAATAAGLAPLEI 446

Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            F DG+   +  +   P     K         +    QG LF
Sbjct: 447 EFQDGRLRVLPSDAP-PPAPAPKPAAKPRKAAKTPPDQGSLF 487


>gi|162139561|ref|YP_217497.2| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|198243207|ref|YP_002216577.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205353614|ref|YP_002227415.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857922|ref|YP_002244573.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224582952|ref|YP_002636750.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|226697601|sp|B5FR54|EX7L_SALDC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697602|sp|B5R571|EX7L_SALEP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697603|sp|B5RCY1|EX7L_SALG2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783707|sp|C0PYP2|EX7L_SALPC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|197937723|gb|ACH75056.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205273395|emb|CAR38367.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709725|emb|CAR34075.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467479|gb|ACN45309.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322715565|gb|EFZ07136.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326624332|gb|EGE30677.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628713|gb|EGE35056.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 449

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|168817734|ref|ZP_02829734.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205344866|gb|EDZ31630.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320087005|emb|CBY96774.1| Exonuclease VII, large subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 449

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|16765832|ref|NP_461447.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167991817|ref|ZP_02572916.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|197262096|ref|ZP_03162170.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|22095670|sp|Q8ZN58|EX7L_SALTY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|16421055|gb|AAL21406.1| exonuclease VII, large subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197240351|gb|EDY22971.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205329864|gb|EDZ16628.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261247709|emb|CBG25536.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994624|gb|ACY89509.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159062|emb|CBW18575.1| Probable exodeoxyribonuclease VII large subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913498|dbj|BAJ37472.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222788|gb|EFX47859.1| Exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130840|gb|ADX18270.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332989440|gb|AEF08423.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 449

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQCVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|194432106|ref|ZP_03064395.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1012]
 gi|194419635|gb|EDX35715.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1012]
 gi|332089722|gb|EGI94823.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae
           155-74]
          Length = 456

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L  II+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPAIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|254285484|ref|ZP_04960448.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae AM-19226]
 gi|150424346|gb|EDN16283.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae AM-19226]
          Length = 446

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGKILSTV 443


>gi|317490877|ref|ZP_07949313.1| exodeoxyribonuclease VII [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920424|gb|EFV41747.1| exodeoxyribonuclease VII [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 458

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/507 (28%), Positives = 231/507 (45%), Gaps = 57/507 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
               P ++VS L+  ++ ++E  +  + + GEIS      SSGH YF+LKD+ +++   +
Sbjct: 4   PSSPPIFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDDRAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ +  ++ F P+ G + L+   IT +     YQ+I ES+ P+G G L    E+ K++L 
Sbjct: 63  FRNSNRRVAFRPQNGQQILMRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQRLQ 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           EEGLF   HK P+P   + + V+TS +GA + DIL  +  R P L VII+P  VQG + P
Sbjct: 123 EEGLFDPAHKKPLPSPARCVGVVTSSSGAALHDILNVLQRRDPSLPVIIYPTAVQGVDAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N  KE       D++I+ RGGGS+EDLW FNDE + +AI  S IPI+SA+
Sbjct: 183 MQIVRAIELANQRKE------CDVLIVGRGGGSLEDLWSFNDERVAKAIFASQIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+  DLRAPTP+ AAE+    +  L   +++ + R+   +   +       
Sbjct: 237 GHETDVTIADFVGDLRAPTPSAAAELVSRNQTELMRQMLSQQQRMEMAMDYYLARHQQRF 296

Query: 308 NSLLKALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R    L +L R L+  ++  +    R    +  R+        
Sbjct: 297 TRLNHRLQQQHPQLRLARQNTLLLKLRRRLDEAVQTRLRLAERQQERLSQRLNQQQPSAQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+N+Q + +                                                  
Sbjct: 357 IQRNQQRLAQIHNR---------------------------------------------- 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +E ++  ++ S           L+  +   TL RG++  Q  N N +   + +     +
Sbjct: 371 -MELLIQRQLSSSRERFGALCSQLEGVSPLATLSRGFSVTQSPNGNVLKSVKQVNNGELL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKC 512
                DG   + V    P  ++   K 
Sbjct: 430 KTRLQDGWIESTVTAITPHPKKRVSKR 456


>gi|16761429|ref|NP_457046.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140874|ref|NP_804216.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213421227|ref|ZP_03354293.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213647445|ref|ZP_03377498.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852549|ref|ZP_03382081.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|22095668|sp|Q8Z4Q1|EX7L_SALTI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|25289164|pir||AF0820 exodeoxyribonuclease VII (EC 3.1.11.6) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503729|emb|CAD02714.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136499|gb|AAO68065.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 449

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 229/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   NT  E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRVQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|49475937|ref|YP_033978.1| exodeoxyribonuclease VII large subunit [Bartonella henselae str.
           Houston-1]
 gi|81827691|sp|Q6G2I3|EX7L_BARHE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|49238745|emb|CAF28004.1| Exodeoxyribonuclease large subunit [Bartonella henselae str.
           Houston-1]
          Length = 475

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 214/530 (40%), Positives = 311/530 (58%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           MN F +K  + +  E+SVSE++  LK +VE    +V VRGEISGYRG H+SGHAYF+LKD
Sbjct: 1   MNLFFEKTGATNVAEFSVSEIAGALKRVVEEKFGYVRVRGEISGYRGAHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T 
Sbjct: 61  DKARLEAVIWRGIMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK  EEGLF ++ K P+P++PKII V+TSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKFAEEGLFDEEKKKPLPYMPKIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A A+   N L      P+PD++I+ARGGGS+EDLW FNDE++VRA+  S
Sbjct: 181 RVQGETSGREVAAAVKGFNVLPLEGLIPKPDLLIVARGGGSLEDLWGFNDEVVVRAVYES 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           S+P+ISA+GHETDWTL DY AD RAPTPT AAE AVPVK  L+  +++L ARL   + R 
Sbjct: 241 SLPVISAVGHETDWTLIDYVADWRAPTPTAAAEKAVPVKIDLEVYVVSLGARLRTGLARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L ++++ALP +DQ  +  R   D +   LE  L +   +K  +F+ +  R   
Sbjct: 301 FDFHQQKLRAIIRALPTADQLFALPRRGFDEISSRLERALCVSCDKKRLYFHTLAIRFTP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K +    E    + +                                     
Sbjct: 361 RLL--NTEKAQHSAKEYTARLHRAFVH--------------------------------- 385

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + I  R+L+S +Y+N L+RG+      NN  I +   +
Sbjct: 386 --------------IVEKQRAQLEIAFRLLKSTSYQNILERGFVLALGQNNKPIKRLAQI 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
             K +I + FFDG+  +++  ++                + KQ  QG LF
Sbjct: 432 PEKEQINLRFFDGEI-SVITQESFFNR-----SSKSKRIKSKQDDQGTLF 475


>gi|82544958|ref|YP_408905.1| exodeoxyribonuclease VII large subunit [Shigella boydii Sb227]
 gi|123559008|sp|Q31XY1|EX7L_SHIBS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81246369|gb|ABB67077.1| exonuclease VII, large subunit [Shigella boydii Sb227]
          Length = 456

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             E LF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|192362513|ref|YP_001982570.1| exodeoxyribonuclease VII large subunit [Cellvibrio japonicus
           Ueda107]
 gi|190688678|gb|ACE86356.1| exodeoxyribonuclease VII, large subunit [Cellvibrio japonicus
           Ueda107]
          Length = 460

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 149/514 (28%), Positives = 244/514 (47%), Gaps = 65/514 (12%)

Query: 1   MNPFSQKN---------SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG 51
           M+P S ++         S +    SVS+L+   + ++E+    + V GE+S    I SSG
Sbjct: 1   MHPMSHQDLFTSTPAHFSPEREIISVSQLNRRARQLLETQFPLLWVEGELSNV-SIPSSG 59

Query: 52  HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           H YF+LKD+ +++   +++     + F P++G + L+  +++ + G   YQII+E +  +
Sbjct: 60  HWYFTLKDDQAQVRCAMFRNRNMLVRFKPQQGQQVLIRARVSLYEGRGDYQIIVEHMEEA 119

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171
           G+G L  A E+ K +L +EGLF   +K P+P +P  I VITSPTGA IRDIL  +  RFP
Sbjct: 120 GTGALQRAFEQLKARLGQEGLFDPAYKKPLPGLPGRIGVITSPTGAAIRDILSVLERRFP 179

Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            + V + PV VQG E   +I  A+   N           D++I+ARGGGS+EDLW FN+E
Sbjct: 180 AIPVTLIPVAVQGKEAAPQIVRALELANR------SGLFDVLIVARGGGSLEDLWPFNEE 233

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
           ++ RAI  S +P+IS +GHE D+T+AD+ ADLRAPTP+ AAE+ VP         I  E 
Sbjct: 234 IVARAIFASRVPVISGVGHEVDFTIADFVADLRAPTPSAAAELVVPDGNDWLDKFIGFEV 293

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
            L   ++R +++    L  L + L +  + L     RLD L   L+ +++  +       
Sbjct: 294 LLEEAMLRKLRHWQQRLTWLRQRLRHPRERLEQQGQRLDNLELRLKAHIQHQLGNYRHKL 353

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +  R++       I +  + + ++QQ +                              
Sbjct: 354 EQLRLRLQPHHPQVRIVRLHEKLAQQQQRL------------------------------ 383

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN- 469
             +      ++    R    L               R+L +    NTL+RGY+       
Sbjct: 384 --VSLQKQQLQGYKQRFNAAL---------------RLLNTLNPLNTLERGYSLTSHAES 426

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
              I+  + + T   +     +G+  + V    P
Sbjct: 427 GQLISSSKQIVTGELVKTRLAEGELISRVERTLP 460


>gi|229510708|ref|ZP_04400187.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae B33]
 gi|229608638|ref|YP_002879286.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae MJ-1236]
 gi|229350673|gb|EEO15614.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae B33]
 gi|229371293|gb|ACQ61716.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae MJ-1236]
          Length = 464

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/491 (29%), Positives = 241/491 (49%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    +   P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNIKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  + T    + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|303252815|ref|ZP_07338974.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302648245|gb|EFL78442.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
          Length = 486

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   +++ 
Sbjct: 2   NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL   G
Sbjct: 61  KNQRVIFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAASG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 121 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 473 LSQGEIVSEIIKIN 486


>gi|153216237|ref|ZP_01950337.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 1587]
 gi|124114382|gb|EAY33202.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 1587]
          Length = 446

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 244/496 (49%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             + ++   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLVNRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRITQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSTQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|193064750|ref|ZP_03045828.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E22]
 gi|194427279|ref|ZP_03059829.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B171]
 gi|260845139|ref|YP_003222917.1| exonuclease VII, large subunit XseA [Escherichia coli O103:H2 str.
           12009]
 gi|260856603|ref|YP_003230494.1| exonuclease VII, large subunit XseA [Escherichia coli O26:H11 str.
           11368]
 gi|192927633|gb|EDV82249.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E22]
 gi|194414600|gb|EDX30872.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B171]
 gi|257755252|dbj|BAI26754.1| exonuclease VII, large subunit XseA [Escherichia coli O26:H11 str.
           11368]
 gi|257760286|dbj|BAI31783.1| exonuclease VII, large subunit XseA [Escherichia coli O103:H2 str.
           12009]
 gi|323159379|gb|EFZ45364.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E128010]
          Length = 456

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +   AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|254225029|ref|ZP_04918643.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V51]
 gi|125622416|gb|EAZ50736.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V51]
          Length = 446

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + +  + + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQCRDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRITQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHKLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|148275|gb|AAA24766.1| exonuclease VII large subunit [Escherichia coli]
          Length = 456

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSSRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|262192493|ref|ZP_06050644.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae CT 5369-93]
 gi|262031652|gb|EEY50239.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae CT 5369-93]
          Length = 446

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/496 (29%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + I   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASSIRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++  I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEHRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|168261451|ref|ZP_02683424.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205349375|gb|EDZ36006.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 449

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|229525410|ref|ZP_04414815.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae bv.
           albensis VL426]
 gi|229338991|gb|EEO04008.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae bv.
           albensis VL426]
          Length = 464

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 57/491 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++K
Sbjct: 25  NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K +L  E
Sbjct: 84  GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189
           GLF+   K P+P  P+ + +ITS TGA + DIL  +  R   L V+I+P  VQG+E   +
Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDSNLPVVIYPTLVQGEEAAIQ 203

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH
Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  +      
Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + +LD L    E  ++  +  + + ++ + ++I+    IH I+
Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRFEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R ++++++Q I Q                                             
Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +      +++ +  L + +   TL RGY+  + T    + Q   +     ++ 
Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450

Query: 488 NFFDGQANAIV 498
              DG+  + V
Sbjct: 451 QLMDGEILSTV 461


>gi|148825322|ref|YP_001290075.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittEE]
 gi|148715482|gb|ABQ97692.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittEE]
          Length = 442

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E 
Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + + ++L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLALRLHNQHPQNQLRVQQAKNEQLTHRLQLAMLRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+++Q + + Q                                               
Sbjct: 355 RVQRHQQRLEQLQVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++      ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|168466742|ref|ZP_02700596.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195630784|gb|EDX49376.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 449

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIIGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|197250739|ref|YP_002147465.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|226697600|sp|B5F187|EX7L_SALA4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|197214442|gb|ACH51839.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 449

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRRIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|168238180|ref|ZP_02663238.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194736915|ref|YP_002115575.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|226697607|sp|B4TR85|EX7L_SALSV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194712417|gb|ACF91638.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288884|gb|EDY28257.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 449

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQQLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|269965176|ref|ZP_06179310.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 40B]
 gi|269830162|gb|EEZ84389.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 40B]
          Length = 496

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 58  TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 116

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 117 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 176

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K  +P  PK + VITS TGA + DIL  +  R P L V+I+P  VQG++   
Sbjct: 177 EGLFAQINKQSLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 236

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 237 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 290

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +     
Sbjct: 291 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 350

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L+  L   +    L     +LD L   L+  +   I  + +       R++ +  +  +
Sbjct: 351 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRVMSRFIALRQQRIERQHYRLQLNSPVTRL 410

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +Q +                                              
Sbjct: 411 SEQKSKLERVEQKL---------------------------------------------- 424

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  K+ +    ++I    L + +   TLKRGY+  Q      ITQ  ++ +   ++
Sbjct: 425 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 483

Query: 487 INFFDGQANAIV 498
               +G   + V
Sbjct: 484 TRLAEGDVRSTV 495


>gi|46143328|ref|ZP_00204443.1| COG1570: Exonuclease VII, large subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 486

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   ++++L+Y +++++E+ L  V + GEIS +     SGH Y +LKD ++++   ++  
Sbjct: 2   NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFTM 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P+ G++ LV   ++ +     YQIIIES+ P+G G L    E+ K KL  EG
Sbjct: 61  KNQRVTFRPQNGMQVLVPASVSLYDPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  IP   K + +ITS +GA ++DIL  +  R P L +II+P  VQG E  ++I
Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI  S IPIISA+GHE
Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   +L+    RL   K      L
Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  + +   + RL +    LE+ +      + +    ++ R+ +      +Q+
Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + +  + Q ++Q L     + K  +  +   R      +   +    +L  R++
Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F +  K+     +       +   +    L RGY+  Q +    +    NL   T+I   
Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472

Query: 489 FFDGQANAIVINKA 502
              G+  + +I   
Sbjct: 473 LSQGEIVSEIIKIN 486


>gi|153821384|ref|ZP_01974051.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae B33]
 gi|126521094|gb|EAZ78317.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae B33]
          Length = 446

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    +   P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNIKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|168232076|ref|ZP_02657134.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194471378|ref|ZP_03077362.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194457742|gb|EDX46581.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333639|gb|EDZ20403.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 449

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRIGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|331669255|ref|ZP_08370103.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA271]
 gi|331064449|gb|EGI36360.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA271]
          Length = 500

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/515 (28%), Positives = 238/515 (46%), Gaps = 57/515 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKR 519
           +     DG   + V N  P K +  +  +    +R
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKNRVKRCIKPARIQR 463


>gi|331648203|ref|ZP_08349293.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M605]
 gi|281179560|dbj|BAI55890.1| exonuclease VII large subunit [Escherichia coli SE15]
 gi|330912281|gb|EGH40791.1| exodeoxyribonuclease 7 large subunit [Escherichia coli AA86]
 gi|331043063|gb|EGI15203.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M605]
          Length = 455

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/507 (27%), Positives = 229/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFHPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVHQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      ++   K 
Sbjct: 429 LTTRLGDGVVVSEVSAVTKTRKPRKKT 455


>gi|262172164|ref|ZP_06039842.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus MB-451]
 gi|261893240|gb|EEY39226.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus MB-451]
          Length = 446

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N+  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASDIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                +   L   +    L   + +LD L   LE  +   +  + + ++ + ++I+ +  
Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLATQQQRWDRLSHKIQLNSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            H I++ R ++L+++Q + Q                                        
Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + H +      +++ +  + + +   TL RGY+  +      + Q   +   
Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|204929707|ref|ZP_03220781.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204321426|gb|EDZ06626.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 449

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQMIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIKLANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|313650995|gb|EFS15395.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2a str.
           2457T]
          Length = 456

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+  +G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQAAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             E LF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + + T   
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|145632644|ref|ZP_01788378.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           3655]
 gi|144986839|gb|EDJ93391.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           3655]
          Length = 442

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 238/494 (48%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+  ++ ++E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAVRQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E 
Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEDVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + + ++L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+++QH+ + Q                                               
Sbjct: 355 QVQRHQQHLEQLQVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++      ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|320196343|gb|EFW70967.1| Exodeoxyribonuclease VII large subunit [Escherichia coli WV_060327]
          Length = 458

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQLRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|238913649|ref|ZP_04657486.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 449

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/499 (29%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANVRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDNYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|323967954|gb|EGB63366.1| exodeoxyribonuclease VII [Escherichia coli M863]
 gi|327252212|gb|EGE63884.1| exodeoxyribonuclease VII, large subunit [Escherichia coli STEC_7v]
          Length = 455

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/507 (28%), Positives = 233/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q KNP+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVHSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +       T   L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      ++   K 
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKT 455


>gi|121601929|ref|YP_989310.1| exodeoxyribonuclease VII large subunit [Bartonella bacilliformis
           KC583]
 gi|189037838|sp|A1UTK7|EX7L_BARBK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|120614106|gb|ABM44707.1| exodeoxyribonuclease VII, large subunit [Bartonella bacilliformis
           KC583]
          Length = 476

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 210/527 (39%), Positives = 307/527 (58%), Gaps = 56/527 (10%)

Query: 4   FSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           F++K  + +  E+SVSE++  LK +VE    +V +RGEISGYRG H+SGHAYF+LKD+ +
Sbjct: 5   FTEKPVATNVAEFSVSEIANALKRVVEDKFGYVRIRGEISGYRGAHASGHAYFALKDDKA 64

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           R++A+IW   + K+ F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T LE 
Sbjct: 65  RLEAVIWLSVMKKLSFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTLLEN 124

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
           RKKKL EEGLF   +K P+P++PKII V+TSPTGAVIRDI+ RI  RFPL ++++PV+VQ
Sbjct: 125 RKKKLAEEGLFDAANKKPLPYMPKIIGVVTSPTGAVIRDIIHRIFDRFPLHILVWPVRVQ 184

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C +E+A+A+   N L  G   P+PD+II+ARGGGS+EDLW FNDE +VRA+  S+IP
Sbjct: 185 GETCGREVASAVEGFNALFLGGGIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYASAIP 244

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHETDWTL DYAAD RAPTPTGAAE AVPVK  ++  L ++ +R    + R   +
Sbjct: 245 VISAVGHETDWTLIDYAADWRAPTPTGAAERAVPVKLDIEVHLASINSRFRVGLARYFDF 304

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
               L +L++ LP  DQ  +  R   D +   L+  L +   +K  +F+ +  R     L
Sbjct: 305 HQQKLRALVRGLPTVDQLFALPRRGFDEISSRLQRALCVSYDKKCFYFHALSLRFSPRLL 364

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
             N +K +  I E    + +                                        
Sbjct: 365 --NTKKAQYAIQEYTGRLHR---------------------------------------- 382

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                       ++     V +  R+L+S +Y+N L+RG+      ++  I +   L   
Sbjct: 383 -------AFLRNVEKQRAQVEMACRLLKSTSYQNILERGFVLALGKDHKPIKRLMQLPET 435

Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            +I + FFDG+ +    ++A  +    K+ +   +       QG LF
Sbjct: 436 GQISLRFFDGEIDVSTHDRAVNRSLKNKRIKSQKD------DQGLLF 476


>gi|163802482|ref|ZP_02196375.1| exodeoxyribonuclease VII large subunit [Vibrio sp. AND4]
 gi|159173783|gb|EDP58598.1| exodeoxyribonuclease VII large subunit [Vibrio sp. AND4]
          Length = 443

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/494 (27%), Positives = 240/494 (48%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   
Sbjct: 3   SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E  K KL
Sbjct: 62  MFRGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+  +K  +P  P+ + VITS TGA + DIL  +  R P L V+++P  VQG++ 
Sbjct: 122 AAEGLFAQTNKQSLPEHPRRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA+S IPIISA
Sbjct: 182 AIQIAQAIGRANSRGE------CDVLIVGRGGGSLEDLWCFNNEILARTIASSQIPIISA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +   
Sbjct: 236 VGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKNQALVARQHKLASAMRYYLAQQKQQ 295

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             SL+  L   +    L     +LD L   L+  ++  I  + +      +R++ +  + 
Sbjct: 296 SASLMHRLERQHPSYQLQRQTQQLDELDMRLQRAMQGFITTRQQAVERKHHRLQLNSPVK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + + +  +   +Q                                              
Sbjct: 356 RLAEQKSKLDRVEQ---------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            ++   +  K+ +    ++I    L + +   TLKRGY+  Q      +TQ + + +   
Sbjct: 370 -KLMDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQIVTQAKEVKSGDV 428

Query: 485 ILINFFDGQANAIV 498
           ++    DG+  + V
Sbjct: 429 LVTRLSDGELRSTV 442


>gi|331684154|ref|ZP_08384750.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H299]
 gi|331079106|gb|EGI50308.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H299]
          Length = 458

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|326386127|ref|ZP_08207751.1| exodeoxyribonuclease VII large subunit [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209352|gb|EGD60145.1| exodeoxyribonuclease VII large subunit [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 493

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 186/523 (35%), Positives = 266/523 (50%), Gaps = 49/523 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
           +    + P  S+SELS  LK  VE     V VRGE+SG +   +SGH Y SLKD ++R+D
Sbjct: 19  EAAGDNAPALSISELSQLLKRTVEDRFGFVRVRGELSGVK-RAASGHLYLSLKDENARLD 77

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            ++W+G++ ++ F P +G+E +  GK+TT+PG S YQI+I+ +  +G G LL  LEK K 
Sbjct: 78  GVMWRGSVQRLGFQPADGVEVIATGKLTTYPGRSNYQIVIDRMEIAGEGALLALLEKTKA 137

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           +L  EGLF    K P+P++P++I V+TSPTGAVIRDIL R+  RFP  V+++PV VQG  
Sbjct: 138 RLAAEGLFDPARKRPLPYLPRVIGVVTSPTGAVIRDILHRLRDRFPSHVVVWPVLVQGQG 197

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              ++A A+   + L+ G    RPD++I+ARGGGSIEDLW FN+E +VRAIA S+IP+IS
Sbjct: 198 AASQVAAAVRGFSELEPGGPVARPDLVIVARGGGSIEDLWSFNEEEVVRAIAASTIPVIS 257

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TLAD+AAD RAPTPT AAEMAVPV+  L + L +LEAR    + R +     
Sbjct: 258 AVGHETDTTLADFAADRRAPTPTAAAEMAVPVRAELMAGLADLEARRQRALGRQLAQARE 317

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L+   + LP     LS    RLD L   L  +L                 +        
Sbjct: 318 RLDQRARRLPPPHALLSGQAQRLDDLGERLRRSLGHRTELAAAMLARHAGSL-------- 369

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                                           + A+L     + + R+  L    + L+ 
Sbjct: 370 --------------------------------RPALLETRLRRERERLLALRLRPEALLQ 397

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           RIE             V    R+ +S   +  L RGY  + D+    +  +   A +  +
Sbjct: 398 RIETA--------RGRVDALDRLRRSLDPEAPLARGYVLVTDSAGRVVKTRSAAAGEAEL 449

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            + F DG    +         +PT +             Q +L
Sbjct: 450 TLKFADGSLGVVPAGAGSTGGEPTPRPARAKTPPSTGDRQPKL 492


>gi|126725606|ref|ZP_01741448.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126704810|gb|EBA03901.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium
           HTCC2150]
          Length = 510

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 196/532 (36%), Positives = 285/532 (53%), Gaps = 25/532 (4%)

Query: 1   MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE++V+E+S  +K  +E + S V VR E+ G      SGH Y  LK
Sbjct: 1   MSDLIDDPQEGENAPEFTVTEISGAVKRTIEGSFSRVRVRAEL-GRVSRPRSGHVYLDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +  +IWKG  +++   PEEG+E +  G++TTF G SKYQ++IE L P+G G L+ 
Sbjct: 60  DDKSVLSGVIWKGVASRLATQPEEGLEVVATGRLTTFGGQSKYQMVIEDLAPAGMGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRK+    EGLF    K P+P++P++I V+TSP+GAVIRDIL R+  RFP RV+I+P
Sbjct: 120 MLEKRKQAFAAEGLFDASRKQPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRRVLIWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG +C  E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E +VRA A 
Sbjct: 180 VAVQGQKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEAVVRAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+  L S +  L AR    + +
Sbjct: 240 SDIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEAAVPVRMELMSVIDELGARSGRALRQ 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I  + +    L + LP  +Q +  +R RLD L   L   L  +  R+    + I   ++
Sbjct: 300 GIMQRRDRARDLARILPKPEQLVENARQRLDTLSDRLPKALASVRQRRQVALSRISGGLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   ++  R+   +  + +   + +    +  E +                      
Sbjct: 360 PTTLQRRLEAERRRSDDLARRLGPALVRGRDRLVQENRR------------------SRE 401

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
           ++  +  R +   + +I    T++S   R+ Q+  YK TLKRGY  ++      ITQ+  
Sbjct: 402 NLDVVFARFQRAANSQISDWKTALSGAERMRQTLGYKETLKRGYAVVRGA-GQVITQREE 460

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPT-KKCQLHNNKREKQGTQGELF 529
            A    + I F DG+ N  V      ++  T          +     QG LF
Sbjct: 461 AAKHHALEIEFHDGRVN--VGETQTAEKTATVTPVMKPKKPKPTDKDQGSLF 510


>gi|322613746|gb|EFY10685.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619511|gb|EFY16387.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625016|gb|EFY21845.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629541|gb|EFY26317.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634028|gb|EFY30765.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635534|gb|EFY32245.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639891|gb|EFY36568.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644413|gb|EFY40954.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649134|gb|EFY45574.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655223|gb|EFY51532.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658270|gb|EFY54536.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664271|gb|EFY60468.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669438|gb|EFY65587.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673165|gb|EFY69271.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676557|gb|EFY72625.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683307|gb|EFY79321.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685807|gb|EFY81800.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192517|gb|EFZ77746.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199562|gb|EFZ84653.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204663|gb|EFZ89661.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208111|gb|EFZ93056.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210165|gb|EFZ95066.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217032|gb|EGA01754.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219227|gb|EGA03723.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225452|gb|EGA09683.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229279|gb|EGA13403.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235406|gb|EGA19490.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237408|gb|EGA21471.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245162|gb|EGA29163.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248865|gb|EGA32791.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253153|gb|EGA36985.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255386|gb|EGA39154.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260590|gb|EGA44200.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266366|gb|EGA49854.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269803|gb|EGA53253.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 449

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GE+S +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGELSNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|254450924|ref|ZP_05064361.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus
           238]
 gi|198265330|gb|EDY89600.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus
           238]
          Length = 515

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/530 (32%), Positives = 266/530 (50%), Gaps = 18/530 (3%)

Query: 1   MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+   +  +  + PE++V+ELS  +K  +E    HV V+ E+ G      SGH YF LKD
Sbjct: 3   MDLTDEPEAAGNTPEFTVTELSGAVKRAIEGEFGHVRVKAEV-GRVVHARSGHLYFDLKD 61

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + + +    WKG +  +  +PEEG+E +V G++TTF   SKYQ+    +  +G G L+  
Sbjct: 62  DRNVLACTTWKGQVADLSVIPEEGMEVVVKGRMTTFGSQSKYQLNATEVAVAGVGALMAM 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           L++RKK L  EGLF+ + K  +PF+P +I VITSPTGAV+RDIL R+  RFP +VI++PV
Sbjct: 122 LDQRKKALEAEGLFAAERKQALPFLPDVIGVITSPTGAVVRDILHRLRDRFPRKVIVWPV 181

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C  ++A AI   N +  G   PRPD+II+ARGGGSIEDLW FN+E++ RA A S
Sbjct: 182 AVQGKDCAPQVARAIDGFNAMTSGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAAS 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISAIGHETD TL D+ +D RAPTP+ AAEMAVPV+  L +++  + AR    +   
Sbjct: 242 TIPLISAIGHETDTTLIDFVSDQRAPTPSAAAEMAVPVRLELMAAVDQMGARATRAVTDG 301

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   +  L + LP   Q    ++ R D    +L+  L   +             ++ 
Sbjct: 302 VARRKQRVADLARVLPKPKQLTEDAKQRFDYWSEKLDVALIGRVAAGRLRLGDASGLLRP 361

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L + +   R+ +      +   + +       +   +   L    E            
Sbjct: 362 SVLGNRLTLGRERMSGLNARLGPALGRMAAQARRDLDGQARRL--RPETIAVAQTRAVKD 419

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +   + R+      + +   + +    R+ ++  Y+ TLKRGY  ++  +   +T  +  
Sbjct: 420 LAATLRRMTTAAHTQTQKQRSRLEALDRMRETLGYRETLKRGYAVVRG-DGVVVTTAKAA 478

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                + I F DG                          +     QG LF
Sbjct: 479 KAALTLDIEFADGTM-------------APTSKLAKPKGKMPPPDQGSLF 515


>gi|320180499|gb|EFW55430.1| Exodeoxyribonuclease VII large subunit [Shigella boydii ATCC 9905]
          Length = 456

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L  II+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGATLHDILHVLKRRDPSLPAIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|261252186|ref|ZP_05944759.1| exodeoxyribonuclease VII large subunit [Vibrio orientalis CIP
           102891]
 gi|260935577|gb|EEX91566.1| exodeoxyribonuclease VII large subunit [Vibrio orientalis CIP
           102891]
          Length = 443

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/495 (27%), Positives = 239/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++  
Sbjct: 2   SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    E+ K K
Sbjct: 61  AMFRGNNRRVTFKPKNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K P+P  PK + VITS TGA + DIL  +  R P L V+++P  VQG+E
Sbjct: 121 LAGEGLFAQTSKKPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ AD+RAPTP+ AAE+      H   +L++ + +L + +   +  +  
Sbjct: 235 AVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALLSRQNKLVSAMRYYLSEQKR 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               LL  L   +    L     +LD L   L  ++E  + ++ +       R++ +  +
Sbjct: 295 HNALLLHRLERQHPSYQLQRQSQQLDELEVRLHRSMERYLSQRSQKVERQQYRLELNSPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + +  +   +Q +   +                                       
Sbjct: 355 KRLSEQKSTLQRLEQKLLDAM--------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     ++ +    +++    L + +   TLKRGY+  Q      +T+  ++ T  
Sbjct: 376 --------DRRLLNTRHQLALAAEKLDTVSPLATLKRGYSISQTEQGKVLTKTSDIKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLSDGEIRSTV 442


>gi|145628760|ref|ZP_01784560.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           22.1-21]
 gi|144979230|gb|EDJ88916.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           22.1-21]
          Length = 442

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/494 (29%), Positives = 237/494 (47%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + I+E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDKNAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+VII+P  VQG E 
Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVIIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + + ++L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLALRLQNQHPQNQLRAQQAKNEQLAHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            IQ+++QH+ + Q                                               
Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++      ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|260869198|ref|YP_003235600.1| exonuclease VII, large subunit XseA [Escherichia coli O111:H- str.
           11128]
 gi|257765554|dbj|BAI37049.1| exonuclease VII, large subunit XseA [Escherichia coli O111:H- str.
           11128]
 gi|323177367|gb|EFZ62955.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1180]
          Length = 456

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +   AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRL 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|254563195|ref|YP_003070290.1| exonuclease VII, large subunit OB-fold nucleic acid binding domain
           [Methylobacterium extorquens DM4]
 gi|254270473|emb|CAX26473.1| putative exonuclease VII, large subunit OB-fold nucleic acid
           binding domain [Methylobacterium extorquens DM4]
          Length = 522

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 202/549 (36%), Positives = 287/549 (52%), Gaps = 68/549 (12%)

Query: 2   NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            P        + PE+SV +L+  LK  +E    HV +RGEI+GYRG H SGHAYFSLKD 
Sbjct: 21  EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++IDA++WKG L ++   P+EG+E +  GKITTF G S YQI+I+S+ P+G G  +  L
Sbjct: 81  SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K PIPF+P++I V+TSPTGAVIRDIL R+  RFP  V+++PV+
Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   +EIA AI   N L      PRPD++I+ARGGGSIEDLW FN+E +VRA A S 
Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+  L + +  L AR    ++R I
Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +     +L++A+P +D  L+  R RLD                       + +     
Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L  N + +R+ +      + +      R   +   E  A L  +  + +  +  +    
Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +   T +L + +YK  L RGY  ++D +   +      A
Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453

Query: 481 TKTRILINFFDGQANAIVIN-----------KAPPKEQPTKKCQLHNNKREKQGT----- 524
              R  + F DG   A                APP  +P +  +    +   +       
Sbjct: 454 QAARFQLQFADGALFARPEEAPDDPVAPPVADAPPSPRPKRAPRRAAPEPAPKPEKVTAE 513

Query: 525 ----QGELF 529
               QG LF
Sbjct: 514 PAARQGSLF 522


>gi|148827599|ref|YP_001292352.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittGG]
 gi|148718841|gb|ABQ99968.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittGG]
          Length = 442

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E 
Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + +  +L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLTLRLHNQHPQNQLRVQQAKNAQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            IQ+++QH+ + Q                                               
Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++      ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|56412606|ref|YP_149681.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361541|ref|YP_002141177.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|81821470|sp|Q5PI54|EX7L_SALPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697606|sp|B5BAZ3|EX7L_SALPK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|56126863|gb|AAV76369.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093017|emb|CAR58453.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 449

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|200386969|ref|ZP_03213581.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199604067|gb|EDZ02612.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 449

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + R I  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARTIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|258619963|ref|ZP_05715003.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM573]
 gi|258587696|gb|EEW12405.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM573]
          Length = 446

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 LLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N+  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASDIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                +   L   +    L   + +LD L   LE  +   +  + + +  + ++I+ +  
Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKIHQRLATQQQRWERLSHKIQLNSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            H I++ R ++L+++Q + Q                                        
Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + H +      +++ +  + + +   TL RGY+  +      + Q   +   
Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|254506777|ref|ZP_05118917.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           16]
 gi|219550358|gb|EED27343.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           16]
          Length = 443

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 139/495 (28%), Positives = 236/495 (47%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++  
Sbjct: 2   SSLTNQNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    ++ K K
Sbjct: 61  AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDELKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+  +K P+P  PK + ++TS TGA + DIL  +  R P L V+I+P  VQG+E
Sbjct: 121 LAGEGLFAQTNKQPLPEHPKCVGIVTSKTGAALFDILDVLKRRDPSLPVVIYPTMVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ AD+RAPTP+ AAE+      H    + + + +L + +   +     
Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKDQVITSHQHKLASAMRHYLSQHKQ 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           T  SLL  L   +    L     +LD L   L+  +E  +  + +      ++++    I
Sbjct: 295 TNASLLHRLEKQHPRHQLQRQSQQLDDLDMRLQRGMERYLSGRAQKIERQQHKLQLHSPI 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + +    +   +Q +   +                                       
Sbjct: 355 KRLNEQASSLQRLEQKLLDAM--------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     K+ +    +++    L +     TLKRGY+  Q+   + IT+     T  
Sbjct: 376 --------DRKLLNTRHQLALAAEKLDTVNPLATLKRGYSITQNQQGDVITKASQTKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLSDGEIRSTV 442


>gi|197334825|ref|YP_002155393.1| exodeoxyribonuclease VII, large subunit [Vibrio fischeri MJ11]
 gi|226697620|sp|B5FAX9|EX7L_VIBFM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|197316315|gb|ACH65762.1| exodeoxyribonuclease VII, large subunit [Vibrio fischeri MJ11]
          Length = 449

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 57/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS       SGH Y +LKD+ +++   ++
Sbjct: 5   SNPRIFTVSRLNAEVRLLLENEMGIVWLVGEISNLTV-PVSGHWYLTLKDSQAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    ++ K  L  
Sbjct: 64  KGNNRRVTFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFDQLKMSLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  PK + +ITS TGA + DIL  +  R P L V+I+P  VQG     
Sbjct: 124 EGLFAQTAKKTLPEQPKRVGIITSQTGAALFDILHVLKRRDPNLPVVIYPTMVQGSGAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G
Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASEIPIVSAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+          ++ + + RLN+ + R + ++  +L+
Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSAQLQTVAHQKRRLNSAMERYLSHQQRSLS 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +    +   +    L+    RLD L + L ++++  + R+     ++  R+ +      I
Sbjct: 298 AYQHRIEKQHPQMQLNNQSQRLDDLNQRLMNHIQQRLQRQQYRVENLTLRLNNLSPTKRI 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +++ HI E ++ +                                              
Sbjct: 358 SQDKLHIEELKRRLL--------------------------------------------- 372

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +   +      +++    L + +   TL RGY+   + +   IT  + +     I 
Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLMRGYSITHNQDGKVITSTKQVELGDNIT 430

Query: 487 INFFDGQANAIVINKA 502
             F DG   + V   +
Sbjct: 431 TRFADGDITSTVTKAS 446


>gi|194445807|ref|YP_002041771.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|226697605|sp|B4T0N9|EX7L_SALNS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194404470|gb|ACF64692.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 449

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    T+   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|258541125|ref|YP_003186558.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256632203|dbj|BAH98178.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635260|dbj|BAI01229.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638315|dbj|BAI04277.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641369|dbj|BAI07324.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644424|dbj|BAI10372.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647479|dbj|BAI13420.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650532|dbj|BAI16466.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653523|dbj|BAI19450.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 484

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 165/502 (32%), Positives = 260/502 (51%), Gaps = 30/502 (5%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              S + PE++VSE+S  ++  +E   S V VRGEI+  +    SGH YFSLKD   +I 
Sbjct: 8   PSASNNVPEFTVSEISGAIRRTLEGTFSRVRVRGEITELKRYP-SGHVYFSLKDERGKIS 66

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            ++W+G+++++   PE G+E +  GKI+ +   S YQ+++E +  +G G LL  +E+ + 
Sbjct: 67  GVVWRGSVSRLGLAPENGVEIIATGKISAYGERSSYQLVVERMEYAGEGALLARIERLRI 126

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           +L EEGLF    K  IP +P++I V+TSP GAV+ DI   +  RFP  VI++PV VQG+ 
Sbjct: 127 RLAEEGLFDTACKKAIPLLPRVIGVVTSPQGAVLHDICTTLQRRFPRPVIVWPVPVQGEG 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               IA AI   + L      PRPD++I+ARGGGS+EDL  FNDE +VRA A  +IP+IS
Sbjct: 187 AAARIAAAIDGFSQLDGQGAVPRPDVLIVARGGGSLEDLMAFNDEAVVRAAAACTIPLIS 246

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+A+D RAPTPT AAEMAVPV+  L + + +  AR    + RL++    
Sbjct: 247 AVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLADIEHRNARALGALSRLLQTARL 306

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L+    A+P+    L  +R +LD   R L+  L  ++ R+      I   + +      
Sbjct: 307 RLDRASSAMPDLPSLLQTARMQLDDRGRRLDVALPALVQRRKADLVAIERHMPAV----- 361

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                  +  ++  +  +       +    +++ A L  LR                   
Sbjct: 362 ----ETLLAGRRTRLAVLANMLQASMAHTFQKQDARLGRLRISPAP-------------- 403

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L   ++   T+++     L++ + +  L RGY  +       +T    L    R+
Sbjct: 404 -----LQALVRERRTALAGIAGQLEAVSPRAVLARGYALVT-AEGRPVTSAEQLRDGERV 457

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            + F DG   A++ +     +Q
Sbjct: 458 ELTFGDGARPAVIGDGTRQPKQ 479


>gi|218701016|ref|YP_002408645.1| exodeoxyribonuclease VII large subunit [Escherichia coli IAI39]
 gi|226694649|sp|B7NQV5|EX7L_ECO7I RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218371002|emb|CAR18830.1| exonuclease VII, large subunit [Escherichia coli IAI39]
          Length = 455

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/507 (28%), Positives = 230/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      ++   K 
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455


>gi|301169099|emb|CBW28696.1| exonuclease VII, large subunit [Haemophilus influenzae 10810]
          Length = 439

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E N   + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  + +R+K + L + I
Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSSRLKQNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVKQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|91211832|ref|YP_541818.1| exodeoxyribonuclease VII large subunit [Escherichia coli UTI89]
 gi|117624736|ref|YP_853649.1| exodeoxyribonuclease VII large subunit [Escherichia coli APEC O1]
 gi|218559433|ref|YP_002392346.1| exodeoxyribonuclease VII large subunit [Escherichia coli S88]
 gi|237705016|ref|ZP_04535497.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 3_2_53FAA]
 gi|122422914|sp|Q1R8M7|EX7L_ECOUT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158512548|sp|A1AE45|EX7L_ECOK1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694647|sp|B7MHZ0|EX7L_ECO45 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|91073406|gb|ABE08287.1| exodeoxyribonuclease VII large subunit [Escherichia coli UTI89]
 gi|115513860|gb|ABJ01935.1| exodeoxyribonuclease VII large subunit [Escherichia coli APEC O1]
 gi|218366202|emb|CAR03948.1| exonuclease VII, large subunit [Escherichia coli S88]
 gi|226901382|gb|EEH87641.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 3_2_53FAA]
 gi|294489850|gb|ADE88606.1| exodeoxyribonuclease VII, large subunit [Escherichia coli IHE3034]
 gi|307625938|gb|ADN70242.1| exodeoxyribonuclease VII large subunit [Escherichia coli UM146]
 gi|315288086|gb|EFU47486.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 110-3]
 gi|323949166|gb|EGB45057.1| exodeoxyribonuclease VII [Escherichia coli H252]
 gi|323955747|gb|EGB51505.1| exodeoxyribonuclease VII [Escherichia coli H263]
          Length = 458

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQLKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALESQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|147675003|ref|YP_001216251.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae O395]
 gi|262168786|ref|ZP_06036481.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC27]
 gi|172047437|sp|A5F3E9|EX7L_VIBC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|146316886|gb|ABQ21425.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O395]
 gi|227012590|gb|ACP08800.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O395]
 gi|262022904|gb|EEY41610.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC27]
          Length = 446

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + + ++ + ++I+    
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +    L RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLAALARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|240850521|ref|YP_002971920.1| exodeoxyribonuclease VII large subunit [Bartonella grahamii as4aup]
 gi|240267644|gb|ACS51232.1| exodeoxyribonuclease VII large subunit [Bartonella grahamii as4aup]
          Length = 476

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 208/530 (39%), Positives = 305/530 (57%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           ++ FS+K    +  E++VSE++  LK +VE    +V VRGEISGYRG H+SGHAYF+LKD
Sbjct: 2   VSLFSEKTGVTNVAEFTVSEIAGALKRVVEEKFGYVRVRGEISGYRGTHASGHAYFALKD 61

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T 
Sbjct: 62  DKARLEAVIWRGVMEKLKFPPEEGMEVVAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK +EEGLF +  K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 122 LENRKKKFVEEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 181

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A A+   N L  G   P+PD+II+ARGGGS+EDLW FNDE +VRA+  S
Sbjct: 182 RVQGETSGREVAVAVEGFNALAPGGFIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYAS 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           ++P+ISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L+  + +L ARL   ++R 
Sbjct: 242 ALPVISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKLDLEVCVASLGARLRKGLVRS 301

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L +  + LP  DQ  +  R   D +   L+  L +   +K   F     R++ 
Sbjct: 302 FDFHQQKLRAARRGLPTVDQLFALPRRGFDEISNRLQRALCVSYDKKCFSF--HTLRLRL 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              + N +K +++  E    + +                                     
Sbjct: 360 SLRLLNSEKAQRNTKEYTARLHR------------------------------------- 382

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + +  R+L+S +Y+N L+RG+      +N  I +    
Sbjct: 383 ----------AFVRSVEKQRAQMELAFRLLKSTSYQNILERGFVLALGQDNKPIKRLIQF 432

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG  +  +      K    K+ +L          QG LF
Sbjct: 433 PDTGQISLRFFDGDISVAIQEPVFSKRSKHKQIKL------PSDDQGTLF 476


>gi|325496461|gb|EGC94320.1| exodeoxyribonuclease VII large subunit [Escherichia fergusonii
           ECD227]
          Length = 455

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRASITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q KNP+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +       T   L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V      ++   K
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454


>gi|324113000|gb|EGC06976.1| exodeoxyribonuclease VII [Escherichia fergusonii B253]
          Length = 455

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q KNP+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +       T   L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V      ++   K
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454


>gi|89055791|ref|YP_511242.1| exodeoxyribonuclease VII large subunit [Jannaschia sp. CCS1]
 gi|88865340|gb|ABD56217.1| Exodeoxyribonuclease VII large subunit [Jannaschia sp. CCS1]
          Length = 519

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 193/528 (36%), Positives = 290/528 (54%), Gaps = 11/528 (2%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +    + + + PE++VSE+S  +K  VE   +HV VRGE+ G   +  SGH Y  LKD+ 
Sbjct: 3   DLIDDEGTGNSPEFTVSEISGAVKRTVEGAFAHVRVRGEV-GRLSLPRSGHIYLDLKDDR 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S + +++WKG  N++   PEEG+E +  G++TTFPG SKYQ++I+ L P+G+G L+  LE
Sbjct: 62  SVLASVVWKGVANRLTHRPEEGMEVIATGRLTTFPGQSKYQLVIDDLQPAGAGALMAMLE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           KR+K L  EGLF D  K P+PF+P++I V+TSP+GAVIRDIL R+  RFP +V+I+PV V
Sbjct: 122 KRRKALAAEGLFDDARKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVAV 181

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG +C  ++ANAI   N L  G   PRPD++I+ARGGGS+EDLW FN+E +VRA A+S+I
Sbjct: 182 QGAKCGPDVANAIRGFNALTPGGALPRPDLLIVARGGGSLEDLWGFNEEEVVRATADSTI 241

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL DYA+D RAPTPTGAAE AVPV+  + + L   E  L   +   + 
Sbjct: 242 PLISAVGHETDTTLIDYASDYRAPTPTGAAEKAVPVRMDMLNWLRQQEGILTRAMTGALT 301

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   L  L +ALP SD  +  +R RLD     L   L           + +  R+    
Sbjct: 302 MRAQRLADLSRALPRSDALMEPARQRLDLAGLRLAPALASRTKDARAQLDRLAARLDP-A 360

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   + + R  + E+   +      ++        +++ +  +  ++   R   +   + 
Sbjct: 361 LDRAVARKRLALGERAAGLTPARLANVVRQGRRDLDRLTV-RLDPQRLTARTSKMEERLG 419

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +   R     +  ++    ++    R+ ++  Y  TL RGY  I+   +  +T K   + 
Sbjct: 420 QARARFAQAANLSVRKRREALDSLDRLRRTLGYTETLGRGYAVIRAGED-VLTSKAAASA 478

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + I F DG+               T K      K +    QG LF
Sbjct: 479 HAAMEIQFSDGRLGVTPTG-------ATPKAVKKAPKAKLPKDQGSLF 519


>gi|59711243|ref|YP_204019.1| exodeoxyribonuclease VII large subunit [Vibrio fischeri ES114]
 gi|81311004|sp|Q5E765|EX7L_VIBF1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|59479344|gb|AAW85131.1| exonuclease VII, large subunit [Vibrio fischeri ES114]
          Length = 449

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/496 (27%), Positives = 238/496 (47%), Gaps = 57/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS       SGH Y +LKD+ +++   ++
Sbjct: 5   SNPRIFTVSRLNAEVRLLLENEMGIVWLVGEISNLTV-PVSGHWYLTLKDSQAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    ++ K  L  
Sbjct: 64  KGNNRRVNFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFDQLKMSLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  PK + +ITS TGA + DIL  +  R P L ++I+P  VQG     
Sbjct: 124 EGLFAQTAKKSLPEQPKRVGIITSQTGAALFDILHVLKRRDPNLPIVIYPTMVQGSGAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G
Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASEIPIVSAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+          ++ + + RLN+ + R + ++  +L+
Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSAQLQTVAHQKRRLNSAMERYLSHQQRSLS 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +    +   +    L+    RLD L + L ++++  + R+     ++  R+ +      I
Sbjct: 298 AYQHRIEKQHPQMQLNNQSQRLDDLNQRLMNHIQQRLQRQQYRVENLTLRLNNLSPTKRI 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +++ HI E ++ +                                              
Sbjct: 358 SQDKLHIEELKRRLL--------------------------------------------- 372

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +   +      +++    L + +   TL RGY+   + +   IT  + +     I 
Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLMRGYSITHNQDGKIITSTKQVELGDNIT 430

Query: 487 INFFDGQANAIVINKA 502
             F DG   + V   +
Sbjct: 431 TRFADGDITSTVTKAS 446


>gi|91225132|ref|ZP_01260354.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 12G01]
 gi|91190075|gb|EAS76346.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 12G01]
          Length = 443

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 5   TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 64  RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+I+P  VQG++   
Sbjct: 124 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 184 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +     
Sbjct: 238 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L+  L   +    L     +LD L   L+  +   I  + +       R++ +  +  +
Sbjct: 298 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +Q +                                              
Sbjct: 358 AEQKSKLERVEQKL---------------------------------------------- 371

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  K+ +    ++I    L + +   TLKRGY+  Q      ITQ  ++ +   ++
Sbjct: 372 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 430

Query: 487 INFFDGQANAIV 498
               +G   + V
Sbjct: 431 TRLAEGDVRSTV 442


>gi|315300488|gb|EFU59717.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 16-3]
          Length = 458

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/510 (27%), Positives = 230/510 (45%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           ++    DG   + V      ++   K    
Sbjct: 429 LITRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|229844440|ref|ZP_04464580.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           6P18H1]
 gi|229812689|gb|EEP48378.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           6P18H1]
          Length = 439

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           + +  YSVS+L+   + I+E N   + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSNNIYSVSQLNSAARQILEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + +
Sbjct: 294 QLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAMLRQFENTQQKFTALSVRLKQNPLPYQV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++Q + + +                                                 
Sbjct: 354 QRHQQRLEQLKVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVKQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|262395111|ref|YP_003286965.1| exodeoxyribonuclease VII large subunit [Vibrio sp. Ex25]
 gi|262338705|gb|ACY52500.1| exodeoxyribonuclease VII large subunit [Vibrio sp. Ex25]
          Length = 443

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 5   TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 64  RGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + VITS TGA + DIL  +  R P L V+I+P  VQG++   
Sbjct: 124 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 184 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +     
Sbjct: 238 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L+  L   +    L     +LD L   L+  +   I  + +       R++ +  +  +
Sbjct: 298 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + +  +   +Q +                                              
Sbjct: 358 AEQKSKLERVEQKL---------------------------------------------- 371

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  K+ +    ++I    L + +   TLKRGY+  Q      ITQ  ++ +   ++
Sbjct: 372 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 430

Query: 487 INFFDGQANAIV 498
               +G   + V
Sbjct: 431 TRLAEGDVRSTV 442


>gi|319403786|emb|CBI77370.1| exodeoxyribonuclease VII large subunit [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 477

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 208/530 (39%), Positives = 303/530 (57%), Gaps = 54/530 (10%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F +K+ + +  E+SVSE++  LK IVE    +V VRGEISGYRG+H+SGHAYF+LKD
Sbjct: 1   MDLFLEKSVATNAAEFSVSEIAGALKRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII+SL P+G G L+T 
Sbjct: 61  DKARLEAVIWRGVIEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDSLEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK  +EGLF +  K  +P++P++I V+TSPTGAVIRDI+ RIS RFPL + ++PV
Sbjct: 121 LENRKKKFADEGLFDEAKKKKLPYMPRVIGVVTSPTGAVIRDIIHRISDRFPLHIFVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   N L       +PD+II+ARGGGS+EDLW FNDE +VRA++ S
Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLESAISKPDLIIVARGGGSLEDLWGFNDEAVVRAVSVS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L++ L +L  R      R 
Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKFDLETHLASLSLRFRVGAARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L+++++ LP +DQ  +  R   D +   L+  L +   +K  +F  ++ R+  
Sbjct: 301 FSFYKQKLSTVVRGLPTADQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLSP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K +Q+  E    +                                       
Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFL---------------------------------- 384

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + +  R+L+S +Y++ L+RG+       N  I +    
Sbjct: 385 -------------RNVEKKRAQIKMAFRLLKSTSYQSILERGFVLALGQENKPIKRLAQF 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG+ N    N        +        K+ +   QG LF
Sbjct: 432 PKTGQISLRFFDGEINVSTCN----SVSKSVPKPKKRLKQWQDDDQGTLF 477


>gi|300940244|ref|ZP_07154842.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 21-1]
 gi|300454940|gb|EFK18433.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 21-1]
          Length = 455

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 142/507 (28%), Positives = 229/507 (45%), Gaps = 57/507 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           +     DG   + V      ++   K 
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455


>gi|161612734|ref|YP_001586699.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|189037842|sp|A9N216|EX7L_SALPB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|161362098|gb|ABX65866.1| hypothetical protein SPAB_00433 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 449

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  + IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIIGRGGGSLEDLWSFNDERVARAIFANRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|309972444|gb|ADO95645.1| Exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           R2846]
          Length = 439

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E N S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGNFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + +  +L   L+  +        + F  + +R+K + L + +
Sbjct: 294 QLTLRLYNQHPQNQLRAQQAKNAQLTHRLQLAMLRQFENTQQKFTALSSRLKQNPLPYRV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++Q + + Q                                                 
Sbjct: 354 QRHQQRLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDLIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIMSKV 438


>gi|145636335|ref|ZP_01792004.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittHH]
 gi|145270500|gb|EDK10434.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittHH]
          Length = 442

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 144/494 (29%), Positives = 238/494 (48%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + I+E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E 
Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L+  L   +    L   + + ++L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLILRLQNQHPQNQLRAQQAKNEQLAHRLQLAMLRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            IQ+++QH+ + Q                                               
Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++      ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENLQGKAIVSVKDVNQGDL 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|110642671|ref|YP_670401.1| exodeoxyribonuclease VII large subunit [Escherichia coli 536]
 gi|300998062|ref|ZP_07181922.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 200-1]
 gi|123343752|sp|Q0TEX9|EX7L_ECOL5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110344263|gb|ABG70500.1| exodeoxyribonuclease VII large subunit [Escherichia coli 536]
 gi|300304041|gb|EFJ58561.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 200-1]
 gi|324011222|gb|EGB80441.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 60-1]
          Length = 458

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/510 (27%), Positives = 230/510 (45%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGALLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|218548057|ref|YP_002381848.1| exodeoxyribonuclease VII large subunit [Escherichia fergusonii ATCC
           35469]
 gi|226696187|sp|B7LKD2|EX7L_ESCF3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218355598|emb|CAQ88209.1| exonuclease VII, large subunit [Escherichia fergusonii ATCC 35469]
          Length = 455

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/506 (27%), Positives = 230/506 (45%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQLKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + R I  S IP++SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARGIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTLRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  + + +  + +                                          
Sbjct: 356 KIHRAQTRVQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +       T   L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----NLRAQLSAMRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V      ++   K
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454


>gi|323977312|gb|EGB72398.1| exodeoxyribonuclease VII [Escherichia coli TW10509]
          Length = 455

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q KNP+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +       T   L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V      ++   +
Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKR 454


>gi|167549470|ref|ZP_02343229.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205325347|gb|EDZ13186.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 449

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 144/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPVGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQHKQPLPSPAHGVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  I +  +    +  R+       
Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +                                               
Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  ++             L++ +   TL RGYT    TN   + + + +     
Sbjct: 371 --MTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428

Query: 485 ILINFFDGQANAIVINKAP 503
           +     DG   + V +  P
Sbjct: 429 MTTRLEDGWLESEVKSVTP 447


>gi|229846484|ref|ZP_04466592.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           7P49H1]
 gi|229810577|gb|EEP46295.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           7P49H1]
          Length = 442

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + I+E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSATRQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E 
Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGLITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA
Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   
Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + + ++L   L+  +        + F  +  R+K + L +
Sbjct: 295 LKQLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            IQ+ +Q + + +                                               
Sbjct: 355 RIQRYQQGLEQLKVR--------------------------------------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F ++ ++  C   ++     L   +    L RGY+  ++     I   +++     
Sbjct: 370 --LNFCVNRQVTECQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427

Query: 485 ILINFFDGQANAIV 498
           I     DG+  + V
Sbjct: 428 ITTQVADGKIVSKV 441


>gi|269103268|ref|ZP_06155965.1| exodeoxyribonuclease VII large subunit [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163166|gb|EEZ41662.1| exodeoxyribonuclease VII large subunit [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 448

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/501 (27%), Positives = 237/501 (47%), Gaps = 57/501 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F+Q    ++  ++VS L+  ++ ++E+ +  V + GE+S +  +  SGH YF+LKD 
Sbjct: 1   MTMFAQPTQSNNRIFTVSTLNAQVRVLLENEMGIVWLVGELSNF-SMPVSGHWYFTLKDA 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 60  RAQVKCAMFKGNNRRVLFKPSNGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K P+P  PK + +ITS TGA + DIL  +  R P L ++I+P 
Sbjct: 120 EQLKMSLAAEGLFAQSIKKPLPEQPKRVGIITSKTGAALFDILNVLRRRDPGLPIVIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     IA AI + N+ KE       D++I+ RGGGS+EDLW FN+E++ R I  S
Sbjct: 180 MVQGEGSAISIAQAIGRANSRKE------CDVLIVGRGGGSLEDLWAFNEEIVARTIVAS 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H   ++   + +LN+ +   
Sbjct: 234 EIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQAITQKKQQLNHAMRYY 293

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           I  +      L   L   +    L+  +  LD L   L   ++  + +  +    I  ++
Sbjct: 294 IAKQQQQTQRLQHRLERQHPQMRLNQQQQHLDELTGHLHQAMQRKLTQADQRVERINYKL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   I++   H+ + ++ +                                     
Sbjct: 354 SLYSPSQTIKQLSHHLAQSERRL------------------------------------- 376

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        +     +    +++    L++ +   T+ RGY+  Q  + + I    
Sbjct: 377 ----------TDAMDRSQLTARHQLAMMAEKLEAVSPLATIARGYSITQKEDGSVIRSSE 426

Query: 478 NLATKTRILINFFDGQANAIV 498
            ++T  R++     G+  +IV
Sbjct: 427 QVSTGDRLVTKVAQGEIRSIV 447


>gi|145634607|ref|ZP_01790316.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittAA]
 gi|145268152|gb|EDK08147.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittAA]
          Length = 439

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 142/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E   S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGKFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAT 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + I
Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|258627195|ref|ZP_05721983.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM603]
 gi|258580497|gb|EEW05458.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM603]
          Length = 446

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRSVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N+  E       D++I+ RGGGS+EDLW FN E++ R IA S+IPII
Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASNIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                +   L   +    L   + +LD L   LE  +   +  + +  + + ++I+ +  
Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLATQQQRSDRLSHKIQLNSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            H I++ R ++L+++Q + Q+                                       
Sbjct: 355 THLIRQQRFNLLQQEQRLTQL--------------------------------------- 375

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + H +      +++ +  + + +   TL RGY+  +      + Q   +   
Sbjct: 376 --------IQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|306814424|ref|ZP_07448586.1| exodeoxyribonuclease VII large subunit [Escherichia coli NC101]
 gi|222034217|emb|CAP76958.1| exodeoxyribonuclease 7 large subunit [Escherichia coli LF82]
 gi|305851818|gb|EFM52270.1| exodeoxyribonuclease VII large subunit [Escherichia coli NC101]
 gi|312947083|gb|ADR27910.1| exodeoxyribonuclease VII large subunit [Escherichia coli O83:H1
           str. NRG 857C]
 gi|324008514|gb|EGB77733.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 57-2]
          Length = 458

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+   VQGD+ 
Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|68249000|ref|YP_248112.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           86-028NP]
 gi|81336588|sp|Q4QNE5|EX7L_HAEI8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|68057199|gb|AAX87452.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           86-028NP]
          Length = 439

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E N S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGNFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKTLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + I
Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+ +Q + + +                                                 
Sbjct: 354 QRYQQGLEQLKVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|297581165|ref|ZP_06943089.1| exodeoxyribonuclease VII [Vibrio cholerae RC385]
 gi|297534481|gb|EFH73318.1| exodeoxyribonuclease VII [Vibrio cholerae RC385]
          Length = 446

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+   G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQLEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   +IA AI + NT  E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + +  + + ++I+    
Sbjct: 295 TQFARLQYKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRRDRLSHKIELHSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R ++++++Q I Q                                        
Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   +   +      +++ +  L + +   TL RGY+  + T    + Q   +   
Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|83647623|ref|YP_436058.1| exodeoxyribonuclease VII large subunit [Hahella chejuensis KCTC
           2396]
 gi|123531576|sp|Q2SCJ1|EX7L_HAHCH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|83635666|gb|ABC31633.1| exodeoxyribonuclease VII, large subunit [Hahella chejuensis KCTC
           2396]
          Length = 444

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 152/499 (30%), Positives = 240/499 (48%), Gaps = 60/499 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  S  +      +SV+EL+  ++ ++E +   V V GEIS +    SSGH YFSLKD+
Sbjct: 1   MSELSPHS-----PFSVTELNRQVRRLLEVSFMQVWVTGEISNF-SCPSSGHWYFSLKDD 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++     ++  P +G    +  K++ + G  ++Q+I ES+  +G G L  A 
Sbjct: 55  KAQVRCAMFRNRNMFVKQRPRDGEAVTLRAKVSLYEGRGEFQLIAESMELAGEGELRRAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K KL  EGLF +  K P+P +PK + VITSPTGA +RDIL  +  RFP + V++FPV
Sbjct: 115 EELKLKLSREGLFEESRKRPLPAMPKQVGVITSPTGAAVRDILTVLERRFPAIPVLLFPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E    I  AI   N L         D++I+ RGGGS+EDLW FN+E + RAIA S
Sbjct: 175 PVQGKEAGPAIVAAIASANRLNC------CDVLIVGRGGGSLEDLWAFNEEPVARAIAAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++SA+GHETD T+AD  ADLRAPTP+ AAE   P +   +   +  E RL+    RL
Sbjct: 229 AIPVVSAVGHETDITIADLVADLRAPTPSAAAEKVSPDQAEWKHRFLIYEQRLDAAAQRL 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++ +   LN L   L +  + L  S  RLD L   L    + ++  +     H+ +R+ +
Sbjct: 289 LRQEGLRLNQLRGRLKHPGRRLQESAQRLDDLEVRLHRQAQNLLSVRRNQLTHLRDRLLA 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                +++     +      ++  V   LR                              
Sbjct: 349 SSPRQSLKNRYATVDALNHRLQTAVLSVLR------------------------------ 378

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                  +     +++ +   TL RGY  + D N   I  ++ +
Sbjct: 379 -----------------HKSQHFAKLCGHMEAVSPIATLARGYAIVSDENGQIIRSEKEV 421

Query: 480 ATKTRILINFFDGQANAIV 498
            T  ++     DG+ +  V
Sbjct: 422 RTGQKVKARLSDGEIHCEV 440


>gi|49474517|ref|YP_032559.1| exodeoxyribonuclease VII large subunit [Bartonella quintana str.
           Toulouse]
 gi|81827591|sp|Q6FZ30|EX7L_BARQU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|49240021|emb|CAF26437.1| Exodeoxyribonuclease large subunit [Bartonella quintana str.
           Toulouse]
          Length = 475

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 212/530 (40%), Positives = 309/530 (58%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           MN F +K  + +  E+SVSE++  LK +VE    +V VRGEISGYRG H+SGH YFSLKD
Sbjct: 1   MNLFFEKTEATNVAEFSVSEIAGALKRVVEERFGYVRVRGEISGYRGAHASGHVYFSLKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T 
Sbjct: 61  DKARLEAVIWRGIMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKKL +EGLF +  K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKLADEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQGD   +E+A+A+   N L  G   P+PD+II+ARGGGS+EDLW FNDE +VRA+  S
Sbjct: 181 RVQGDTSGREVADALKGFNALPFGGLVPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYES 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           ++P+ISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L+  + +L ARL   + R 
Sbjct: 241 ALPVISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKLDLEVQVASLGARLRMGLARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L +L++ LP  DQ  +  R   D +   L+  L +   +K  +F+ +  R+  
Sbjct: 301 FDFHQQKLRALVRGLPTVDQLFALPRRGFDEISSRLQRALCVSCDKKRFYFHGLNLRLSP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K  ++  E    + +                                     
Sbjct: 361 RLL--NTEKELRNTKEYTARLHR------------------------------------- 381

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + + +R+L+S +Y+N L+RG+      +N  I +    
Sbjct: 382 ----------AFVRNVEKQRAQLEVASRLLKSTSYQNILERGFVLALGPDNKLIKRLVQF 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG+ +         ++    +       + KQ  QG LF
Sbjct: 432 PETGQINLRFFDGEMSV------SARDHGLNRSSKSKRIKSKQDDQGTLF 475


>gi|145638692|ref|ZP_01794301.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittII]
 gi|145272287|gb|EDK12195.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           PittII]
 gi|309750185|gb|ADO80169.1| Exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           R2866]
          Length = 439

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + +
Sbjct: 294 QLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVAERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|329114737|ref|ZP_08243494.1| Exodeoxyribonuclease 7 large subunit [Acetobacter pomorum DM001]
 gi|326695868|gb|EGE47552.1| Exodeoxyribonuclease 7 large subunit [Acetobacter pomorum DM001]
          Length = 484

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/502 (32%), Positives = 259/502 (51%), Gaps = 30/502 (5%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              S + PE++VSE+S  ++  +E   S V VRGEI+  +    SGH YFSLKD   +I 
Sbjct: 8   PSASNNVPEFTVSEISGAIRRTLEGTFSRVRVRGEITELKRYP-SGHVYFSLKDERGKIS 66

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            ++W+G+++++  +PE G+E +  GKI+ +   S YQ+++E +  +G G LL  +E+ + 
Sbjct: 67  GVVWRGSVSRLGLVPENGVEIIATGKISAYGERSSYQLVVERMEYAGEGALLARIERLRL 126

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           KL EEGLF    K  IP +P++I V+TSP GAV+ DI   +  RFP  VI++PV VQG+ 
Sbjct: 127 KLAEEGLFDTARKKAIPLLPRVIGVVTSPQGAVLHDICTTLQRRFPRPVIVWPVPVQGEG 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               IA AI   + L      PRPD++I+ARGGGS+EDL  FNDE +VRA A   IP+IS
Sbjct: 187 AAARIAAAIDGFSQLDGLGAVPRPDVLIVARGGGSLEDLMAFNDEAVVRATAACLIPLIS 246

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+A+D RAPTPT AAEMAVPV+  L + + +  AR    + RL++    
Sbjct: 247 AVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLADIEHRNARAVGALSRLLQTARL 306

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L+    A+P+    L  +R +LD   R L+  L  ++ R+      +   + +      
Sbjct: 307 RLDRASSAMPDLPSLLQTARMQLDDRGRRLDVALPALVQRRKADLVAVERHMPAV----- 361

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                  +  ++  +  +       +    + + A L  LR                   
Sbjct: 362 ----ETLLAGRRTRLAVLANMLQASMAHTFQRQDARLGRLRISPAP-------------- 403

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L   ++   T+++     L++ + +  L RGY  +       +T    L    R+
Sbjct: 404 -----LQALVRERRTALAGIAGQLEAISPRAVLARGYALVT-AEGRPVTSAEQLNDGERV 457

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            + F DG   A++ +     +Q
Sbjct: 458 ELTFGDGARPAVIGDGTHRPKQ 479


>gi|218708649|ref|YP_002416270.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus LGP32]
 gi|218321668|emb|CAV17622.1| Exodeoxyribonuclease VII, large subunit [Vibrio splendidus LGP32]
          Length = 492

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/505 (27%), Positives = 238/505 (47%), Gaps = 58/505 (11%)

Query: 6   QKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
              S+ +P  ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++
Sbjct: 41  DSASMTNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQV 99

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              +++G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    EK K
Sbjct: 100 KCAMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLK 159

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
             L  EGLF+   K  +P  PK + VITS TGA + DIL  +  R P L VI++P  VQG
Sbjct: 160 MNLAAEGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQG 219

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +    +IA AI + N   E       D++I+ RGGGS+EDLW FN+E++ R IA S IPI
Sbjct: 220 EGASIQIAQAIGRANERNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPI 273

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHE D T+AD+ AD+RAPTP+ AAE+      H + +  +  +RL + I  ++  +
Sbjct: 274 ISAVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRSRLVSAIRHVLIKQ 333

Query: 304 INTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
             +  +L   L   +    L     +LD L   L   +   + +  +      ++++ + 
Sbjct: 334 AQSTQTLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNS 393

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
            +  + + + H+   +Q                                           
Sbjct: 394 PVKRLGEQKLHLQRSEQ------------------------------------------- 410

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
               ++   +   + +    +++    L++ +   TLKRGY+     ++  ++   ++  
Sbjct: 411 ----KLLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEI 466

Query: 482 KTRILINFFDGQANAIVINKAPPKE 506
              I     DG   + V  +    E
Sbjct: 467 GEVITTQVEDGVIESQVTTRVAKSE 491


>gi|333001706|gb|EGK21272.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-218]
          Length = 447

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 144/498 (28%), Positives = 232/498 (46%), Gaps = 57/498 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + + T   
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428

Query: 485 ILINFFDGQANAIVINKA 502
           +     DG   + V   +
Sbjct: 429 LTTRLEDGWIESEVKTSS 446


>gi|331658650|ref|ZP_08359594.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA206]
 gi|331054315|gb|EGI26342.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA206]
          Length = 458

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/510 (27%), Positives = 227/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS T A + DIL  +  R P L VII+   VQGD+ 
Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTSAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|333002304|gb|EGK21868.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-272]
          Length = 447

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELSNQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKA 502
           +     DG   + V   +
Sbjct: 429 LTTRLEDGWIESEVKTSS 446


>gi|329122272|ref|ZP_08250860.1| exodeoxyribonuclease VII large subunit [Haemophilus aegyptius ATCC
           11116]
 gi|327473833|gb|EGF19250.1| exodeoxyribonuclease VII large subunit [Haemophilus aegyptius ATCC
           11116]
          Length = 439

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQMRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + +
Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|16272346|ref|NP_438559.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae Rd
           KW20]
 gi|260580540|ref|ZP_05848368.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           RdAW]
 gi|1169574|sp|P43913|EX7L_HAEIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|1573368|gb|AAC22056.1| exodeoxyribonuclease VII, large subunit (xseA) [Haemophilus
           influenzae Rd KW20]
 gi|260092882|gb|EEW76817.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           RdAW]
          Length = 439

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 232/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E N   + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKTLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + I
Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+ +Q + + +                                                 
Sbjct: 354 QRYQQGLEQLKVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|261212134|ref|ZP_05926420.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC341]
 gi|260838742|gb|EEX65393.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC341]
          Length = 446

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/496 (28%), Positives = 241/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K  +P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKALPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N   E       D++I+ RGGGS+EDLW FN E++ R IA S IPII
Sbjct: 181 DAAIQIAQAIGRANARAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  ++  +  + +  + + ++I+ +  
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRSDRLSHKIQLNSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           IH I++ R +++ ++QH+ Q ++ H                                   
Sbjct: 355 IHQIRQQRFNLIRQEQHMNQSIQHH----------------------------------- 379

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                       +      +++ +  L + +   TL RGY+  +      +     +   
Sbjct: 380 ------------LIHARHRLALLSEKLDAVSPLATLARGYSVTRTAQGELVRYGNQVKAG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLIDGEIVSTV 443


>gi|145630430|ref|ZP_01786211.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           R3021]
 gi|144984165|gb|EDJ91602.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           R3021]
          Length = 439

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/492 (29%), Positives = 236/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + I+E + S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAT 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L+  L   +    L   + + ++L   L+  +        + F  +  R+K + L + I
Sbjct: 294 QLILRLQNQHPQNQLRAQQAKNEQLAHRLQLAMLRQFENTQQKFTALSVRLKQNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENLQGKAIVSVKDVNQGDLIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|325578755|ref|ZP_08148802.1| exodeoxyribonuclease VII large subunit [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159579|gb|EGC71711.1| exodeoxyribonuclease VII large subunit [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 439

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSENIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRGAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVGFRPQNGMQVLVRANVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + ++TS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKSLPDFAKAVGIVTSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSNLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L   + RL   + R+  ++   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKQQRLEMALDRIFSHQQQRLQ 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + R ++L   L   ++  + +  +    +  R+K + L + +
Sbjct: 294 QLRLRLQNQHPQNQLLMQKARTEQLHHRLVLAMQRQMDKTQQKLTALSARLKQNPLPYRL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           QK  Q++ + Q                                                 
Sbjct: 354 QKQSQYLAQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +    + ++      ++     L   +    L RGY+  +D   + I   + + T   I 
Sbjct: 367 LNLGANRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAEDVKGHAIVSVKQVKTGDTIK 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TKVADGEITSRV 438


>gi|26248870|ref|NP_754910.1| exodeoxyribonuclease VII large subunit [Escherichia coli CFT073]
 gi|227887541|ref|ZP_04005346.1| exodeoxyribonuclease VII large subunit [Escherichia coli 83972]
 gi|300981968|ref|ZP_07175814.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 45-1]
 gi|301047138|ref|ZP_07194234.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 185-1]
 gi|31563152|sp|Q8FF64|EX7L_ECOL6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|26109276|gb|AAN81478.1|AE016764_160 Exodeoxyribonuclease VII large subunit [Escherichia coli CFT073]
 gi|227835891|gb|EEJ46357.1| exodeoxyribonuclease VII large subunit [Escherichia coli 83972]
 gi|300300940|gb|EFJ57325.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 185-1]
 gi|300408863|gb|EFJ92401.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 45-1]
 gi|307554529|gb|ADN47304.1| exonuclease VII, large subunit [Escherichia coli ABU 83972]
 gi|315292454|gb|EFU51806.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 153-1]
          Length = 458

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+   VQGD+ 
Sbjct: 122 QAEGLFELQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           +     DG   + V      ++   K    
Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|218690624|ref|YP_002398836.1| exodeoxyribonuclease VII large subunit [Escherichia coli ED1a]
 gi|254783701|sp|B7MYD7|EX7L_ECO81 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218428188|emb|CAR09103.2| exonuclease VII, large subunit [Escherichia coli ED1a]
          Length = 458

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+   VQGD+ 
Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  ++       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           ++    DG   + V      ++   K    
Sbjct: 429 LITRLGDGVVISEVSAVTKTRKSRKKTSNP 458


>gi|319406793|emb|CBI80426.1| exodeoxyribonuclease VII large subunit [Bartonella sp. 1-1C]
          Length = 477

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 210/530 (39%), Positives = 308/530 (58%), Gaps = 54/530 (10%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F +K+ + +  E+SVSE++  LK IVE    +V VRGEISGYRG+H+SGHAYF+LKD
Sbjct: 1   MDLFLEKSVATNVAEFSVSEIAGALKRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII+SL P+G G L+T 
Sbjct: 61  DKARLEAVIWRGVVEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDSLEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK  +EGLF +  K  +P++P++I V+TSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKFADEGLFDEAKKKKLPYMPRVIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   N L       +PD+II+ARGGGS+EDLW FNDE +VRA++ S
Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLENAISKPDLIIVARGGGSLEDLWGFNDEAVVRAVSVS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L++ L +L  R      R 
Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKFDLETHLASLSLRFRVGAARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L+++++ LP +DQ  +  R   D +   L+  L +   +K  +F  ++ R+  
Sbjct: 301 FSFYKQKLSAVVRGLPTADQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLSP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K +Q+  E    +     ++                                
Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFLRN-------------------------------- 386

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++   T + +T R+L+S +Y++ L+RG+    +  N  I +    
Sbjct: 387 ---------------VEKKRTQIKMTFRLLKSTSYQSILERGFVLALEQENKPIKRLAQF 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG+ N    N                 K+ +   QG LF
Sbjct: 432 PKTGQISLRFFDGKINVSTCN----SVSKNVPKPKKRLKQWQDDDQGTLF 477


>gi|149190082|ref|ZP_01868359.1| exodeoxyribonuclease VII large subunit [Vibrio shilonii AK1]
 gi|148836112|gb|EDL53072.1| exodeoxyribonuclease VII large subunit [Vibrio shilonii AK1]
          Length = 437

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/489 (30%), Positives = 236/489 (48%), Gaps = 57/489 (11%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           S L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   +++G   ++ 
Sbjct: 2   SRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMFRGNNRRVT 60

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137
           F P  G + LV  +++ +     YQ+IIES+ P G G L    EK K  L  EGLF+   
Sbjct: 61  FKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEKLKMSLAAEGLFAQTL 120

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196
           K P+P  PK + +ITS TGA + DIL  +  R P L V+I+P  VQGD    EIA AI +
Sbjct: 121 KQPLPSHPKRVGIITSKTGAALFDILDVLKRRDPSLPVVIYPTTVQGDNAAIEIAQAIGR 180

Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256
            N+  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GHE D T+A
Sbjct: 181 ANSRNE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVGHEIDVTIA 234

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL-- 314
           DY AD+RAPTP+ AAE+      H + SLI  E RL NII   +  +   L+SL++ L  
Sbjct: 235 DYVADVRAPTPSAAAELVSNDTSHKRESLITREQRLRNIIRLYLSEQKQRLSSLMQDLSN 294

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +    L     RLD     L   ++  + ++     + ++R+K    +  + +    + 
Sbjct: 295 QHPKHHLQRQSQRLDEFEYRLNAAMKQRLSQETLRLTNKLHRLKLQSPVTRLAQQSHRLT 354

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           + +  +EQ                                                +  +
Sbjct: 355 QFESRLEQ-----------------------------------------------AMQRQ 367

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           + S     ++T   L + +   TLKRGY+  QD +   I+   ++   + +      G  
Sbjct: 368 LSSTKHKFALTVGKLDTVSPLATLKRGYSITQDEDGKVISHVDSVEIGSTMTTQVEHGTL 427

Query: 495 NAIVINKAP 503
            + V +  P
Sbjct: 428 VSTVTDIKP 436


>gi|262165077|ref|ZP_06032814.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM223]
 gi|262024793|gb|EEY43461.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM223]
          Length = 446

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +  +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++ 
Sbjct: 2   SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++KG    + F P+ G + LV  +++ +     YQII+ES+ P G G L    E+ K 
Sbjct: 61  CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF+   K P+P  P+ + +ITS TGA + DIL  +  R P L V+I+P  VQG+
Sbjct: 121 QLAAEGLFAQTRKKPLPENPRSVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   +IA AI + N+  E       D++I+ RGGGS+EDLW FN E++ R IA S+IPII
Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASNIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD+ AD+RAPTP+ AAE+      H Q +L   +A+L + +   +  + 
Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQRH 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L   +    L   + +LD L   LE  +   +  + +  + + ++I+ +  
Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLTVQQQRSDRLSHKIQLNSP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            H I++ R ++L+++Q + Q                                        
Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + H +      +++ +  + + +   TL RGY+  +      + Q   +   
Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTVQGELVRQSAQVKPG 427

Query: 483 TRILINFFDGQANAIV 498
             ++    DG+  + V
Sbjct: 428 DTLVTQLMDGEILSTV 443


>gi|333016515|gb|EGK35846.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-304]
          Length = 447

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             E LF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + + T   
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428

Query: 485 ILINFFDGQANAIVINKA 502
           +     DG   + V   +
Sbjct: 429 LTTRLEDGWIESEVKTSS 446


>gi|319775674|ref|YP_004138162.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           F3047]
 gi|319898081|ref|YP_004136278.1| exodeoxyribonuclease vii large subunit [Haemophilus influenzae
           F3031]
 gi|317433587|emb|CBY81971.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           F3031]
 gi|317450265|emb|CBY86481.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           F3047]
          Length = 439

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E N   + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K  +L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQSLK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + + ++L   L+  +        + F  +  R+K + L + +
Sbjct: 294 QLTLRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+++QH+ + Q                                                 
Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + F ++ ++      ++     L   +    L RGY+  ++     I   +++     I 
Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TQVADGKIVSKV 438


>gi|152979434|ref|YP_001345063.1| exodeoxyribonuclease VII large subunit [Actinobacillus succinogenes
           130Z]
 gi|150841157|gb|ABR75128.1| exodeoxyribonuclease VII, large subunit [Actinobacillus
           succinogenes 130Z]
          Length = 448

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/500 (28%), Positives = 233/500 (46%), Gaps = 57/500 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   YSVS+L++  K ++E  L  V + GEIS +     SGH Y +LKD +S++ A +++
Sbjct: 3   NANIYSVSQLNHAAKMLLEGQLGLVWLTGEISNF-SQPVSGHWYLTLKDENSQVRAAMFR 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++ F P+ GI+ LV   ++ +     YQ+IIES+ P+G G L    E+ K KL  E
Sbjct: 62  MKNMRVGFRPQNGIQVLVRAAVSLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKMKLAAE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+   K  +P   K + VITSPTGA ++DIL  +  R P L+V+I+P  VQG E   E
Sbjct: 122 GLFAQNLKKNLPHFCKTVGVITSPTGAALQDILHILKRRDPNLKVVIYPCAVQGKEAAGE 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI +S++P+ISA+GH
Sbjct: 182 IVEMIELANVRRE------VDVLIVGRGGGSLEDLWCFNEEAVARAIFDSTLPVISAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD T+AD+ AD+RAPTP+ AAE+    ++ L+  L     RL+  + R+I  +   L  
Sbjct: 236 ETDVTIADFVADVRAPTPSAAAELVSRNQDELRQQLNYKRQRLDMALDRIISLQHQRLQR 295

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L+  L   +    L+    R   L + L   +  ++ +       +  R++ + L + +Q
Sbjct: 296 LILRLQNQHPQNQLNIQSQRTALLTQRLTAAITRLMEKNRNKLTALATRLRQNPLPYRVQ 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           K  Q++ +                                                   +
Sbjct: 356 KQCQYMEQLHAR-----------------------------------------------L 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
            F + + +      ++     L   +    L RGY+  Q+     +T    +     +  
Sbjct: 369 NFAVENNLSVRRHKLANLCGKLDGLSPLKVLARGYSIAQNEQGIAVTSIAQIRPDETLRT 428

Query: 488 NFFDGQANAIVINKAPPKEQ 507
              DG   + +         
Sbjct: 429 QVADGIIESRISKIKKKARS 448


>gi|332087956|gb|EGI93081.1| exodeoxyribonuclease VII, large subunit [Shigella boydii 5216-82]
          Length = 456

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + +ITS TGA + DIL  +  R P L  II+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGMITSKTGAALHDILHVLKRRDPSLPAIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +I                                         
Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + + + +     
Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDRIVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|114797378|ref|YP_759647.1| exodeoxyribonuclease VII large subunit [Hyphomonas neptunium ATCC
           15444]
 gi|114737552|gb|ABI75677.1| exodeoxyribonuclease VII, large subunit [Hyphomonas neptunium ATCC
           15444]
          Length = 475

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 183/528 (34%), Positives = 266/528 (50%), Gaps = 60/528 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P     + +HPE +VSEL+  LK  +E+N   V VRGE+ G   I  SGH Y  LKD+ 
Sbjct: 8   QPMPDSPTTNHPELTVSELAASLKRTIETNYDQVTVRGEL-GRVTIAKSGHMYADLKDDK 66

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + ++ I+W+G ++++ F PEEG+E +  G+++T+ G S YQ+I  ++ P+G+G L+  LE
Sbjct: 67  AVLNTIMWRGQVDRLTFRPEEGLEVVATGRLSTYEGRSAYQMIASTMRPAGAGALMQLLE 126

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +RKKKL  EGLF   HK PIP++P+ I VITSPTGAVIRDIL RI  RFP+RVI++P  V
Sbjct: 127 ERKKKLAAEGLFDQAHKKPIPYMPRTIGVITSPTGAVIRDILHRIRERFPVRVIVWPALV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG++   ++   I   N +       RPD++I+ARGGGSIEDLW FN+E++VRA   S I
Sbjct: 187 QGEQAASQVTAGIRGFNAMTGAD---RPDVLIVARGGGSIEDLWPFNEEVVVRAAFESEI 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL DY +D RAPTPTGAAE+AVPV+  L   +     RL   + R + 
Sbjct: 244 PLISAVGHETDTTLIDYVSDRRAPTPTGAAEIAVPVRTELMLGIEESGQRLKRALTRALS 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              +        LP  +  L   R RLD     L      +  R     + +   +    
Sbjct: 304 --RSRDKLAAARLPRPESLLQSKRQRLDFASASLPRAALALTQRARLKLSRLQ--LSPAT 359

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L   I+  RQ + +        +                                     
Sbjct: 360 LKAEIRGQRQRLRDTAVRARPALM------------------------------------ 383

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                        I     +++   ++L++ +Y+ TLKRGY  ++DT    +       T
Sbjct: 384 -----------RLIDQKKAALTSEGKLLETLSYQATLKRGYVIVRDTGGQLVRNAAQAQT 432

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + + F DG   A     AP + +             ++G QG LF
Sbjct: 433 LDTLRVTFADGDITA-----APFEGETPPPAPKPKPAPRRKGEQGNLF 475


>gi|37678958|ref|NP_933567.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus YJ016]
 gi|37197700|dbj|BAC93538.1| exonuclease VII, large subunit [Vibrio vulnificus YJ016]
          Length = 461

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/495 (29%), Positives = 238/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ L  V + GEIS +     SGH YF+LKD+ +++  
Sbjct: 20  SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 78

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G    + F P  G + LV  +++ +     YQ+IIES+ P G G L    +  K K
Sbjct: 79  AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 138

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K  IP  PK + +ITS TGA + DIL  +  R P L V+I+P  VQG+E
Sbjct: 139 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 198

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 199 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 252

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ ADLRAPTP+ AAE+      H   +LI+ E +L       +  +  
Sbjct: 253 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALISREQKLRAAWRHYLTEQNR 312

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           T+ SL   L   +    L     + D L   L+  +E  + ++ +  + + ++++    +
Sbjct: 313 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 372

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +Q +   +                                       
Sbjct: 373 RQISEQKNALARVEQKMMDAM--------------------------------------- 393

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     K+      ++I    L + +   TLKRGY+  Q  +   IT++  + T  
Sbjct: 394 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGEVITRQSQIKTGD 445

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 446 TLVTRLSDGEIRSTV 460


>gi|163853273|ref|YP_001641316.1| exodeoxyribonuclease VII, large subunit [Methylobacterium
           extorquens PA1]
 gi|163664878|gb|ABY32245.1| exodeoxyribonuclease VII, large subunit [Methylobacterium
           extorquens PA1]
          Length = 522

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 202/549 (36%), Positives = 284/549 (51%), Gaps = 68/549 (12%)

Query: 2   NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            P        + PE+SV +L+  LK  +E    HV +RGEI+GYRG H SGHAYFSLKD 
Sbjct: 21  EPAPSAVLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++IDA++WKG L ++   P+EG+E +  GKITTF G S YQI+I+S+ P+G G  +  L
Sbjct: 81  SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K PIPF+P++I V+TSPTGAVIRDIL R+  RFP  V+++PV+
Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   +EIA AI   N L      PRPD++I+ARGGGSIEDLW FN+E +VRA A S 
Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+  L + +  L AR    ++R I
Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRTELSAQIHELGARQAGTMLRRI 320

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +     +L++A+P +D  L+  R RLD                       + +     
Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L  N + +R+ +      + +      R   +   E  A L  +  + +  +  +    
Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +   T +L + +YK  L RGY  ++D +   +      A
Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453

Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKRE--------------- 520
              R  + F DG   A          APP  +     +     R                
Sbjct: 454 RAARFQLQFADGAIFARPEEAPDDPVAPPLAEAPPSPRPKRAPRRAAPEPAPKPEKAAAE 513

Query: 521 KQGTQGELF 529
               QG LF
Sbjct: 514 PAARQGSLF 522


>gi|89094125|ref|ZP_01167068.1| exodeoxyribonuclease VII large subunit [Oceanospirillum sp. MED92]
 gi|89081600|gb|EAR60829.1| exodeoxyribonuclease VII large subunit [Oceanospirillum sp. MED92]
          Length = 452

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/493 (28%), Positives = 234/493 (47%), Gaps = 55/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
             +   SVSEL+   + ++E +   + V GEIS +    SSGH YF+LKD+ +++   ++
Sbjct: 11  TSNHALSVSELNRQARLLLERSFLTIEVTGEISNFV-KPSSGHWYFTLKDDKAQVRCAMF 69

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K     I F P++G + +V  K++ + G   YQ+I E +   G G+L  A E+ K KL +
Sbjct: 70  KNRNQLIRFSPKQGDQVVVRAKVSLYEGRGDYQLICEFMSQDGGGSLQAAYEELKLKLNQ 129

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++HK P+P  P  I V+TSPTGA I DIL  +  RFP L V ++P  VQG++ P 
Sbjct: 130 EGLFGNEHKKPLPEHPARIGVVTSPTGAAIHDILTVLKRRFPGLPVTLYPTAVQGEDAPA 189

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I  AI+     +E       D++I+ RGGGS+EDLW FN E + R I +  IP+ISA+G
Sbjct: 190 QICKAIILAEAHQE------CDVLIVGRGGGSLEDLWPFNTEPVARTIFDCEIPVISAVG 243

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D  ++DY AD+RAPTP+ AAE+  P +  L+  L     RL   +  +I+   N + 
Sbjct: 244 HEVDTVISDYVADVRAPTPSAAAELISPDQHQLKLRLRQQSERLQRQLNSVIQDANNRIY 303

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +L   L +  Q L     RLD L   L+   ++ +  +     ++  R++++     + +
Sbjct: 304 NLKSRLRHPGQQLREKAQRLDHLEIRLQQAAQLSLSGRKCRIENLRTRLQANTPQQRLLQ 363

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           + + I   +  + Q +                                   ++    ++ 
Sbjct: 364 HSERIKNFKSRLAQGILH--------------------------------KLEFNRQQLN 391

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L + +   TL+RGY  +QD     +T   + +   +I   
Sbjct: 392 KA---------------AAQLNTVSPLATLERGYAIVQDQQGKVLTDTHDSSVGDQIEAR 436

Query: 489 FFDGQANAIVINK 501
              G+    +   
Sbjct: 437 LHQGRMKCTINEI 449


>gi|323971078|gb|EGB66326.1| exodeoxyribonuclease VII [Escherichia coli TA007]
          Length = 447

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 230/498 (46%), Gaps = 57/498 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+ N + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKA 502
           +     DG   + V   +
Sbjct: 429 LTTRLEDGWIESEVKTSS 446


>gi|84387647|ref|ZP_00990664.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus 12B01]
 gi|84377492|gb|EAP94358.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus 12B01]
          Length = 448

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 2   TNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    EK K  L  
Sbjct: 61  RGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLKMNLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  PK + VITS TGA + DIL  +  R P L VI++P  VQG+    
Sbjct: 121 EGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDILKRRDPSLPVIVYPTMVQGEGASI 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N   E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 181 QIAQAIGRANERDE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H + +  +  ARL + I  ++  +  +  
Sbjct: 235 HEIDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRARLVSAIRHVLIKQAQSTQ 294

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +L   L   +    L     +LD L   L   +   + +  +      ++++ +  +  +
Sbjct: 295 TLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNSPVKRL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + + H+   +Q                                               +
Sbjct: 355 GEQKLHLQRSEQ-----------------------------------------------K 367

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +   + +    +++    L++ +   TLKRGY+     ++  ++   ++     I 
Sbjct: 368 LLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEVGEVIT 427

Query: 487 INFFDGQANAIVINKAPPKE 506
               DG   + V       E
Sbjct: 428 TQVEDGVIESQVTTSVAKSE 447


>gi|126668435|ref|ZP_01739392.1| exodeoxyribonuclease VII, large subunit [Marinobacter sp. ELB17]
 gi|126627144|gb|EAZ97784.1| exodeoxyribonuclease VII, large subunit [Marinobacter sp. ELB17]
          Length = 449

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/499 (30%), Positives = 226/499 (45%), Gaps = 56/499 (11%)

Query: 4   FSQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
            +       P   SVSEL++  +H++E++   V V GE+SG+    SSGH YFSLKD + 
Sbjct: 1   MNDAFQDTRPRALSVSELNHQARHLLETSFMQVWVEGELSGF-SRPSSGHWYFSLKDRNC 59

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I   +++G   ++   P+EG    + GK+T +     +QII+E L P+G+G L  A E 
Sbjct: 60  QIRCAMFRGANQRVRPAPKEGELVRIRGKVTLYENRGDFQIIVEHLEPAGAGALQQAFEA 119

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K KL  EGLFS + K PIP +P+ I V+TSPTGA I DIL  ++ R P + V ++P  V
Sbjct: 120 LKLKLFNEGLFSTERKKPIPALPRHIGVVTSPTGAAIHDILTVLARRCPGIPVTLYPTAV 179

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +I  AI +           R D++I+ RGGGS+EDLW FN+E + RAIA   I
Sbjct: 180 QGQAATADIVAAIGRAVA------HNRADVLIIGRGGGSLEDLWCFNEEAVARAIAACPI 233

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
             +SA+GHE D T+ADY ADLRAPTP+ AAE   P +      L  +  RL   + R   
Sbjct: 234 ATVSAVGHEVDTTIADYVADLRAPTPSAAAEKISPDQSIWLRQLQAISERLQAAMGRQHT 293

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              N L  L   L +  ++L     RLD L   L   +  +  R +   +H+  R+    
Sbjct: 294 ALENRLLQLSTRLKDPRRSLQEKAQRLDGLDLRLSRAMAQLTQRLHMRTDHLQQRLAMQS 353

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               +    + +L     +                                         
Sbjct: 354 PNRQLASAGERVLRATTGLNLA-------------------------------------- 375

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                I+  L  +       +  T + L   +   TL RGY  ++D     +     L  
Sbjct: 376 -----IQQALKSR----REQLDYTAQTLNLVSPLATLGRGYAIVKDDQGKIVRHAGQLEA 426

Query: 482 KTRILINFFDGQANAIVIN 500
              I     +G  +A V +
Sbjct: 427 GQAISARVANGTVHAQVTS 445


>gi|90579807|ref|ZP_01235615.1| exodeoxyribonuclease VII large subunit [Vibrio angustum S14]
 gi|90438692|gb|EAS63875.1| exodeoxyribonuclease VII large subunit [Vibrio angustum S14]
          Length = 449

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/502 (27%), Positives = 238/502 (47%), Gaps = 57/502 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  FS ++  +   Y+VS L+  ++ ++E+ +  V + GE+S +  +  SGH YF+LKD+
Sbjct: 1   MTTFSPQSQTNSRIYTVSSLNAQVRLVLENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG+   + F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 60  RAQVKCAMFKGSNRHVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K  +P  PK + +ITS TGA + DILQ +  R P L ++I+P 
Sbjct: 120 EQLKMSLAAEGLFAQSLKQTLPEQPKRVGIITSKTGAALHDILQVLQRRDPSLPIVIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     IA AI + N  +E       D++I+ RGGGS+EDLW FN+E++ R IA S
Sbjct: 180 MVQGEGSAISIAQAIGRANARQE------CDVLIIGRGGGSLEDLWAFNEEIVARTIAAS 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H    L   + +L + I   
Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLDRKKQQLRHAIRSY 293

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +   +     L   L   +    L+  +  LD + + L   ++  I +  +H +    +I
Sbjct: 294 LSQSLRQATQLQHRLERQHPQLRLNQQQQHLDEISQRLIQAMQKKIQKHQQHIDSNNYKI 353

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   +   ++++   ++                                       
Sbjct: 354 SLYSPATLVSNAQRNLERSERR-------------------------------------- 375

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                    +   L  K+ +    +++    L++ +   TL RGY+  ++   + I    
Sbjct: 376 ---------LYDALDRKLLNAKHKLAVAAEKLETVSPLATLARGYSITRNEQGDVIRNTS 426

Query: 478 NLATKTRILINFFDGQANAIVI 499
            +    +++    DG  ++ +I
Sbjct: 427 QVKHGDKLITTVTDGDIHSCII 448


>gi|118580820|ref|YP_902070.1| exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM
           2379]
 gi|118503530|gb|ABL00013.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM
           2379]
          Length = 475

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 161/527 (30%), Positives = 255/527 (48%), Gaps = 64/527 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+ FS+K        +VS L+  L+ ++E N   V V+GE+S +    SSGH YFSLKD+
Sbjct: 1   MDLFSEKI-----ILTVSRLTSLLRDVLEENFQQVWVQGEVSNFSS-PSSGHFYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  +++KG    ++F P +G+  +  G+I+ +     YQ+I E L P+G G L  A 
Sbjct: 55  GAQLRCVMFKGAARNLKFRPGDGMALIARGRISVYDQRGDYQLICEYLEPAGVGALQAAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
           ++ K++L  EGLF   HK  +PF P+ + VITS TGA I DIL  +  RF  L ++++PV
Sbjct: 115 QQLKERLAREGLFDQAHKRHLPFFPRRLGVITSATGAAIHDILNVLRRRFASLEILLYPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+    EIA A+ ++N L+        D++I+ RGGGS+EDLW FN+E++ RA+  S
Sbjct: 175 RVQGEGAGLEIARAVEEMNRLQMA------DVLIVGRGGGSLEDLWAFNEEVLARALYRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETDWT+AD+ ADLRAPTP+ AAE+ V   + L+  +  LE RL   +   
Sbjct: 229 AIPVISAVGHETDWTIADFVADLRAPTPSAAAELVVASADELRGRVEGLEHRLGLAMESR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +    + + SL + L +   TL     R+D L   LE  L   + R    F+ +   +  
Sbjct: 289 LSTLESRVASLRRLLADPSATLGHLAQRVDDLTERLELGLHNGVMRLKERFDRLDRLLMQ 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              +  +++ RQ +L    H E                                      
Sbjct: 349 HSPLARVEQLRQRLLLLVSHGE-------------------------------------- 370

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRN 478
                      +  +++    +       L+  +   TL RGY+   +  +   I+    
Sbjct: 371 ---------RSMLLRLEGDKQAFGAAAARLEVLSPLATLSRGYSITSRQQDGRVISDASQ 421

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ 525
           L     + +    G A+  V     P E    K   H +  E    Q
Sbjct: 422 LKMGELLDVRLRHGAAHCRVEGVQLPTE---PKPLTHADDSEILSDQ 465


>gi|260582339|ref|ZP_05850132.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           NT127]
 gi|260094707|gb|EEW78602.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae
           NT127]
          Length = 443

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 235/495 (47%), Gaps = 58/495 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + I+E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     + F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLHVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K  +P   K + +ITS TGA ++DIL  ++ R P L+VII+P  VQG E 
Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVIIYPTAVQGKEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN-DEMIVRAIANSSIPIIS 245
             EI   I   N  +E       D++I+ RGGGS+EDLW FN +E + RAI  S++PIIS
Sbjct: 181 TAEIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEEVARAIFRSTLPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L + + RL+    RL   K  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQ 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L  L   L   +    L   + + ++L   L+  +        + F  + +R+K + L 
Sbjct: 295 RLKQLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAMLRQFENTQQKFTALSSRLKQNPLP 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
           + +Q+++Q + + Q                                              
Sbjct: 355 YRVQRHQQRLEQLQVR-------------------------------------------- 370

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +   ++ ++      ++     L   +    L RGY+  ++     I   +++    
Sbjct: 371 ---LNICVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGD 427

Query: 484 RILINFFDGQANAIV 498
            I     DG+  + V
Sbjct: 428 FITTQVADGKIVSKV 442


>gi|323156163|gb|EFZ42322.1| exodeoxyribonuclease VII, large subunit [Escherichia coli EPECa14]
          Length = 456

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +   AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + + ++                                       
Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++ +           L++ +  +TL R Y+    T+ N + + + +     
Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLAREYSVTTATDGNVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454


>gi|170767575|ref|ZP_02902028.1| exodeoxyribonuclease VII, large subunit [Escherichia albertii
           TW07627]
 gi|170123909|gb|EDS92840.1| exodeoxyribonuclease VII, large subunit [Escherichia albertii
           TW07627]
          Length = 457

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/504 (28%), Positives = 230/504 (45%), Gaps = 57/504 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    SSGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEQEMGQVWISGEISNF-SQPSSGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQFKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANIRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRARR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + +  +    +I R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTALERLQKRMSFALENQLKQANQQQQRLIQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           +I + +  I + +                                               
Sbjct: 356 HIHRAQTRIQQLEYR--------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   L  ++             L++ +  +TL RGY+     + + + Q + +     
Sbjct: 371 --LTETLRAQLGDTRERFGNAVTHLEAVSPLSTLARGYSVTSAADGSVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQP 508
           +     DG   + V      ++  
Sbjct: 429 LTTRLGDGVVVSEVSAVKRSRKPR 452


>gi|296282929|ref|ZP_06860927.1| exodeoxyribonuclease VII large subunit [Citromicrobium
           bathyomarinum JL354]
          Length = 491

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 187/526 (35%), Positives = 262/526 (49%), Gaps = 49/526 (9%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + +   +    SVS+LS  LK +VE     V +RGE+SG +   +SGH Y SLKD+ S 
Sbjct: 15  ANSRPGDNSEPLSVSDLSRSLKRVVEDRFGFVRIRGELSGVK-RAASGHLYCSLKDDKSV 73

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WK    ++ F PE+G+E +  GK+TT+ G SKYQI+IE +  +G G LL  LEK 
Sbjct: 74  IDGVMWKSAAPRLAFRPEDGVEVIASGKVTTYAGRSKYQIVIERMELAGEGALLALLEKT 133

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K +L  EGLF+D  K P+PF+P+ I V+TSPTGAVIRDIL R+S RFP  VI++PV VQG
Sbjct: 134 KARLEAEGLFADARKKPLPFLPRTIGVVTSPTGAVIRDILHRLSDRFPSHVIVWPVVVQG 193

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +    +++ A+   N L+ G    RPD++I+ARGGGSIEDLW FN+E +VRAIA S IP+
Sbjct: 194 ETAKGQVSAAVRGFNALERGGAIARPDLLIVARGGGSIEDLWAFNEEEVVRAIAESEIPV 253

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TLAD+AAD RAPTPT AAE AVPV+  L + + +L AR      R +   
Sbjct: 254 ISAVGHETDTTLADFAADHRAPTPTAAAERAVPVRAELAAGIADLGARQMRCATRPVALG 313

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L +  + LP  D  L  +   LD         L   +            R+    L 
Sbjct: 314 RERLEACSQRLPRPDALLQAAAQALDDAIERHRRALVDRVAIGRATLGEAAARLSPATLN 373

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + R+                                        R+ ++      L
Sbjct: 374 WRLGQARE----------------------------------------RLEHVRLMPATL 393

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
            TR               ++    +L+S      L+RGY  + D     +    +  T  
Sbjct: 394 TTRHARATER--------LAANVAMLRSLDPDAPLQRGYAMVFDGQGALVRSAGDARTAG 445

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + + F DG+  A   +  PP   P    +           QG+LF
Sbjct: 446 TLSLKFADGRVAASTGDAPPPPATPAPAPKPRRKSPPPPSGQGDLF 491


>gi|152976584|ref|YP_001376101.1| exodeoxyribonuclease VII large subunit [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189037856|sp|A7GSJ8|EX7L_BACCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|152025336|gb|ABS23106.1| exodeoxyribonuclease VII, large subunit [Bacillus cytotoxicus NVH
           391-98]
          Length = 451

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE+G++ LV GKI+ +  S  YQI +  + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K PIP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSRVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGEFA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVQAIQTAN------EMNDIDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    +Q  ++    RL   +  ++  +   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNILEMQEKVLQRTLRLQRAMREIVHKRQER 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +L K+       Q       +LDR   +L    E  + +K      +   ++      
Sbjct: 294 LQTLQKSYAFRYPRQIYEQKEEQLDRALEQLVLAKERYMEKKVNQLKQLSFYLEKHHPAQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ + +                                          
Sbjct: 354 RISQTKIAIETLQKQLRRE----------------------------------------- 372

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +   +++   +     + L++ +    + RGY  +    N  +   ++++    
Sbjct: 373 ------MQTVLQTKEFAFVRIAKQLEALSPLKVMMRGYGLVYSEKNQVLKSVKDVSAGDV 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V +  
Sbjct: 427 VSVQLQDGILDCNVSSVK 444


>gi|319408943|emb|CBI82600.1| exodeoxyribonuclease VII large subunit [Bartonella schoenbuchensis
           R1]
          Length = 471

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 212/530 (40%), Positives = 309/530 (58%), Gaps = 60/530 (11%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ FS +  + +  E+SVSE+S  LK I+E   +++ VRGEISGYRG+H+SGHAYF+LKD
Sbjct: 1   MDLFSPRPVATNVAEFSVSEVSSALKRIIEDKFAYIRVRGEISGYRGVHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+  + K++F PEEG+E + +GK+TT+PGSSKYQI+I++L P+G G L+T 
Sbjct: 61  DKARLEAVIWRSLMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIDALEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKKL +EGLF +  K P+P++P+II V+TSPTGAVI DI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKLADEGLFDEAKKRPLPYMPQIIGVVTSPTGAVIHDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   N L  G    +PD+II+ARGGGS+EDLW FNDE +VRA+  S
Sbjct: 181 RVQGETSGREVACAIEGFNALPLGGVLLKPDLIIVARGGGSLEDLWGFNDEAVVRAVHAS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETDWTL DYAAD RAPTPTGAAE AVPVK  L+  L +L ARL   + R 
Sbjct: 241 TIPVISAVGHETDWTLIDYAADWRAPTPTGAAERAVPVKIDLEVQLASLGARLRAGLTRY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L ++ + L  +DQ L+  R   D +   L+  L I   +K  +F  +  R   
Sbjct: 301 FSFHQQKLRAISRGLLTADQLLALPRRGFDEISSRLQRALCISYEKKLFYFRALSVRFSP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K R ++     H+ +                                     
Sbjct: 361 RLL--NSEKARYNVKGYTIHLRRAFL---------------------------------- 384

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++       +  R+L+S +Y+N L+RG+      +N  + +   L
Sbjct: 385 -------------RNVEKQRAQAEMAFRLLKSTSYQNILERGFVLALGQDNKPVKRLVQL 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               R+ + FFDG+ N   +N A            +   ++++  QG LF
Sbjct: 432 PKTGRMSLRFFDGEINVSTLNCA----------SKNKRIKQQKDDQGTLF 471


>gi|86145602|ref|ZP_01063932.1| exodeoxyribonuclease VII large subunit [Vibrio sp. MED222]
 gi|85836573|gb|EAQ54699.1| exodeoxyribonuclease VII large subunit [Vibrio sp. MED222]
          Length = 448

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 2   TNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P+ G + LV  +++ +     YQ+IIES+ P G G L    EK K  L  
Sbjct: 61  RGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLKMNLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  PK + VITS TGA + DIL  +  R P L VI++P  VQG+    
Sbjct: 121 EGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQGEGASI 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N   E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 181 QIAQAIGRANERNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H + +  +  ARL + I  ++  +  +  
Sbjct: 235 HEVDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRARLVSAIRHVLIKQAQSTQ 294

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +L   L   +    L     +LD L   L   +   + +  +      ++++ +  +  +
Sbjct: 295 TLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNSPVKRL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + + H+   +Q                                               +
Sbjct: 355 GEQKLHLQRSEQ-----------------------------------------------K 367

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +   + +    +++    L++ +   TLKRGY+     ++  ++   ++     I 
Sbjct: 368 LLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEIGEVIT 427

Query: 487 INFFDGQANAIVINKAPPKE 506
               DG   + V  +    E
Sbjct: 428 TQVEDGVIESQVTTRVAKSE 447


>gi|89073114|ref|ZP_01159653.1| exodeoxyribonuclease VII large subunit [Photobacterium sp. SKA34]
 gi|89051067|gb|EAR56524.1| exodeoxyribonuclease VII large subunit [Photobacterium sp. SKA34]
          Length = 449

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 57/502 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  FS ++  +   Y+VS L+  ++ ++E+ +  V + GE+S +  +  SGH YF+LKD+
Sbjct: 1   MTTFSPQSQKNSRIYTVSSLNAQVRLVLENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG+   + F P  G + LV  +++ +     YQ+IIES+ P G G L    
Sbjct: 60  RAQVKCAMFKGSNRHVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K  L  EGLF+   K  +P  PK + +ITS TGA + DILQ +  R P L ++I+P 
Sbjct: 120 EQLKMSLAAEGLFAQSLKQTLPEQPKRVGIITSKTGAALHDILQVLQRRDPSLPIVIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     IA AI + N  +E       D++I+ RGGGS+EDLW FN+E++ R IA S
Sbjct: 180 MVQGEGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+      H    L   + +L + I   
Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLARKKQQLRHAIRSY 293

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +   +     L   L   +    L+  +  LD + + L   ++  I +  +H +    +I
Sbjct: 294 LSQSLRQATQLQHRLERQHPQLRLNQQQQHLDEISQRLVQAMQKKIQKHQQHIDSNNYKI 353

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   I   ++++   ++                                       
Sbjct: 354 SLYSPATLISNAQRNLERSERR-------------------------------------- 375

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                    +   L  K+ +    +++    L++ +   TL RGY+  ++   + I    
Sbjct: 376 ---------LYDALDRKLLNAKHKLAVIAEKLETVSPLATLARGYSITRNEQGDVIRNTS 426

Query: 478 NLATKTRILINFFDGQANAIVI 499
            +    +++    DG  ++ VI
Sbjct: 427 QVKHGDKLITTVTDGDIHSSVI 448


>gi|312173193|emb|CBX81448.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC
           BAA-2158]
          Length = 457

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/513 (27%), Positives = 234/513 (45%), Gaps = 59/513 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ    +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSQAPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDSAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV   IT +     YQ+I ES++P+G G L    E+ 
Sbjct: 58  VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMLPAGDGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L+ EGLF  +HK P+P   + + VITS +GA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQRLMAEGLFEQRHKQPLPDPARQVGVITSASGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P  I  AI   N   E       D++I+ RGGGS+EDL  FNDE + RAI  S IP
Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLCSFNDERVARAIFASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +      L + + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQTERLRQLQSQQQRMEMAMDYYLAR 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +  T   L   L      L  +R +    +L R L   L+  + +  R   H+  R+ + 
Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMQLQRRLGDALQQHLRQATRRQQHLGQRLNAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  Q + + Q  + Q ++                                   
Sbjct: 352 RPELRIERASQQLQQWQYRLRQAMQ----------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                        ++ +           L+  +   TL RG++     +   + + R L 
Sbjct: 377 ------------QQLGANKQRFGQLAARLEGVSPLATLARGFSVTSTADGQLVKKTRQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
               +     DG   + V    P K+   +  +
Sbjct: 425 QGDTLKTRLDDGWVESEVTVITPLKKTRGRSVK 457


>gi|218532089|ref|YP_002422905.1| exodeoxyribonuclease VII large subunit [Methylobacterium
           chloromethanicum CM4]
 gi|218524392|gb|ACK84977.1| exodeoxyribonuclease VII, large subunit [Methylobacterium
           chloromethanicum CM4]
          Length = 523

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 201/550 (36%), Positives = 285/550 (51%), Gaps = 69/550 (12%)

Query: 2   NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            P        + PE+SV +L+  LK  +E    HV +RGEI+GYRG H SGHAYFSLKD 
Sbjct: 21  EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++IDA++WKG L ++   P+EG+E +  GKITTF G S YQI+I+S+ P+G G  +  L
Sbjct: 81  SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF  + K PIPF+P++I V+TSPTGAVIRDIL R+  RFP  V+++PV+
Sbjct: 141 EERKRQLAAEGLFEAERKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   +EIA AI   N L      PRPD++I+ARGGGSIEDLW FN+E +VRA A S 
Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+  L + +  L AR    ++R I
Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +     +L++A+P +D  L+  R RLD                       + +     
Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L  N + +R+ +      + +      R   +   E  A L  +  + +  +  +    
Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +   T +L + +YK  L RGY  ++D +   +      A
Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453

Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKREK-------------- 521
              R  + F DG   A          APP  +  +          +              
Sbjct: 454 RAARFQLQFADGAIFARPEEAPDDPVAPPLAEAPRSAPRPKRAPRRAAPEPAPKPEKAAA 513

Query: 522 --QGTQGELF 529
                QG LF
Sbjct: 514 EPAARQGSLF 523


>gi|308187761|ref|YP_003931892.1| Exonuclease VII, large subunit [Pantoea vagans C9-1]
 gi|308058271|gb|ADO10443.1| Exonuclease VII, large subunit [Pantoea vagans C9-1]
          Length = 457

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/508 (27%), Positives = 230/508 (45%), Gaps = 57/508 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
                 ++VS L+  ++ ++E  +  V +  EIS +    +SGH YF+LKD+ +++   +
Sbjct: 4   PSTANIFTVSRLNTTVRQLLEKEMGLVWISAEISNFT-QPASGHWYFTLKDDGAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E  K KL 
Sbjct: 63  FRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIAESMHPAGEGLLQQQFELLKAKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  QHK P+P   + + VITS TGA + D+L+ +  R P L V+I+P  VQG + P
Sbjct: 123 SEGLFEPQHKQPLPEPARQVGVITSSTGAALHDVLRVMHRRDPSLPVVIYPTVVQGADAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+
Sbjct: 183 AAIVRAIEIANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  +    
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRLY 296

Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R +    RL + L   +E  + +  R  + + +R+ +      
Sbjct: 297 TRLEHRLQQQHPQLRLARQQTALFRLQQRLGEAMETRLRQATRQQDRLAHRLNAQQPQQR 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + ++ +      ++Q                                           
Sbjct: 357 LFQAQKQLQSWHYRLQQS------------------------------------------ 374

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                ++ ++ +           L+  +   TL RG++   DT    + +   L +   +
Sbjct: 375 -----MATQLSNNKQQFGQLVAQLEGVSPLATLARGFSVTTDTAGQVVKKTAQLQSGDLL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513
                DG   + V    P K++  K   
Sbjct: 430 RTRLDDGWVESQVTQLLPEKKRRRKTAS 457


>gi|301155949|emb|CBW15419.1| exonuclease VII, large subunit [Haemophilus parainfluenzae T3T1]
          Length = 439

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSENIYSVSQLNSAARQMLEGSFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRGAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E  K KL  
Sbjct: 60  RMKNLRVGFRPQNGMQVLVRANVSLYESRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + ++TS TGA ++DIL  ++ R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQNLKKSLPEFAKAVGIVTSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S++PIISA+G
Sbjct: 180 EIVQIIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSNLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L   + RL   + R+  ++   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKQQRLEMALDRIFSHQQQRLQ 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + R ++L   L   ++  + +  +    +  R+K + L + +
Sbjct: 294 QLRLRLQNQHPQNQLLMQKARTEQLHHRLVLAMQRQVDKTQQKLTALSARLKQNPLPYRL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           QK  Q++ + Q                                                 
Sbjct: 354 QKQSQYLAQLQVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +    + ++      ++     L   +    L RGY+  +D   + I   + + T   I 
Sbjct: 367 LNLGANRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAEDVKGHAIVSVKQVKTGDTIK 426

Query: 487 INFFDGQANAIV 498
               DG+  + V
Sbjct: 427 TKVADGEITSRV 438


>gi|209694325|ref|YP_002262253.1| exodeoxyribonuclease VII large subunit [Aliivibrio salmonicida
           LFI1238]
 gi|226694633|sp|B6EGZ4|EX7L_ALISL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|208008276|emb|CAQ78421.1| exodeoxyribonuclease VII large subunit [Aliivibrio salmonicida
           LFI1238]
          Length = 444

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/493 (27%), Positives = 235/493 (47%), Gaps = 57/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GE+S       SGH Y +LKD+ +++   ++
Sbjct: 5   SNPRIFTVSRLNSEVRLLLENEMGIVWLVGEVSNLTM-PVSGHWYLTLKDSQAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG   ++ F P+ G + LV  +++ +     YQ+IIES+   G G L    +  K  L  
Sbjct: 64  KGNNRRVTFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQAEGDGRLQQEFDHLKMSLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  PK + +ITS TGA + DIL  +  R P L VII+P  VQG     
Sbjct: 124 EGLFAQTAKKALPEQPKCVGIITSKTGAALFDILNVLKRRDPNLPVIIYPTLVQGTNAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G
Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASQIPIVSAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+           + + + RL + I R +  +   L+
Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSSQLQIVSHQKRRLRSAIERYLSQQQKRLS 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +    +   +    L+    RLD L + LE++++  + R      ++  R+ +      +
Sbjct: 298 TYQFRIEKQHPQLQLNTQSQRLDDLNQRLENHIQQRLERNQHKIENLSLRLSNLSPARKV 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +++Q I   ++ +                                              
Sbjct: 358 HQDKQRIETLKRRLL--------------------------------------------- 372

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +   +      +++    L + +   TLKRGY+  ++ + + IT  + + T   I 
Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLKRGYSITRNASGSLITSTQQVHTGDTIT 430

Query: 487 INFFDGQANAIVI 499
             F DG+  + V 
Sbjct: 431 TRFVDGEVQSTVD 443


>gi|260914446|ref|ZP_05920915.1| exodeoxyribonuclease VII [Pasteurella dagmatis ATCC 43325]
 gi|260631547|gb|EEX49729.1| exodeoxyribonuclease VII [Pasteurella dagmatis ATCC 43325]
          Length = 457

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/511 (28%), Positives = 245/511 (47%), Gaps = 57/511 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+  ++ ++E+ L +V + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSEQIYSVSQLNQTVRVMLENQLGYVWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ L    ++ +     YQ+IIES+ P+G G L    E  K KL  
Sbjct: 60  RMKNMRVNFRPQNGMQVLARASVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + ++TS TGA ++DIL  +  R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQHLKKNLPHFSKAVGIVTSKTGAALQDILHILQRRDPSLKVVIYPTAVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI NS+IP+ISA+G
Sbjct: 180 EIVQMIELANQRQE------VDVLIVGRGGGSLEDLWCFNEESVARAIFNSTIPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L     RL   + RL   K+  L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKRQRLEMALDRLFNDKLQYLQ 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + ++ +L   L   ++ ++ +K      +  R++ + L  N+
Sbjct: 294 RLRLRLQHKHPQTQLQVQKQQMSQLSHRLVLAIKTLVNKKQDKLTALSTRVQKNPLPFNV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           QK +Q+I + +  +  +                                           
Sbjct: 354 QKQQQYIHQLELRLHTM------------------------------------------- 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               L+  +       +     L   +    L RGY+  +D     IT+   +    ++ 
Sbjct: 371 ----LNRIVTHKQHQFANLCGRLDGLSPLKVLARGYSIAEDEQGKAITEISQVNVGDKLK 426

Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
               +G+  + VI+     E+ +K  QL +N
Sbjct: 427 TRVANGEIVSEVISIQSFLEKRSKAKQLKSN 457


>gi|127512228|ref|YP_001093425.1| exodeoxyribonuclease VII large subunit [Shewanella loihica PV-4]
 gi|158513470|sp|A3QCG8|EX7L_SHELP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|126637523|gb|ABO23166.1| Exodeoxyribonuclease VII large subunit [Shewanella loihica PV-4]
          Length = 442

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/491 (29%), Positives = 222/491 (45%), Gaps = 57/491 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ ++E  L  V +  EIS +    SSGH Y +LKDN+++I A ++KG
Sbjct: 6   NNVYTVSRLNGEVRQLLEGELGKVWLEAEISNFSA-PSSGHWYLTLKDNYAQIRAAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ+II+S++P+G G L    E  K KL  EG
Sbjct: 65  RNRAVTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P   + I V+TS TGA IRD+L  +  R P + VII+P +VQG+   K +
Sbjct: 125 LFAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKSL 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +AI+Q N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CHAIMQANDRME------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY ADLRAPTP+ AAE+           L     RL          +    + L
Sbjct: 239 VDTTISDYVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQRFSQL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      + L     R D L   L   L   + +  R    +  R+      H +  
Sbjct: 299 HHRLERQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLAL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +  + Q +   +                                            
Sbjct: 359 AASRLTHQNQRLHSAM-------------------------------------------- 374

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                ++ S   S+      L++ +   TL RGY+   DT    +   +++ T  R+   
Sbjct: 375 ---QARLNSAEKSLQYAAHQLETVSPLATLSRGYSITLDTEGKVLHSAQDVRTGARLTTK 431

Query: 489 FFDGQANAIVI 499
             DG+  + VI
Sbjct: 432 LVDGEVQSTVI 442


>gi|61212678|sp|Q7MNE3|EX7L_VIBVY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 443

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/495 (29%), Positives = 238/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ L  V + GEIS +     SGH YF+LKD+ +++  
Sbjct: 2   SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G    + F P  G + LV  +++ +     YQ+IIES+ P G G L    +  K K
Sbjct: 61  AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K  IP  PK + +ITS TGA + DIL  +  R P L V+I+P  VQG+E
Sbjct: 121 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ ADLRAPTP+ AAE+      H   +LI+ E +L       +  +  
Sbjct: 235 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALISREQKLRAAWRHYLTEQNR 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           T+ SL   L   +    L     + D L   L+  +E  + ++ +  + + ++++    +
Sbjct: 295 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +Q +   +                                       
Sbjct: 355 RQISEQKNALARVEQKMMDAM--------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     K+      ++I    L + +   TLKRGY+  Q  +   IT++  + T  
Sbjct: 376 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGEVITRQSQIKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLSDGEIRSTV 442


>gi|27363888|ref|NP_759416.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus CMCP6]
 gi|320157266|ref|YP_004189645.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus MO6-24/O]
 gi|31563122|sp|Q8DF05|EX7L_VIBVU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|27360005|gb|AAO08943.1| exodeoxyribonuclease VII, large subunit [Vibrio vulnificus CMCP6]
 gi|319932578|gb|ADV87442.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus MO6-24/O]
          Length = 443

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 57/495 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +  +   ++VS L+  ++ ++E+ L  V + GEIS +     SGH YF+LKD+ +++  
Sbjct: 2   SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G    + F P  G + LV  +++ +     YQ+IIES+ P G G L    +  K K
Sbjct: 61  AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K  IP  PK + +ITS TGA + DIL  +  R P L V+I+P  VQG+E
Sbjct: 121 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS
Sbjct: 181 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+AD+ ADLRAPTP+ AAE+      H   +L++ E +L       +  +  
Sbjct: 235 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALMSREQKLRAAWRHYLTEQNR 294

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           T+ SL   L   +    L     + D L   L+  +E  + ++ +  + + ++++    +
Sbjct: 295 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +Q +   +                                       
Sbjct: 355 RQISEQKNALARVEQKMMDAM--------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     K+      ++I    L + +   TLKRGY+  Q  + + IT++  + T  
Sbjct: 376 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGDVITRQSQIKTGD 427

Query: 484 RILINFFDGQANAIV 498
            ++    DG+  + V
Sbjct: 428 TLVTRLSDGEIRSTV 442


>gi|229192392|ref|ZP_04319355.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 10876]
 gi|228590969|gb|EEK48825.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 10876]
          Length = 452

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKMNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|229019399|ref|ZP_04176222.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1273]
 gi|228741869|gb|EEL92046.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1273]
          Length = 452

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEVVARAIFTSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    LQ  ++    RL   +   +  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNVLELQEKVLQRTLRLQRAMRERVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAIETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     ++    +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQMKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V +  
Sbjct: 427 VSVQLQDGILDCSVSSIE 444


>gi|196041561|ref|ZP_03108853.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus
           NVH0597-99]
 gi|196027549|gb|EDX66164.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus
           NVH0597-99]
          Length = 452

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQIYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|322831778|ref|YP_004211805.1| exodeoxyribonuclease VII, large subunit [Rahnella sp. Y9602]
 gi|321166979|gb|ADW72678.1| exodeoxyribonuclease VII, large subunit [Rahnella sp. Y9602]
          Length = 457

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/508 (27%), Positives = 228/508 (44%), Gaps = 57/508 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
               P ++VS L+  ++ ++E+ +  V + GEIS +    SSGH YF+LKD+ +++   +
Sbjct: 4   PSSPPIFTVSRLNQTVRQLLENEMGQVWLSGEISNF-SQPSSGHWYFTLKDDRAQVKCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ T  +  F P+ G + LV   IT +     YQ+I ES+  +G G L    +  K++L 
Sbjct: 63  FRNTNRRTTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQEAGDGLLQQKFDLLKQQLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  Q K P+P   K + VITS +GA + D+L  +  R P L VII+P  VQG + P
Sbjct: 123 AEGLFDAQFKQPLPSPAKCVGVITSASGAALHDVLNVLKRRDPSLPVIIYPTSVQGADAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+
Sbjct: 183 GQIVRAIELANAREE------VDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + + + RL   +   +       
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELISRNQLELLRQIQSQQQRLEMAMDYYLAQLTQRF 296

Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R +    +L R L+  ++  + +  R  + +  R+        
Sbjct: 297 TRLNHRLQQQHPHLRLARQQTALFKLRRRLDEAMQNQLRQMLRRTDRLQQRLTQQQPQPR 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I + +Q + + Q  ++Q                                           
Sbjct: 357 IHRAQQRVQQLQYRLQQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +S ++             L+  +   TL RGY+         + +    A    +
Sbjct: 374 ----AMSSQLTESRQRFGTACTQLEGVSPLATLARGYSVTTTPQGALLKKTTQTAPGDTL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513
                DG   + V +    K+   +  +
Sbjct: 430 KTRLADGWIESEVKSIVVEKKVRKRAVK 457


>gi|289824929|ref|ZP_06544338.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 449

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/489 (29%), Positives = 224/489 (45%), Gaps = 57/489 (11%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           S L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   +++ +  ++ 
Sbjct: 13  SRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVT 71

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137
           F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL  EGLF  QH
Sbjct: 72  FRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLHAEGLFDQQH 131

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196
           K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ P +I  AI  
Sbjct: 132 KQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIEL 191

Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256
            NT  E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+GHETD T+A
Sbjct: 192 ANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIA 245

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   +  +      +   L  
Sbjct: 246 DFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQ 305

Query: 317 SDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
               L  +R +   +RL + +   LE  I +  +    +  R+        I + +  I 
Sbjct: 306 QHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQ 365

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           + +                                                 +   +  +
Sbjct: 366 QLEYR-----------------------------------------------LTENIRSR 378

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           +             L++ +   TL RGYT    T+   + + + +     +     DG  
Sbjct: 379 LSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWL 438

Query: 495 NAIVINKAP 503
            + V +  P
Sbjct: 439 ESEVKSVTP 447


>gi|49480925|ref|YP_038241.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52141317|ref|YP_085513.1| exodeoxyribonuclease VII large subunit [Bacillus cereus E33L]
 gi|118479371|ref|YP_896522.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis str.
           Al Hakam]
 gi|196046399|ref|ZP_03113625.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB108]
 gi|218905316|ref|YP_002453150.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH820]
 gi|228929226|ref|ZP_04092253.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935503|ref|ZP_04098321.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228947897|ref|ZP_04110184.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229093239|ref|ZP_04224357.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-42]
 gi|229123700|ref|ZP_04252895.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 95/8201]
 gi|229186423|ref|ZP_04313587.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BGSC 6E1]
 gi|81824192|sp|Q635A4|EX7L_BACCZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81828207|sp|Q6HDY5|EX7L_BACHK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158512496|sp|A0RIH2|EX7L_BACAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694634|sp|B7JM31|EX7L_BACC0 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|49332481|gb|AAT63127.1| exodeoxyribonuclease VII, large subunit [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51974786|gb|AAU16336.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus E33L]
 gi|118418596|gb|ABK87015.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis str.
           Al Hakam]
 gi|196022869|gb|EDX61550.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB108]
 gi|218539843|gb|ACK92241.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH820]
 gi|228597050|gb|EEK54706.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BGSC 6E1]
 gi|228659835|gb|EEL15480.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 95/8201]
 gi|228690213|gb|EEL44007.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-42]
 gi|228811884|gb|EEM58218.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228824255|gb|EEM70069.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830516|gb|EEM76126.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 452

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|218231815|ref|YP_002368983.1| exodeoxyribonuclease VII large subunit [Bacillus cereus B4264]
 gi|229152382|ref|ZP_04280574.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1550]
 gi|226694636|sp|B7HB51|EX7L_BACC4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218159772|gb|ACK59764.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus B4264]
 gi|228630990|gb|EEK87627.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1550]
          Length = 452

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|310764765|gb|ADP09715.1| exodeoxyribonuclease VII large subunit [Erwinia sp. Ejp617]
          Length = 456

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/511 (28%), Positives = 232/511 (45%), Gaps = 59/511 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ    +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSQPPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ 
Sbjct: 58  VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L+ EGLF   HK P+P   + + VITS +GA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQRLMAEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P  I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP
Sbjct: 178 GAEAPPGIVRAIELANVRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +      L + + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIERLRQLQSQQQRMEMAMDYYLAQ 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +  T   L   L      L  +R +     L R L+  L+  + R  R    +  R+ + 
Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMILQRRLDDALQQHLRRAARRQEILGQRLNAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  Q + + Q  ++Q ++                                   
Sbjct: 352 RPEIRIERASQQLQQWQYRLQQAMQ----------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                        ++ +           L+  +   TL RG++     +   I + R L 
Sbjct: 377 ------------QQLGTGKQHFGQLAARLEGVSPLATLARGFSVTSTADGQVIKKTRQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511
               +     DG   + V    P K+   + 
Sbjct: 425 RGDTLKTRLDDGWVESEVTAITPLKKTRGRS 455


>gi|30022262|ref|NP_833893.1| exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 14579]
 gi|206971365|ref|ZP_03232316.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH1134]
 gi|218899344|ref|YP_002447755.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9842]
 gi|228922935|ref|ZP_04086229.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228954466|ref|ZP_04116491.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228967221|ref|ZP_04128257.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|229047876|ref|ZP_04193452.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH676]
 gi|229071687|ref|ZP_04204903.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus F65185]
 gi|229081439|ref|ZP_04213939.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-2]
 gi|229129460|ref|ZP_04258431.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-Cer4]
 gi|229146755|ref|ZP_04275120.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST24]
 gi|229180460|ref|ZP_04307802.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 172560W]
 gi|296504669|ref|YP_003666369.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           BMB171]
 gi|81837301|sp|Q818R6|EX7L_BACCR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694635|sp|B7IXH1|EX7L_BACC2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|29897819|gb|AAP11094.1| Exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 14579]
 gi|206734137|gb|EDZ51308.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH1134]
 gi|218544494|gb|ACK96888.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9842]
 gi|228602884|gb|EEK60363.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 172560W]
 gi|228636583|gb|EEK93048.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST24]
 gi|228654065|gb|EEL09932.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-Cer4]
 gi|228701854|gb|EEL54340.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-2]
 gi|228711418|gb|EEL63377.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus F65185]
 gi|228723333|gb|EEL74702.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH676]
 gi|228792590|gb|EEM40156.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228805123|gb|EEM51717.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228836706|gb|EEM82053.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|296325721|gb|ADH08649.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           BMB171]
          Length = 452

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|228916816|ref|ZP_04080381.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228843003|gb|EEM88086.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 452

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I V+TSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVVTSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|229174857|ref|ZP_04302377.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus MM3]
 gi|228608525|gb|EEK65827.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus MM3]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRD++  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDVITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPAQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|242240148|ref|YP_002988329.1| exodeoxyribonuclease VII large subunit [Dickeya dadantii Ech703]
 gi|242132205|gb|ACS86507.1| exodeoxyribonuclease VII, large subunit [Dickeya dadantii Ech703]
          Length = 465

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/513 (26%), Positives = 228/513 (44%), Gaps = 57/513 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              ++VS L+  +K ++ES +  + + GEIS +    +SGH YF+LKD  +++   +++ 
Sbjct: 7   SAIFTVSRLNQTVKQLLESEMGLIWLSGEISNF-SQPASGHWYFTLKDERAQVRCAMFRT 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +  ++ F P+ G + L+   +T +     YQ++ +S+ P+G G L    E  K++L  EG
Sbjct: 66  SNRRVVFRPQNGQQVLIRASVTLYEPRGDYQLLADSMHPAGDGLLQQQFEHLKQRLSAEG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  QHK P+P     I VITS +GA + DILQ +  R P L V+++P  VQG E P +I
Sbjct: 126 LFDQQHKQPLPKPAYRIGVITSASGAALHDILQVLQRRDPSLPVVVYPTAVQGVEAPLQI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S+IPI+SA+GHE
Sbjct: 186 VRAIELANQRQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASNIPIVSAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD+ ADLRAPTP+ AAE+    +  L   L     RL+  +   +       + L
Sbjct: 240 IDVTIADFVADLRAPTPSAAAELVSRDQTELLRRLQTQRQRLDMAMDYYLAQCQQRFSRL 299

Query: 311 LKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      L  +R +    RL + L+  ++  + +  R       R+        + +
Sbjct: 300 HHRLQQQHPQLRLARQQTQLIRLSQRLDEAMQQQLRQTQRRQERAFQRLMQQQPQPRLHR 359

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             Q + + +  ++ +                                             
Sbjct: 360 AHQQLQQLRYRLQSL--------------------------------------------- 374

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             L  ++             L++ +   TL RGY+     +   +TQ R  +    +   
Sbjct: 375 --LEKQLGQQKQRFGELCSHLEAVSPLATLARGYSVTTAADGQVLTQTRQASLGDTLKTR 432

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
             DG   + + +          K +    K   
Sbjct: 433 LQDGWVESRITDVQALSSSIAPKRRSKTRKTTD 465


>gi|251788756|ref|YP_003003477.1| exodeoxyribonuclease VII large subunit [Dickeya zeae Ech1591]
 gi|247537377|gb|ACT05998.1| exodeoxyribonuclease VII, large subunit [Dickeya zeae Ech1591]
          Length = 461

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/519 (26%), Positives = 232/519 (44%), Gaps = 62/519 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+            ++VS L+  +K ++E  +  V + GEIS +    SSGH YF+LKD 
Sbjct: 1   MSSLPSSA-----IFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  ++ F P+ G + L+   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K++L  EGLF  Q+K  +P   + + VITS +GA + DIL  +  R P L V+I+P 
Sbjct: 115 EQLKQRLSAEGLFDQQYKQSLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG + P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 AVQGVDAPGQIVRAIELANRREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + +   RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRI 357
           + ++      L   L      L  +R +    RL + L+  +++ +  + R    ++ R+
Sbjct: 289 LAHRQQQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDEAIQLQLRLRMRRQERLVQRL 348

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +       + + +Q + + +  I+                                    
Sbjct: 349 QQHQPQSRLHRAQQQVQQLRYRIQ------------------------------------ 372

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        L  ++             L++ +   TL RGY+     +   + Q  
Sbjct: 373 -----------HALEKQLNQHKQRFGEACSHLEAVSPLATLARGYSVTTAPDGKVMKQTA 421

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
            +     +     DG   + V        +   K Q  N
Sbjct: 422 QITKGDILKTRLQDGWVESQVTEIKKESTKSRTKRQTKN 460


>gi|30264255|ref|NP_846632.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Ames]
 gi|47529698|ref|YP_021047.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49187082|ref|YP_030334.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Sterne]
 gi|65321565|ref|ZP_00394524.1| COG1570: Exonuclease VII, large subunit [Bacillus anthracis str.
           A2012]
 gi|165872985|ref|ZP_02217607.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0488]
 gi|167634492|ref|ZP_02392812.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0442]
 gi|167638588|ref|ZP_02396864.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0193]
 gi|170687494|ref|ZP_02878711.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0465]
 gi|170709012|ref|ZP_02899442.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0389]
 gi|177654828|ref|ZP_02936585.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0174]
 gi|190566009|ref|ZP_03018928.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis
           Tsiankovskii-I]
 gi|227816956|ref|YP_002816965.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           CDC 684]
 gi|229604498|ref|YP_002868474.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0248]
 gi|254683944|ref|ZP_05147804.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721779|ref|ZP_05183568.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           A1055]
 gi|254736292|ref|ZP_05193998.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741330|ref|ZP_05199017.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Kruger B]
 gi|254754036|ref|ZP_05206071.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Vollum]
 gi|254757907|ref|ZP_05209934.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str.
           Australia 94]
 gi|81837607|sp|Q81M51|EX7L_BACAN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783687|sp|C3P7V9|EX7L_BACAA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783688|sp|C3LJV4|EX7L_BACAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|30258900|gb|AAP28118.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           Ames]
 gi|47504846|gb|AAT33522.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49181009|gb|AAT56385.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           Sterne]
 gi|164711268|gb|EDR16823.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0488]
 gi|167513436|gb|EDR88806.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0193]
 gi|167529944|gb|EDR92679.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0442]
 gi|170126039|gb|EDS94936.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0389]
 gi|170668689|gb|EDT19435.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0465]
 gi|172080489|gb|EDT65575.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0174]
 gi|190562928|gb|EDV16894.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis
           Tsiankovskii-I]
 gi|227004511|gb|ACP14254.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           CDC 684]
 gi|229268906|gb|ACQ50543.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str.
           A0248]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQAKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|271501563|ref|YP_003334589.1| exodeoxyribonuclease VII large subunit [Dickeya dadantii Ech586]
 gi|270345118|gb|ACZ77883.1| exodeoxyribonuclease VII, large subunit [Dickeya dadantii Ech586]
          Length = 462

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/519 (26%), Positives = 231/519 (44%), Gaps = 62/519 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+            ++VS L+  +K ++E  +  V + GEIS +    SSGH YF+LKD 
Sbjct: 1   MSSLPSSA-----IFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  ++ F P+ G + L+   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K++L  EGLF   +K  +P   + + VITS +GA + DIL  +  R P L V+I+P 
Sbjct: 115 EQLKQRLSAEGLFDQHYKQLLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG + P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 AVQGVDAPGQIVRAIELANLREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +     RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIRAQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +      L   L      L  +R +    RL + L+  +++ + ++ R    +  R+
Sbjct: 289 LAQRQQQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDDAIQLQLRQQTRRQERLAQRL 348

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +       + + +Q I + +  +                                     
Sbjct: 349 QQHQPQSRLHRAQQQIQQLRYRMH------------------------------------ 372

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        L  ++             L++ +   TL RGY+    ++   + Q  
Sbjct: 373 -----------HALEKQLSQYKQQFGEACSHLEAVSPLATLARGYSVTTTSDGKVMKQTV 421

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
            +    ++     DG   + V        +P  K Q  N
Sbjct: 422 QVTKGDKLKTRLQDGWVESQVTEIKKESTKPRAKRQPKN 460


>gi|196034996|ref|ZP_03102403.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus W]
 gi|195992535|gb|EDX56496.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus W]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRAIEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|270264717|ref|ZP_06192982.1| exodeoxyribonuclease 7 large subunit [Serratia odorifera 4Rx13]
 gi|270041400|gb|EFA14499.1| exodeoxyribonuclease 7 large subunit [Serratia odorifera 4Rx13]
          Length = 461

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/503 (27%), Positives = 228/503 (45%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++   +++ + 
Sbjct: 9   IFTVSRLNQTVRQLLEMEMGQIWLSAEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNSN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++L  EGLF
Sbjct: 68  RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQRLSAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             Q K P+P   K + VITS +GA + D+LQ +  R P L ++I+P  VQG E P +I  
Sbjct: 128 DQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIVIYPTSVQGAEAPLQIVR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD
Sbjct: 188 AIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRAPTP+ AAE+    +  L   L + + R+   +   +  +      +  
Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRINH 301

Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R +    +L R LE  ++  +    R  +    R+        I + +
Sbjct: 302 RLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSDRAQQRLAQVQPQARIHRYQ 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + +++  ++Q                                                
Sbjct: 362 QRVQQQEYRLQQ-----------------------------------------------A 374

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L  ++ +      +    L++ +   TL RGY+  Q      +   +       +     
Sbjct: 375 LERRLNAYRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTTKQAQVGELLKTRLQ 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513
           DG   + V      K+   K+  
Sbjct: 435 DGWVESEVKTITVAKKPRKKRAA 457


>gi|228902698|ref|ZP_04066845.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL
           4222]
 gi|228856885|gb|EEN01398.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL
           4222]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKDEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|149375100|ref|ZP_01892872.1| exodeoxyribonuclease VII, large subunit [Marinobacter algicola
           DG893]
 gi|149360464|gb|EDM48916.1| exodeoxyribonuclease VII, large subunit [Marinobacter algicola
           DG893]
          Length = 451

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/490 (30%), Positives = 226/490 (46%), Gaps = 55/490 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL++  +H++E++   V V GE+SG+    SSGH YFSLKD   +I   +++G   
Sbjct: 13  LSVSELNHQARHLLEASFMQVWVEGELSGF-SRPSSGHWYFSLKDRKCQIRCAMFRGFNQ 71

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +++ +P+EG +  + GK+T +     +QII+E + P+G G L  A E+ K+KL  EGLF 
Sbjct: 72  RVKEIPKEGEQVRIRGKVTLYENRGDFQIIVEHVEPAGLGALQQAYEELKRKLQMEGLFD 131

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K P+P  P+ I V+TSPTGA I DIL  ++ R P + V ++P  VQG     +I  A
Sbjct: 132 AARKKPLPSTPRHIGVVTSPTGAAIHDILTVLARRCPAIPVTLYPTAVQGQAATSDIVRA 191

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I +             D++I+ RGGGS+EDLW FN+E + RAIA   +P +SA+GHE D 
Sbjct: 192 IDRAAR------HGVADVLIIGRGGGSLEDLWCFNEEAVARAIAACPLPTVSAVGHEVDV 245

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+AD+ ADLRAPTP+ AAE   P ++     L   E RL     R +K     L  L   
Sbjct: 246 TIADFVADLRAPTPSAAAEKISPDQQDWLRQLRERERRLAGAASRALKRMGTQLEHLSAR 305

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  + L     R+D L   L   +   I R+     H+  R++       +  NR+ +
Sbjct: 306 LRDPRRELMEKAQRMDDLDLRLGKAMRQRIERENVRTEHLGQRLRMQSPAKRLNDNRRSV 365

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            +  + + ++                          +  +      +             
Sbjct: 366 SQLSERLARV-------------------------ARQSVVQRQERL------------- 387

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                        + L   +   TL RGY  +Q  N N + Q   L    RI      G 
Sbjct: 388 ---------EHLAQTLHVVSPLATLGRGYAIVQQENGNIVRQASELVPGDRITARVASGH 438

Query: 494 ANAIVINKAP 503
             A V     
Sbjct: 439 LEANVTAVKS 448


>gi|229075888|ref|ZP_04208864.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-18]
 gi|229104808|ref|ZP_04235469.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-28]
 gi|228678681|gb|EEL32897.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-28]
 gi|228707203|gb|EEL59400.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-18]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNVIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ +++ +                                        
Sbjct: 354 KIIQTKVAIETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|291618403|ref|YP_003521145.1| XseA [Pantoea ananatis LMG 20103]
 gi|291153433|gb|ADD78017.1| XseA [Pantoea ananatis LMG 20103]
          Length = 464

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/506 (27%), Positives = 228/506 (45%), Gaps = 57/506 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +   ++VS L+  ++ ++E+ +  V +  EIS +    +SGH YF+LKD+ +++   +
Sbjct: 11  PPNANIFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQVRCAM 69

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    ++ F P+ G + LV   IT +     YQ+IIES+ P+G G L    E+ K +L 
Sbjct: 70  FRNGNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKARLA 129

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF  +HK P+P   K + V+TS TGA + D+L+ +  R P L V+I+P  VQG + P
Sbjct: 130 QEGLFEPEHKKPLPQPAKQVGVVTSATGAALHDVLRVLHRRDPSLPVVIYPTAVQGVDAP 189

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+
Sbjct: 190 AAIVRAIELANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 243

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  +    
Sbjct: 244 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRVF 303

Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      L  +R +    RL + L   +E  +    R  + +  R+        
Sbjct: 304 SRLDHRLQQQHPQLRLARQQTALFRLQQRLGEAMEQRLRNATRQQDRLSQRLAQQQPQQR 363

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +      ++Q +                                         
Sbjct: 364 LYLTQKSLQSWHYRLQQSM----------------------------------------- 382

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                    +             L+  +   TL RG++   D     + + R ++T   +
Sbjct: 383 ------EKLLNRDKNRFGQLAAQLEGVSPLATLARGFSVTTDNAGQVVKKTRQVSTGDLL 436

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + V    P K +  K 
Sbjct: 437 RTRLDDGWVESQVTQLIPEKPKRKKS 462


>gi|228960448|ref|ZP_04122099.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228799212|gb|EEM46178.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 452

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFQSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|119775494|ref|YP_928234.1| exodeoxyribonuclease VII large subunit [Shewanella amazonensis
           SB2B]
 gi|158513091|sp|A1S858|EX7L_SHEAM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|119767994|gb|ABM00565.1| Exodeoxyribonuclease VII large subunit [Shewanella amazonensis
           SB2B]
          Length = 447

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/494 (29%), Positives = 224/494 (45%), Gaps = 57/494 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E  L  + + GEIS +    SSGH Y +LKD+HS++   ++KG  
Sbjct: 8   VYTVSRLNGEVRQLLEGQLGRIWLTGEISNFSS-PSSGHWYLTLKDSHSQLRCAMFKGRN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P  G + LV G I+ +     YQ++IE++ P+G G L    E  K KL  EGLF
Sbjct: 67  TTVAFKPINGQQVLVRGSISVYEPRGDYQLLIEAMFPAGDGLLAAQFEALKMKLAAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +   K P+P   + I VITSPTGA IRD+L  +  R P + V+I+P  VQG    K+I  
Sbjct: 127 AQDTKRPLPESIQRIGVITSPTGAAIRDVLHVLKRRDPSVEVVIYPTAVQGTGADKDIIR 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D+++L RGGGS+EDLW FN E +  AI NS++ I+SA+GHE D
Sbjct: 187 AIELANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHAIYNSTLTIVSAVGHEVD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++AD+ AD+RAPTP+  AE+    + H Q  L    ARL          + + L SL  
Sbjct: 241 TSIADFVADVRAPTPSAGAELLSGDQSHKQQKLAGALARLTQGWRHYALKRHSGLISLQS 300

Query: 313 ALPNSDQT--LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   D    L     RLD L   L  +++  +         +  R++       +   +
Sbjct: 301 RLDRQDPKRQLQQQSQRLDELELRLTSSIQRRLSSHTLTTERLKARLERHSPAQRLMMEQ 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +    + +                                               +  
Sbjct: 361 QRLTYLDERL-----------------------------------------------KGA 373

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++   T +   +  L S +   TL RGY+  +D     +TQ  ++ T   I     
Sbjct: 374 MEDRLEDAQTHLGGLSHSLASVSPLATLSRGYSITRDAGGRVLTQASSMKTGDTIETQLE 433

Query: 491 DGQANAIVINKAPP 504
            G   A VI   P 
Sbjct: 434 QGSLLARVIEIKPE 447


>gi|225866162|ref|YP_002751540.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB102]
 gi|254783689|sp|C1ERQ3|EX7L_BACC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|225786828|gb|ACO27045.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB102]
          Length = 452

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTVADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|227328665|ref|ZP_03832689.1| exodeoxyribonuclease VII large subunit [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 464

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/521 (27%), Positives = 230/521 (44%), Gaps = 58/521 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+ F          ++VS L+  ++ ++E  +  + + GEIS      SSGH YF+LKD 
Sbjct: 1   MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  K+ F P+ G + L+   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K++L  EGLF  Q K  +P   K + VITS +GA + DILQ +  R P L VI++P 
Sbjct: 115 EQLKQRLAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 SVQGAEAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+  DLRAPTP+ AAE+    +  L   + +   RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +      L   L      L  +R                                  
Sbjct: 289 LAQRNRDFTRLHHRLQQQHPQLRLARQ--------------------------------- 315

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 + K RQ + +  Q   Q+ +   R   L+++           + + R+      
Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTSRRSERLQQRLMQQQPQTRIHRAQQRL------ 364

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            ++L  +++  +  ++      + I    L+  +   TL RGY      +   +     +
Sbjct: 365 -QQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNVAQI 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520
                +     DG   + V    P  +   K+ +  +   +
Sbjct: 424 TPGETLKTRLQDGWVESQVTTLVPNPDSAKKQRKPSSRTPK 464


>gi|42783299|ref|NP_980546.1| exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 10987]
 gi|47569439|ref|ZP_00240120.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9241]
 gi|217961670|ref|YP_002340240.1| exodeoxyribonuclease VII large subunit [Bacillus cereus AH187]
 gi|222097626|ref|YP_002531683.1| exodeoxyribonuclease vii large subunit [Bacillus cereus Q1]
 gi|229140914|ref|ZP_04269458.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST26]
 gi|229157779|ref|ZP_04285854.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 4342]
 gi|229198307|ref|ZP_04325014.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1293]
 gi|81830971|sp|Q731B3|EX7L_BACC1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694637|sp|B7HNU3|EX7L_BACC7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783690|sp|B9IXH3|EX7L_BACCQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|42739227|gb|AAS43154.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus ATCC
           10987]
 gi|47553854|gb|EAL12224.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9241]
 gi|217066432|gb|ACJ80682.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH187]
 gi|221241684|gb|ACM14394.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus Q1]
 gi|228585186|gb|EEK43297.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1293]
 gi|228625736|gb|EEK82488.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 4342]
 gi|228642490|gb|EEK98777.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST26]
 gi|324328094|gb|ADY23354.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 452

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|229111655|ref|ZP_04241205.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-15]
 gi|228671790|gb|EEL27084.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-15]
          Length = 452

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFQSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|292489037|ref|YP_003531924.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora CFBP1430]
 gi|292900167|ref|YP_003539536.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC
           49946]
 gi|291200015|emb|CBJ47140.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC
           49946]
 gi|291554471|emb|CBA21989.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora CFBP1430]
          Length = 457

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/513 (28%), Positives = 235/513 (45%), Gaps = 59/513 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ    +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSQAPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDSAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV   IT +     YQ+I ES++P+G G L    E+ 
Sbjct: 58  VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMLPAGDGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L+ EGLF  +HK P+P   + + VITS +GA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQRLMAEGLFEQRHKQPLPDPARQVGVITSASGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P  I  AI   N   E       D++I+ RGGGS+EDL  FNDE + RAI  S IP
Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLCSFNDERVARAIFASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+AADLRAPTP+ AAE+    +      L + + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFAADLRAPTPSAAAELVSRNQTERLRQLQSQQQRMEMAMDYYLAR 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +  T   L   L      L  +R +    +L R L   L+  + +  R   H+  R+ + 
Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMQLQRRLGDALQQHLRQATRRQQHLGQRLNAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  Q + + Q  + Q ++                                   
Sbjct: 352 RPELRIERASQQLQQWQYRLRQAMQ----------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                        ++ +           L+  +   TL RG++     N   + + R L 
Sbjct: 377 ------------QQLGANKQRFGQLAARLEGVSPLATLARGFSVTSTANGQLVKKTRQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
               +     DG   + V    P K+   +  +
Sbjct: 425 QGDTLKTRLDDGWVESEVTVITPLKKTRGRSVK 457


>gi|228941341|ref|ZP_04103893.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974273|ref|ZP_04134842.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980866|ref|ZP_04141170.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis Bt407]
 gi|228778802|gb|EEM27065.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis Bt407]
 gi|228785323|gb|EEM33333.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818267|gb|EEM64340.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 452

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMRE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMKELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIIQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|327394796|dbj|BAK12218.1| probable exodeoxyribonuclease VII large subunit XseA [Pantoea
           ananatis AJ13355]
          Length = 457

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/506 (27%), Positives = 228/506 (45%), Gaps = 57/506 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +   ++VS L+  ++ ++E+ +  V +  EIS +    +SGH YF+LKD+ +++   +
Sbjct: 4   PPNANIFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    ++ F P+ G + LV   IT +     YQ+IIES+ P+G G L    E+ K +L 
Sbjct: 63  FRNGNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKARLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF  +HK P+P   K + V+TS TGA + D+L+ +  R P L V+I+P  VQG + P
Sbjct: 123 QEGLFEAEHKKPLPQPAKQVGVVTSATGAALHDVLRVLHRRDPSLPVVIYPTAVQGVDAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+
Sbjct: 183 AAIVRAIELANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  +    
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRVF 296

Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      L  +R +    RL + L   +E  +    R  + +  R+        
Sbjct: 297 SRLDHRLQQQHPQLRLARQQTALFRLQQRLGEAMEQRLRNVTRQQDRLSQRLAQQQPQQR 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +      ++Q +                                         
Sbjct: 357 LYLAQKSLQSWHYRLQQSM----------------------------------------- 375

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                    +             L+  +   TL RG++   D     + + R ++T   +
Sbjct: 376 ------EKLLNRDKNRFGQLAAQLEGVSPLATLARGFSVTTDNAGQVVKKTRQVSTGDLL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + V    P K +  K 
Sbjct: 430 RTRLDDGWVESQVTQLIPEKPKRKKS 455


>gi|229031829|ref|ZP_04187817.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1271]
 gi|228729447|gb|EEL80436.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1271]
          Length = 452

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRD++  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDVITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPAQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRVAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|259907727|ref|YP_002648083.1| exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae Ep1/96]
 gi|224963349|emb|CAX54834.1| Exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae Ep1/96]
 gi|283477581|emb|CAY73497.1| exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae DSM
           12163]
          Length = 456

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/511 (28%), Positives = 232/511 (45%), Gaps = 59/511 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ    +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSQPPGSN--IFTVSRLNSTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ 
Sbjct: 58  VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L+ EGLF   HK P+P   + + VITS +GA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQRLMTEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P  I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP
Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE     +      L + + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAEQVSRNQIERLRQLQSQQQRMEMAMDYYLAQ 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +  T   L   L      L  +R +     L R L+  L+  + R  R    +  R+ + 
Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMILQRRLDDALQQQLRRAARRQEILGQRLNAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  Q + + Q  ++Q ++                                   
Sbjct: 352 RPEIRIERASQQLQQWQYRLQQAMQ----------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                        ++ +           L+  +   TL RG++   + +   I + R L 
Sbjct: 377 ------------QQLGTGKQHFGQLAARLEGVSPLATLARGFSVTSNADGQVIKKTRQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511
               +     DG   + V    P K+   + 
Sbjct: 425 RGDTLKTRLDDGWVESEVTVITPLKKTRGRS 455


>gi|228910016|ref|ZP_04073836.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL
           200]
 gi|228849533|gb|EEM94367.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL
           200]
          Length = 452

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       DI+I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDILIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L ++       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQRSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIIQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|229098652|ref|ZP_04229592.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-29]
 gi|229117677|ref|ZP_04247047.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-3]
 gi|228665769|gb|EEL21241.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-3]
 gi|228684731|gb|EEL38669.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-29]
          Length = 452

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNVIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ +++ +                                        
Sbjct: 354 KIIQTKVAIETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDISLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|262276500|ref|ZP_06054309.1| exodeoxyribonuclease VII large subunit [Grimontia hollisae CIP
           101886]
 gi|262220308|gb|EEY71624.1| exodeoxyribonuclease VII large subunit [Grimontia hollisae CIP
           101886]
          Length = 442

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   Y+VS L+  ++ ++E+ +  V + GEIS      +SGH YF+LKD  +++   ++
Sbjct: 4   TNTNIYTVSRLNAEVRLLLENEMGIVWLVGEISNLTM-ATSGHWYFTLKDRQAQVKCAMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG   ++ F P  G + LV  +++ +     YQII+ES+ P G G L    EK K +L  
Sbjct: 63  KGNNRRVTFRPANGNQVLVRARLSLYEPRGDYQIIVESMQPEGDGLLQQQFEKLKMQLAA 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K P+P  P+ + V+TS TGA + DIL  +  R P L V+I+P +VQG +   
Sbjct: 123 EGLFAASLKKPLPEQPRRVGVVTSSTGAALHDILHVLKRRDPSLPVVIYPTQVQGKDAAI 182

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S+IPI+SA+G
Sbjct: 183 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNEEIVARTIAASTIPIVSAVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+           L     RL +   R +      L 
Sbjct: 237 HEIDVTIADFVADVRAPTPSAAAELVSRDTSVRVQQLSQRTDRLAHAFSRHLSRSQEQLT 296

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L     L +    +     +LD L R L  ++   +    +  +  + +++     + I
Sbjct: 297 RLQHRLALQHPKARIQHQAQQLDELKRRLHQSMRYRLQTDAQRLDRALEKLERYSPANQI 356

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              +  +   +Q +   +++ LR                                     
Sbjct: 357 PGQKALLGYMEQRLIDAMRRQLR------------------------------------- 379

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                         ++++    L + +   TL RGY+  ++     I     L +  +I+
Sbjct: 380 ----------QHQHALALKMETLDAVSPLATLARGYSITRNERGEVIRSVSMLKSGDQII 429

Query: 487 INFFDGQANAIV 498
            +F DG+  + V
Sbjct: 430 SSFGDGEIQSTV 441


>gi|206976322|ref|ZP_03237230.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus H3081.97]
 gi|206745518|gb|EDZ56917.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus H3081.97]
          Length = 452

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGAVIRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAVIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|301055673|ref|YP_003793884.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis CI]
 gi|300377842|gb|ADK06746.1| exodeoxyribonuclease VII large subunit [Bacillus cereus biovar
           anthracis str. CI]
          Length = 452

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISIYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|329297574|ref|ZP_08254910.1| exodeoxyribonuclease VII large subunit [Plautia stali symbiont]
          Length = 455

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/511 (27%), Positives = 236/511 (46%), Gaps = 59/511 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S   + +   ++VS L+  ++ ++E+ +  V +  EIS +    +SGH YF+LKD+ ++
Sbjct: 1   MSLPPTAN--IFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++ +  ++ F P+ G + LV   IT +     YQ+IIES+ P+G G L    E+ 
Sbjct: 58  VRCAMFRNSNRRVSFRPQHGQQVLVRASITLYEPRGDYQLIIESMHPAGEGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L  EGLF  Q K P+P   + +AVITS TGA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KARLAAEGLFDQQFKQPLPEPARQVAVITSATGAALHDVLRVLHRRDPSLPVVIYPTAVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G + P  I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S +P
Sbjct: 178 GVDAPAAIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRLP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELLRRLQSQQQRMEMAMDYYVAQ 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +      L   L      L  +R +    +L R L+  ++  +    R  + ++ R++S 
Sbjct: 292 QQRRFTRLQHRLQQQHPQLRLARQQTTLLQLQRRLQEAVDQRLRLANRQQDRLLQRLQSQ 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I + +Q + +    ++Q                                      
Sbjct: 352 QPQERILRAQQQLQQWHYRLQQG------------------------------------- 374

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                     +  ++             L+  +   TL RG++   D+    + + R L 
Sbjct: 375 ----------MEKQLNHSRQRFGALAAQLEGVSPLATLARGFSVTTDSQGQVVKKTRQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511
           T   +     DG   + V    P K +  K 
Sbjct: 425 TGDLLRTRLDDGWVESQVTALQPQKTRSRKA 455


>gi|228987371|ref|ZP_04147491.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228772343|gb|EEM20789.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 452

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRVAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|229163126|ref|ZP_04291082.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus R309803]
 gi|228620532|gb|EEK77402.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus R309803]
          Length = 452

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N + E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ +++ +                                        
Sbjct: 354 KIMQTKVAIETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  +       +   ++++    
Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYGEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGILDCSVSGIE 444


>gi|212634310|ref|YP_002310835.1| exodeoxyribonuclease VII large subunit [Shewanella piezotolerans
           WP3]
 gi|212555794|gb|ACJ28248.1| Exonuclease VII, large subunit [Shewanella piezotolerans WP3]
          Length = 449

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 221/496 (44%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +  +  Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN S+I   +
Sbjct: 8   TSKNNVYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAM 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL 
Sbjct: 67  FKGRNQAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLA 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
            EG+F+   K P+P   + I V+TSPTGA IRDIL  ++ R   + VII+P  VQG +  
Sbjct: 127 AEGMFATDTKRPLPENIQRIGVVTSPTGAAIRDILHVLARRDSSIEVIIYPTAVQGTDAA 186

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I NAI   N+  E       D++++ RGGGS+EDLW FNDE +   I NS IP++SA+
Sbjct: 187 VSICNAINLANSRAE------VDVLLVTRGGGSLEDLWSFNDEGLAHTIYNSGIPVVSAV 240

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY ADLRAPTP+  AE+     ++    L  + +RL          + N L
Sbjct: 241 GHEVDTTISDYVADLRAPTPSAGAELLSKDADNKAQKLNAVLSRLQQSWQHYQLKQQNRL 300

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +    L   +  + L       D +   L+  L+  +         + NR+ +    H 
Sbjct: 301 QTCEHKLQKQDPQRRLQTYEQTFDEMQLRLQKALQTKLHSLTLKQQQLANRLDNQSPQHR 360

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           ++   Q +    + ++  +                                   +     
Sbjct: 361 LELESQRLSYLAEKLKTSMT--------------------------------DKLAMSEQ 388

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R               V+   + L + +   TL RGY+   +     +    + +    +
Sbjct: 389 R---------------VAHRAQQLDTVSPLATLSRGYSITLNGEGKVVQGADDTSVGDTL 433

Query: 486 LINFFDGQANAIVINK 501
                DG   + VI+ 
Sbjct: 434 TTRLRDGNITSTVIDI 449


>gi|197285406|ref|YP_002151278.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis HI4320]
 gi|227355889|ref|ZP_03840281.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis ATCC
           29906]
 gi|226697596|sp|B4EY61|EX7L_PROMH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194682893|emb|CAR43242.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis HI4320]
 gi|227163877|gb|EEI48779.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis ATCC
           29906]
          Length = 462

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/512 (29%), Positives = 235/512 (45%), Gaps = 57/512 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
            +++  ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD H++I A +
Sbjct: 4   PINNNIFTVSRLNKTVRQLLEMEMGRIWISAEISNFT-QPASGHWYFTLKDTHAQIRAAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G   K+ F P+ G + LV   IT +     YQ+I+ES+ P+G G L    E  K+KL 
Sbjct: 63  FRGQNTKVTFRPQHGQQVLVRATITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLS 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   HK P+P   K I VITS TGA + DIL  +  R P L +II+P  VQG E P
Sbjct: 123 AEGLFDALHKKPLPTPAKQIGVITSSTGAALHDILNILRRRDPSLPIIIYPTAVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I +AI   N  KE       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+
Sbjct: 183 MQIVHAIELANRRKE------CDVLIVGRGGGSLEDLWAFNDERVARAIFASDIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    K  L   L + + RL   +   +  K+  L
Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELISRNKLELLRQLQSQQQRLEMAMDYYLAKKLRAL 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELE--HNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R +      +     + + ++  K      +  R+        
Sbjct: 297 TQLHHRLQQQHPHLRLARQQNVLATTKQRLVTSFQRLLQTKQNQHTQLQKRLNYQEPSPQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ   +   +    + +                                           
Sbjct: 357 IQALLRQQQQLIYRMRE------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +S ++       +I+   L+S +   TL RGY+  +  + + +   + +     +
Sbjct: 374 ----SISQQLARQREQFAISCSRLESVSPLATLSRGYSISEVASGDVLKNTKQVKKGDTL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
                DG   + VIN      +     +  ++
Sbjct: 430 KTRVEDGWITSEVINTQKIPAKRKPAPKSKSS 461


>gi|260771389|ref|ZP_05880314.1| exodeoxyribonuclease VII large subunit [Vibrio furnissii CIP
           102972]
 gi|260613515|gb|EEX38709.1| exodeoxyribonuclease VII large subunit [Vibrio furnissii CIP
           102972]
          Length = 440

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/492 (28%), Positives = 239/492 (48%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 2   TNPNIYTVSRLNAEVRLLLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG+   + F P+ G + LV  +++ +     YQIIIES+ P G G L    ++ K +L  
Sbjct: 61  KGSNRFVRFKPQNGQQVLVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFDQLKMQLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K+P+P  P+ + VITS TGA + DILQ +  R P L +II+P  VQG++   
Sbjct: 121 EGLFAQTLKHPLPEHPRCVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTLVQGEDAAI 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N  +E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+G
Sbjct: 181 QIAQAIGRANAREE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H + +    E +L++ +   +  +   L 
Sbjct: 235 HEIDVTIADFVADVRAPTPSAAAELVSRDNSHKKQAFQGYEHKLSSAMRHYVSEQKGALK 294

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   + +LD L   LE  ++  + +  +H     +R++       +
Sbjct: 295 QLQYRLDKQHPMYRLQRQQQQLDELSMRLERAIQKQLNQTRQHVAKQQHRLQLQSPEKTL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++    +  +++ +                                              
Sbjct: 355 REQHYTLALRERSLI--------------------------------------------- 369

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  ++ S     +     L + +   TL RGY+  Q +    + Q  ++ T  +++
Sbjct: 370 --DAMQRQLVSSRHRFTRLIDKLDTVSPLATLSRGYSITQTSQGEIVRQASDVKTGDQLV 427

Query: 487 INFFDGQANAIV 498
               DG+ ++ V
Sbjct: 428 TRLADGEIHSTV 439


>gi|90021105|ref|YP_526932.1| exodeoxyribonuclease VII large subunit [Saccharophagus degradans
           2-40]
 gi|89950705|gb|ABD80720.1| Exodeoxyribonuclease VII large subunit [Saccharophagus degradans
           2-40]
          Length = 454

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/498 (28%), Positives = 238/498 (47%), Gaps = 55/498 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           N  + K   +   +SV EL+  +K ++E +L  + V GEIS +    +SGH YF+LKD  
Sbjct: 10  NQITAKRGGERKTFSVEELNRRVKDLLEVHLPLIWVEGEISNFSA-PASGHWYFTLKDER 68

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   ++KG   +++F P+ G + L+  +++ + G   +Q+I E +  SG G L    E
Sbjct: 69  AQVRCAMFKGRNQQVKFRPKAGDKVLLRARVSLYEGRGDFQLIAEHMEESGFGLLQQRYE 128

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K +LL EGLF++  K PIP +P  I +ITSPTGA +RD+L  +  RFP + V + P  
Sbjct: 129 ALKAQLLNEGLFNEADKQPIPTLPNHIGIITSPTGAAVRDVLSVLQRRFPSIPVTVIPAP 188

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD+ P ++  AI               D+++L RGGGSIEDLW FN+E + R I    
Sbjct: 189 VQGDDAPAKLIQAIDI------AENSGLFDVLLLCRGGGSIEDLWAFNNEALARRIYECD 242

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPI+SA+GHE D+T+AD+ ADLRAPTP+ AAE+  P K  +   L +   +L   + + +
Sbjct: 243 IPIVSAVGHEVDFTIADFVADLRAPTPSAAAELLCPNKTDIDQLLQHFAKQLKQRLHQRL 302

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 +N L   L +  + L+    +LD+L   L   +++ + +      +   R+   
Sbjct: 303 SQYAQAVNHLRTRLKHPGERLNARAQQLDQLEIRLTRAIQLRLQKDGTTLRNREQRLTQQ 362

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + ++++ + + +  + Q + +                                 +
Sbjct: 363 HPQKLLAQHQKDLAKLRLQLNQAISRL--------------------------------L 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            K   R++  +                +L   +   TLKRGY+     +   I    +  
Sbjct: 391 DKKTDRLQRAV---------------ALLDIASPLATLKRGYSITTKADGTVIRTPADTP 435

Query: 481 TKTRILINFFDGQANAIV 498
               I I   +G+ +A +
Sbjct: 436 KGETIHIKLAEGELSAKI 453


>gi|331673961|ref|ZP_08374724.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA280]
 gi|331069234|gb|EGI40626.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA280]
          Length = 456

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   ++V + A  ++   K
Sbjct: 429 LTTRLNDGVVVSVVSDVAKTRKPRKK 454


>gi|157371832|ref|YP_001479821.1| exodeoxyribonuclease VII large subunit [Serratia proteamaculans
           568]
 gi|166919634|sp|A8GHV3|EX7L_SERP5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157323596|gb|ABV42693.1| exodeoxyribonuclease VII, large subunit [Serratia proteamaculans
           568]
          Length = 458

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/504 (27%), Positives = 227/504 (45%), Gaps = 57/504 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++   +++ T 
Sbjct: 9   IFTVSRLNQTVRQLLEMEMGQIWLSAEISNF-SQPSSGHWYFTLKDDRAQVRCAMFRNTN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    ++ K++L  EGLF
Sbjct: 68  RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQRLSAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             Q K P+P   K + VITS +GA + D+LQ +  R P L +II+P  VQG E P +I  
Sbjct: 128 DQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIIIYPTSVQGAEAPLQIVR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD
Sbjct: 188 AIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRAPTP+ AAE+    +  L   L + + R+   +   +  +      +  
Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRINH 301

Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R +    +L R LE  ++  +    R       R+        I + +
Sbjct: 302 RLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSERAQQRLAQMQPQARIHRYQ 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + +++  ++Q                                                
Sbjct: 362 QRVQQQEYRLQQ-----------------------------------------------A 374

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L  ++ +      +    L++ +   TL RGY+  Q      +   +       +     
Sbjct: 375 LERQLNAWRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTTKQAQVGELLKTRLQ 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQL 514
           DG   + V      K+   K+   
Sbjct: 435 DGWVESEVKTITLAKKPRKKRAAE 458


>gi|226326335|ref|ZP_03801853.1| hypothetical protein PROPEN_00183 [Proteus penneri ATCC 35198]
 gi|225205286|gb|EEG87640.1| hypothetical protein PROPEN_00183 [Proteus penneri ATCC 35198]
          Length = 460

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/507 (29%), Positives = 243/507 (47%), Gaps = 53/507 (10%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
            +++  ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD H++I A +
Sbjct: 4   PINNNIFTVSRLNKTVRQLLEMEMGRIWISAEISNFT-QPSSGHWYFTLKDTHAQIRAAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G   K+ F P+ G + LV   IT +     YQ+I+ES+ P+G G L    E  K+KL 
Sbjct: 63  FRGQNAKVTFRPQHGQQVLVRATITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLS 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   +K P+P   K I VITS TGA + DIL  +  R P L V+I+P  VQG E P
Sbjct: 123 AEGLFDAIYKKPLPSPAKQIGVITSSTGAALHDILNILRRRDPSLPVLIYPTAVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I +AI   N  KE       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+
Sbjct: 183 MQIVHAIELANRRKE------CDVLIVGRGGGSLEDLWAFNDERVARAIFASEIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    K  L   L + + RL   +   +  K+  +
Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELISRNKLELLRQLQSQQQRLEMAMDYYLAKKLRAI 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L   L      L  +R +                                      + 
Sbjct: 297 TQLYHRLQQQHPHLRLARQQN-----------------------------VLASTQQRLV 327

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            + Q +L+ +QH +  +++ L Y                ++  ++I  L    + LI R+
Sbjct: 328 SSFQRLLQAKQHQQTQLQKRLNY----------------QEPSSQIQTLLRQQQLLIYRM 371

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              ++ ++       +I+   L+S +   TL RGY+  +  +   +   + +     +  
Sbjct: 372 RESIAQQLSRQREQFAISCSRLESVSPLATLSRGYSISETMSGEVLKNTKQVKVGDPLKT 431

Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQL 514
              DG   + V+     + +     + 
Sbjct: 432 RVEDGWITSEVVKTQKIRAKRKTTAKN 458


>gi|296114490|ref|ZP_06833143.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978846|gb|EFG85571.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 486

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 160/496 (32%), Positives = 263/496 (53%), Gaps = 29/496 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     + +  EYSVSE+S  ++  +E     + VRGEI+ ++  +SSGH YFSLKD   
Sbjct: 7   PSGAPGATNIAEYSVSEISGAIRSTLEGTFGRIRVRGEITEFK-RYSSGHLYFSLKDEKG 65

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++ +++W+G+++++   PE G+E +  GKI+++   S YQ++I+ L  +G G LL  +EK
Sbjct: 66  KLSSVVWRGSVSRLGLKPENGVEVIATGKISSYGERSSYQMVIDRLEYAGEGALLARIEK 125

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
            + +L +EG+F  + K  IPF+P++I V+TS  GAV+ DI   ++ RFP  ++++PV VQ
Sbjct: 126 LRLRLAQEGVFDAERKQRIPFLPRVIGVVTSAQGAVLHDIRTTVARRFPRDLLVWPVPVQ 185

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+   + IA A+   + +       RPD++I+ARGGGS+EDL  FNDE ++RA+A  +IP
Sbjct: 186 GEGAAERIAEAVAGFDRIDGRTGIARPDVLIVARGGGSLEDLMAFNDESVLRAVAACTIP 245

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHETD TL D+ +D RAPTPT AAEMAVPV+  L++ L +  ARL+N + R+++ 
Sbjct: 246 VISAVGHETDTTLIDFVSDRRAPTPTAAAEMAVPVRTELEADLAHRMARLSNGLGRVLQL 305

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
               L      LP+    L  +R RLD     L+  L  ++ R+        +R+     
Sbjct: 306 GRARLGRAAAGLPDLPSLLETARIRLDDRGYRLDMALPALLERRRARLQAACDRLP--TP 363

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              I   R  +      + +             +++   +  LR                
Sbjct: 364 GTIIALKRSGLTLASAALARGGP-------QYLRDRRGRVTALRPSAP------------ 404

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   L   ++     V      L+S + +  L+RGY  +QD   + +T    +   
Sbjct: 405 -------ALLALLRERRARVQGEGGRLESLSPRAVLERGYVLVQDRAGHPLTLAAEVKAG 457

Query: 483 TRILINFFDGQANAIV 498
            ++++ F DG   A V
Sbjct: 458 AQVIMTFADGDVAARV 473


>gi|145298846|ref|YP_001141687.1| exodeoxyribonuclease VII, large subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142851618|gb|ABO89939.1| exodeoxyribonuclease VII, large subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 456

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/504 (28%), Positives = 238/504 (47%), Gaps = 57/504 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P S  N  +   ++V+ L+  ++ I+E +L  V + GE+S    + SSGH YFSLKD  
Sbjct: 5   TPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDLG 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   ++KG   ++ F P++G++ LV  +++ +     YQ+IIES+ P+G G L    E
Sbjct: 64  AQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K++L  EGLF +  K P+P  P+ + ++TS TGA + D+L  +  R P L V I+P +
Sbjct: 124 ELKRRLGAEGLFDEGRKRPLPREPRAVGLVTSATGAALHDMLTVLKRRAPDLPVFIYPTQ 183

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  AI   N   E       D++I+ RGGGS+EDLW FN+E++ RAIANS+
Sbjct: 184 VQGSAAIGQIVAAIALANRRAE------VDVLIVGRGGGSLEDLWCFNEEVVARAIANSA 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHE D T++D+AADLRAPTP+ AAE+  P +      L +L  RL   + R  
Sbjct: 238 IPVISAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLWQRLVQAMNRHQ 297

Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               +    L K L +    + L     RLD L   L+  L   + +  R   ++  R++
Sbjct: 298 TAARHGFVLLQKRLDHQDPKRRLEQQSQRLDELSARLQQLLNQRLHQGERRLANLELRLQ 357

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +      +   R+     Q+ +  ++ +                                
Sbjct: 358 AKSPERLLAIGRRRHQLAQERLYALITKRQDQASH------------------------- 392

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                  +++ T  L   +   TL RGY+  +  + + I +   
Sbjct: 393 ----------------------RLAMLTARLDGVSPLATLGRGYSITRTQSGDVINRAAQ 430

Query: 479 LATKTRILINFFDGQANAIVINKA 502
           +     ++    +G     V    
Sbjct: 431 VNAGQTLVTTLAEGHLQVRVEEVH 454


>gi|292493718|ref|YP_003529157.1| exodeoxyribonuclease VII large subunit [Nitrosococcus halophilus
           Nc4]
 gi|291582313|gb|ADE16770.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus halophilus
           Nc4]
          Length = 452

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 55/502 (10%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   S         Y++S L    ++++E N   + V GEIS      SSGH YF+LKD 
Sbjct: 1   MANVSSNPKSAQDIYTISRLVREARYVLERNFPLLWVAGEISNL-SQPSSGHIYFTLKDK 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++     + F  E+G++ L   ++  +    ++Q+I+E L  +G G L  A 
Sbjct: 60  TAQVRCAMFRNRNRLLGFSLEDGMQVLARAQVGLYETRGEFQLIVEYLEEAGDGALRRAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K+KL  EGLF+ +HK P+P +P+ + VITSP+GA I+DIL  +  RFP + V+I+P 
Sbjct: 120 EELKQKLSAEGLFAPEHKRPLPTLPRQVGVITSPSGAAIQDILSVLKRRFPAIPVLIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+   ++IA AI +     +       D++ILARGGGS+EDLW FN+E + R I N 
Sbjct: 180 PVQGEGASQKIAAAIAKAEQRCD------CDLLILARGGGSLEDLWAFNNETLARTIYNC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           ++PII  +GHE D+T+AD+AAD RAPTP+ AAE+AVP         +NLE RL  +  + 
Sbjct: 234 TLPIICGVGHEIDFTIADFAADQRAPTPSAAAEIAVPDSREWCQHFLNLEQRLGFLFQQR 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +++  ++L  L + L +    L     R+D L + L      +   ++     ++  ++ 
Sbjct: 294 LQHLRHSLEGLTQRLRHPHTRLQEWAQRVDELEQRLHRAYTTLERERFHRLERLLTHLQR 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++     +++  + ++   +QH                                
Sbjct: 354 LSPAQRLEVYHSRLVDLDRRLQASQQQH-------------------------------- 381

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++       +  R LQ+ + + TL+RGY  +       + +   +
Sbjct: 382 ---------------LEQQRMRFEMAQRALQAVSPQATLERGYAIVTGPQGVVLRKASQV 426

Query: 480 ATKTRILINFFDGQANAIVINK 501
               RI      G+    +   
Sbjct: 427 EPGARIEARLARGRIRGEITEI 448


>gi|307132052|ref|YP_003884068.1| exonuclease VII, large subunit [Dickeya dadantii 3937]
 gi|306529581|gb|ADM99511.1| exonuclease VII, large subunit [Dickeya dadantii 3937]
          Length = 467

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/514 (26%), Positives = 231/514 (44%), Gaps = 57/514 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             +      ++VS L+  +K ++E  +  V + GEIS +    SSGH YF+LKD  +++ 
Sbjct: 7   SSSLPSSAIFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDERAQVR 65

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++    ++ F P+ G + L+   IT +     YQ++ ES+ P+G G L    E+ K+
Sbjct: 66  CAMFRTGNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQFEQLKQ 125

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF  Q+K  +P   + + VITS +GA + DIL  +  R P L V+I+P  VQG 
Sbjct: 126 RLSAEGLFDQQYKQLLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPTAVQGV 185

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           + P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+
Sbjct: 186 DAPAQIVRAIELANLRQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIV 239

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + +   RL   +   +  + 
Sbjct: 240 SAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRQ 299

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                L   L      L  +R +    RL + L+  +++ + ++ R    ++ R++    
Sbjct: 300 QQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDEAIQLQLRQQTRRQERVVQRLRQHQP 359

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              + + +Q + + +  ++                                         
Sbjct: 360 QPRLHRAQQQVQQLRYRMQ----------------------------------------- 378

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   L  ++             L++ +   TL RGY+     +   + +    A  
Sbjct: 379 ------SALEKQLNQHKQRFGEACSHLEAVSPLATLARGYSVTTAPDGKVMKRTAQAAKG 432

Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
             +     DG   + +        +P  K Q  N
Sbjct: 433 DILKTRLQDGWVESQITEIQKESTKPRTKRQTKN 466


>gi|253689374|ref|YP_003018564.1| exodeoxyribonuclease VII, large subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259646296|sp|C6DBG5|EX7L_PECCP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|251755952|gb|ACT14028.1| exodeoxyribonuclease VII, large subunit [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 462

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/519 (26%), Positives = 229/519 (44%), Gaps = 58/519 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+ F          ++VS L+  ++ ++E  +  + + GEIS      SSGH YF+LKD 
Sbjct: 1   MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  ++ F P+ G + L+   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMQPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K+KL  EGLF  Q K  +P   K + VITS +GA + DILQ +  R P L VI++P 
Sbjct: 115 EQLKQKLAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG + P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 SVQGADAPLQIVRAIELANQREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+  DLRAPTP+ AAE+    +  L   + +   RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +      L   L      L  +R                                  
Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQ--------------------------------- 315

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 + K RQ + +  Q   Q+ +   R   L+++           + + R       
Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTLRRSERLQQRLMQQQPQTRIHRAQQR------- 363

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +++L  +++  +  ++      + I    L+  +   TL RGY      +   +     +
Sbjct: 364 LQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNVTQI 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
                +     DG   + V    P      K+ +  +  
Sbjct: 424 TPGETLKTRLQDGWVESQVTTLVPNPSSVKKRRKPSSQS 462


>gi|119476444|ref|ZP_01616795.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2143]
 gi|119450308|gb|EAW31543.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2143]
          Length = 469

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/503 (27%), Positives = 234/503 (46%), Gaps = 50/503 (9%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   +   +      ++S+L+   K ++E N   V + GEIS      SSGH YFSLKD+
Sbjct: 12  MQTNTDIQTPKRDTLTISQLNRQAKRLLEGNFPSVWIVGEISNL-SRPSSGHWYFSLKDS 70

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           ++++   +++ +  ++ F  + G + +   K++ +     YQ+I+E +  +G G L    
Sbjct: 71  NAQVRCAMFRTSNARLRFQADSGQQVMARAKLSLYEARGDYQLIVEHMELAGDGLLARQF 130

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++ K +L +EGLF  QHK  +P +P+ IA++TSPTGA I DIL  +  RFP + V IFP 
Sbjct: 131 DELKHRLFQEGLFDQQHKQILPTLPRHIAIVTSPTGAAIHDILTVLGRRFPSIPVTIFPT 190

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG      IA AI  +N L    + P  D+I+++RGGGS+EDLW FN+E++ RAI+ S
Sbjct: 191 PVQGQAAAAGIAKAISLVNQLAASGSLP-VDVILVSRGGGSLEDLWAFNEEVVARAISQS 249

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P++SA+GHE D T+AD+ AD RAPTP+  AE+  P ++ + ++    E  L   +++ 
Sbjct: 250 DLPVVSAVGHEVDVTIADFVADHRAPTPSAGAELLSPDRQEILANFTGYEQALIRRMLQQ 309

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     L+     L +    L     RLD L   L+++      ++    + I +R++ 
Sbjct: 310 LESSRQRLHWQQTRLRHPGSRLQEHSQRLDELELRLKNSWRNRCQQQKLGIDLIQSRLQQ 369

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
               H  ++         + +EQ V + + +                             
Sbjct: 370 QTPAHLTRQLTVRYQNLYRRLEQQVAKQMTHR---------------------------- 401

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                 +  T  +L + +   TL RGY  + D     IT     
Sbjct: 402 -------------------RQKLDNTMHLLDAVSPLATLDRGYAIVADAKGQVITNAATA 442

Query: 480 ATKTRILINFFDGQANAIVINKA 502
                I      G   + V++  
Sbjct: 443 TVGQSIHTKLAKGAIKSTVVSIE 465


>gi|238753869|ref|ZP_04615229.1| Exodeoxyribonuclease 7 large subunit [Yersinia ruckeri ATCC 29473]
 gi|238707857|gb|EEQ00215.1| Exodeoxyribonuclease 7 large subunit [Yersinia ruckeri ATCC 29473]
          Length = 459

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 141/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++   +
Sbjct: 4   TSATSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ +  +  F P+ G   LV   IT +     YQ+I ES+ P+G G L    E+ K +L 
Sbjct: 63  FRNSNRRTTFKPQNGQMVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKARLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   HK P+P   K + VITS +GA + D+LQ +  R P L V+I+P  VQG E P
Sbjct: 123 AEGLFDALHKQPLPAPAKRVGVITSASGAALHDVLQVLQRRDPSLPVVIYPTSVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+
Sbjct: 183 MQIVRAIEMANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAEM    +  L   +   + R+   +   +  +    
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEMISRNQVELVRQIQAQQQRMEMAMDYYLAQRHQQF 296

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R +    +L R LE   +  I    R    +  R+ +   +  
Sbjct: 297 TRLHHRLQQQHPHLRLARQQTLLLKLQRRLEDAAQNQIRLLARRGERLQQRLNNRQPLGK 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I    Q + +++  ++Q                                           
Sbjct: 357 IHHYHQRVQQQEYRLKQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L  ++        I    L++ +   TL RGY+  Q  + + +   + +     +
Sbjct: 374 ----ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPSGSLLKTTQQVHIGDTL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515
                DG   + +    P K+    + +  
Sbjct: 430 KTRLQDGWVESEITRLTPVKKTLKPRSRAK 459


>gi|293410920|ref|ZP_06654496.1| exodeoxyribonuclease VII [Escherichia coli B354]
 gi|291471388|gb|EFF13872.1| exodeoxyribonuclease VII [Escherichia coli B354]
          Length = 456

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+     +   + Q + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   ++V + A  ++   K
Sbjct: 429 LTTRLNDGVVVSVVSDVAKTRKPRKK 454


>gi|188533180|ref|YP_001906977.1| exodeoxyribonuclease VII large subunit [Erwinia tasmaniensis
           Et1/99]
 gi|226695873|sp|B2VE96|EX7L_ERWT9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|188028222|emb|CAO96080.1| Exodeoxyribonuclease VII large subunit [Erwinia tasmaniensis
           Et1/99]
          Length = 456

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 142/511 (27%), Positives = 231/511 (45%), Gaps = 59/511 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ    +   ++VS L+  ++ ++E  +  V +  EIS +    SSGH YF+LKD+ ++
Sbjct: 1   MSQPPGTN--IFTVSRLNSTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    ++ 
Sbjct: 58  VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFDQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L+ EGLF   HK P+P   + + VITS +GA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KQRLMAEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P  I  AI   N  KE       D++I+ RGGGS+EDLW FNDE + RAI  S IP
Sbjct: 178 GAEAPTGIVRAIELANARKE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +      L   + R+   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRDQIERLRQLQQQQQRMEMAMDYYLAR 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +T   L   L      L  +R +    ++ R L+  L+  + +  R    +  R+ + 
Sbjct: 292 QQSTFTRLQHRLQQQHPQLRLARQQTALMKVQRRLDDALQQHLRQATRRQEQLGQRLNAF 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  Q + + Q  + Q +                         + R+     H 
Sbjct: 352 RPEMRIERASQQLQQWQYRLRQAM-------------------------QQRLGTGKQH- 385

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                       L+  +   TL RG++         + +   L 
Sbjct: 386 ---------------------FGQLAARLEGVSPLATLARGFSVTSTAEGQVVKKTGQLH 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511
               +     DG   + V    P K+   + 
Sbjct: 425 QGDTLKTRLDDGWIESEVTAITPLKKTRRRS 455


>gi|319405222|emb|CBI78827.1| exodeoxyribonuclease VII large subunit [Bartonella sp. AR 15-3]
          Length = 475

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 210/530 (39%), Positives = 305/530 (57%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F +K+ + +  E+SVSE++  L+ IVE    +V VRGEISGYRG+H+SGHAYF+LKD
Sbjct: 1   MDLFLEKSVATNVAEFSVSEIAGALRRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII++L P+G G L+T 
Sbjct: 61  DKARLEAVIWRGVIEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDTLEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKK  +EGLF D  K  +P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKFADEGLFDDAKKKKLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   N L  G    +PD+II+ARGGGS+EDLW FNDE +VRA++ S
Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLGNVLSKPDLIIVARGGGSLEDLWGFNDEAVVRAVSAS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L++ L +L  R      R 
Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKLDLETQLASLNLRFFVGSARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L+++++ LP  DQ  +  R   D +   L+  L +   +K   F  ++ R+  
Sbjct: 301 FSFYKQKLSAVVRGLPTVDQLFALPRRNFDEISSRLQRALCVNYDKKRFCFYTLVIRLSP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  N +K +Q+  E    +                                       
Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFL---------------------------------- 384

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + +  R+L+S +Y++ L+RG+       NN I +    
Sbjct: 385 -------------RNVEKQRVQIEMAFRLLKSTSYQSILERGFVLALGQENNPIKRLVQF 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG+ N    N        +K+ +   +       QG LF
Sbjct: 432 PRTGQISLRFFDGEVNVSTCNSVSKNSPNSKQLKRQKD------DQGTLF 475


>gi|119713108|gb|ABL97177.1| exodeoxyribonuclease VII large subunit [uncultured marine bacterium
           EB0_49D07]
          Length = 461

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 137/495 (27%), Positives = 221/495 (44%), Gaps = 49/495 (9%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           + +    SV +L+   K ++E+    + V GEIS      SSGH YF+LKD    I   +
Sbjct: 15  NHEEQVISVGQLNQQAKRLLENQFRGIAVLGEISNL-ARPSSGHIYFTLKDEDGAIRCAM 73

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++   +++ F P+ G + ++ G+++ +     YQ+I+ S+ P+GSG L+   ++ KKKL 
Sbjct: 74  FRNQNSRLNFEPQNGDQCILKGQVSLYAPRGDYQLIVSSMQPAGSGNLMQQFDELKKKLD 133

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLFS   K  +P  P+ I VITS + A  +DIL  I  R P+ +V + P  VQGD  P
Sbjct: 134 AEGLFSQDIKQNLPTQPRHIGVITSESTAAFQDILTTIQRRAPISQVTLIPATVQGDTAP 193

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + + NA+               D+I++ RGGGSIEDLW FN+E + R I +  IPIIS +
Sbjct: 194 RTLINALQNALDFNNVNPENSFDVILMCRGGGSIEDLWAFNNESLAREIFDYPIPIISGV 253

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D+T+AD+ ADLRAPTPT AAE+       L+ ++ + +  L +    L+K K   +
Sbjct: 254 GHEIDFTIADFVADLRAPTPTAAAELVTEYYFQLEDAIEDAKDALMHSFKNLVKEKYQRI 313

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             + ++L +    L      LD L   L   ++  +    +      N +     +  I+
Sbjct: 314 LLISQSLKSPIILLKEQSQSLDNLEIRLSQIIQNSLNSTKQDLKIASNLLYQSNAMRVIE 373

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           K +  I  K Q I+                                              
Sbjct: 374 KYQGMISSKMQSIQ---------------------------------------------- 387

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +   +     ++      L + +    L RGY  + D++   +T   N+     I  
Sbjct: 388 -HQIKSAMIKKGYALKNLETNLVAVSPLAVLDRGYAIVMDSSGKALTSSANIKVGDTIQT 446

Query: 488 NFFDGQANAIVINKA 502
               G   + V  K 
Sbjct: 447 RLATGNLTSDVTKKK 461


>gi|163941938|ref|YP_001646822.1| exodeoxyribonuclease VII large subunit [Bacillus weihenstephanensis
           KBAB4]
 gi|229013398|ref|ZP_04170535.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides DSM 2048]
 gi|229061870|ref|ZP_04199200.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH603]
 gi|229135002|ref|ZP_04263808.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST196]
 gi|229168924|ref|ZP_04296641.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH621]
 gi|226694638|sp|A9VGD4|EX7L_BACWK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|163864135|gb|ABY45194.1| exodeoxyribonuclease VII, large subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228614516|gb|EEK71624.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH621]
 gi|228648504|gb|EEL04533.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST196]
 gi|228717431|gb|EEL69099.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH603]
 gi|228747810|gb|EEL97676.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides DSM 2048]
          Length = 452

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 157/498 (31%), Positives = 238/498 (47%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N           D++I+ RGGGSIE+LW FN+E++ R I  S IPIISA
Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVAREIFTSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    LQ  ++    RL   +   +  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNTIELQEKVLQRTLRLQRAMRERVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ +++ +                                        
Sbjct: 354 KIIQTKTAIETLQKQLQREM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++         + L+  +    + RGY  + D     +   ++++    
Sbjct: 374 -------QTLLQTKEFVFVRAAQKLEVLSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V +  
Sbjct: 427 VSVQLQDGILDCSVSSIE 444


>gi|158521676|ref|YP_001529546.1| exodeoxyribonuclease VII, large subunit [Desulfococcus oleovorans
           Hxd3]
 gi|158510502|gb|ABW67469.1| exodeoxyribonuclease VII, large subunit [Desulfococcus oleovorans
           Hxd3]
          Length = 448

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 146/499 (29%), Positives = 245/499 (49%), Gaps = 58/499 (11%)

Query: 6   QKNSLDHPE---YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
            +     PE   Y+VS L+  +K ++E     + V GEIS ++    SGH YF+LKD+ +
Sbjct: 2   AQTHTSLPESGIYTVSRLTGEIKVLLEKQFPIIWVEGEISNFK-RPGSGHFYFTLKDSTA 60

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++ A+++      ++F+PE+G++   +G+I+ +     YQ+I E ++P G G L+ A E+
Sbjct: 61  QVQAVMFVNQNRGLKFMPEDGMKITGLGRISVYAPRGNYQVIFEHIMPQGMGELVAAFEQ 120

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            KKKL +EGLF    K P+PF+P  + +I+SPTGAV+ D++  ++ RFP + + I P  V
Sbjct: 121 LKKKLADEGLFDPGRKKPVPFLPAKVCLISSPTGAVVHDMIHVMTRRFPGIEIEILPASV 180

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD+   EIA A+   N   +       D++++ARGGGS+EDL+ FN E + RA+A S+I
Sbjct: 181 QGDKAAVEIAAALALANRRADA------DVLVVARGGGSLEDLFAFNTETVARAVAASAI 234

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SA+GHETD+T+ D+ ADLRAPTP+ AAE+ VPVK+ L +   NL  R+      +I+
Sbjct: 235 PVVSAVGHETDFTICDFVADLRAPTPSAAAELIVPVKKELLAHCRNLRVRMVKGFDNIIR 294

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
           ++   L  + K L +  + L  +  RLD L   L   L+  I ++         ++ S  
Sbjct: 295 HRRRALRDMAKRLIDPRRALGDALLRLDELAMRLVRALDREIAKRAERLAWQQKQLFSRM 354

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                 +         + +   ++                                    
Sbjct: 355 PERLTTEGLALTDRLVERLSSAMQ------------------------------------ 378

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLA 480
                     +  ++     V   T+ L + + +  L+RGY+  Q  ++   I +     
Sbjct: 379 ----------TTYLRENRHRVDGLTQRLFALSPRAVLERGYSITQKVSDGQVIKKTGQAD 428

Query: 481 TKTRILINFFDGQANAIVI 499
               + I   DG     V 
Sbjct: 429 PGDALTIIVSDGSVRCTVD 447


>gi|152998145|ref|YP_001342980.1| exodeoxyribonuclease VII large subunit [Marinomonas sp. MWYL1]
 gi|150839069|gb|ABR73045.1| exodeoxyribonuclease VII, large subunit [Marinomonas sp. MWYL1]
          Length = 446

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 142/500 (28%), Positives = 241/500 (48%), Gaps = 57/500 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F+   S +   ++VS+L+  ++ ++E++L  + V GEIS      SSGH YFSLKD+
Sbjct: 1   MKKFTTSVSQET-AFTVSQLNRQIQQLLEASLPWILVEGEISNL-AKPSSGHWYFSLKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I   ++KG    + F P++G    +  ++T +      Q+ +E +  +G G L  A 
Sbjct: 59  KAQIRCAMFKGKNAAVRFKPKDGDMVRLRARVTFYGPRGDCQLSVEGMESAGEGALQQAF 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K  L  EGLF+ +HK P+P  P+ +A+ITSP GA +RD++     RFPL  + I P 
Sbjct: 119 ERLKNTLQAEGLFAPEHKKPLPTKPERVAIITSPIGAAVRDMVIAFRRRFPLTELTILPS 178

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +  K I   + +             D IIL RGGGS+EDLW FNDE + RAI  +
Sbjct: 179 LVQGQDAAKNILRQLQR------ADGSGHFDAIILGRGGGSLEDLWSFNDETLARAIFAA 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SA+GHETD+T+AD+ AD+RA TPT AAE+  P + HL   +   E +L   + R+
Sbjct: 233 QTPIVSAVGHETDFTIADFVADVRAATPTAAAELLSPDRNHLVRQIEQQEKQLARRMSRI 292

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     L+ ++K + +  + +   + +LD+L R L+ +++  +  +     ++ +R++ 
Sbjct: 293 LEQSQQQLDFMIKRIRHPKERIEQQQIQLDQLKRRLQQSMQRKVIEQQTQTANLAHRLER 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           +     I ++RQ +      + +                                     
Sbjct: 353 NSPSRRIDQDRQKLKNMDARLAR------------------------------------- 375

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                      LS+ + +  T+ +     L   +  NTL RGY      +   I   +++
Sbjct: 376 ----------ALSNTLTNKQTTFARIIDKLNLVSPLNTLARGYAIA-SKDEQVIRSVKDV 424

Query: 480 ATKTRILINFFDGQANAIVI 499
                I +   DG  +  V 
Sbjct: 425 KAGDSISVRVQDGVLSCDVT 444


>gi|295706549|ref|YP_003599624.1| exodeoxyribonuclease VII large subunit [Bacillus megaterium DSM
           319]
 gi|294804208|gb|ADF41274.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium DSM
           319]
          Length = 446

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 146/492 (29%), Positives = 231/492 (46%), Gaps = 58/492 (11%)

Query: 15  YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ ++K    V+ ++  V ++GEIS ++  HS GH YF+LKD ++RI A+++ G 
Sbjct: 7   LTVTALTRYIKRKFDVDPHMQDVWIKGEISNFK-RHSRGHMYFTLKDQNARIAAVMFAGH 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ F PEEG+  L+  +I+ +  S  YQ+ ++ + P G G L  A E+ KKKL +EGL
Sbjct: 66  NRQLNFQPEEGMNVLIRAEISVYEPSGNYQMYVKEMQPDGVGNLYLAYEQLKKKLEKEGL 125

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192
           F    K  +P  P  I VITSPTGA +RDI+  +  R+   +I+ P  VQG      I  
Sbjct: 126 FDPARKRKLPKYPTTIGVITSPTGAAVRDIITTLKRRYNANIIVMPALVQGVNAAPSIIK 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI + N  KE       D++I+ RGGGSIE+LW FN+E + RAI  S+IP+ISA+GHETD
Sbjct: 186 AIEEANRRKEA------DVLIVGRGGGSIEELWAFNEESVARAIFTSTIPVISAVGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    +   L     RL   +  +++     L    K
Sbjct: 240 FTIADFVADLRAPTPTGAAELAVPHISEITERLTQRNIRLLRSMKEMLQSSSRRLERSQK 299

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       + +     +LD+L           I  K  ++  +   +  +   H + K  
Sbjct: 300 SYAFRYPQKLVEQKEQQLDQLMERFYREGRRYIEHKRTNYEQLTAALLRNHPEHQLTKAA 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   +                                               L   +   
Sbjct: 360 ERQQQ-----------------------------------------------LTKMLTKE 372

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +K      +  T  L + +   T++RGY+ + D     I   + ++    + +   
Sbjct: 373 MQQLLKQKQLLFATATSKLHTLSPLKTMERGYSLVYDKEKELIKSTKQVSKGDVVNVRLT 432

Query: 491 DGQANAIVINKA 502
           DGQ    V    
Sbjct: 433 DGQLQCEVSKIE 444


>gi|117919683|ref|YP_868875.1| exodeoxyribonuclease VII large subunit [Shewanella sp. ANA-3]
 gi|158512316|sp|A0KUK0|EX7L_SHESA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|117612015|gb|ABK47469.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. ANA-3]
          Length = 448

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 144/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ I+E  L  V + GEIS +    SSGH Y +LKD++S+I   ++KG
Sbjct: 6   NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL  +G
Sbjct: 65  RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K  +P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+     I
Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADMNI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     ++    L  + +RL          +   L+ L
Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQEKRLSLL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      +TL     R D +   LE  L   +    R    + NR++     H +  
Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEQQSPKHKLAL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +      ++                                               
Sbjct: 359 ETNRLSYLATRLQ----------------------------------------------- 371

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +   +      ++     L++ +   TL RGY+   D NN  I     L+   +I   
Sbjct: 372 DAMQDTLNQSEQRITYAAHQLETVSPLATLSRGYSITTDANNQVIDNAAQLSVGDKINTR 431

Query: 489 FFDGQANAIVINKAPPK 505
              GQ  + V       
Sbjct: 432 LRHGQVQSTVTQITDES 448


>gi|330991091|ref|ZP_08315045.1| Exodeoxyribonuclease 7 large subunit [Gluconacetobacter sp. SXCC-1]
 gi|329761912|gb|EGG78402.1| Exodeoxyribonuclease 7 large subunit [Gluconacetobacter sp. SXCC-1]
          Length = 486

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 160/493 (32%), Positives = 268/493 (54%), Gaps = 29/493 (5%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           + PE+SV+E+S  ++  +E     + VRGEI+ ++    SGH YFSLKD   ++ +++W+
Sbjct: 15  NTPEFSVAEISGAIRRTLEGTFGRIRVRGEITEFKRYP-SGHLYFSLKDEGGKLSSVVWR 73

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           GT++++   PE G+E +  GKI+ +   S YQ++I+ L  +G G LL  +E+ +  L EE
Sbjct: 74  GTVSRLGLKPENGVEVIATGKISAYGERSSYQMVIDRLEYAGEGALLARIERLRLSLAEE 133

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF    K P+PF+P++I V+TS  GAV+ DI   I+ RFP RV+++PV VQGD   + I
Sbjct: 134 GLFDSARKRPLPFLPRVIGVVTSAQGAVLHDIRTTIARRFPHRVLVWPVPVQGDGAAERI 193

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI   + ++     PRPD++I+ARGGGS+EDL  FNDE ++RA+A   IP+ISA+GHE
Sbjct: 194 AQAIAGFDRIEGSPALPRPDVLIVARGGGSLEDLMAFNDEGVLRAVAACRIPVISAVGHE 253

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D+ +D RAPTPT AAEMAVPV+  L+++L   +ARL   + R ++     L+  
Sbjct: 254 TDTTLVDFVSDCRAPTPTAAAEMAVPVRAELEAALAQRDARLRGGLGRCLQLARARLDRA 313

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              LP+    +  +R RLD L   L+  L   +        +  +R+ +  ++       
Sbjct: 314 AAGLPDLPGVVENARRRLDDLGYRLDLALPARVHAMRGRLQNASDRLPAPHML------- 366

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             +  ++  + ++     + +    + + AIL  LR      +                 
Sbjct: 367 --LALRRADLARVGTASQQAMGALLRRREAILAGLRVPPAVLVS---------------- 408

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++++  + ++ T   L + + +  L+RGY  + D+    +           +++ F 
Sbjct: 409 ---QLRASTSRLAGTGGRLDALSPRAVLERGYVLVTDSAGRPLAHAAQARGAPEVVMTFA 465

Query: 491 DGQANAIVINKAP 503
           DG+  A  + +A 
Sbjct: 466 DGKVAARPLGEAS 478


>gi|330829941|ref|YP_004392893.1| exodeoxyribonuclease 7 large subunit [Aeromonas veronii B565]
 gi|328805077|gb|AEB50276.1| Exodeoxyribonuclease 7 large subunit [Aeromonas veronii B565]
          Length = 459

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 141/509 (27%), Positives = 241/509 (47%), Gaps = 57/509 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P S  N  +   ++V+ L+  ++ I+E +L  V + GE+S    + SSGH YFSLKD  
Sbjct: 5   TPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDMS 63

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   ++KG   ++ F P++G++ LV  +++ +     YQ+IIES+ P+G G L    E
Sbjct: 64  AQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K++L  EGLF +  K P+P  P+ + ++TS TGA + D+L  +  R P L V I+P +
Sbjct: 124 ELKRRLGAEGLFDESRKRPLPREPRAVGLVTSSTGAALHDMLTVLKRRAPDLPVFIYPTQ 183

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  AI + N   E       D++I+ RGGGS+EDLW FN+E + RAIA+S+
Sbjct: 184 VQGSAAISQIVAAIAKANQRAE------VDVLIVGRGGGSLEDLWCFNEEAVARAIAHSA 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP++SA+GHE D T++D+AADLRAPTP+ AAE+  P +      L++L+ RL   + R  
Sbjct: 238 IPVVSAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLVHLKQRLLQAMSRQQ 297

Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               +    L K L +    + L     RLD L   L+  L   +               
Sbjct: 298 TAARHDFILLQKRLDHQDPKRRLEQQSQRLDELSSRLQQLLRQRLH-------------- 343

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                           + ++ +  +                  L +  +  +  +     
Sbjct: 344 ----------------QGERRLTNL-----------------ELRLQGKSPERLLAAGKR 370

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
             +    R+  +++ +       +++ T  L   +   TL RGY+  +      I++   
Sbjct: 371 RHQLAEERLHALIAKRQDLASHRLAMLTARLDGVSPLATLGRGYSITRTARGEVISRADQ 430

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQ 507
           + +  +++     G     V        Q
Sbjct: 431 VNSGDQLVTTLAQGSLQVRVEEVIKDSAQ 459


>gi|290475587|ref|YP_003468475.1| exonuclease VII, large subunit [Xenorhabdus bovienii SS-2004]
 gi|289174908|emb|CBJ81709.1| exonuclease VII, large subunit [Xenorhabdus bovienii SS-2004]
          Length = 455

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 146/504 (28%), Positives = 234/504 (46%), Gaps = 57/504 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +   +SVS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD  ++I A +
Sbjct: 4   PTNTGIFSVSRLNQTVRQLLELEMGRIWLSAEISNF-SQPSSGHWYFTLKDERAQIRAAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ +  +  F P+ G + LV  +IT +     YQ+I+ES+ P+G G L    E  K+KL 
Sbjct: 63  FRSSNLRATFRPQNGQQVLVRAQITLYEPRGDYQLIVESIQPAGDGLLQQQFEILKQKLT 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   HK P+P   K + VITS +GA + DIL  +  R P L +II+P  VQG E P
Sbjct: 123 SEGLFDSIHKKPLPSPAKRLGVITSASGAALHDILHILKRRDPSLPIIIYPTAVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SAI
Sbjct: 183 LQIIRAIELANDRQE------CDVLIVGRGGGSLEDLWCFNDEQVARAIFQSRIPIVSAI 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + +L+ RL   +      K+   
Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELVSRNQIELLRQVQSLQQRLEMAMDYFFAQKLRIF 296

Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N+L   L      L  +R +     L ++L  +L   + + +     +  R+        
Sbjct: 297 NTLQHQLQQQRPDLRLARQQNKLVELRQKLVDSLLRCLKQHFLSHEKLNLRLLQTNPEQQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I+   Q I +    ++Q                                           
Sbjct: 357 IRHYSQQIQQYDFRLKQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +  ++       +++   L + +   TL+RGY+  +  +   + + + +     +
Sbjct: 374 ----AIERQLGHYREKFAVSCSQLNAVSPLATLQRGYSISETADGTLLKETKQVKVGDTL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPT 509
                DG   + VI    P ++  
Sbjct: 430 NTRLQDGWVKSQVIQVKRPTKREK 453


>gi|304398576|ref|ZP_07380448.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. aB]
 gi|304353787|gb|EFM18162.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. aB]
          Length = 457

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 143/505 (28%), Positives = 226/505 (44%), Gaps = 57/505 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              ++VS L+  ++ ++E  +  V +  EIS +    +SGH YF+LKD+ +++   +++ 
Sbjct: 7   ANIFTVSRLNTTVRQLLEKEMGLVWISAEISNFT-QPASGHWYFTLKDDGAQVRCAMFRN 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +  ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E  K KL  EG
Sbjct: 66  SNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIAESMHPAGEGLLQQQFELLKAKLATEG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  QHK P+P   + + VITS TGA + D+L+ +  R P L V+I+P  VQG + P  I
Sbjct: 126 LFDPQHKQPLPEPARQVGVITSSTGAALHDVLRVLHRRDPSLPVVIYPTVVQGVDAPAAI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHE
Sbjct: 186 VRAIEIANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  +      L
Sbjct: 240 TDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRLYTRL 299

Query: 311 LKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      L  +R +    RL + L   +E  +    R  + +  R+ +      + +
Sbjct: 300 EHRLQQQHPQLRLARQQTALFRLQQRLGEAMETRLRHATRQQDRLSQRLNAQQPQQRLFE 359

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +      ++Q + Q L                                        
Sbjct: 360 AQKQLQNWHYRLQQSITQQLNSNRQH---------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L+  +   TL RG++   DT    + +   L +   +   
Sbjct: 386 -------------FGQLVAQLEGVSPLATLARGFSVTTDTTGQVVKKTAQLQSGDLLRTR 432

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQ 513
             DG   + V    P K++  K   
Sbjct: 433 LDDGWVESQVTQLLPEKKRRRKTAS 457


>gi|260773380|ref|ZP_05882296.1| exodeoxyribonuclease VII large subunit [Vibrio metschnikovii CIP
           69.14]
 gi|260612519|gb|EEX37722.1| exodeoxyribonuclease VII large subunit [Vibrio metschnikovii CIP
           69.14]
          Length = 440

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 226/492 (45%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   Y+VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 2   TNPNIYTVSRLNAEVRLLLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG    + F P+ G + LV  +++ +     YQIIIES+ P G G L    E+ K +L  
Sbjct: 61  KGNNRSVSFKPQNGQQVLVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFEQLKMRLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P  P+ + VITS TGA + DILQ +  R P L +II+P  VQG E   
Sbjct: 121 EGLFAQSLKKTLPEHPRCVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTIVQGSEAAI 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA AI   N+  E       D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+G
Sbjct: 181 SIAQAIGCANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      + + S+   + +L N I      + N L 
Sbjct: 235 HEVDVTIADFVADMRAPTPSAAAELVSRDNSNKKQSVNQKQHQLTNSIRYYFAQQKNQLQ 294

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   R +LD L  +L   ++  +    +  +   +R++       +
Sbjct: 295 QLQHRLDKQHPAHRLQRQRQQLDELTLQLTQVMQRRLMLLAKGVSQQQHRLQLRSPEKQL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              +  ++  Q  + +                                            
Sbjct: 355 SAQKHQLMMSQHQLRKA------------------------------------------- 371

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  ++       +     L + +   TL RGY+  Q+ +   I  K  + +   I+
Sbjct: 372 ----MERQLLDAQHRYARLVDKLHTVSPLATLSRGYSITQNEHGEVIHTKDQVQSGEVIV 427

Query: 487 INFFDGQANAIV 498
                G   + V
Sbjct: 428 TRLAQGDIRSTV 439


>gi|212638786|ref|YP_002315306.1| exodeoxyribonuclease VII large subunit [Anoxybacillus flavithermus
           WK1]
 gi|212560266|gb|ACJ33321.1| Exonuclease VII large subunit [Anoxybacillus flavithermus WK1]
          Length = 449

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 249/492 (50%), Gaps = 59/492 (11%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+ L+ ++K   E   +L  + ++GEIS +   HS GH YF+LKD  +RI A+++ G  
Sbjct: 8   TVAALTKYIKRKFEVDPHLQDLWIKGEISNFT-YHSRGHMYFTLKDEQARIQAVMFAGYN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G+  LV G+I+ +  S  YQ+ ++ + P G G L  A E+ KKKL +EGLF
Sbjct: 67  RQLTFKPENGMTVLVRGEISVYEPSGTYQVYVKEMQPDGVGALYLAYEQLKKKLEQEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           + +HK PIP  P+ I V+TSPTGA IRDIL  I  R+PL +VI+FP  VQG++ P  I  
Sbjct: 127 AKEHKKPIPKFPQHIGVVTSPTGAAIRDILTTIRRRYPLAKVILFPTLVQGEQAPLSIVQ 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I + N +         D++I+ RGGGSIE+LW FN+E++ RAI  S +PIISA+GHETD
Sbjct: 187 SIQKANDIGY------IDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    L S + + +ARL       +  +   L SL  
Sbjct: 241 YTIADFVADLRAPTPTGAAELAVPHVADLLSRVSDQQARLIRATKERLNAEQKRLQSLRS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +       +LD L   L+  +  ++ +K      +   + +      I+K  
Sbjct: 301 SYAFRYPKRLYEQKEQQLDMLVDRLQRQMNDMLKQKEHKLQQLQLTLFAHHPQSRIEKAA 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             I   QQ I + +   ++                                         
Sbjct: 361 DRIRTLQQTIVRNMNDVMK----------------------------------------- 379

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                     S++ T   L + +    ++RGY+   D     I     L T  R+ I F 
Sbjct: 380 ------QKKWSLATTMAKLDALSPLKIMERGYSLAYDEQETLIKTVTQLQTGDRVHIRFQ 433

Query: 491 DGQANAIVINKA 502
           DG+A+ IV N  
Sbjct: 434 DGRAHCIVSNIE 445


>gi|120554649|ref|YP_959000.1| exodeoxyribonuclease VII large subunit [Marinobacter aquaeolei VT8]
 gi|120324498|gb|ABM18813.1| Exodeoxyribonuclease VII large subunit [Marinobacter aquaeolei VT8]
          Length = 451

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 152/506 (30%), Positives = 233/506 (46%), Gaps = 58/506 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P+           +VSEL++  +H++ES+   V V GE+SG+    SSGH YFSLKD  
Sbjct: 3   TPYPDTRPRA---LTVSELNHQARHLLESSFMQVWVEGELSGF-SRPSSGHWYFSLKDQK 58

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
            +I   +++G   +I  LP EG +  + GK+T +     +QII+E L P+G G L  A E
Sbjct: 59  CQIRCAMFRGANQRIRTLPREGDQIRIRGKVTLYENRGDFQIIVEHLEPAGLGALQQAFE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K +L  EGLF    K PIP  P+ I V+TSPTGA I DIL  +  R P + V ++P  
Sbjct: 119 ALKARLQGEGLFDPARKKPIPATPRHIGVVTSPTGAAIHDILTVLKRRCPAIPVTLYPTA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  AI +       +     D++I+ RGGGS+EDLW FN+E + RAIA   
Sbjct: 179 VQGQPATADIVQAIDR------AQQHGLADVLIIGRGGGSLEDLWCFNEEAVARAIAACP 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP +SA+GHE D T+AD+ ADLRAPTP+ AAE   P ++     L   + RL     RL+
Sbjct: 233 IPTVSAVGHEVDVTIADFVADLRAPTPSAAAEKISPDQQDWLRRLTEQQGRLGQSARRLL 292

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   N L  L   L +  + L     R+D L   L   +   + ++ +  ++++ R+ + 
Sbjct: 293 QRLDNQLGHLSARLRDPRRELLEKAQRMDELELRLNKAIRDRLDQQKQKTDYLLQRMSAQ 352

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                ++  R+     ++ +    +  LR      +                        
Sbjct: 353 SPRRTLKTVREQTQRLEERLTLATRHQLRQKDERLQH----------------------- 389

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY  ++D N+  + +  +L 
Sbjct: 390 ------------------------IAQTLHVVSPLVTLGRGYAIVKDDNDRIVRKAGDLE 425

Query: 481 TKTRILINFFDGQANAIVINKAPPKE 506
           T ++I      G  +A V       E
Sbjct: 426 TGSQITARLGHGSVSARVTEINSSSE 451


>gi|183599370|ref|ZP_02960863.1| hypothetical protein PROSTU_02839 [Providencia stuartii ATCC 25827]
 gi|188021608|gb|EDU59648.1| hypothetical protein PROSTU_02839 [Providencia stuartii ATCC 25827]
          Length = 459

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 140/512 (27%), Positives = 238/512 (46%), Gaps = 57/512 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
               +   YSVS+L+  ++ +++  +  + +  EIS +    SSGH Y +LKD+ +++ A
Sbjct: 2   STQQNSGIYSVSKLNQAVRELLDRQMGKIWLTAEISNF-SQPSSGHWYLTLKDDKAQVRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV   +T +     YQIIIES+ P+G G L    E  K+ 
Sbjct: 61  AMFRGQNARVTFRPQNGQQVLVRASVTLYEPRGDYQIIIESMQPAGEGLLQQRFELLKQM 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K I VITS TGA + DIL  +  R P L V+I+P  VQGD+
Sbjct: 121 LGAEGLFDVTHKQPLPSPAKRIGVITSATGAALHDILHILRRRDPSLPVVIYPTAVQGDQ 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +IA AI   N   E       D++I+ RGGGS+EDLW FN+E++ RAI  S +PI+S
Sbjct: 181 APAQIARAIELANKRGE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFASRLPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ AD+RAPTP+ AAE+    +  L   L + + RL   +   +  +  
Sbjct: 235 AVGHETDITIADFVADVRAPTPSAAAELVSRNQVELIRQLHSAQQRLEMAMDYYLAGQQQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             + L   L      L  +R +     L ++L   +   +       + +  R+    L 
Sbjct: 295 RFSRLQHRLQQQHPQLRLARQQHQLSLLNQKLTQTITRRLQTAQLRHDQLQRRLSQQDLR 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +Q+  + + + Q H++ +                                        
Sbjct: 355 PQLQRQHRSLQQTQYHLQNM---------------------------------------- 374

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  ++  + S     ++    +++ +   TL RG++  + ++   + +   +    
Sbjct: 375 -------MTELLNSYKQRFAVACSKMETVSPLATLARGFSISETSDGAVLKKTSQVKLGQ 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515
           ++     DG   + V +    K +   +  L 
Sbjct: 428 KLKTRLNDGWVESEVTDITKMKMKRAPRSVLK 459


>gi|319898458|ref|YP_004158551.1| exodeoxyribonuclease VII large subunit [Bartonella clarridgeiae 73]
 gi|319402422|emb|CBI75963.1| exodeoxyribonuclease VII large subunit [Bartonella clarridgeiae 73]
          Length = 475

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 212/530 (40%), Positives = 306/530 (57%), Gaps = 56/530 (10%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+ F +K+   +  E+SVSE++  LK +VE    +V VRGEISGYRG+H+SGHAYF+LKD
Sbjct: 1   MDLFIEKSVVTNVAEFSVSEIAGALKRVVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +R++A+IW+G + K++F PEEGIE + +GK+TT+ GSSKYQIIIE+L P+G G L+T 
Sbjct: 61  DKARLEAVIWRGVIEKLQFPPEEGIEVVAVGKLTTYQGSSKYQIIIETLEPTGVGALMTL 120

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LE RKKKL +EG F D  K  +P++P+II VITSPTGAVIRDI+ RIS RFPL ++++PV
Sbjct: 121 LENRKKKLADEGFFDDAKKKTLPYMPRIIGVITSPTGAVIRDIIHRISDRFPLHILVWPV 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +E+A AI   N L       +PD+II+ARGGGS+EDLW FNDE +V A++ S
Sbjct: 181 RVQGETSGREVAAAITGFNALPLDGVLSKPDLIIVARGGGSLEDLWGFNDEAVVHAVSAS 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK  L++ L +L  R    + R 
Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKFDLETRLASLSLRFRVGLARY 300

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             +    L+S+++ LP  DQ  +  R   D +   L+  L +   +K  +F  ++ R+  
Sbjct: 301 FSFYKQKLSSVVRGLPTVDQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLCP 360

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L  NI+  +Q+  E    +                                       
Sbjct: 361 RLL--NIETAQQNTKEYTVRLH-------------------------------------- 380

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + +  R+L++ +Y++ L+RG+       N  I +    
Sbjct: 381 ---------HAFLRSVEKQRVQIEMAFRLLKNTSYQSILERGFVLALGQENKPIKRLVQF 431

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
               +I + FFDG+ N    N AP      K+       ++++  QG LF
Sbjct: 432 PRAVKISLRFFDGEINVSTCNSAP------KQFPKPRRLKQQRDDQGTLF 475


>gi|294501202|ref|YP_003564902.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium QM
           B1551]
 gi|294351139|gb|ADE71468.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium QM
           B1551]
          Length = 447

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 146/492 (29%), Positives = 231/492 (46%), Gaps = 58/492 (11%)

Query: 15  YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ ++K    V+ ++  V ++GEIS ++  HS GH YF+LKD ++RI A+++ G 
Sbjct: 8   LTVTALTRYIKRKFDVDPHMQDVWIKGEISNFK-RHSRGHMYFTLKDQNARIAAVMFAGH 66

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ F PEEG+  L+  +I+ +  S  YQ+ ++ + P G G L  A E+ KKKL +EGL
Sbjct: 67  NRQLNFQPEEGMNVLIRAEISVYEPSGNYQMYVKEMQPDGVGNLYLAYEQLKKKLEKEGL 126

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192
           F    K  +P  P  I VITSPTGA +RDI+  +  R+   +I+ P  VQG      I  
Sbjct: 127 FDPARKRKLPKYPTTIGVITSPTGAAVRDIITTLKRRYNANIIVMPALVQGVNAAPSIIK 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI + N  KE       D++I+ RGGGSIE+LW FN+E + RAI  S+IP+ISA+GHETD
Sbjct: 187 AIEEANRRKEA------DVLIVGRGGGSIEELWAFNEESVARAIFTSNIPVISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    +   L     RL   +  +++     L    K
Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHISEITERLTQRNIRLLRSMKEMLQSSSRRLERSQK 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       + +     +LD+L           I  K  ++  +   +  +   H + K  
Sbjct: 301 SYAFRYPQKLVEQKEQQLDQLMERFYREGRRYIEHKRTNYEQLTAALLRNHPEHQLTKAA 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   +                                               L   +   
Sbjct: 361 ERQQQ-----------------------------------------------LTKMLTKE 373

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +K      +  T  L + +   T++RGY+ + D     I   + ++    + +   
Sbjct: 374 MQQLLKQKQLLFATATSKLHTLSPLKTMERGYSLVYDKEKELIKSTKQVSKGDVVNVRLT 433

Query: 491 DGQANAIVINKA 502
           DGQ    V    
Sbjct: 434 DGQLQCEVSKIE 445


>gi|332185492|ref|ZP_08387240.1| exodeoxyribonuclease VII, large subunit [Sphingomonas sp. S17]
 gi|332014470|gb|EGI56527.1| exodeoxyribonuclease VII, large subunit [Sphingomonas sp. S17]
          Length = 473

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 177/518 (34%), Positives = 255/518 (49%), Gaps = 75/518 (14%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SV ELS  LK +VE    HV +RGEISGY+   +SGH Y SLKD ++ IDA++WKG  N
Sbjct: 26  LSVGELSLKLKRMVEGEFGHVRLRGEISGYK-RATSGHVYMSLKDENAVIDAVMWKGAAN 84

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F P++GIE +  G++TTFPG SKYQI++E +  +G+G L+   EK K KL  EGLF 
Sbjct: 85  TLPFQPQDGIEVIATGRLTTFPGRSKYQIVVERMELAGAGALMALFEKLKAKLAGEGLFD 144

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
              K  +PF+P +I V+TSPTGAVIRDIL R+  R P  VI++PVKVQG    +E+A A+
Sbjct: 145 RDRKRALPFMPPVIGVVTSPTGAVIRDILHRLEDRCPTHVIVWPVKVQGAGSAEEVAAAV 204

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              + ++ G   PRPD++I+ARGGGSIEDLW FN+E++VRA+A+ +IPIISA+GHETD T
Sbjct: 205 RGFDAIQPGGPVPRPDLVIVARGGGSIEDLWSFNEEIVVRAVADCAIPIISAVGHETDTT 264

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L DYAADLRAPTPT AAE+AVPV                                    L
Sbjct: 265 LCDYAADLRAPTPTAAAEIAVPV------------------------------------L 288

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +   T++  R R +R            + R       +   +        +   RQ   
Sbjct: 289 ADLRLTVASHRQRTERCA-------RRYVERGRERLEAMARLLPKRD--QLLGPQRQRAD 339

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SH 433
           E    +++ +                         + R+      + +    +   +   
Sbjct: 340 EAGARLDRGL-------------------------ERRVTLARGGLDRAGAALRPAILER 374

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLATKTRILINFFDG 492
           +++     ++ T R++QS      L+RGY           ++          + + F DG
Sbjct: 375 QVERGRDRLASTWRLVQSLNPDRILERGYARITARPGGETLSSAEAARAADTLTLRFRDG 434

Query: 493 QANAIVINKAPPKEQPTK--KCQLHNNKREKQGTQGEL 528
             +  V      +  P    K +        Q +Q  L
Sbjct: 435 TVDVAVDQGGLERPAPKTYDKPKREPKADPSQPSQPTL 472


>gi|15832625|ref|NP_311398.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. Sakai]
 gi|168748432|ref|ZP_02773454.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4113]
 gi|168756281|ref|ZP_02781288.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4401]
 gi|168761120|ref|ZP_02786127.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4501]
 gi|168768601|ref|ZP_02793608.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4486]
 gi|168773577|ref|ZP_02798584.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4196]
 gi|168778475|ref|ZP_02803482.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4076]
 gi|168787855|ref|ZP_02812862.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC869]
 gi|168798880|ref|ZP_02823887.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC508]
 gi|195936651|ref|ZP_03082033.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. EC4024]
 gi|208809494|ref|ZP_03251831.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4206]
 gi|208812852|ref|ZP_03254181.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4045]
 gi|208821962|ref|ZP_03262282.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4042]
 gi|209400584|ref|YP_002271979.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4115]
 gi|254794455|ref|YP_003079292.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. TW14359]
 gi|261223059|ref|ZP_05937340.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261259390|ref|ZP_05951923.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. FRIK966]
 gi|291283730|ref|YP_003500548.1| Exodeoxyribonuclease 7 large subunit [Escherichia coli O55:H7 str.
           CB9615]
 gi|22095662|sp|Q8XAB0|EX7L_ECO57 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694648|sp|B5Z0X8|EX7L_ECO5E RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|13362841|dbj|BAB36794.1| exonuclease VII large subunit [Escherichia coli O157:H7 str. Sakai]
 gi|187770677|gb|EDU34521.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4196]
 gi|188017041|gb|EDU55163.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4113]
 gi|189003418|gb|EDU72404.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4076]
 gi|189356589|gb|EDU75008.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4401]
 gi|189362272|gb|EDU80691.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4486]
 gi|189368359|gb|EDU86775.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4501]
 gi|189372263|gb|EDU90679.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC869]
 gi|189378658|gb|EDU97074.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC508]
 gi|208729295|gb|EDZ78896.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4206]
 gi|208734129|gb|EDZ82816.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4045]
 gi|208742085|gb|EDZ89767.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4042]
 gi|209161984|gb|ACI39417.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. EC4115]
 gi|209763428|gb|ACI80026.1| exonuclease VII large subunit [Escherichia coli]
 gi|209763430|gb|ACI80027.1| exonuclease VII large subunit [Escherichia coli]
 gi|209763432|gb|ACI80028.1| exonuclease VII large subunit [Escherichia coli]
 gi|209763434|gb|ACI80029.1| exonuclease VII large subunit [Escherichia coli]
 gi|209763436|gb|ACI80030.1| exonuclease VII large subunit [Escherichia coli]
 gi|254593855|gb|ACT73216.1| exonuclease VII, large subunit [Escherichia coli O157:H7 str.
           TW14359]
 gi|290763603|gb|ADD57564.1| Exodeoxyribonuclease 7 large subunit [Escherichia coli O55:H7 str.
           CB9615]
 gi|320188842|gb|EFW63501.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. EC1212]
 gi|320640853|gb|EFX10341.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. G5101]
 gi|320646296|gb|EFX15223.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H-
           str. 493-89]
 gi|320651801|gb|EFX20181.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H-
           str. H 2687]
 gi|320657187|gb|EFX24996.1| exodeoxyribonuclease VII large subunit [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320662793|gb|EFX30125.1| exodeoxyribonuclease VII large subunit [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320667597|gb|EFX34512.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. LSU-61]
 gi|326340307|gb|EGD64111.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. 1125]
 gi|326344991|gb|EGD68735.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           str. 1044]
          Length = 456

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N       C   D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQ------CNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454


>gi|167623307|ref|YP_001673601.1| exodeoxyribonuclease VII large subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|189037840|sp|B0TLJ2|EX7L_SHEHH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|167353329|gb|ABZ75942.1| exodeoxyribonuclease VII, large subunit [Shewanella halifaxensis
           HAW-EB4]
          Length = 445

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 136/492 (27%), Positives = 217/492 (44%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN S+I   ++KG  
Sbjct: 8   VYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAMFKGRN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL  EGLF
Sbjct: 67  QAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLAAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192
           +   K  +P   + I V+TSPTGA IRDIL  ++ R   + VII+P  VQG +  K I +
Sbjct: 127 ASDTKRSLPANIQRIGVVTSPTGAAIRDILHVLARRDASIEVIIYPTPVQGTDAAKSICD 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N+ +E       D++++ RGGGS+EDLW FNDE +   + NS IP++SA+GHE D
Sbjct: 187 AINLANSRRE------VDVLLVTRGGGSLEDLWSFNDEGLAHTLYNSGIPVVSAVGHEVD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY ADLRAPTP+  AE+     ++    L++  +RL          K N L +   
Sbjct: 241 MTISDYVADLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQSWQHYQLKKQNQLQACEH 300

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +  + L       D +   L+  ++  +        ++ +R+ S    H +    
Sbjct: 301 RLQKQDPQRRLQMYEQSFDEMQLRLQQAMQTKLHAYTLKQQNLSSRLASQSPQHRLDLEA 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +      +   +                                   +K    R+   
Sbjct: 361 QRLSYLSAKLNGAMI--------------------------------DKLKMSEQRL--- 385

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                       +   + L + +   TL RGY+         +    +      +     
Sbjct: 386 ------------AHRAQQLDTVSPLATLSRGYSITLTGEGKVVQSPSDTCVGDTLTTRLR 433

Query: 491 DGQANAIVINKA 502
           DG   + V+   
Sbjct: 434 DGSVTSTVVEVG 445


>gi|238785328|ref|ZP_04629317.1| Exodeoxyribonuclease 7 large subunit [Yersinia bercovieri ATCC
           43970]
 gi|238713781|gb|EEQ05804.1| Exodeoxyribonuclease 7 large subunit [Yersinia bercovieri ATCC
           43970]
          Length = 459

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 144/510 (28%), Positives = 227/510 (44%), Gaps = 57/510 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++   +
Sbjct: 4   SSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K+KL 
Sbjct: 63  FRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   +K  +P   K + VITS +GA + DILQ +  R P L VII+P  VQG + P
Sbjct: 123 AEGLFDQTNKQSLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIIYPTAVQGADAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+
Sbjct: 183 LQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +    
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQQF 296

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      L  +R +    +L R L  + +  I    R    +  R+        
Sbjct: 297 SRLEHRLQQQHPHLRLARQQTLLLKLQRRLAESAQNQIRLLGRRSEKLQQRLVQAQPQGQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  Q + +++  + Q                                           
Sbjct: 357 IHRYHQRVQQQEYRLRQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L  ++        I    L++ +   TL RGY+  Q      +   R +    ++
Sbjct: 374 ----ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPAGALLKSTRQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515
                DG   + +      K+   +K    
Sbjct: 430 TTRLQDGWVESKITQINVAKKPRQRKAAKE 459


>gi|146308505|ref|YP_001188970.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina ymp]
 gi|145576706|gb|ABP86238.1| Exodeoxyribonuclease VII large subunit [Pseudomonas mendocina ymp]
          Length = 476

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 232/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF++ N LD    SVS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 21  DPFARLN-LDREVLSVSQLNNRARLLLEDVFSGIWVEGEISNL-ARPASGHVYFTLKDSQ 78

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 79  AQVRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLILDAVEPAGDGALRLAFE 138

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K  +P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 139 ALKEKLGAEGLFSTERKIALPAHPRRIGIITSPTGAVIRDIISVFRRRAPQVELNLIPTA 198

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+ + + L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 199 VQGREATAQIVRALQRADAL-------GFDALILARGGGSLEDLWCFNEESVARAVAACV 251

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD ++AD+ AD+RAPTP+ AAE+  P    L   L NL+ RL   +   +
Sbjct: 252 TPIVSAVGHETDVSIADFVADVRAPTPSAAAELLAPDSSELVQRLHNLQRRLVLHMQGRL 311

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+ + + L +  + L     RLD L   L       +  +Y     +  R+ + 
Sbjct: 312 ARERLRLDGVSRRLRHPGERLRQQAQRLDDLDMRLRRAFAQRLANQYERLARLDARLAAQ 371

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N+   RQ +      + + ++  LR                               
Sbjct: 372 HPGRNLALLRQRLDGLAARLPRAMQGQLRSQRQ--------------------------- 404

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +      LQ  +   TL RGY+ + D     +       
Sbjct: 405 --------------------QLGALAAQLQIVSPLATLGRGYSILLDERGQAVRSAAQTQ 444

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+ +  V +
Sbjct: 445 PGQRLKARLSEGELDVRVED 464


>gi|226940029|ref|YP_002795102.1| exodeoxyribonuclease VII large subunit [Laribacter hongkongensis
           HLHK9]
 gi|226714955|gb|ACO74093.1| XseA [Laribacter hongkongensis HLHK9]
          Length = 568

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 135/492 (27%), Positives = 234/492 (47%), Gaps = 57/492 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           ++ +   SVSEL+   + ++E+ +  V + GEIS    + +SGHAYFSLKD  ++I A++
Sbjct: 123 TIQNNIISVSELNRIARELLETAIPPVWISGEISNLT-LAASGHAYFSLKDERAQIRAVM 181

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++  L+++ F P+EG+   V G ++ +     YQI +  +  +G G L  A E  K +L 
Sbjct: 182 FRNRLSQLGFRPKEGLRVEVRGTVSLYEARGDYQINVSQMQEAGLGALYAAFEALKTRLA 241

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF +Q K P+P  PK+I ++TS   A +RD+L  +  R P + V+++P +VQGD  P
Sbjct: 242 AEGLFDNQLKRPLPAHPKVIGIVTSLQAAALRDVLTTLRRRAPQIPVVLYPTQVQGDTAP 301

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   +  ++       D++I+ RGGGSIEDLW FNDE + RAI    +P+IS +
Sbjct: 302 AQILAAIEAASRRQDA------DVLIVCRGGGSIEDLWAFNDEQVARAIRACRLPVISGV 355

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+AAD+RAPTPT AAE+  P ++ L +                        
Sbjct: 356 GHETDFTIADFAADVRAPTPTAAAELVSPDRDALLA------------------------ 391

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                              RL  L   L   +   + R  +  + +   ++       I 
Sbjct: 392 -------------------RLAELDFRLGRAMHHRLDRASQQLDRLA--LRLTHPGERIA 430

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R+ + + +  + Q    H        + ++  L     + +         +     ++
Sbjct: 431 RQRERLAQAEYRLHQ----HWARRQELARLRVVHLQTRLLRARPSQERQQALLASNRQQL 486

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +S +++  H  ++  +  L +   +  L RGY  +++     +     LA   R+ +
Sbjct: 487 ARAISTQLERQHHRLAALSARLDALDPQAVLARGYAIVENARGQAVLDPAALAQNERVTL 546

Query: 488 NFFDGQANAIVI 499
               G   A + 
Sbjct: 547 RLALGNTGARID 558


>gi|297519643|ref|ZP_06938029.1| exodeoxyribonuclease VII large subunit [Escherichia coli OP50]
          Length = 438

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 142/490 (28%), Positives = 227/490 (46%), Gaps = 57/490 (11%)

Query: 24  LKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEG 83
           ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   +++ +  ++ F P+ G
Sbjct: 1   VRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHG 59

Query: 84  IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143
            + LV   IT +     YQII+ES+ P+G G L    E+ K KL  EGLF  Q+K P+P 
Sbjct: 60  QQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPS 119

Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202
               + VITS TGA + DIL  +  R P L VII+P  VQGD+ P +I  AI   N   E
Sbjct: 120 PAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNE 179

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
                  D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+GHETD T+AD+ ADL
Sbjct: 180 ------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETDVTIADFVADL 233

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
           RAPTP+ AAE+    ++ L   + +   RL   +   +  +      +   L      L 
Sbjct: 234 RAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLR 293

Query: 323 CSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            +R +   +RL + +   LE  + R  +    +  R+        I + +  I + +  +
Sbjct: 294 LARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRL 353

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            +                                                L  ++ +   
Sbjct: 354 AE-----------------------------------------------TLRAQLSATRE 366

Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
                   L++ +  +TL RGY+    T+ N + + + +     +     DG   + V N
Sbjct: 367 RFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKN 426

Query: 501 KAPPKEQPTK 510
             P K+   K
Sbjct: 427 IQPVKKSRKK 436


>gi|326941961|gb|AEA17857.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 453

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 159/499 (31%), Positives = 243/499 (48%), Gaps = 60/499 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119

Query: 128 -LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
             EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+ 
Sbjct: 120 EEEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGES 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I  AI   N ++E       D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIIS
Sbjct: 180 AAPSIVQAIRTANEMRE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  L+  K  
Sbjct: 234 AVGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMKELVHKKEE 293

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L  L K+       Q       +LDR   +L    E  I +K      +   ++     
Sbjct: 294 KLQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPS 353

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   Q+ +++ +                                       
Sbjct: 354 QKIIQTKVAVETLQKQLQREM--------------------------------------- 374

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                      +++   +     + L++ +    + RGY  + D     +   ++++   
Sbjct: 375 --------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGD 426

Query: 484 RILINFFDGQANAIVINKA 502
            + +   DG  +  V    
Sbjct: 427 AVSVQLQDGILDCSVSGIE 445


>gi|157376257|ref|YP_001474857.1| exodeoxyribonuclease VII large subunit [Shewanella sediminis
           HAW-EB3]
 gi|189037812|sp|A8FY06|EX7L_SHESH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157318631|gb|ABV37729.1| Exodeoxyribonuclease VII [Shewanella sediminis HAW-EB3]
          Length = 442

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 140/491 (28%), Positives = 217/491 (44%), Gaps = 57/491 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN ++I + ++KG
Sbjct: 6   NNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNFAQIRSAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ+IIES++P+G G L    E  K KL  EG
Sbjct: 65  RNRSVTFKPVNGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGLLAQQYEALKMKLAAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
           LF+   K P+P   + I VITS TGA I+D+L  ++ R   + V+I+P +VQGD   K I
Sbjct: 125 LFAADTKRPMPTNIQKIGVITSATGAAIKDVLHVLARRDSSIEVVIYPTQVQGDSASKSI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N  +E       D+++L RGGGS+EDLW FN+E +   I NS++PI+SA+GHE
Sbjct: 185 CKAIQTANARQE------VDVLLLTRGGGSLEDLWCFNNEDLAHEIYNSALPIVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     E+    L    ARL                SL
Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSGDAENKSEKLATFIARLKQSWQHYQLKTEQRSRSL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      + L   +   D +   L   L   + +       +  R+      H +  
Sbjct: 299 ENRLHRQDPKRKLEQFQQSFDEIQIRLNAALNDKLHKSTLQQQSLSYRLNQQSPQHRLTL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +H+      +                                                
Sbjct: 359 ESKHLDYLTARL-----------------------------------------------N 371

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +  K+     S+  +   L++ +   TL RGY+  QD +   +   ++      I   
Sbjct: 372 EGIKGKLNDVEMSLKNSAHQLETVSPLATLSRGYSITQDESGKVLLSSKDTQAGDTITTR 431

Query: 489 FFDGQANAIVI 499
             DG+  + VI
Sbjct: 432 LLDGEVKSTVI 442


>gi|261820582|ref|YP_003258688.1| exodeoxyribonuclease VII large subunit [Pectobacterium wasabiae
           WPP163]
 gi|261604595|gb|ACX87081.1| exodeoxyribonuclease VII, large subunit [Pectobacterium wasabiae
           WPP163]
          Length = 464

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 139/521 (26%), Positives = 231/521 (44%), Gaps = 58/521 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+ F          ++VS L+  ++ ++E  +  + + GEIS      SSGH YF+LKD 
Sbjct: 1   MSQFPSSA-----IFTVSRLNQAVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  K+ F P+ G + L+   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K++L  EGLF  Q K  +P   K + VITS +GA + DILQ +  R P L VI++P 
Sbjct: 115 EQLKQRLAAEGLFEQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG + P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 SVQGADAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+  DLRAPTP+ AAE+    +  L   + +   RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +      L   L      L  +R +                                
Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQQT------------------------------- 317

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 + K RQ + +  +   Q+ +   R   L+++           + + R       
Sbjct: 318 -----QLVKLRQRLDDAMKQ--QLRQASRRSERLQQRLMQQQPQTRIHRAQQR------- 363

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +++L  +++  +  ++      + +    L+  +   TL RGY      + N +     +
Sbjct: 364 LQQLSYQMQSAVDRQLNQNKQKLGVACSRLEGVSPLATLARGYNVTTAPDGNVLKNVAQI 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520
                +     DG   + V    P      K+ +  +   +
Sbjct: 424 IPGETLKTRLQDGWVESQVTTLVPNPSSVKKRRKPSSQTPK 464


>gi|215487851|ref|YP_002330282.1| exodeoxyribonuclease VII large subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312965422|ref|ZP_07779654.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 2362-75]
 gi|254783699|sp|B7UGU7|EX7L_ECO27 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|215265923|emb|CAS10332.1| exonuclease VII, large subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312289842|gb|EFR17730.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 2362-75]
          Length = 457

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 146/508 (28%), Positives = 235/508 (46%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+++++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEIGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAEM    ++ L   + +++ RL   +   +  +   
Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L      L  +R +   +RL + +   ++  I R  +    ++ R+       
Sbjct: 296 LTLLHHRLQQQHPQLRLARQQTALERLQQRMNLAIDSQIKRTNKRQVRLLQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   +  + +                                          
Sbjct: 356 RIHRVQSRIQHLEHRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + + + + T   
Sbjct: 374 -----HVHSRLSAMRERFGNAVTHLEAVSPLSTLARGYSVTTVTDGKVLKKVKQVKTGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V      K    KK 
Sbjct: 429 MTTRLEDGWVKSEVKGITSAKRAQKKKP 456


>gi|114319854|ref|YP_741537.1| exodeoxyribonuclease VII large subunit [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226248|gb|ABI56047.1| Exodeoxyribonuclease VII large subunit [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 458

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +  +      Y+VS+L+  ++ ++E+ L  + V GEIS       SGH YF+LKD+ ++
Sbjct: 2   VTTASQAPRTVYTVSQLNQEVRSLLETTLPPLWVEGEISNL-ARPRSGHLYFTLKDSAAQ 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++     + F P +G   LV  +   +P   ++Q++++ +  +G G L  A E  
Sbjct: 61  VRCAMFRNRNLLLRFQPGDGQRVLVRARAGLYPARGEFQLVVDHMEEAGEGALRRAFEAL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L +EGLF   HK P+P  P+ + VITSPTGA IRD+L  +  RFP L V+I+PV VQ
Sbjct: 121 KARLEQEGLFDPAHKRPLPAFPRRLGVITSPTGAAIRDVLTVLRRRFPALPVLIYPVPVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+    +IA AI + +  ++       D++++ RGGGS+EDLW FN+E++ RAI    +P
Sbjct: 181 GEGAGGQIAAAIEEADRRRD------VDVVLVTRGGGSLEDLWAFNEEVVARAIHACGLP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SA+GHE D T++D  AD RAPTP+ AAE+  P    L   +  L  RL  +  +  + 
Sbjct: 235 VVSAVGHEVDVTISDLVADQRAPTPSAAAELISPDGPALLHQVRGLRDRLLQLTTQHHRR 294

Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             + LN L + L   +  Q L     RLD L + L H +   + R  +  +H+  R++  
Sbjct: 295 ASDRLNGLARRLQARHPGQLLRDRSQRLDELDQRLRHAMAQRLARHTQALDHLRARLRQG 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I++  +  L  ++ +   V+Q                                  
Sbjct: 355 DPRLTIRRREEQRLALERRLHAAVRQ---------------------------------- 380

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNL 479
                        ++++    +S   R L + +   TL RGY   +   +   +     +
Sbjct: 381 -------------QLQAREQRLSGLGRALHAVSPLATLSRGYAIARQGADGPVLRDSTQV 427

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
           A    + +    GQ +  V       E
Sbjct: 428 APGDAVRVRLHRGQLDCRVERVHGEPE 454


>gi|51597150|ref|YP_071341.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis
           IP 32953]
 gi|186896244|ref|YP_001873356.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis
           PB1/+]
 gi|81825750|sp|Q668A6|EX7L_YERPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697624|sp|B2K9P2|EX7L_YERPB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|51590432|emb|CAH22072.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis
           IP 32953]
 gi|186699270|gb|ACC89899.1| exodeoxyribonuclease VII, large subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 459

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K + VITS +GA + D+L  +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L   L      L  +R                                        
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
               +  +L+ Q+ +E+  +  +R   L K+ +     + + Q + +I   +  +++   
Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   +  ++        I    L++ +   TL RGY+  Q      +   + +    ++
Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + +      K+   KK
Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455


>gi|153949399|ref|YP_001400174.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis
           IP 31758]
 gi|166919635|sp|A7FFZ6|EX7L_YERP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|152960894|gb|ABS48355.1| exodeoxyribonuclease VII, large subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 458

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K + VITS +GA + D+L  +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQPLPRPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L   L      L  +R                                        
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
               +  +L+ Q+ +E+  +  +R   L K+ +     + + Q + +I   +  +++   
Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   +  ++        I    L++ +   TL RGY+  Q      +   + +    ++
Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + +      K+   KK
Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455


>gi|170023547|ref|YP_001720052.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis
           YPIII]
 gi|226697626|sp|B1JSA8|EX7L_YERPY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169750081|gb|ACA67599.1| exodeoxyribonuclease VII, large subunit [Yersinia
           pseudotuberculosis YPIII]
          Length = 459

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K + VITS +GA + D+L  +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRTQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L   L      L  +R                                        
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
               +  +L+ Q+ +E+  +  +R   L K+ +     + + Q + +I   +  +++   
Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   +  ++        I    L++ +   TL RGY+  Q      +   + +    ++
Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + +      K+   KK
Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455


>gi|228998972|ref|ZP_04158554.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock3-17]
 gi|228760589|gb|EEM09553.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock3-17]
          Length = 452

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKC-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE+G++ LV GKI+ +  S  YQI +  + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K PIP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIIATIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N +K+       D +I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIQTANEMKD------IDALIVGRGGGSIEELWAFNEEMVARAIFASEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  ++  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRTMREMLHKKQEQ 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +L K+       Q       +LDR   +L    E  + +K      +   ++      
Sbjct: 294 LQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVEKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ ++                                       
Sbjct: 354 KIVQTKTRVETLQKQLQREMQ--------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  +       +   +++     
Sbjct: 375 --------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGLVYSEKKQVLKSVKDVDLGDV 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGVLDCNVSGIE 444


>gi|331653937|ref|ZP_08354938.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M718]
 gi|331048786|gb|EGI20862.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M718]
          Length = 456

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454


>gi|323188151|gb|EFZ73444.1| exodeoxyribonuclease VII, large subunit [Escherichia coli RN587/1]
          Length = 457

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 145/508 (28%), Positives = 234/508 (46%), Gaps = 57/508 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K  +P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAEM    ++ L   + +++ RL   +   +  +   
Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L      L  +R +   +RL + +   ++  I R  +    ++ R+       
Sbjct: 296 LTLLHHRLQQQHPQLRLARQQTALERLQQRMNLAIDSQIKRTNKRQVRLLQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   +  + +                                          
Sbjct: 356 RIHRVQSRIQHLEHRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +  ++ +           L++ +  +TL RGY+    T+   + + + + T   
Sbjct: 374 -----HVHSRLSAMRERFGNAVTHLEAVSPLSTLARGYSVTTVTDGKVLKKVKQVKTGDV 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           +     DG   + V      K    KK 
Sbjct: 429 MTTRLEDGWVKSEVKGITSAKRAQKKKP 456


>gi|22125260|ref|NP_668683.1| exodeoxyribonuclease VII large subunit [Yersinia pestis KIM 10]
 gi|45442510|ref|NP_994049.1| exodeoxyribonuclease VII large subunit [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108808307|ref|YP_652223.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Antiqua]
 gi|108811429|ref|YP_647196.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516]
 gi|145599489|ref|YP_001163565.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides
           F]
 gi|149365332|ref|ZP_01887367.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CA88-4125]
 gi|162420118|ref|YP_001605016.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Angola]
 gi|165925952|ref|ZP_02221784.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937111|ref|ZP_02225676.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008069|ref|ZP_02228967.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212567|ref|ZP_02238602.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399227|ref|ZP_02304751.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421186|ref|ZP_02312939.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423724|ref|ZP_02315477.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218929932|ref|YP_002347807.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CO92]
 gi|229838449|ref|ZP_04458608.1| exonuclease VII, large subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895150|ref|ZP_04510326.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides
           A]
 gi|229899016|ref|ZP_04514160.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901688|ref|ZP_04516810.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516]
 gi|270489882|ref|ZP_06206956.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis KIM D27]
 gi|294504565|ref|YP_003568627.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Z176003]
 gi|22095669|sp|Q8ZCU2|EX7L_YERPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122383061|sp|Q1C5J4|EX7L_YERPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122384960|sp|Q1CK84|EX7L_YERPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158514099|sp|A4TMT0|EX7L_YERPP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697625|sp|A9R7Z4|EX7L_YERPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|21958131|gb|AAM84934.1|AE013738_11 exonuclease VII, large subunit [Yersinia pestis KIM 10]
 gi|45437375|gb|AAS62926.1| exodeoxyribonuclease VII large subunit [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108775077|gb|ABG17596.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516]
 gi|108780220|gb|ABG14278.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Antiqua]
 gi|115348543|emb|CAL21483.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CO92]
 gi|145211185|gb|ABP40592.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides
           F]
 gi|149291745|gb|EDM41819.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CA88-4125]
 gi|162352933|gb|ABX86881.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis Angola]
 gi|165914974|gb|EDR33586.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922156|gb|EDR39333.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992451|gb|EDR44752.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206498|gb|EDR50978.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960675|gb|EDR56696.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051731|gb|EDR63139.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057894|gb|EDR67640.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229681617|gb|EEO77711.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516]
 gi|229687961|gb|EEO80033.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694815|gb|EEO84862.1| exonuclease VII, large subunit [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701912|gb|EEO89935.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides
           A]
 gi|262362440|gb|ACY59161.1| exodeoxyribonuclease VII large subunit [Yersinia pestis D106004]
 gi|262366553|gb|ACY63110.1| exodeoxyribonuclease VII large subunit [Yersinia pestis D182038]
 gi|270338386|gb|EFA49163.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis KIM D27]
 gi|294355024|gb|ADE65365.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Z176003]
 gi|320016006|gb|ADV99577.1| exonuclease VII, large subunit [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 459

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K + VITS +GA + D+L  +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQPLPHPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L   L      L  +R                                        
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
               +  +L+ Q+ +E+  +  +R   L K+ +     + + Q + +I   +  +++   
Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   +  ++        I    L++ +   TL RGY+  Q      +   + +    ++
Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + +      K+   KK
Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455


>gi|82777894|ref|YP_404243.1| exodeoxyribonuclease VII large subunit [Shigella dysenteriae Sd197]
 gi|309784740|ref|ZP_07679373.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1617]
 gi|123561921|sp|Q32D53|EX7L_SHIDS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81242042|gb|ABB62752.1| exonuclease VII, large subunit [Shigella dysenteriae Sd197]
 gi|308927110|gb|EFP72584.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1617]
          Length = 456

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + +AI  S IP++SA
Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVAQAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWVESEVKNIQPIKKSRKK 454


>gi|317049127|ref|YP_004116775.1| exodeoxyribonuclease VII large subunit [Pantoea sp. At-9b]
 gi|316950744|gb|ADU70219.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. At-9b]
          Length = 452

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 139/508 (27%), Positives = 235/508 (46%), Gaps = 59/508 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S   + +   ++VS L+  ++ ++E+ +  V +  EIS +    +SGH YF+LKD+ ++
Sbjct: 1   MSLPPTAN--IFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++ +  ++ F P+ G + LV   IT +     YQ+IIES+ P+G G L    E+ 
Sbjct: 58  VRCAMFRNSNRRVAFRPQHGQQVLVRASITLYEPRGDYQLIIESMHPAGEGLLQQQFEQL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L  EGLF  Q K P+P   + + VITS TGA + D+L+ +  R P L V+I+P  VQ
Sbjct: 118 KTRLAAEGLFDQQFKQPLPDPARQVGVITSATGAALHDVLRVLHRRDPSLPVVIYPTAVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G + P  I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S +P
Sbjct: 178 GVDAPAAIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRLP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  
Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRRLQSQQQRLEMAMDYYLAQ 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +      +L  L      L  +R      +L ++L   ++  +    R  + ++ R+   
Sbjct: 292 QQRRYTRILHRLQQQHPQLRLARQHTALLQLQQKLHEAMDQRLRSANRQQDRLLQRLNVQ 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I + +Q + + Q  ++Q ++                                   
Sbjct: 352 QPQPRILRAQQQLQQWQYRLQQGMQ----------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                       +++             L+  +   TL RG++   DT  + + + + ++
Sbjct: 377 ------------NQLNQHRQRFGTLAAQLEGVSPLATLARGFSVTTDTQGHVVKKMQQVS 424

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQP 508
               +     DG   + V    P K   
Sbjct: 425 KGDLLRTRLDDGWVESEVTALTPRKSAR 452


>gi|228992928|ref|ZP_04152852.1| Exodeoxyribonuclease 7 large subunit [Bacillus pseudomycoides DSM
           12442]
 gi|228766785|gb|EEM15424.1| Exodeoxyribonuclease 7 large subunit [Bacillus pseudomycoides DSM
           12442]
          Length = 452

 Score =  366 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKC-HSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE+G++ LV GKI+ +  S  YQI +  + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K PIP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N +K+       D +I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA
Sbjct: 180 APSIVQAIQTANEMKD------IDALIVGRGGGSIEELWAFNEEMVARAIFASEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    RL   +  ++  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMREMLHKKQEQ 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +L K+       Q       +LDR   +L    E  + +K      +   ++      
Sbjct: 294 LQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVEKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  +   Q+ +++ ++                                       
Sbjct: 354 KIVQTKTRVETLQKQLQREMQ--------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +++   +     + L++ +    + RGY  +       +   +++     
Sbjct: 375 --------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGLVYSEKKQVLKSVKDVGLGDV 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGVLDCSVSGIE 444


>gi|240140681|ref|YP_002965161.1| putative exonuclease VII, large subunit OB-fold nucleic acid
           binding domain [Methylobacterium extorquens AM1]
 gi|240010658|gb|ACS41884.1| putative exonuclease VII, large subunit OB-fold nucleic acid
           binding domain [Methylobacterium extorquens AM1]
          Length = 523

 Score =  365 bits (937), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 201/550 (36%), Positives = 284/550 (51%), Gaps = 69/550 (12%)

Query: 2   NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            P        + PE+SV +L+  LK  +E    HV +RGEI+GYRG H SGHAYFSLKD 
Sbjct: 21  EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++IDA++WKG L ++   P+EG+E +  GKITTF G S YQI+I+S+ P+G G  +  L
Sbjct: 81  SAKIDAVVWKGVLGRLRQKPKEGLEVIATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+RK++L  EGLF    K PIPF+P++I V+TSPTGAVIRDIL R+  RFP  V+++PV+
Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+   +EIA AI   N L      PRPD++I+ARGGGSIEDLW FN+E +VRA A S 
Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+  L + +  L AR    ++R I
Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +     +L++A+P +D  L+  R RLD                       + +     
Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L  N + +R+ +      + +      R   +   E  A L  +  + +  +  +    
Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +   T +L + +YK  L RGY  ++D +   +      A
Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSADAAA 453

Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKREK-------------- 521
              R  + F DG   A          APP  +  +          +              
Sbjct: 454 RAARFQLQFADGALFARPEEAPDDPVAPPLVEAPRSAPRPKRAPRRAAPEPAPKPEKAAA 513

Query: 522 --QGTQGELF 529
                QG LF
Sbjct: 514 EPAARQGSLF 523


>gi|50122132|ref|YP_051299.1| exodeoxyribonuclease VII large subunit [Pectobacterium atrosepticum
           SCRI1043]
 gi|81827053|sp|Q6D286|EX7L_ERWCT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|49612658|emb|CAG76108.1| exodeoxyribonuclease VII large subunit [Pectobacterium atrosepticum
           SCRI1043]
          Length = 462

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 139/519 (26%), Positives = 230/519 (44%), Gaps = 58/519 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+ F          ++VS L+  ++ ++E  +  + + GEIS      SSGH YF+LKD 
Sbjct: 1   MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  ++ F P+ G + ++   IT +     YQ++ ES+ P+G G L    
Sbjct: 55  RAQVRCAMFRTSNRRVTFRPQNGQQIIIRATITLYEPRGDYQLLAESMQPAGDGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K++L  EGLF  Q K  +P   K + VITS +GA + DILQ +  R P L VI++P 
Sbjct: 115 EQLKQRLAAEGLFDQQFKQVLPSPAKQVGVITSVSGAALHDILQVLQRRDPSLPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 SVQGAEAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+AD+  DLRAPTP+ AAE+    +  L   + +   RL   +   
Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +      L   L      L  +R                                  
Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQ--------------------------------- 315

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 + K RQ + +  Q   Q+ +   R   L+++           + + R       
Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTSRRSERLQQRLMQQQPQTRIHRAQQR------- 363

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +++L  +++  +  ++      + +    L+  +   TL RGY     ++   +     +
Sbjct: 364 LQQLSYQMQSAVDRQLNQNKQKLGVACSRLEGVSPLATLARGYNVTTASDGKVLKNVAQI 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
                +     DG   + V   AP      K+ +  +  
Sbjct: 424 TPGETLKTRLQDGWVESQVTTLAPNLSSVKKRRKSSSQS 462


>gi|114046810|ref|YP_737360.1| exodeoxyribonuclease VII large subunit [Shewanella sp. MR-7]
 gi|123326712|sp|Q0HX52|EX7L_SHESR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|113888252|gb|ABI42303.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. MR-7]
          Length = 448

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 144/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ I+E  L  V + GEIS +    SSGH Y +LKD++S+I   ++KG
Sbjct: 6   NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL  +G
Sbjct: 65  RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K  +P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+     I
Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGESADLNI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     ++    L  + +RL          +   L+ L
Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSANHYQLKQERRLSLL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      +TL     R D +   LE  L   +    R    + NR++     H +  
Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEKQSPKHKLAL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +      ++  ++                                           
Sbjct: 359 ETNRLNYLATRLQDAMQD------------------------------------------ 376

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 +      +      L++ +   TL RGY+   D NN  I     L+   +I   
Sbjct: 377 -----TLNQSEQRIKYAAHQLETVSPLATLSRGYSITTDANNQIIDNAAQLSVGDKINTR 431

Query: 489 FFDGQANAIVINKAPPK 505
              GQ  + V       
Sbjct: 432 LRHGQVQSTVTQITDES 448


>gi|325142529|gb|EGC64929.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           961-5945]
          Length = 451

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++              
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRP---------- 351

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   +     +I  L T +    S
Sbjct: 352 ---------------------------------------DVSVCKNNIVCLQTALPAAFS 372

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 373 QLLTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|237749550|ref|ZP_04580030.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes
           OXCC13]
 gi|229380912|gb|EEO31003.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes
           OXCC13]
          Length = 444

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 243/495 (49%), Gaps = 57/495 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             P  +VSEL+     I+E +   + V GEIS      +SGH YF+LKDN++++ +++++
Sbjct: 4   STPVLTVSELNSTAAKILEHSFPLLWVSGEISNLT-KAASGHWYFTLKDNNAQVRSVMFR 62

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F+P++G +  V   +T +    ++Q+ +E++  +G G+L  A  + K KL +E
Sbjct: 63  GKAQSVGFIPKDGDKVEVRAVVTLYTARGEFQLNVEAMRHAGLGSLYEAFLRLKAKLGDE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF ++ K  +P   + I ++TSP  A +RDIL  +S R P + VI++P  VQG++   +
Sbjct: 123 GLFDEERKRNLPVFARTIGIVTSPQAAALRDILTTLSRRAPHVNVILYPTPVQGEDAAGK 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA+A+   +   E       D++++ RGGGSIEDLW FN+E++ RAIA  SIP IS +GH
Sbjct: 183 IASAVTLASVRAE------CDVLLICRGGGSIEDLWSFNEEVVARAIATCSIPTISGVGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+T+AD+AAD+RAPTPTGAAEMA    +    +L  L   L   + RL++      + 
Sbjct: 237 ETDFTIADFAADVRAPTPTGAAEMASRAHQDWMDNLETLADDLRMAMERLLRNAFQNTDL 296

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L + L +    +   + RL  L  +L H  + I+   +   NH+  R+K+          
Sbjct: 297 LARRLISPSSYIEREKIRLQSLAAKLTHTNDTILASSHYRLNHLGTRLKAQLPDTRH--- 353

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
                                                           + ++  + +++ 
Sbjct: 354 ----------------------------------------------YRSLLETGLHKMKT 367

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  ++K     +S   + L+  + K TL+RGY  I + N   +     L  +  + +  
Sbjct: 368 GIDTQLKQRKQEISSLAQQLELLSTKRTLERGYAIITNRNGQIVRSPSQLPVRKPLSVQL 427

Query: 490 FDGQANAIVINKAPP 504
            +G A   +    P 
Sbjct: 428 AEGSAQISIETVQPE 442


>gi|37526604|ref|NP_929948.1| exodeoxyribonuclease VII large subunit [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|81833959|sp|Q7N3K2|EX7L_PHOLL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|36786036|emb|CAE15088.1| Exodeoxyribonuclease VII large subunit (exonuclease VII large
           subunit) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 457

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/505 (27%), Positives = 234/505 (46%), Gaps = 57/505 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +   +SVS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD  +++ A +
Sbjct: 4   PFNTGIFSVSRLNQTVRQLLEMEMGRIWLSAEISNF-SHPSSGHWYFTLKDERAQVRAAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ +  ++ F P+ G + LV   IT +     YQ+I+E++ P+G G L    E  K+KL 
Sbjct: 63  FRSSNQRVTFRPQNGQQVLVRAIITLYEPRGDYQLIVENMQPAGDGLLQQQFELLKQKLD 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF   HK P+P   + + VITS +GA + DIL  +  R P L +II+P  VQG E P
Sbjct: 123 AEGLFDQSHKKPLPSPAQQLGVITSTSGAALHDILNILKRRDPSLPIIIYPTSVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI +S IPI+SA+
Sbjct: 183 LQIIRAIELANERRE------CDVLIVGRGGGSLEDLWSFNDERVARAIFHSDIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   + + + RL   +      K +  
Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQQQRLEMAMDYFFAQKQHIF 296

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      L  +R +     L + L  +L+  + +    +  +  R+        
Sbjct: 297 SLLSHRLQQQHPHLRLARQQNLLVNLRQRLTDSLQRYLKQNSLAYEKLQQRLWYAEPSQQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I    Q I ++   + Q                                           
Sbjct: 357 IHHYSQQIQQQDFRLRQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +  +I       +++   +++ +   TL RGY+  Q ++   + Q + +     +
Sbjct: 374 ----AIERQISRSREKFAVSCSRMEAVSPLATLARGYSISQTSDGKLLKQTKQVDVGDVL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTK 510
                DG   + V+     +++ + 
Sbjct: 430 NTRLQDGWIESEVLKIKKERKKRSA 454


>gi|114569179|ref|YP_755859.1| exodeoxyribonuclease VII large subunit [Maricaulis maris MCS10]
 gi|114339641|gb|ABI64921.1| Exodeoxyribonuclease VII large subunit [Maricaulis maris MCS10]
          Length = 485

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 188/532 (35%), Positives = 284/532 (53%), Gaps = 56/532 (10%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              + +  E++VSEL+  LK  VE    HV +RGE+ G   +  SGH YF +KD+ + I 
Sbjct: 2   NTPAGNIHEFTVSELAGSLKRTVEDAFGHVRLRGEL-GRVVVAKSGHVYFDIKDDKAVIA 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           +I WKGT  +  F PEEG+E ++ G+++T+PG S+YQ+I+ES+ P+G+G L+  LE+RK+
Sbjct: 61  SIAWKGTAQRFRFRPEEGLEVVIEGRLSTYPGRSQYQLIVESMEPAGAGALMALLEERKR 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
            L  EGLF    K  +PF+P+ I V+TSPTGAVIRDIL R+  RFP  V+++PV VQGD 
Sbjct: 121 TLAAEGLFETSRKQALPFLPRTIGVVTSPTGAVIRDILHRLQDRFPCHVLLWPVLVQGDS 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IA AI   N L  G   PRPD++I+ARGGGSIEDLW FN+E++VRA A+S+IP+IS
Sbjct: 181 AAAQIAEAIRGFNALPAGGKVPRPDVLIVARGGGSIEDLWAFNEEVVVRAAADSTIPLIS 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+A+D RAPTPTGAAEMAVPV+  L++SL  L  RL   + R I+ +  
Sbjct: 241 AVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELKASLDQLGGRLVAGLSRHIERRRT 300

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L S  +ALP     +   R R D +  +L+  L      K      +   +K   L  +
Sbjct: 301 ELRSAARALPRPAALMELKRQRFDMIADKLDPALLNHAAEKRGRLLVLAAGLKPAALSRD 360

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++ R  + E+   +    ++  R    +                               
Sbjct: 361 LRQKRTLLDERAARLGPAAERLRRDRQRDLDN-------------------------WSA 395

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+                      ++ ++++ LKRG+  ++D     +    +L     I
Sbjct: 396 RL----------------------EALSHQSVLKRGFVLVRDRAGKLVRSGGSLMEGAGI 433

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK--------CQLHNNKREKQGTQGELF 529
            + F DG+  A +  +   +++P +          +     + +   QG LF
Sbjct: 434 DLVFADGERAARIEGERGSRKRPPETPDLPKKTKPKPKPRSKPEAAGQGRLF 485


>gi|308050450|ref|YP_003914016.1| exodeoxyribonuclease VII large subunit [Ferrimonas balearica DSM
           9799]
 gi|307632640|gb|ADN76942.1| Exodeoxyribonuclease VII large subunit [Ferrimonas balearica DSM
           9799]
          Length = 444

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S  +  ++VS L+  +K ++E     + + GEIS    + SSGH YF+LKD+ S++   +
Sbjct: 2   SASNAVFTVSALNRQIKALLEQQWGRIWLSGEISNL-AMPSSGHWYFTLKDDRSQLRCAM 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K    ++ F PE G++ LV   +T +      Q+++ES+ P+G G L    E  K +L 
Sbjct: 61  FKSRTARVGFRPEHGMQVLVRANLTMYEPRGDLQLVVESMQPAGDGLLQQRFEALKMQLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+ + K  +P   + + VITSP+GA ++D+L  +  R P L VII+P +VQG E  
Sbjct: 121 AEGLFAMEAKQCLPHPIRRLGVITSPSGAAVQDVLSVLKRRDPMLEVIIYPSQVQGAEAT 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N   E       D I+L RGGGS+EDLW FN+E + RAI +S +PI+SA+
Sbjct: 181 GQICQAIATANARDE------VDAILLTRGGGSLEDLWCFNEEAVARAIYHSRLPIVSAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+ADY ADLRAPTP+ AAE+           L     RL   I   ++ +   L
Sbjct: 235 GHEVDTTIADYVADLRAPTPSAAAELLSQDAGLRLDRLQRDRQRLAQAIGAQLRGQQQRL 294

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L   +  + L     RLD L   L+  +   + ++ +    +  R+        
Sbjct: 295 VLLATRLNGNHPSRKLEQHAQRLDELSLRLDRAMTAQVSQRAQTVERLEARLNRFHPTPR 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +    Q +   +  + + + Q L    L    +                           
Sbjct: 355 LAALGQQLNGLEHRLNRAIGQQLHQGRLTLAGR--------------------------- 387

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                                  L++ +    L RGY+ +QD     I     +    R+
Sbjct: 388 --------------------AAALEAVSPLAVLSRGYSILQDEQGQTIKSTEQVEVGQRL 427

Query: 486 LINFFDGQANAIVINKA 502
                 G     V +  
Sbjct: 428 TARLHQGSLGLKVTDTE 444


>gi|229086755|ref|ZP_04218921.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-44]
 gi|228696576|gb|EEL49395.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-44]
          Length = 452

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K PIP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI + N + E       D++I+ RGGGSIE+LW FN+E + RAI  S+IPIISA
Sbjct: 180 APSIVQAIRKANEMNE------IDVLIVGRGGGSIEELWAFNEESVARAIFTSAIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++    R+   +  ++  +   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNILELQEKVLQRTLRMQRAMREMVHKRQEQ 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +L K+       Q       +LDR   +L       I +K      +   ++      
Sbjct: 294 LQTLQKSYAFRYPRQVYEQKEEQLDRALEQLMLAKGRYIDKKVNQLQQLSFYLEKHHPSQ 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I   Q+ I++ ++  ++                                   
Sbjct: 354 KILQTKTKIEILQKQIQREMQTLMQTKEFAFMR--------------------------- 386

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                 + L++ +    + RGY  +       +   + ++    
Sbjct: 387 --------------------AAQKLEALSPLKIMMRGYGLVYSEEKQVLKSVKGVSLGDG 426

Query: 485 ILINFFDGQANAIVINKA 502
           + +   DG  +  V    
Sbjct: 427 VSVQLQDGVLDCNVAGIE 444


>gi|209544981|ref|YP_002277210.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532658|gb|ACI52595.1| exodeoxyribonuclease VII, large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 486

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 161/499 (32%), Positives = 258/499 (51%), Gaps = 32/499 (6%)

Query: 2   NPFSQKNSL---DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
            P     +    + PEYSVSE+S  ++  +E     V VRGEI+ ++    SGH YFSLK
Sbjct: 3   EPLRDSGTAGAGNVPEYSVSEISGAIRRTLEGTFGRVRVRGEITEFKRYP-SGHLYFSLK 61

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D   +I +++W+G+++++   PE G+E +  GKI+++   S YQ+II+ L  +G G LL 
Sbjct: 62  DEGGKISSVVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLA 121

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            +E+ + KL  EGLF    K  +PF+P +I V+TS  GAV+ DI   I+ RFP R++++P
Sbjct: 122 RIERLRLKLAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVWP 181

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG+    +IA AI   + +      PRPD++I+ARGGGS+EDL  FNDE+++RA A 
Sbjct: 182 VAVQGEAAAAQIAAAIAGFDAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAAA 241

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             IP+ISA+GHETD TL D+ +D RAPTPT AAE+A P +  L + L +  ARL + + R
Sbjct: 242 CRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLAR 301

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           L +     L+     LP+    L  +R RLD     L+  L  ++ R+      +   + 
Sbjct: 302 LTQTLRLRLDRAAARLPDLPSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAMP 361

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           S  L+            ++  +          +    ++  A     R +          
Sbjct: 362 SASLL---------TGPRRARLALAASHLQSGLRQALRDGHARADRTRLRPAP------- 405

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                       L+  ++     ++     L+S +    L+RGY  ++D     +T+  +
Sbjct: 406 ------------LAAMLRERRAHLAGLAGRLESLSPMAVLERGYVLVRDPAGVPVTRAAD 453

Query: 479 LATKTRILINFFDGQANAI 497
           +    R+++ F DG+A   
Sbjct: 454 VRPGGRLVLIFADGEAAVR 472


>gi|331005661|ref|ZP_08329028.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC1989]
 gi|330420519|gb|EGG94818.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC1989]
          Length = 452

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 149/500 (29%), Positives = 239/500 (47%), Gaps = 55/500 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN    +NS      SVS+L+   K ++E++ + V V GEIS      SSGH YFSLKDN
Sbjct: 1   MNTLLTENSPKKTLLSVSQLNRRAKQLLETHFAFVWVSGEISNL-AKPSSGHWYFSLKDN 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++K    ++ + PE G +  +  +++ + G  +YQ+I+E +  +G G L    
Sbjct: 60  AAQVRCAMFKNANQRLRWTPESGQQVSIRARVSLYEGRGEYQLIVEHMEMAGDGQLQQQY 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K  L +EGLF + +K  +P  P+ I +ITSPTGA + DIL  +  R+P+  + IFPV
Sbjct: 120 ERLKATLSDEGLFDESYKKNLPIYPRHIGIITSPTGAAVHDILSVLRRRYPIAPISIFPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD    EI NAI + N L       R D+IIL+RGGGSIEDLW FNDE + R I  S
Sbjct: 180 SVQGDNAAPEIINAIKKANKL------ERCDVIILSRGGGSIEDLWAFNDETLARTIFAS 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHE D+T+AD+ AD+RAPTP+ +AEM  P +  L       ++RL     + 
Sbjct: 234 NIPVISAVGHEVDFTIADFVADVRAPTPSVSAEMTTPDQHELAQLFDRYQSRLLRSFQQS 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           I+ + + +N L K L +  + +   + +LD   + L   +     ++         ++ S
Sbjct: 294 IQSRTDRINFLNKRLRHPGERIQRQQQQLDHFQQRLVSAIHSQTRQQQNTLQQTKQKLFS 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +      + + VKQ ++                              
Sbjct: 354 QHPQGKLEKQKSKLENLSFLLIKSVKQSVKNKRQ-------------------------- 387

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                 +     +LQ+ +    L RGY+  +  +   I   + +
Sbjct: 388 ---------------------ELIKKASVLQAISPLTVLSRGYSITRQHHGEVIKNTQLV 426

Query: 480 ATKTRILINFFDGQANAIVI 499
           +    I   F  G   + V 
Sbjct: 427 SIGDEISTRFSQGSITSTVT 446


>gi|205374082|ref|ZP_03226882.1| exodeoxyribonuclease VII large subunit [Bacillus coahuilensis m4-4]
          Length = 445

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 148/498 (29%), Positives = 244/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +    S+  L+ ++K   E +  L+ V +RGE+S ++  HSSGH YF+LKD+ +RI +I
Sbjct: 2   TEDRYLSIGALTKYIKRKFERDPHLTGVHIRGELSNFKS-HSSGHLYFTLKDDKARISSI 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++  +   ++F PE G++ LV G +T +    +YQI ++++ P G G L  A E+ K  L
Sbjct: 61  MFASSAKSLKFNPENGMKVLVTGDVTVYESGGQYQIYVKTMEPDGIGALYLAYEQLKANL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF   HK P+P  P+++ V+TSPTGA +RDI+  I  R+P+ ++++ P  VQG + 
Sbjct: 121 EQEGLFDTAHKKPLPLYPRVVGVVTSPTGAAVRDIITTIKRRYPIAKILVLPALVQGGQA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI Q N++      P+ D+II+ RGGGSIE+LW FN+E + RAI  S++P+ISA
Sbjct: 181 APSIVKAIAQANSI------PKMDVIIVGRGGGSIEELWAFNEEAVARAIFQSNVPVISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305
           +GHETD+T+AD+ AD RAPTPT AAE+AVP  E +   +++ E RLN  +   I+     
Sbjct: 235 VGHETDFTIADFVADQRAPTPTAAAELAVPHIEEITERVLSRELRLNRAVNERIRQSQTA 294

Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
               +   AL N  +       RLDRL   L      ++ +K      +  R++      
Sbjct: 295 LKALTDSYALRNPKRLYEQHMERLDRLTESLGTEQNRMLDKKSEQLKGLARRLEFIHPGK 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   ++ +    +                                              
Sbjct: 355 AMSNQKEQLDRLTKQQ-------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
               + +   I+S    +     +L + +    L+RGY+ +       +     +    +
Sbjct: 371 ---NYHMKRMIESSQKELYRHIAMLDALSPLKILERGYSVLFSEEKQVVKSIAQVDRGDK 427

Query: 485 ILINFFDGQANAIVINKA 502
           I +   DG+    V+ K 
Sbjct: 428 INVRLADGELYCEVVEKE 445


>gi|162149287|ref|YP_001603748.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787864|emb|CAP57462.1| putative exodeoxyribonuclease VII large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 526

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 161/499 (32%), Positives = 258/499 (51%), Gaps = 32/499 (6%)

Query: 2   NPFSQKNSL---DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
            P     +    + PEYSVSE+S  ++  +E     V VRGEI+ ++    SGH YFSLK
Sbjct: 43  EPLRDSGTAGAGNVPEYSVSEISGAIRRTLEGTFGRVRVRGEITEFKRYP-SGHLYFSLK 101

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D   +I +++W+G+++++   PE G+E +  GKI+++   S YQ+II+ L  +G G LL 
Sbjct: 102 DEGGKISSVVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLA 161

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            +E+ + KL  EGLF    K  +PF+P +I V+TS  GAV+ DI   I+ RFP R++++P
Sbjct: 162 RIERLRLKLAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVWP 221

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG+    +IA AI   + +      PRPD++I+ARGGGS+EDL  FNDE+++RA A 
Sbjct: 222 VAVQGEAAAAQIAAAIAGFDAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAAA 281

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             IP+ISA+GHETD TL D+ +D RAPTPT AAE+A P +  L + L +  ARL + + R
Sbjct: 282 CRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLAR 341

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           L +     L+     LP+    L  +R RLD     L+  L  ++ R+      +   + 
Sbjct: 342 LTQTLRLRLDRAAARLPDLPSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAMP 401

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           S  L+            ++  +          +    ++  A     R +          
Sbjct: 402 SASLL---------TGPRRARLALAASHLQSGLRQALRDGHARADRTRLRPAP------- 445

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                       L+  ++     ++     L+S +    L+RGY  ++D     +T+  +
Sbjct: 446 ------------LAAMLRERRAHLAGLAGRLESLSPMAVLERGYVLVRDPAGVPVTRAAD 493

Query: 479 LATKTRILINFFDGQANAI 497
           +    R+++ F DG+A   
Sbjct: 494 VRPGGRLVLIFADGEAAVR 512


>gi|86136622|ref|ZP_01055201.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. MED193]
 gi|85827496|gb|EAQ47692.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. MED193]
          Length = 479

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 178/499 (35%), Positives = 270/499 (54%), Gaps = 28/499 (5%)

Query: 1   MNPFSQ--KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+      +   + PE+SVSELS  +K  +E     + VRGE+ G      SGH Y+ +K
Sbjct: 1   MSDLFDDPQPGQNAPEFSVSELSGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S +    WKG ++ +  +PEEG+E +V G++T F   SKY + ++ +  +G G L+ 
Sbjct: 60  DDRSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKK+L  EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+  RFP +V+++P
Sbjct: 120 LLEKRKKQLELEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRERFPRKVLVWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG  C  E+A+AI   N +  G   PRPD+II+ARGGG+IEDLW FN+E++ RA A 
Sbjct: 180 VAVQGANCAPEVAHAIEGFNKMTPGGALPRPDLIIVARGGGAIEDLWGFNEEVVARAAAA 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+  L + + +  ARL     +
Sbjct: 240 SDIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELMAWIEDQGARLLRGTGQ 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   LN L +A+P ++  L   R RLD+    L   L   + +++ + +     ++
Sbjct: 300 AVQQRRQRLNDLSRAMPRAESLLESPRQRLDQAGYNLPRALMSAVQQRHVNLSRASAGLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L + +Q+ R                             AI  +        I     
Sbjct: 360 PAALRNLVQRRRGQFE------------------------TAIAKLSPYPIAREISRQKA 395

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            ++KL  R+      ++      +    R L+  +YK TL RGY  ++      IT +  
Sbjct: 396 DLEKLTARMVAAQGVRMARQSHQLEAAGRQLEILSYKATLLRGYAVVRSGA-EVITTQAR 454

Query: 479 LATKTRILINFFDGQANAI 497
            A    + I F DG  +  
Sbjct: 455 AAAAPSLTIEFADGNLDVE 473


>gi|304407044|ref|ZP_07388698.1| exodeoxyribonuclease VII, large subunit [Paenibacillus
           curdlanolyticus YK9]
 gi|304344031|gb|EFM09871.1| exodeoxyribonuclease VII, large subunit [Paenibacillus
           curdlanolyticus YK9]
          Length = 458

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 160/504 (31%), Positives = 242/504 (48%), Gaps = 64/504 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M   S         YS+ EL+ ++K  +E++  L  V +RGEIS +   HSSGH YF+LK
Sbjct: 1   MTAMSNAPR----IYSIKELNRYIKMKLEADQLLGDVWLRGEISNFTH-HSSGHMYFTLK 55

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  SR+  I++      + F+P+EG + +  G I+ +     YQ  + ++ P G G+L  
Sbjct: 56  DRDSRLKCIMFASHNRSLPFIPKEGTKVIARGNISVYERDGNYQYYVTAMQPDGIGSLYL 115

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
           A E+ KKKL EEGLF    K  +P  P+ I VITSPTGA +RD++  +  R P + +I+ 
Sbjct: 116 AYEQLKKKLEEEGLFDHSRKRQLPTFPRAIGVITSPTGAAVRDVIITLQRRHPSVPIIVC 175

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV VQG    + I  AI  +N + E       D++I+ RGGGS+E+LW FN+E + RAIA
Sbjct: 176 PVLVQGTGAAQSIVQAIQFMNRMAET------DVLIVGRGGGSLEELWAFNEEAVARAIA 229

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           +S+IP+ISA+GHETD+T+AD+ ADLRA TPT AAE+AVP  E L+  L  L+ RL     
Sbjct: 230 SSTIPVISAVGHETDFTIADFVADLRAATPTAAAELAVPHIEELKRELDRLKHRLLQSAQ 289

Query: 298 RLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             ++ +   L  + +     +  + L     RLDRL   L    +  + R       +  
Sbjct: 290 LAVRTRRERLERVKRSPFFVHPRRYLLDQAQRLDRLEERLALLTQRRVERGRNRLMRLSQ 349

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            + ++     +    Q   EKQQ +   +                               
Sbjct: 350 SLFANHPGQAV----QLAAEKQQALRTRM------------------------------- 374

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFIT 474
                       E  L+ ++K     +S T R L + +    + RGY+ + D      I 
Sbjct: 375 ------------ETALASQLKQHKIRLSGTIRQLDALSPLKVMSRGYSLVYDEQEQKLIR 422

Query: 475 QKRNLATKTRILINFFDGQANAIV 498
               +     + I   DGQ +  V
Sbjct: 423 SVNEVQPGDLVRIKLKDGQLDCHV 446


>gi|315633789|ref|ZP_07889079.1| exodeoxyribonuclease 7 large subunit [Aggregatibacter segnis ATCC
           33393]
 gi|315477831|gb|EFU68573.1| exodeoxyribonuclease 7 large subunit [Aggregatibacter segnis ATCC
           33393]
          Length = 444

 Score =  364 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 229/498 (45%), Gaps = 57/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+  ++ ++E+ L  V + GEIS +     SGH Y SLKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P  G++ LV   ++ +     YQ+IIES+  +G G L+   E  K KL  
Sbjct: 60  RMKNLRVGFRPTNGMQVLVRASVSLYEPRGDYQLIIESMHLAGDGLLMQQFEALKVKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  HK  +P   K + +ITS TGA ++DIL  +  R P L+VII+P  VQG +   
Sbjct: 120 EGLFAQNHKKNLPHFSKAVGIITSQTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAT 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI +S+IPIISA+G
Sbjct: 180 EITQMIQLANQRQE------VDVLIVGRGGGSLEDLWCFNEEKVARAIFHSAIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    +  L   L   + R+   + R+   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQAELIQQLQYRQQRIEIALDRIFAEKKQQLQ 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +    L   +  + +L   L+ +L     +   +   +  R+  + L   I
Sbjct: 294 HLSLRLQHRHPQSQLRIQQQLITQLRHRLQQSLYHRWQKTAENLTALSARLYKNPLPLRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q++ Q + + +                                                 
Sbjct: 354 QQHEQRVAQLKVR----------------------------------------------- 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   ++ K+      ++     L S +    L RGY+  Q+     I     +    +I 
Sbjct: 367 LNSEMNLKLGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNAKYGTIKSINEVKIGEQIR 426

Query: 487 INFFDGQANAIVINKAPP 504
               DG+  + +      
Sbjct: 427 TRLTDGEIISQISQIEKK 444


>gi|332305589|ref|YP_004433440.1| exodeoxyribonuclease VII, large subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172918|gb|AEE22172.1| exodeoxyribonuclease VII, large subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 444

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 140/499 (28%), Positives = 235/499 (47%), Gaps = 58/499 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               +  +   ++VS+L++  + ++ES +  V +  EIS +    SSGH YF+LKDN ++
Sbjct: 1   MFSASPANRNIFTVSKLNHLARSVLESEIGQVWLSAEISNFVA-ASSGHWYFTLKDNRAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I + ++KG   K+   P+EG + LV   ++ +     YQ+I+E L P G G L    E  
Sbjct: 60  IKSAMFKGANRKVMTRPKEGDKVLVRANLSIYEPRGDYQLIVEHLEPEGEGQLKRQFEAL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+ L  +GLF+ Q+K  +P     I V+TS TGA + DIL  +  R P + V+I+P +VQ
Sbjct: 120 KQALSAQGLFASQNKQSLPSHISRIGVVTSATGAALHDILTVLKRRNPAVEVVIYPTQVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    ++I  AI   N  KE       D++I+ RGGGS+EDLW FN+E +  AI NS +P
Sbjct: 180 GVSASRQICRAIEIANQRKE------VDVLIVGRGGGSLEDLWCFNEENVAWAIHNSVLP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D T+AD+ ADLRAPTP+ AAE+    +  + ++L+    RL      LIK 
Sbjct: 234 IVSAVGHEVDVTIADFVADLRAPTPSAAAELVSQSQVEMLNTLLAKRDRLYKNARTLIKE 293

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 SL + L   +    L     R+D     + HN+   + R  +   ++ +++   
Sbjct: 294 LQYQQQSLSQELHAYHPKNQLRQHMQRVDNQLTAITHNMSTRLMRAKQSSINLSSKLSQF 353

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +++ +Q      Q + Q  +                                   
Sbjct: 354 SPKALLKEKQQTHSMLSQRLTQAWQ----------------------------------- 378

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                         ++    +++  + +L + +  +TL RGY+     ++  +  ++ L 
Sbjct: 379 ------------RGLEQRQLTLANASHLLDTVSPLSTLARGYSITF-KDDKVVKSQKALT 425

Query: 481 TKTRILINFFDGQANAIVI 499
               I   F DG+  + V 
Sbjct: 426 EGDVITNRFADGEVKSTVK 444


>gi|300722902|ref|YP_003712198.1| exonuclease VII large subunit [Xenorhabdus nematophila ATCC 19061]
 gi|297629415|emb|CBJ90016.1| exonuclease VII, large subunit [Xenorhabdus nematophila ATCC 19061]
          Length = 453

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 142/503 (28%), Positives = 231/503 (45%), Gaps = 53/503 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
               +   +SVS L+  ++ ++E  +  + +  E+S +    SSGH YF+LKD  ++I A
Sbjct: 2   SRPANTGIFSVSRLNQTVRQLLEMEMGRIWISAEMSNF-SQPSSGHWYFTLKDERAQIRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++    +  F P+ G + LV  +IT +     YQ+++ES+ P+G G L    E  K+K
Sbjct: 61  AMFRSQNLRATFRPQNGQQVLVRAQITLYEPRGDYQLLVESIQPAGDGLLQQQFEILKQK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K I VITS +GA + DIL  +  R P L +II+P  VQG E
Sbjct: 121 LAAEGLFDQIHKKPLPSPAKRIGVITSASGAALHDILNILKRRDPALPIIIYPTAVQGAE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+S
Sbjct: 181 APLQIIRAIELANVRQE------CDVLIVGRGGGSLEDLWCFNDEQVARAIFQSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D T+ D+ ADLRAPTP+ AAE+    +  L   + +L+ RL   +      K  
Sbjct: 235 AVGHEIDVTITDFVADLRAPTPSAAAELVSRNQIELLRQIQSLQQRLEMAMDYFFAQKQR 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             N L   L      L  +R +                     H   +  ++   FL   
Sbjct: 295 VFNGLQHRLQQQHPDLRLARQQ--------------------NHLAELRQKLIDSFLR-- 332

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                      +QH     K + R + +  + +I       +Q   R+            
Sbjct: 333 ---------CLKQHAISYEKWNQRLLHIHPEREIQYYSQSIQQLDFRL------------ 371

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
             +  +  ++       +++   +++ +   TL RGY+  + ++   + Q + +     +
Sbjct: 372 --KQAVERQLGRYREKFAVSCSRMEAVSPLATLSRGYSISEASDGKLLKQVKQVKVGDTL 429

Query: 486 LINFFDGQANAIVINKAPPKEQP 508
                DG   + V      +++ 
Sbjct: 430 KTRLQDGLVESQVTQVKKIRKKK 452


>gi|56551196|ref|YP_162035.1| exodeoxyribonuclease VII large subunit [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|59802896|sp|Q9FDL4|EX7L_ZYMMO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|56542770|gb|AAV88924.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 544

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 183/546 (33%), Positives = 296/546 (54%), Gaps = 38/546 (6%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                + +   +SVSE+S  LK  VE   SH+ VRGEISG+     SGH Y +LKD+ + 
Sbjct: 13  AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAV 71

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +D++IW+G +++I F PE G+E +  G++TT+ G S+YQ++IE L  +G G L+  L++R
Sbjct: 72  LDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           ++ L EEGLF+   K  +PF+PKII V++SP+GAVIRDIL R++ R P  VI++PV VQG
Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D+   ++A A+   + LK G   PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+
Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+  L + L NL  R+NN I R  K  
Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L ++ + LP+ ++ L+      D    +LE ++   +       N     ++   L 
Sbjct: 312 EERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLQ 371

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +      +    R +  E+++   +   L++  + R+ +     K L
Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425

Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
             +++                       +++ ++     ++    R+ +       L +G
Sbjct: 426 AEKLQPLLLEQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
           Y  ++D++++ ++   +  T  R+ + F DG                T       +   +
Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536

Query: 522 QGTQGE 527
              Q  
Sbjct: 537 PPEQTS 542


>gi|170725913|ref|YP_001759939.1| exodeoxyribonuclease VII large subunit [Shewanella woodyi ATCC
           51908]
 gi|226697608|sp|B1KLB9|EX7L_SHEWM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169811260|gb|ACA85844.1| exodeoxyribonuclease VII, large subunit [Shewanella woodyi ATCC
           51908]
          Length = 442

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 221/490 (45%), Gaps = 57/490 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS+L+  ++ ++E  L  V +  EIS +    SSGH Y +LKD+ ++I   ++KG
Sbjct: 6   NNVYTVSQLNGEVRQLLEGELGRVWLNAEISNFSS-PSSGHWYLTLKDHFAQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ+IIES++P+G G L    E  K KL  EG
Sbjct: 65  KNRTVTFRPANGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGMLAQQYEALKMKLAAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P     I VITS TGA ++D+L  ++ R P + V+++P +VQGD   K I
Sbjct: 125 LFATDTKRPLPTNINKIGVITSATGAALKDVLHVLARRDPSIEVVVYPTQVQGDNAAKLI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N  +E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CRAIELANARQE------VDVLLLTRGGGSLEDLWCFNSEDLAHCIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D +++DY AD+RAPTP+  AE+     +     LI   +RL           +    +L
Sbjct: 239 VDTSISDYVADVRAPTPSAGAELLSKDADDKAHKLIAGLSRLKQSWQHYQLKTVQKATAL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      + L       D +   L   L   I +      ++ +R+      H +  
Sbjct: 299 ENRLQRQDPKRRLEQFEQSFDEMQLRLNAALNSRIHKLALKQQNLSHRLSQQSPEHRLTL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             + +      + + +K  L  + L                                   
Sbjct: 359 EAKRLDYLTTRLNEGIKDKLHDVEL----------------------------------- 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                       S+  +   LQ+ +   TL RGY+  QD +   +   ++  T   +   
Sbjct: 384 ------------SLKNSAHQLQTVSPLATLSRGYSITQDESGKVLLNAKDAKTGDLLTTR 431

Query: 489 FFDGQANAIV 498
             +G+  + V
Sbjct: 432 LLEGELRSKV 441


>gi|92112850|ref|YP_572778.1| exodeoxyribonuclease VII large subunit [Chromohalobacter salexigens
           DSM 3043]
 gi|91795940|gb|ABE58079.1| Exodeoxyribonuclease VII large subunit [Chromohalobacter salexigens
           DSM 3043]
          Length = 448

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 138/486 (28%), Positives = 223/486 (45%), Gaps = 52/486 (10%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   + ++E       V GE+SG     +SGH YF+LKD+ +++    ++    
Sbjct: 9   LSVSELNRQARLMLERGFGDCWVEGEVSGV-ARPASGHIYFTLKDDRAQLRCAFFRNRAR 67

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            +    ++G    V G+++ F     YQ+I+E++  SG G LL A E+ K KL  EG+F+
Sbjct: 68  LMRTPLKDGDRLRVRGRVSVFEPRGDYQLIVEAVQASGEGELLAAFERLKAKLSAEGVFA 127

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           +     +P  P+ +A+ITSPTGA IRD+L  +  R+P L V I PV VQG E P  I  A
Sbjct: 128 NARP--LPCPPRHLAIITSPTGAAIRDVLAVLRHRWPSLEVTILPVPVQGREAPPAIIRA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I Q N           D +++ RGGGS+EDLW FNDE + RAI +S +P++SA+GHE D 
Sbjct: 186 IAQANQR-AQSPDDTVDALLVTRGGGSLEDLWAFNDEHLARAIHHSRLPVMSAVGHEVDV 244

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD+AAD RAPTP+ AAE  VP     ++ L   E  L   +   ++     L+     
Sbjct: 245 TLADFAADERAPTPSAAAERLVPDWREWRAQLQAAERGLTRAMQARLERDGQRLDHARAR 304

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  + L+  R RL+     L+  ++  + R+ +H   +  R++       I+  RQ +
Sbjct: 305 LRHPGERLAEQRRRLESWETRLQLAMQRRLDRERQHHETLTRRVERQDPRLAIETYRQRL 364

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              ++ +   +                                                 
Sbjct: 365 TTLERQLHTALP-----------------------------------------------R 377

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           ++      +    R L + +    L RGY  ++D + + +    +      +     +G+
Sbjct: 378 RLDQSRERLEALARELNAVSPLAVLGRGYAILEDDDRHIVRHAHDTQPGQTLTARLGEGR 437

Query: 494 ANAIVI 499
               V 
Sbjct: 438 LKVEVK 443


>gi|148263947|ref|YP_001230653.1| exodeoxyribonuclease VII large subunit [Geobacter uraniireducens
           Rf4]
 gi|189037846|sp|A5GF75|EX7L_GEOUR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|146397447|gb|ABQ26080.1| Exodeoxyribonuclease VII large subunit [Geobacter uraniireducens
           Rf4]
          Length = 446

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 153/504 (30%), Positives = 258/504 (51%), Gaps = 61/504 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F++K        +VS+L+  ++ ++E N   V V GEIS    +  SGH YF+LKD 
Sbjct: 1   MELFAEKR-----ILTVSQLNGLIRGVLEENFEQVWVEGEISNL-AMPHSGHLYFTLKDA 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  ++++ +   ++F P++G+  +V G+++ F    +YQ+I+E L P G G L  A 
Sbjct: 55  GAQVRCVMFRASSRALKFKPKDGMGLIVRGRVSVFEPRGEYQLIVEYLEPQGIGALQLAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K++L +EGLF++ HK PIP +P+ I V+TS TGA I DIL  ++ RF  ++V+I PV
Sbjct: 115 IQLKERLAKEGLFAETHKKPIPKLPQRIGVVTSATGAAIHDILNVLNRRFANVQVLIRPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+    EIA AI   N  +E       D++I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 175 KVQGEGAAGEIAAAIRDFNRYRE------IDVMIVGRGGGSLEDLWAFNEEVVARAIYES 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHE D+T+AD+ ADLRAPTP+ AAE+ V  K  L S L  L  RL   +   
Sbjct: 229 KIPVISAVGHEIDFTIADFVADLRAPTPSAAAELVVKSKAELASDLDALSHRLVLAMRHC 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     +N L +AL +    L     R+D L   ++H +++++ R+      + NR++ 
Sbjct: 289 LEDCWGDVNGLTRALKDPSLLLGHLAQRVDDLDERIKHAVQVMLLRRKEKAAFLQNRLRL 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +++ ++ +L     +E                                      
Sbjct: 349 QNPALQVEQGKELLLGYCARMEN------------------------------------- 371

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478
                      +   ++    + +++   L + +   TL RGY+ ++   + + I+    
Sbjct: 372 ----------TMERLLERARQAAAVSAGKLHALSPLATLARGYSIVRKLPDMSVISDSSQ 421

Query: 479 LATKTRILINFFDGQANAIVINKA 502
           +     + + F  G A+  V  K 
Sbjct: 422 VEPGDLLDLTFQQGGAHCRVETKH 445


>gi|117620910|ref|YP_856514.1| exodeoxyribonuclease VII, large subunit [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562317|gb|ABK39265.1| exodeoxyribonuclease VII, large subunit [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 454

 Score =  363 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 138/503 (27%), Positives = 237/503 (47%), Gaps = 57/503 (11%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
               S     ++V+ L+  ++ I+E +L  V + GE+S    + SSGH YFSLKD  +++
Sbjct: 6   EPSQSRQQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDMSAQV 64

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              ++KG   ++ F P++G++ LV  +++ +     YQ+IIES+ P+G G L    E+ K
Sbjct: 65  RCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFEELK 124

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           ++L  EGLF +  K P+P  P+ + +ITS TGA + D+L  +  R P L V I+P +VQG
Sbjct: 125 RRLGAEGLFDEGRKRPLPREPRAVGLITSATGAALHDMLTVLRRRAPDLPVFIYPTQVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                +I +AI   N   E       D++I+ RGGGS+EDLW FN+E + RAIA+S+IP+
Sbjct: 185 SAAIGQIVSAIALANRRAE------VDVLIVGRGGGSLEDLWCFNEEAVARAIAHSAIPV 238

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SA+GHE D T++D+AADLRAPTP+ AAE+  P +      L +L+ +L   + R     
Sbjct: 239 VSAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLKQQLLQAMNRQQTAA 298

Query: 304 INTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +    L K L +    + L     RLD L   L+  +   + +  R   ++  R++   
Sbjct: 299 RHDFILLQKRLDHQDPKRRLEQQSQRLDELSARLQQLMNHKLHQGERRLANLELRLQGKS 358

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               +   ++     ++ +  ++ +                                   
Sbjct: 359 PERLLAAGKRRHQLAEERLHALIAKRRDLAD----------------------------- 389

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                               +++ +  L   +   TL RGY+  +  +   I++   +  
Sbjct: 390 ------------------HRLAMLSARLDGVSPLATLGRGYSITRTQSGEVISRATQVDA 431

Query: 482 KTRILINFFDGQANAIVINKAPP 504
              ++    +GQ    V     P
Sbjct: 432 GQTLVTQLAEGQLWVRVEEVHQP 454


>gi|310815255|ref|YP_003963219.1| exodeoxyribonuclease VII, large subunit [Ketogulonicigenium vulgare
           Y25]
 gi|308753990|gb|ADO41919.1| exodeoxyribonuclease VII, large subunit [Ketogulonicigenium vulgare
           Y25]
          Length = 447

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 193/498 (38%), Positives = 269/498 (54%), Gaps = 52/498 (10%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M  F   K   + PE+SVSELS  +K +VE   +HV VRGE+ G     SSGH Y  LKD
Sbjct: 1   MELFEDEKPKDNAPEFSVSELSGAVKRMVEGEFAHVRVRGEL-GRISRPSSGHIYLDLKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S + A++WKG   ++   PEEG+E +  G++TTFPG SKYQ+IIE + P+G+G L+  
Sbjct: 60  DRSVLAAVVWKGQAARLSARPEEGLEVIATGRLTTFPGQSKYQMIIEDIAPAGAGALMAR 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           LEK K +L EEGLF    K PIPF+P++I VITSP+GAVIRDIL R+  RFP +VI++PV
Sbjct: 120 LEKLKAQLGEEGLFDPARKKPIPFLPEVIGVITSPSGAVIRDILHRLRDRFPRKVIVWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     E+A AI   N L  G   PRPD++I+ARGGGS+EDLW FN+E++VRA A S
Sbjct: 180 AVQGQAAAGEVARAIAGFNALTPGGAMPRPDLLIVARGGGSVEDLWAFNEEVVVRAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+  L + + +LEAR +  + ++
Sbjct: 240 DIPLISAVGHETDTTLIDYAADRRAPTPTAAAEMAVPVRMDLFAQMQSLEARQSRAMQQV 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L+ L +ALP +D  L+    RLD   + L+  L+  I  +          +  
Sbjct: 300 LTRRGQRLSDLSRALPRADALLAGQAQRLDFAAQRLDAALQTGIDARALRLARNA--LTP 357

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   I  + + I           ++ +R                              
Sbjct: 358 SVLRTRINNDLRTIDVLATRASAATERLMR------------------------------ 387

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                +V    R+ ++  Y  TLKRG+  ++  + +  T    L
Sbjct: 388 -----------------QKEQAVENIDRLRETLGYAATLKRGFAVVR-ADGHVATSTAAL 429

Query: 480 ATKTRILINFFDGQANAI 497
              T + +   DG+    
Sbjct: 430 EAATSVEVELTDGRVRIR 447


>gi|58040160|ref|YP_192124.1| exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H]
 gi|58002574|gb|AAW61468.1| Exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H]
          Length = 517

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 165/520 (31%), Positives = 269/520 (51%), Gaps = 21/520 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M         + P+YSVSE+S  +K  +ES    V VRGE++  +    SGH Y SLKD 
Sbjct: 2   MESDGASIRGNVPQYSVSEISGAIKRTLESGFGRVRVRGEVTELKRYP-SGHVYLSLKDE 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             +I  +IW+G+++++   PE G E +  G+++ +   S YQ++I+ +  +G G LL  +
Sbjct: 61  GGKIAGVIWRGSVSRLGMAPENGNEVIATGRVSAYGERSSYQLVIDRMEFAGEGALLANI 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+ ++KLLEEGLF  + K  IPF+P ++ VITS +GAV+ DI+  IS RFP  V+++PV 
Sbjct: 121 ERLRRKLLEEGLFEPERKKAIPFLPSLVGVITSRSGAVLHDIITTISRRFPRDVLLWPVP 180

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    +IA AI  ++  +       PD++I+ARGGGS+EDL  FNDE ++RA+AN  
Sbjct: 181 VQGEGAAAQIAAAIEGMSVRRPR----TPDVLIVARGGGSLEDLMAFNDERVLRAVANCP 236

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +PIISA+GHETD TL D  +D RAPTPT AAEMAVP++  + + + +  ARL   + R+I
Sbjct: 237 VPIISAVGHETDTTLIDLVSDRRAPTPTAAAEMAVPLRSEMVADMAHRNARLTGALTRII 296

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +     L+     LP+    L  +R RLD   + L+  L   + R     +     + S 
Sbjct: 297 QTARAQLDQAAARLPDLPGLLDSARMRLDDRGQRLDLALPSFVMRVRNRLDAPGMHLPSP 356

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L+  I ++R  +   +    +++    R         +    +L E+ +  +  +   +
Sbjct: 357 ELL--IGRSRARLQALRLPAPELLVSRARARLTAPTTHLPSPELLIERRRAGLRLVSGEL 414

Query: 421 KKLITRIEFILSHKIKSCH--------------TSVSITTRILQSFAYKNTLKRGYTSIQ 466
                R       + +                   +      L++ + +  L RGY  +Q
Sbjct: 415 DTAWQRSLQTFQLRTERQRLSPDILRSAIRLQQARLQGLGSHLEAVSPRAILSRGYVLVQ 474

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           D N   +T         R++++F DG   A + + +P  +
Sbjct: 475 DVNGQPVTSAEARPVADRVVLSFADGDRGARLDSLSPQGD 514


>gi|15803033|ref|NP_289063.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7
           EDL933]
 gi|12516901|gb|AAG57620.1|AE005480_7 exonuclease VII, large subunit [Escherichia coli O157:H7 str.
           EDL933]
          Length = 456

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     Y II+ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYXPRGDYXIIVESMQPAGEGLLQXKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  Q+K P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ 
Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P +I  AI   N       C   D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA
Sbjct: 182 PGQIVRAIELANQ------CNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + +   RL   +   +  +   
Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295

Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +   L      L  +R +   +RL + +   LE  + R  +    +  R+       
Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +  I + +  + +                                          
Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L  ++ +           L++ +  +TL RGY+    T+   + + + +     
Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           +     DG   + V N  P K+   K
Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454


>gi|241760867|ref|ZP_04758956.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374486|gb|EER63947.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 544

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 183/546 (33%), Positives = 297/546 (54%), Gaps = 38/546 (6%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                + +   +SVSE+S  LK  VE   SH+ VRGEISG+     SGH Y +LKD+ + 
Sbjct: 13  AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAV 71

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +D++IW+G +++I F PE G+E +  G++TT+ G S+YQ++IE L  +G G L+  L++R
Sbjct: 72  LDSVIWRGVVSRISFWPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           ++ L EEGLF+   K  +PF+PKII V++SP+GAVIRDIL R++ R P  VI++PV VQG
Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D+   ++A A+   + LK G   PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+
Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+  L + L NL  R+NN I R  K  
Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L+++ + LP+ ++ L+      D    +LE ++   +       N     ++   L 
Sbjct: 312 EERLDAVRQRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLK 371

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +      +    R +  E+++   +   L++  + R+ +     K L
Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425

Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
             +++                       +++ ++     ++    R+ +       L +G
Sbjct: 426 AEKLQPLLLEQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
           Y  ++D++++ ++   +  T  R+ + F DG                T       +   +
Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536

Query: 522 QGTQGE 527
              Q  
Sbjct: 537 PPEQTS 542


>gi|161870233|ref|YP_001599403.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis
           053442]
 gi|161595786|gb|ABX73446.1| exonuclease VII large subunit [Neisseria meningitidis 053442]
          Length = 469

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  MRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPPRPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   SIP++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACSIPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   +  L  I+ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGHLKTILEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      +K      ++ K+   
Sbjct: 320 QIRHPRQKLDDQRTYIHKLVQTLSYSMTQNLRAHTARFERQTQTLKHCRPDVSVYKH--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|157961140|ref|YP_001501174.1| exodeoxyribonuclease VII large subunit [Shewanella pealeana ATCC
           700345]
 gi|189037839|sp|A8H252|EX7L_SHEPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157846140|gb|ABV86639.1| exodeoxyribonuclease VII, large subunit [Shewanella pealeana ATCC
           700345]
          Length = 445

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 135/492 (27%), Positives = 220/492 (44%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN S+I   ++KG  
Sbjct: 8   VYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAMFKGRN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL  EGLF
Sbjct: 67  QAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLAAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
           +   K P+P   + I V+TSPTGA IRDIL  ++ R   + VII+P  VQG +  K I +
Sbjct: 127 ASDTKRPLPANIQKIGVVTSPTGAAIRDILHVLARRDSSIEVIIYPTPVQGSDAAKSICD 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N+  E       D++++ RGGGS+EDLW FNDE +   I NS IP++SA+GHE D
Sbjct: 187 AINLANSRAE------VDVLLVTRGGGSLEDLWSFNDEGLAHTIYNSGIPVVSAVGHEVD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY ADLRAPTP+  AE+     ++    L++  +RL          K + + ++  
Sbjct: 241 MTISDYVADLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQAWQHYQLKKQSQVQTIEH 300

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +  + L       D +   L+  ++  +        ++ +R+ +    H +    
Sbjct: 301 RLQKQDPQRRLQMYEQSFDEMQLRLQQAMQTKLHAYALKQQNLSSRLANQSPQHRLTLEA 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +      +   +                                   +K    R+   
Sbjct: 361 QRLSYLSAKLNDAM--------------------------------DDKLKMSEQRL--- 385

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                       +   + L + +   TL RGY+     +   +    +      +     
Sbjct: 386 ------------AHRAQQLDTVSPLATLSRGYSITLTGSGKVVQAPSDTCVGDTLTTRLR 433

Query: 491 DGQANAIVINKA 502
           DG   + V+  +
Sbjct: 434 DGSVTSTVVEVS 445


>gi|148556052|ref|YP_001263634.1| exodeoxyribonuclease VII large subunit [Sphingomonas wittichii RW1]
 gi|148501242|gb|ABQ69496.1| Exodeoxyribonuclease VII large subunit [Sphingomonas wittichii RW1]
          Length = 492

 Score =  362 bits (929), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 185/531 (34%), Positives = 263/531 (49%), Gaps = 61/531 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             ++   + P  SVSELS  LK  VE    HV VRGEISG++  HSSGH Y +LKD+ + 
Sbjct: 18  AEEQPGDNAPALSVSELSGALKRQVEEAFGHVRVRGEISGFK-RHSSGHCYLTLKDDRAA 76

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID +IWKG    + F PE+GIE +  G++TT+PG SKYQI+IE +  +G G L+  L++R
Sbjct: 77  IDGVIWKGQAAAMRFRPEDGIEVIATGRLTTYPGRSKYQIVIERMELAGQGALMALLDQR 136

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           ++ L  EGLF +  K P+PF+P+II V+TSPTGAVIRDIL R+  R P  V+++PV VQG
Sbjct: 137 RRMLAAEGLFDEDRKRPLPFMPRIIGVVTSPTGAVIRDILHRLEDRCPTHVVLWPVAVQG 196

Query: 184 DECPKEIANAILQLNTLKEGRTCPR----PDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +    ++A A+     +  G + PR    PD++I+ RGGGSIEDLW FN+E +VRAIA S
Sbjct: 197 EGAAAQVARAVRGFGAMAPGGSAPRPDLLPDLLIVGRGGGSIEDLWAFNEEEVVRAIAES 256

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD TLAD+AAD RAPTPT AAEMAVPV+  L   +  L AR   +  R 
Sbjct: 257 PIPVISAVGHETDTTLADFAADRRAPTPTAAAEMAVPVRADLAHHVRELGARAERLARRY 316

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++ +  P  D   +  + RLD +   L   L   I        H    ++ 
Sbjct: 317 RERAGERFEAVAERFPALDSLFAGQQQRLDDVADRLPRALGQRIAVARGDLAHAAGALRP 376

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   + + R  +                                              
Sbjct: 377 SLLDRKLDRARDRLEAV------------------------------------------- 393

Query: 420 IKKLITRI-EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                 R+ +  +  +I     ++    RI +       L+RGY  ++      +T+   
Sbjct: 394 ------RLTDRPIRARIADGEIALERLWRIAEQLHPDKPLQRGYVRVEKRGGGVLTEAAA 447

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                 + ++F DG  +A V N                +  E    Q  LF
Sbjct: 448 ARAAGLLTLHFADGAVDARVENGG------KAPPAKPRSDGEDAPRQQNLF 492


>gi|87119588|ref|ZP_01075485.1| Exonuclease VII, large subunit [Marinomonas sp. MED121]
 gi|86165064|gb|EAQ66332.1| Exonuclease VII, large subunit [Marinomonas sp. MED121]
          Length = 450

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 57/505 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN F+ +   +   +SVS+L+  ++ ++E++L  V V GEIS       SGH YFSLKD+
Sbjct: 1   MNFFTAEKQ-NEVAFSVSQLNRQIQSLLEASLPWVLVEGEISNL-ARPGSGHWYFSLKDS 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I   ++K   N + F P++G    +  K+T +      Q+ +ES+   G G L  A 
Sbjct: 59  KAQIRCAMFKNRNNSVGFKPKDGDLVKLRAKVTFYGPRGDCQLTVESMESGGEGALQQAY 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K +L  EGLF  +HK P+P  P+ +A+ITSP GA +RD++     RFPL  + I P 
Sbjct: 119 ERLKAQLEAEGLFKQEHKKPLPVTPERVAIITSPIGAAVRDMISAFKRRFPLTELTIIPS 178

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    + +   +++++           D II+ RGGGS+EDL+ FNDE + R I N+
Sbjct: 179 LVQGQGAAQNLTKQLIRMDASDH------FDAIIIGRGGGSLEDLYSFNDETLARTIFNA 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PIISA+GHE D+T+AD+ AD+RA TPT AAE+  P  + L   + + E  L     R 
Sbjct: 233 KTPIISAVGHEVDFTIADFVADVRAATPTAAAELLSPDSDQLIRQIQSRENSLTLSFERQ 292

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++ +   L+ L++ + +  + +   + +L +L + ++ +++ ++ +      H   R+ +
Sbjct: 293 LQTQQQKLDHLVQRMRHPSERIQLQQDKLTQLEKRMQQSMQALLNKHKVKLTHSDTRLSN 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++   Q + + Q+ + Q +K                                  
Sbjct: 353 ASPAQTLKLKNQQLEDYQRRLSQALK---------------------------------- 378

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++    + +     L   +    L RGY    +     I      
Sbjct: 379 -------------QNLEQKTQTFASLVEKLNLVSPLQILSRGYAIASNEEG-VIKNISQT 424

Query: 480 ATKTRILINFFDGQANAIVINKAPP 504
               ++ +   +G+ N  VI+K   
Sbjct: 425 KKGEKLKVRVENGELNCEVISKKKS 449


>gi|332141957|ref|YP_004427695.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551979|gb|AEA98697.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 454

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 58/502 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F+   S      +V++L+   +  +E  +  + +  EIS +    +SGH YF+LKDN ++
Sbjct: 6   FTNSPSTSRQILTVTKLNRLARTALEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A ++KG    +   P+EG + LV   +  +     YQ+++E +   G G L  A E  
Sbjct: 65  VRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLF   +K P+P     I VITS +GA + D+L  +  R P   VI++P  VQ
Sbjct: 125 KFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYPSMVQ 184

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+  P ++ NA+ + N   E       D+++L RGGGS+EDLW FNDE + R IA S++P
Sbjct: 185 GEAAPLQLINALRKANQRSE------VDVLLLTRGGGSLEDLWCFNDESLAREIAASTLP 238

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D+T++D+ AD+R+PTP+ AAE+       L  ++   + RL   +   I+ 
Sbjct: 239 IVSAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQA 298

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               L    + L   +    +      LDRL   L H ++  +    +  + +  R+   
Sbjct: 299 NKQQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + +                                                 +
Sbjct: 359 SPAARVARAK-----------------------------------------------DKL 371

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             +  ++   ++  +K+  + +  +  +LQS +  +TL RGY+     ++  +     + 
Sbjct: 372 SYVNAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLT-DSTTVNNVSKVN 430

Query: 481 TKTRILINFFDGQANAIVINKA 502
               I     DG+  + V N  
Sbjct: 431 VGDEIKTRVTDGEITSTVTNIQ 452


>gi|113969577|ref|YP_733370.1| exodeoxyribonuclease VII large subunit [Shewanella sp. MR-4]
 gi|123130600|sp|Q0HKV4|EX7L_SHESM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|113884261|gb|ABI38313.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. MR-4]
          Length = 448

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 142/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ I+E  L  V + GEIS +    SSGH Y +LKD++S+I   ++KG
Sbjct: 6   NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ++IES++P+G G L    E  K KL  +G
Sbjct: 65  RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K  +P   + I VITSP+GA IRD+L  ++ R P + VII+P +VQG+     I
Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPSGAAIRDVLHVLARRDPSIEVIIYPTQVQGESADLNI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     ++    L  + +RL          +   L+ L
Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQERRLSLL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      +TL     R D +   LE  L   +    R    + +R++     H +  
Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLASRLEQQSPKHKLAL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +      ++  ++                                           
Sbjct: 359 ETNRLSYLATRLQDAMQD------------------------------------------ 376

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 +      V      L++ +   TL RGY+   D N+  I     L+   +I   
Sbjct: 377 -----TLNQSEQRVKYAAHQLETVSPLATLSRGYSITTDANHQVIDNAAQLSVGDKINTR 431

Query: 489 FFDGQANAIVINKAPPK 505
              GQ  + V       
Sbjct: 432 LRHGQVQSTVTQITDES 448


>gi|237653876|ref|YP_002890190.1| exodeoxyribonuclease VII large subunit [Thauera sp. MZ1T]
 gi|237625123|gb|ACR01813.1| exodeoxyribonuclease VII, large subunit [Thauera sp. MZ1T]
          Length = 457

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/499 (27%), Positives = 215/499 (43%), Gaps = 54/499 (10%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +      SVSEL+   + ++ES L  + V GEIS      +SGH YF+LKD  +
Sbjct: 8   PANGAATPAAQVLSVSELNRMARELLESALPLMWVGGEISNLV-RAASGHVYFTLKDASA 66

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++   +W+     + F PE G+       +T +     YQ+ +E+L P+G G+L  A  +
Sbjct: 67  QVRCAMWRNRAQLLAFRPENGMRVEARALVTLYEARGDYQLSVEALRPAGIGSLFEAFNR 126

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K KL  EGLF +  +  +P  P+ + ++TSP  A +RD+L  +  R P L V+++P  V
Sbjct: 127 LKAKLAAEGLFDEAGRRALPRYPRALGIVTSPQAAALRDVLVTLRRRAPHLPVVLYPAPV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG + P  +  A+               D+++L RGGGSIEDLW FNDE + R +    +
Sbjct: 187 QGADAPARLLEAVRCAGRR---AAEDGVDVLLLVRGGGSIEDLWAFNDEALARTLRACPL 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++  +GHETD+T+AD+AADLRAPTP+GAAE+A       ++ L  LE RL   + R   
Sbjct: 244 PVVCGVGHETDFTIADFAADLRAPTPSGAAELASAGWYAARAELAVLEPRLRRAVERRFG 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                L+     L +  + L   R  L RL   L H     +            R+++  
Sbjct: 304 ELAQRLDRAALRLVHPRERLRRERDTLARLGERLHHATARRLEAADLRATRAGLRLRAAA 363

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                   R                                          +  L   + 
Sbjct: 364 PRPQALAAR------------------------------------------VDMLGGRLA 381

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +  TR+       +++    +      LQ  A +  L RGY   +D     +     +  
Sbjct: 382 RAATRL-------LEARSQRLDALAAHLQHLAPQAVLARGYAIARDKQGRVLRSTAGIPE 434

Query: 482 KTRILINFFDGQANAIVIN 500
              + +   DG+ +  VI 
Sbjct: 435 GAAVSVQLADGRLDTRVIG 453


>gi|304410030|ref|ZP_07391649.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS183]
 gi|307302257|ref|ZP_07582015.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica BA175]
 gi|304351439|gb|EFM15838.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS183]
 gi|306914295|gb|EFN44716.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica BA175]
          Length = 448

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   +
Sbjct: 3   GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 62  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+
Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     ++    L    +RL          +   L
Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 356 LTIEGSRLSYLASRLQDALQD--------------------------------------- 376

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  +     L     +
Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSADKLTIGDSL 428

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 429 QTRLRHGQVISTVTQIKP 446


>gi|251793136|ref|YP_003007864.1| exodeoxyribonuclease VII large subunit [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534531|gb|ACS97777.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 446

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 138/490 (28%), Positives = 227/490 (46%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YSVS+L+  ++ ++E+ L  V + GEIS +     SGH Y SLKD ++++   +++   
Sbjct: 7   IYSVSQLNQSVRLMLENQLGPVWLTGEISNF-SQPVSGHWYLSLKDENAQVRCAMFRMKN 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P  G++ LV   +T +     YQ+IIES+  +G G L+   E  K KL  EGLF
Sbjct: 66  MRVGFRPTNGMQVLVHANVTLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +   K  +P   K + +ITS TGA ++DIL  +  R P L+++I+P  VQG +   EIA 
Sbjct: 126 AQHLKKNLPHFSKAVGIITSKTGAALQDILHILQRRDPSLQIVIYPTAVQGKDAAVEIAQ 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N  +E       D++I+ RGGGS+EDLW FN+E++ RAI +S++P+ISA+GHE D
Sbjct: 186 MIELANRRQE------VDVLIVGRGGGSLEDLWCFNEEIVARAIFHSNLPVISAVGHEID 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRAPTP+ AAE+    +  L   L     R+   + RL   K   L     
Sbjct: 240 VTIADFVADLRAPTPSAAAELVSRNQTELLQQLQYRRQRIEIALDRLFVEKQQRLRHQSL 299

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    L   +  + +L   L+ +L     +   +   +  R+  + L   IQ++ 
Sbjct: 300 RLQNQHPQAQLHIQQQLITQLSHRLQQSLRHHWQKTSENLTALSMRLYKNPLPLRIQQHE 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + + +  +                                                  
Sbjct: 360 QQLSQLKVRL-----------------------------------------------NSQ 372

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++  +      ++     L S +    L RGY+  Q+  N  I   + +    +I     
Sbjct: 373 MNLNLGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQQNLTIRSIKEVNVGEQIRTRLA 432

Query: 491 DGQANAIVIN 500
           DG+  + +  
Sbjct: 433 DGKIVSQISQ 442


>gi|332140456|ref|YP_004426194.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550478|gb|AEA97196.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 454

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 58/502 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F+   S      +V++L+   + ++E  +  + +  EIS +    +SGH YF+LKDN ++
Sbjct: 6   FTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A ++KG    +   P+EG + LV   +  +     YQ+++E +   G G L  A E  
Sbjct: 65  VRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLF   +K P+P     I VITS +GA + D+L  +  R P   VI++P  VQ
Sbjct: 125 KFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYPSMVQ 184

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+  P ++ NA+ + N   E       D+++L RGGGS+EDLW FNDE + R IA S++P
Sbjct: 185 GEAAPLQLINALRKANQRSE------VDVLLLTRGGGSLEDLWCFNDESLAREIAASTLP 238

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D+T++D+ AD+R+PTP+ AAE+       L  ++   + RL   +   I+ 
Sbjct: 239 IVSAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQA 298

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               L    + L   +    +      LDRL   L H ++  +    +  + +  R+   
Sbjct: 299 NKQQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + +                                                 +
Sbjct: 359 SPAARVARAKDK-----------------------------------------------L 371

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                ++   ++  +K+  + +  +  +LQS +  +TL RGY+     ++  +     + 
Sbjct: 372 SYANAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLT-DSTTVNNVSKVN 430

Query: 481 TKTRILINFFDGQANAIVINKA 502
               I     DG+  + V N  
Sbjct: 431 VGDEIKTRVTDGEITSTVTNIQ 452


>gi|218778694|ref|YP_002430012.1| exodeoxyribonuclease VII, large subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760078|gb|ACL02544.1| exodeoxyribonuclease VII, large subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 453

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 154/509 (30%), Positives = 259/509 (50%), Gaps = 58/509 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MNP   +++     ++VS+L+  +K ++E  L  V V GEIS    I SSGH YF+LKD+
Sbjct: 1   MNPA--QHTQKRRIHTVSQLTAIIKSVLEEALPFVWVTGEISNL-HIPSSGHYYFTLKDD 57

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           H++I ++++KG    ++F  E+G+  + +G++  +     YQ+++E + P+G G L  A 
Sbjct: 58  HAQIRSVMFKGHARNLKFDLEDGMSVVCLGRVAVYEPQGAYQVLVEHMEPAGMGALALAF 117

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K KL EEGLF + HK  +P++P+ IAV+TSPTGAVI DIL+ +S RFP + V ++PV
Sbjct: 118 EQLKAKLSEEGLFDEDHKKSLPYLPRTIAVVTSPTGAVIHDILRVLSYRFPKVHVQVWPV 177

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG + P +I  ++  +N   +       D++I+ARGGGS+EDL  FN E + RAI  S
Sbjct: 178 KVQGADSPAQIVRSLEMINQQNQA------DVVIIARGGGSLEDLAPFNSEEVARAIFAS 231

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETD+T+ADY AD RAPTP+ AAE+ +P  + L+  L    ARL      +
Sbjct: 232 AIPVISAVGHETDYTIADYTADRRAPTPSAAAEIVLPEYQGLELLLKEYAARLKGAFTLM 291

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +K + + L +L K LP   + +   R R+D   + + +  +  +     + +  + ++ +
Sbjct: 292 LKKERDNLLNLKKRLPPPRRQVDDWRLRMDDYQQRIINLTKRGVVENRNNLSTALYKLNN 351

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              +H     +  +  K +     ++Q +R       +                      
Sbjct: 352 LSPLHKTPSLKVMLELKLRQFTGAMQQQMRADKAALSQ---------------------- 389

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRN 478
                                        L++      L+RGY+  + T     +    +
Sbjct: 390 -------------------------ARASLEALNPSAILERGYSITRKTPGMEIVRNVHD 424

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQ 507
           L+    + I    G+A A + +     + 
Sbjct: 425 LSPGDEVEITLASGKAAAQIKSIEKGTKS 453


>gi|126175187|ref|YP_001051336.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS155]
 gi|166232365|sp|A3D6V4|EX7L_SHEB5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|125998392|gb|ABN62467.1| Exodeoxyribonuclease VII large subunit [Shewanella baltica OS155]
          Length = 448

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   +
Sbjct: 3   GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 62  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+
Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     ++    L    +RL          +   L
Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALLNRLHILSRRQQLLASRLEQQSPKHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 356 LTIEGNRLSYLASRLQDALQD--------------------------------------- 376

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  +     L     +
Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSADKLTIGDSL 428

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 429 QTRLRHGQVISTVTQIKP 446


>gi|319637920|ref|ZP_07992686.1| exodeoxyribonuclease 7 large subunit [Neisseria mucosa C102]
 gi|317401075|gb|EFV81730.1| exodeoxyribonuclease 7 large subunit [Neisseria mucosa C102]
          Length = 449

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 140/507 (27%), Positives = 241/507 (47%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLTH-AASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG FS + K P+P  P+ I +ITS   A +RD++  ++ R P + +I++P 
Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPQCIGIITSLAAAALRDVVTTLNRRAPEIPIIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  L+ L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDDQRASISKLAQTLSYSMTQNLRAHTARFERQTQTLKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                +I K+         H +  +    R +   ++                       
Sbjct: 349 CHPDVSIYKHNID------HFQTALSHSFRQLLTHRR----------------------- 379

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                S++    +L++ + ++ L+RG++ +++T    I     L
Sbjct: 380 --------------------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADTL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F DG+ +  V  +    E
Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446


>gi|330504668|ref|YP_004381537.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina
           NK-01]
 gi|328918954|gb|AEB59785.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina
           NK-01]
          Length = 459

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/500 (28%), Positives = 228/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF++ N LD    SVS+L+   + ++E   + + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFARLN-LDREVLSVSQLNNRARLLLEDVFTGIWVEGEISNL-ARPASGHIYFTLKDSQ 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 62  AQVRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLILDAVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K  +P  PK I ++TSPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLGAEGLFATERKIALPAHPKRIGIVTSPTGAVIRDIISVFRRRAPQVELNLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +   +I  A+ + + L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 182 VQGRDATAQIVRALQRADAL-------GFDALILARGGGSLEDLWCFNEEAVARAVAGCI 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD ++AD+ AD+RAPTP+ AAE+  P    L   L NL+ RL   +   +
Sbjct: 235 TPIVSAVGHETDVSIADFVADVRAPTPSAAAELLAPDSSELVQRLHNLQRRLVLHMQGRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L    K L +  + L     RLD L   L       +  +      +  R+ + 
Sbjct: 295 ARERLRLEGTSKRLRHPGERLRQQAQRLDDLDMRLRRAFNQQLANQRERLARLDARLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + + ++  LR                               
Sbjct: 355 HPGRGLALLRQRLDGLAARLPRAMQAQLRSQ----------------------------- 385

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +      LQ  +   TL RGY+ + D     +       
Sbjct: 386 ------------------RQQLGAVAAQLQIVSPLATLGRGYSILLDERGQAVRSAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+ +  V +
Sbjct: 428 PGQRLKARLSEGELDVRVED 447


>gi|114771711|ref|ZP_01449115.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium
           HTCC2255]
 gi|114547783|gb|EAU50673.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium
           HTCC2255]
          Length = 452

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 185/495 (37%), Positives = 266/495 (53%), Gaps = 50/495 (10%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+          + PE+SVSELS  LK ++E   S+V +RGE+ G     +SGH YF LK
Sbjct: 1   MSDLIDSPVKGENAPEFSVSELSSVLKRMIEGEFSNVRIRGEV-GRVSRPASGHLYFDLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ S I ++ WKG  +K+   PEEG+E +  GKITTF G S+YQ+I+  +  +G G L+ 
Sbjct: 60  DDKSVIASVTWKGQASKLVTQPEEGLEVVATGKITTFAGQSRYQMIVSEMSVAGIGALMA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            LEKRKKKL  EGLF    K  IP++P+II V+TSP+GAVI+DIL R+S RFP +V+++P
Sbjct: 120 QLEKRKKKLEAEGLFDKSIKKEIPYLPEIIGVVTSPSGAVIQDILHRLSDRFPRKVLLWP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG+ C  ++A AI   N L  G   PRP++II+ARGGGSIEDLW FN+E +VRA A 
Sbjct: 180 VAVQGERCAPDVAAAINGFNRLTPGGAMPRPELIIVARGGGSIEDLWGFNEESVVRAAAE 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+  L   L +++ R    +  
Sbjct: 240 SEIPLISAVGHETDTTLIDFASDLRAPTPTAAAEYAVPVRADLMGWLSSMDERRVRSLSA 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ K   L  L + LP  D+ ++ S  RLD +   L   L  +   K          ++
Sbjct: 300 GLEIKRQRLKDLSRGLPAPDELVAMSTQRLDSISERLPRALITVSNNKRTMLLQTSAGLR 359

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L + +    + I    + I+  +K  ++                             
Sbjct: 360 GSLLKNKLVDRSEAINRFVKSIQSNMKVIIQ----------------------------- 390

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                +++    R+ Q+  Y+ TL+RGY  I++     +T  + 
Sbjct: 391 ------------------RNQSALESLERLRQTLGYEATLQRGYAVIRNEKGGIVTSVKV 432

Query: 479 LATKTRILINFFDGQ 493
                 + I F DG+
Sbjct: 433 ADVSKSLEIEFQDGK 447


>gi|163749540|ref|ZP_02156787.1| exodeoxyribonuclease VII large subunit [Shewanella benthica KT99]
 gi|161330650|gb|EDQ01587.1| exodeoxyribonuclease VII large subunit [Shewanella benthica KT99]
          Length = 442

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 136/491 (27%), Positives = 230/491 (46%), Gaps = 57/491 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN ++I   ++KG
Sbjct: 6   NNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNQAQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ+II+S++P+G G L    E  K KL  EG
Sbjct: 65  RNRSVTFKPINGQQVLVKGSISVYEPRGDYQLIIQSMLPAGDGLLAQQYEALKIKLAAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K PIP   + I VITS TGA ++D+L  ++ R P + V+I+P +VQG+   ++I
Sbjct: 125 LFAADTKRPIPSNIQKIGVITSATGAALKDVLHVLARRDPSIEVVIYPTQVQGEPAVQQI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            NAI   N  +E       D+++L RGGGS+EDLW FN E +   I NS++P++SAIGHE
Sbjct: 185 CNAIAMANARQE------VDVLLLTRGGGSLEDLWCFNSEELAHEIYNSALPLVSAIGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D +++DY AD+RAPTP+  AE+     E+ +  L    +RL            + +++L
Sbjct: 239 IDTSISDYVADMRAPTPSAGAELLSKDTENKREKLELFISRLRQSWQHYQLKTNSRMSTL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L     ++ L       D +   L+  ++  +         + +R+     ++ +Q 
Sbjct: 299 THRLQRQDPNRRLQQYGQSFDEMQFRLDAAIDKKLTSLALKQQQLSHRLNQQSPVNKLQL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             Q +                                                     ++
Sbjct: 359 ESQRLSYLTSR-----------------------------------------------LK 371

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +  K+ S   S+S++   LQ+ +   TL RGY+  Q +N   +    +++    +   
Sbjct: 372 DSIKEKLASSEQSLSVSAHQLQTVSPLATLSRGYSITQYSNGKVLLNASDVSVGDMLTTR 431

Query: 489 FFDGQANAIVI 499
             +G+  + VI
Sbjct: 432 LLEGEVQSKVI 442


>gi|119468951|ref|ZP_01611976.1| exodeoxyribonuclease VII large subunit [Alteromonadales bacterium
           TW-7]
 gi|119447603|gb|EAW28870.1| exodeoxyribonuclease VII large subunit [Alteromonadales bacterium
           TW-7]
          Length = 443

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 149/487 (30%), Positives = 226/487 (46%), Gaps = 57/487 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E   + + + GEIS +    +SGH YFSLKD+ ++I A +W+G  
Sbjct: 9   VYTVSRLNREIRTVLEQGFASLVLTGEISNFIA-PASGHWYFSLKDDKAQIKAAMWRGNN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
               + PE G +  V  +++ +     YQ+I+E + P+G G L    +  K +L  EGLF
Sbjct: 68  RSQSYRPENGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S  +K P+P     I VITS TGA I+DIL  +  R P L VII+P  VQG E    + N
Sbjct: 128 SSAYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKEAHVHLIN 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N   E       DI+IL RGGGS+EDLW FN E + RAI NS +PIISA+GHE D
Sbjct: 188 QIELANARNE------VDILILGRGGGSLEDLWCFNHEQLARAIHNSDLPIISAVGHEID 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY AD+RAPTP+ AAE+  P  + L S +  L  RLNN     I  K      L  
Sbjct: 242 TTISDYVADMRAPTPSAAAELVSPNTQELHSKVTQLINRLNNAFKHSIADKRALATQLQH 301

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    L+    RLD L   L+  ++  ++++ R  N++  R+        + +  
Sbjct: 302 RLNLCHPRNQLNQKAQRLDELSIALQQAMQSRLYQQERTLNNLTPRLMRQSPDKKLAQAS 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + + Q  + Q ++Q L+                                         
Sbjct: 362 HQLSQLQARLNQAIQQQLQQANN------------------------------------- 384

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                     S+++    L S +  N L RGY+  +      +     +     ++    
Sbjct: 385 ----------SLALQASKLDSVSPLNVLARGYSITKTQQGKVVKSVGQIKAGDVLVTELV 434

Query: 491 DGQANAI 497
           DG   + 
Sbjct: 435 DGSVKST 441


>gi|153001513|ref|YP_001367194.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS185]
 gi|166232366|sp|A6WQP2|EX7L_SHEB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|151366131|gb|ABS09131.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS185]
          Length = 448

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   +
Sbjct: 3   GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 62  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+
Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     ++    L    +RL          +   L
Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 356 LAIEGNRLSYLASRLQDALQD--------------------------------------- 376

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  +     L     +
Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSTDKLTIGDSL 428

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 429 QTRLRHGQVISTVTQIKP 446


>gi|238752468|ref|ZP_04613944.1| Exodeoxyribonuclease 7 large subunit [Yersinia rohdei ATCC 43380]
 gi|238709317|gb|EEQ01559.1| Exodeoxyribonuclease 7 large subunit [Yersinia rohdei ATCC 43380]
          Length = 469

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 143/521 (27%), Positives = 229/521 (43%), Gaps = 57/521 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++  
Sbjct: 2   SQSSTSTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK  +P   K + VITS +GA + D+LQ +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQTHKQALPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELMRQIQGQQQRMEMAMDYYLAQRSQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R L  + +  I + YR    +  R+      
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLAESAQAQIRQLYRRTERLQQRLIQVQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYNQRVQQQEYRLHQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L  ++        I    L++ +   TL RGY+  Q      +   + +    
Sbjct: 374 ------ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPKGAVLKTTQQVHAGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524
           ++     DG   + +      K    K       ++ K   
Sbjct: 428 KLTTRLQDGWVESEITQIKVTKNAMAKNDAPKKPRQRKAAE 468


>gi|90407906|ref|ZP_01216081.1| exodeoxyribonuclease VII large subunit [Psychromonas sp. CNPT3]
 gi|90310997|gb|EAS39107.1| exodeoxyribonuclease VII large subunit [Psychromonas sp. CNPT3]
          Length = 443

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 145/495 (29%), Positives = 231/495 (46%), Gaps = 57/495 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           NS +   YSV+ L+   K ++E  L  + +  EIS    I  SGH YF+LKD+ +++   
Sbjct: 2   NSENKNIYSVTRLNRAAKSLLEDGLGVIWLSAEISNLT-IAVSGHWYFTLKDHSAQVKCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   +  F P+ G + LV GK++ +     YQ+IIES+   G G L    E  K +L
Sbjct: 61  MFKGNNRRTLFTPKHGQQVLVRGKLSLYETRGDYQLIIESMQAEGDGALKQQFEALKCQL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLFS +HK P+P I K + ++TS TGA + DIL  +  R P L VII+P  VQG   
Sbjct: 121 AGEGLFSAEHKKPLPQIIKRVGIVTSSTGAALFDILSVLKRRDPRLEVIIYPSLVQGKSS 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N   E       D++I+ RGGGS+EDL+ FND  +  AI +S +PIISA
Sbjct: 181 AASIVAQINLANARHE------CDLLIVGRGGGSLEDLYCFNDINVAYAIFHSQLPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T++D+ AD+RA TP+ AAE+    K  + + L  L  RL   I   +++  + 
Sbjct: 235 VGHEIDVTISDFVADIRAATPSAAAELVSQNKTFVSTQLSTLTTRLQRAIHSYMQHNSHL 294

Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L + L        L       D L   L H ++ ++ R  +    +   ++ +    
Sbjct: 295 HALLKEKLRQQDPQHKLQQKTLMTDELSLRLSHAMQQMLHRAVQKNASLNAHLQQNSPQK 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           NI+  +Q  ++    ++  +   L+   +  + K+A                        
Sbjct: 355 NIEIEKQKQIQLYTRLKNSLLNTLQQKQMYLQTKMA------------------------ 390

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L + +   TL RGY  ++D     +T   +L  +++
Sbjct: 391 -----------------------RLNAVSPLATLARGYAIVKDAQGKVVTDATSLKEESK 427

Query: 485 ILINFFDGQANAIVI 499
           + I+F  G+  A +I
Sbjct: 428 LNIHFAKGEVQARII 442


>gi|269214382|ref|ZP_06158546.1| exodeoxyribonuclease VII, large subunit [Neisseria lactamica ATCC
           23970]
 gi|269209962|gb|EEZ76417.1| exodeoxyribonuclease VII, large subunit [Neisseria lactamica ATCC
           23970]
          Length = 451

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 133/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IPI+S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPIVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L++
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLVR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L      + +L + L +++   +      F      ++      ++ +    
Sbjct: 302 QIRHPRQKLDEQHTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRPDISVYR---- 357

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 358 --------------------------------------QDIERFQTTLSHAFRQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LARHRQSLTAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|312884310|ref|ZP_07744019.1| exodeoxyribonuclease VII large subunit [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368083|gb|EFP95626.1| exodeoxyribonuclease VII large subunit [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 442

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 58/494 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   +
Sbjct: 4   SNNPNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G    + F P+ G + LV  +++ +     YQ+IIES+   G G L    E  K KL 
Sbjct: 63  FRGNNRHVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQAEGDGKLQQQFEALKLKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P  PK + +ITS TGA + DIL  +  R P L VII+P  VQGDE  
Sbjct: 123 AEGLFAQSSKQPLPEHPKRVGIITSKTGAALFDILDVLKRRDPSLPVIIYPTMVQGDEAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             IA AI   N+  E       D++I+ RGGGS+EDLW FN+EM+ R IA+S IPIISA+
Sbjct: 183 ISIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEMVARTIASSQIPIISAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+AD+ AD+RA TP+ AAE+      H   +L   + +L + +   +  + + +
Sbjct: 237 GHEIDVTIADFVADVRAATPSAAAELVSRDNSHKAQALSTKQNKLISAMRYYLSEQKHHI 296

Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N+        +    L     +LD L   L   ++ +I  + +    I +R++    I  
Sbjct: 297 NAFTHRVERQHPRYRLQQQSQQLDDLESRLMSAIQRLINHQRQQVEKIQHRMELHSPIKR 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   +  +L  +Q                                               
Sbjct: 357 MASQKAQLLGLEQ----------------------------------------------- 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++   +  K+ +    ++I+   L + +   TL+RGY+  +      +T   ++ T   I
Sbjct: 370 KLLDAMDRKLLNARHQLAISAEKLDTVSPLATLQRGYSITKTAQ-KIVTHTSDVKTGDTI 428

Query: 486 LINFFDGQANAIVI 499
           +    DG+  +IV 
Sbjct: 429 ITRLVDGEIQSIVK 442


>gi|197106405|ref|YP_002131782.1| exodeoxyribonuclease large subunit [Phenylobacterium zucineum HLK1]
 gi|196479825|gb|ACG79353.1| exodeoxyribonuclease large subunit [Phenylobacterium zucineum HLK1]
          Length = 487

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 165/528 (31%), Positives = 255/528 (48%), Gaps = 48/528 (9%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
              +     +   YSVSEL++ LK  +E     V +RGE+S     HS+GH Y +LKD+ 
Sbjct: 8   TDAAGPTDGNARPYSVSELAFALKRTLEDAYGFVRLRGELSKVTH-HSNGHVYLTLKDDK 66

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + ID ++WKG +  +   PE+G+E +V GKIT +P  S+YQI+IE++  +G G LL  LE
Sbjct: 67  AAIDGVVWKGQVRNLSIRPEQGMEVVVTGKITAYPQGSRYQIVIETMEAAGVGALLAQLE 126

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           + K +L  EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI  R+P  V+++PV V
Sbjct: 127 RLKARLAGEGLFAAERKKPLPTMPSVVGVITSPTGAVIRDILHRIRDRWPCHVVVWPVVV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD    ++  AI     L      PRPD++I+ARGGGS+EDLW FNDE + R +A  +I
Sbjct: 187 QGDAAAGQVCAAIRGFCALDPAGPVPRPDVLIVARGGGSVEDLWPFNDETLARTVAGCTI 246

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHETD TL D+ +D RAPTPT AAEMA PV   L++++ +  ARL+    R+++
Sbjct: 247 PLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLSELKAAVGDHGARLHRCAGRVVE 306

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   +    +AL      +  +  R   +   L   L        R    + +R+    
Sbjct: 307 DRRGRVQHADRALKRVPDLVELAAQRFGIVSGRLAAGLSRNAAAHERDLVRVASRLSPLL 366

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L       R+ +      ++                                        
Sbjct: 367 LQRPQAVQRERLEALSVRLKP--------------------------------------- 387

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                    +  +++     +    ++  S      L+RG+  +   + + +    +LA+
Sbjct: 388 --------CMDRRLERLSERLDALAKLYASVDPDRPLQRGFARVTRADGSIVHAGASLAS 439

Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
              + I F D      VI+ A                +     QG+LF
Sbjct: 440 GEEVAIKFGDAVTRQAVIDGADGAPPAPPTPAAAKKPKMTPPLQGDLF 487


>gi|109899426|ref|YP_662681.1| exodeoxyribonuclease VII, large subunit [Pseudoalteromonas
           atlantica T6c]
 gi|123360492|sp|Q15R61|EX7L_PSEA6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|109701707|gb|ABG41627.1| Exodeoxyribonuclease VII large subunit [Pseudoalteromonas atlantica
           T6c]
          Length = 444

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 234/498 (46%), Gaps = 58/498 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               +  +   ++VS+L++  + ++ES +  V +  EIS +    SSGH YF+LKDN ++
Sbjct: 1   MFSASPANRNIFTVSKLNHLARSVLESEIGQVWLSAEISNFVA-ASSGHWYFTLKDNRAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I + ++KG   K+   P+EG + LV   ++ +     YQ+I+E L P G G L    E  
Sbjct: 60  IKSAMFKGANRKVMTRPKEGDKVLVQANLSIYEPRGDYQLIVEHLEPEGEGQLKRQFEAL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K  L  +GLF++++K P+P     I V+TS TGA + DIL  +  R P + VII+P +VQ
Sbjct: 120 KLALSAQGLFANENKQPLPDSISRIGVVTSATGAALHDILTVLKRRNPAVEVIIYPTQVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    ++I  +I   N   E       DI+I+ RGGGS+EDLW FN+E +  AI  S +P
Sbjct: 180 GANASRQICRSIEIANQRNE------VDILIVGRGGGSLEDLWCFNEENVAWAIHYSVLP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D T+AD+ ADLRAPTP+ AAE+    +  + S+L     RL      L+K 
Sbjct: 234 IVSAVGHEVDITIADFVADLRAPTPSAAAELVSQSQIEMLSALTAKRDRLYKNTRTLLKE 293

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 SL + L   +    L     R+D     + HN+   + R  +  +  I+++   
Sbjct: 294 LHYQQQSLTQELNTYHPKNQLRQHMQRVDNQLTAITHNMTTRLMRAKQTCDSRISKLSQL 353

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +++ +       Q + Q  +                                   
Sbjct: 354 SPKALLKEQQNTHNLLSQRLTQAWR----------------------------------- 378

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                         ++  H  ++  + +L + +  +TL RGY+     N+  +  +++LA
Sbjct: 379 ------------RGVEQRHLKLANASHLLDTVSPLSTLARGYSITF-KNDKVVKSQKDLA 425

Query: 481 TKTRILINFFDGQANAIV 498
               I   F DG+  + V
Sbjct: 426 KGDVITNRFADGETKSTV 443


>gi|24374805|ref|NP_718848.1| exodeoxyribonuclease VII large subunit [Shewanella oneidensis MR-1]
 gi|31563133|sp|Q8EC50|EX7L_SHEON RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|24349486|gb|AAN56292.1|AE015767_1 exodeoxyribonuclease VII, large subunit [Shewanella oneidensis
           MR-1]
          Length = 445

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 141/491 (28%), Positives = 217/491 (44%), Gaps = 57/491 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   ++KG
Sbjct: 6   NNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFST-PSSGHWYLTLKDHFSQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + +V G I+ +     YQ++IES++P+G G L    E  K KL   G
Sbjct: 65  RNQSVSFKPVNGQQVIVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAALG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K  +P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+     I
Sbjct: 125 LFAADTKRALPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADINI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++PI+SA+GHE
Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     ++    L  + ARL          +   L+ L
Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLARLKQSASHYQLKQERRLSLL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      +TL     R D +   LE  L   +    R    + +R++     H +  
Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALTNKLHGLSRRQQQLASRLEQQSPKHKLAL 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +      ++                                               
Sbjct: 359 EANRLSYLATRLQ----------------------------------------------- 371

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +  K+      +      L++ +   TL RGY+   D N   IT    ++    I   
Sbjct: 372 DAMQDKLSHSGQRIKYVAHQLETVSPLATLSRGYSITTDVNGAVITSASQISLGDTITTQ 431

Query: 489 FFDGQANAIVI 499
             + +  + V 
Sbjct: 432 LSNERLMSTVT 442


>gi|119946572|ref|YP_944252.1| exodeoxyribonuclease VII, large subunit [Psychromonas ingrahamii
           37]
 gi|119865176|gb|ABM04653.1| Exodeoxyribonuclease VII large subunit [Psychromonas ingrahamii 37]
          Length = 447

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 151/497 (30%), Positives = 228/497 (45%), Gaps = 57/497 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S +   YSVS L+   K ++E+ L  + + GEIS    I  SGH YF+LKD+ +++   +
Sbjct: 4   SENKNIYSVSSLNRAAKALLETGLGVIWLSGEISNLT-IAVSGHWYFTLKDHSAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG   +  F P+ G + LV  K++ +     YQ+IIES+ P G G L    E  K KL 
Sbjct: 63  FKGNNRRSGFTPKHGQQVLVRAKLSLYEARGDYQLIIESMAPEGDGLLKQQFEALKFKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLFS+ HK P+P + K I +ITS TGA + DIL  +  R P L+VII+P  VQG    
Sbjct: 123 AEGLFSESHKKPLPQLIKCIGIITSSTGAALHDILSILKRRDPRLKVIIYPSLVQGASSA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             +A  I   N   E       D++I+ RGGGS+EDLW FN+ ++  AI +S +PIISA+
Sbjct: 183 ASVAAQIKLANARHE------CDLLIVGRGGGSLEDLWCFNEALVAYAIYDSQLPIISAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+AD+ AD+RA TP+ AAE+    K   Q+ L  L  R+   I+  ++ K +  
Sbjct: 237 GHEIDVTIADFVADVRAATPSAAAELVSQNKAFHQTQLDTLTNRMKQAILARLQLKSHQH 296

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             + + L   +    L     +LD L   L+H  +  + +  R    + + +        
Sbjct: 297 ALIREKLLNLHPKHKLQQQTLQLDELSLRLQHAFQATMNQAKRDLQRLQSGLFQHSPEGI 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I   +Q   + Q  +E  V+  L       + K                           
Sbjct: 357 ISVEQQKQKQLQHRLEHAVQVTLNQKTTLLQNK--------------------------- 389

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L + +   TL RGY  ++D N    T    L    +I
Sbjct: 390 --------------------SSRLNTVSPLATLARGYAIVKDKNGKITTDTAMLQPGDKI 429

Query: 486 LINFFDGQANAIVINKA 502
            +    G+  A V+   
Sbjct: 430 EVRLDKGEFEAQVLGGE 446


>gi|120598183|ref|YP_962757.1| exodeoxyribonuclease VII large subunit [Shewanella sp. W3-18-1]
 gi|120558276|gb|ABM24203.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. W3-18-1]
          Length = 466

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD++S+I   +
Sbjct: 21  GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHYSQIRCAM 79

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 80  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 139

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 140 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 199

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++PI+SA+
Sbjct: 200 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 253

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     E+    L  + +RL   +      +   L
Sbjct: 254 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 313

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 314 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 373

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 374 LAIEGTRLSYLASRLQDALQD--------------------------------------- 394

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  I     LA    +
Sbjct: 395 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKLAIGDDL 446

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 447 QTRLRYGQVISTVTQIKP 464


>gi|332532704|ref|ZP_08408580.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037920|gb|EGI74369.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 443

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 220/489 (44%), Gaps = 57/489 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ I+E   + + + GEIS +    +SGH YFSLKD+ ++I A +W+G  
Sbjct: 9   VYTVSRLNREIRTILEQGFASLVLTGEISNFIT-PASGHWYFSLKDDKAQIKAAMWRGNN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
               + P  G +  V  +++ +     YQ+I+E + P+G G L    +  K +L  EGLF
Sbjct: 68  RNQSYRPANGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S  +K P+P     I VITS TGA I+DIL  +  R P L VII+P  VQG E    + N
Sbjct: 128 SSAYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKEAHLHLIN 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N   E       D++IL RGGGS+EDLW FN E + RAI  S +PI+SA+GHE D
Sbjct: 188 QIELANARDE------VDVLILGRGGGSLEDLWCFNHEQLARAIFESELPIVSAVGHEID 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY AD+RA TP+ AAE+  P  + L + +  L  RL+N     I  K      L  
Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNKVTQLVNRLSNAFKHGIADKRALATQLQH 301

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    LS    RLD L   L+  +   ++++ R  N++  R+        +    
Sbjct: 302 RLNLCHPRNQLSQKSQRLDELSIALQQAMRNRLYQQERTLNNLTPRLMRQSPDKKLTSAS 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + + Q  + Q ++  L+        +                                
Sbjct: 362 HQLSQLQARLNQAIQHQLQQANNSLALQ-------------------------------- 389

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L S +  N L RGY+  +      +     + T   ++    
Sbjct: 390 ---------------ASRLDSVSPLNVLARGYSITKIQQGKVVKSVGQIKTGDVLVTELV 434

Query: 491 DGQANAIVI 499
           DG   + +I
Sbjct: 435 DGSIESQII 443


>gi|326793641|ref|YP_004311461.1| exodeoxyribonuclease 7 large subunit [Marinomonas mediterranea
           MMB-1]
 gi|326544405|gb|ADZ89625.1| Exodeoxyribonuclease 7 large subunit [Marinomonas mediterranea
           MMB-1]
          Length = 453

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 142/491 (28%), Positives = 226/491 (46%), Gaps = 56/491 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              P +SVSEL+  ++ ++E++L  + V GEIS      +SGH YFSLKD+ ++I   ++
Sbjct: 9   TSEPTFSVSELNRQIQQLLEASLPWILVEGEISNL-ARPASGHWYFSLKDDKAQIRCAMF 67

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K   + + F P++G    +  K+T +      Q+ +ES+   G G L  A ++ K KL  
Sbjct: 68  KNRNSAVRFRPKDGDHVRLRAKVTFYGPKGDCQLTVESMESGGEGALQAAYDRLKAKLQL 127

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF   HK P+P  P+ IA+ITSP GA IRD++     RFPL  + I P  VQG     
Sbjct: 128 EGLFEQNHKKPLPKRPERIAIITSPAGAAIRDMIIAFRRRFPLTELTILPSLVQGQGSAA 187

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +   + +        +    D II+ RGGGS+EDLW FNDE++ R+I + + PI+SA+G
Sbjct: 188 NLTKQLER------ADSSGHFDAIIIGRGGGSLEDLWSFNDELLARSIFHCTTPIVSAVG 241

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ AD+RA TPT AAE+  P    L S L   E +L   I  + +     L+
Sbjct: 242 HETDFTIADFVADIRAATPTAAAELLSPEISTLLSGLKQSELKLTRRIESITQTAQQRLD 301

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            LLK + +  + L   + +L  L   L+  ++  +  K         ++ S   +  I K
Sbjct: 302 FLLKRIRHPKERLDIQQDKLHNLNHRLKEGIQKHLDSKQVRLEKDSIKLMSTSPMRTIVK 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            + +I + +  + + +K  +                                        
Sbjct: 362 EQAYIEQLEGRLNRALKSTMTSKATT---------------------------------- 387

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                         +     L   +  NTL RGY      +   I  K +++  + + I 
Sbjct: 388 -------------FTRLVEQLNLVSPLNTLARGYAIAT-QDKKVIRSKDDISVGSTLNIK 433

Query: 489 FFDGQANAIVI 499
             DG  +  V 
Sbjct: 434 VEDGSFDCQVT 444


>gi|261417746|ref|YP_003251428.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y412MC61]
 gi|319767442|ref|YP_004132943.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y412MC52]
 gi|261374203|gb|ACX76946.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y412MC61]
 gi|317112308|gb|ADU94800.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y412MC52]
          Length = 448

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 235/498 (47%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V  L+ ++K    V+ +L  + V+GEIS ++  HS GH YF+LKD+  RI A+
Sbjct: 1   MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F PE+G+  L  G+I+ +  +  YQ+ ++ + P G G+L  A E+ K++L
Sbjct: 60  MFAGYNQYLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS  HK P+P  P+ I V+TSPTGA +RDI+  I  R+PL +VI+FP  VQGD  
Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI + N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVRAIERANAF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKI 304
           +GHETD+T+AD+ ADLRAPTPT AAEMA P    L   L   + RL   +        + 
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKERLAADKEQ 293

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                   A     +       +LD L   L    E ++ +  +  + +  R+       
Sbjct: 294 LRRLQGSYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAA 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++ ++        +E+ ++  +       +  +A                        
Sbjct: 354 ELERMKERQKATANALEKAMRTAVERHRFRFRSNLA------------------------ 389

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L++ +    ++RGY+ + +     + +   L     
Sbjct: 390 -----------------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEH 426

Query: 485 ILINFFDGQANAIVINKA 502
           + I   DG+ +  V    
Sbjct: 427 LSIQVQDGRVDCQVTGVE 444


>gi|88858307|ref|ZP_01132949.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas tunicata
           D2]
 gi|88819924|gb|EAR29737.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas tunicata
           D2]
          Length = 449

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 236/500 (47%), Gaps = 57/500 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N      YSVS L+  ++ ++E N + + + GEIS +    SSGH YF++KD+H++I A 
Sbjct: 4   NQKSPSVYSVSRLNKEIRQLLERNFASITITGEISNFVS-PSSGHWYFTVKDDHAQIRAA 62

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +W+G    + F P+ G +  +  +I+ +     YQ+I+E + P+G G L    E  K +L
Sbjct: 63  MWRGNNQAMRFKPKNGDQVQMQARISLYEPRGDYQLIVEQMEPAGEGALKLQFEALKMQL 122

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLFS  HK P+P I   + +ITS TGA ++DIL  +  R P L ++I+P +VQG+  
Sbjct: 123 ASEGLFSASHKKPLPSIINKVGIITSATGAAVKDILTVLQRRAPQLEIVIYPAQVQGNTA 182

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            +++   I   N+ KE       D+IIL RGGGS+EDLW FN+E + RAI  S IPI+SA
Sbjct: 183 HQQLIEKISLANSRKE------VDVIILGRGGGSLEDLWCFNNESLARAIFTSQIPIVSA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++DY AD+RA TP+ AAE+  P +  L S +   +  L N     +  +   
Sbjct: 237 VGHEIDFTISDYVADIRAATPSAAAELVSPNQAQLFSLITQQKQALFNAFKHYLAIQQRN 296

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             ++   L   +    L     RLD L   LE  ++  +    +  + + NR+       
Sbjct: 297 AVAIKHRLSLCHPQSQLQQKSQRLDELSINLEQAIKQKLLGAQKSCSSLNNRLMLRSPNL 356

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+++  + + +  +E                                        +L 
Sbjct: 357 KLQQSQHQLNKLKTKLET---------------------------------------QLQ 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            +++            ++++    L S +    L RGY+  ++     I     +   ++
Sbjct: 378 QQLKQA--------SNNLALQAARLNSVSPLTVLARGYSITKNEQGQIINSILQIKPDSK 429

Query: 485 ILINFFDGQANAIVINKAPP 504
           +     DG   A ++     
Sbjct: 430 MTTTLIDGDFTAQILEINSK 449


>gi|91792626|ref|YP_562277.1| exodeoxyribonuclease VII large subunit [Shewanella denitrificans
           OS217]
 gi|122968862|sp|Q12PS2|EX7L_SHEDO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|91714628|gb|ABE54554.1| Exodeoxyribonuclease VII large subunit [Shewanella denitrificans
           OS217]
          Length = 446

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 133/497 (26%), Positives = 222/497 (44%), Gaps = 57/497 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +  +  Y+VS L+  ++ I+E  +  + + GEIS +    SSGH Y +LKD HS+I   +
Sbjct: 3   AAKNNVYTVSRLNGEVRQILEGQIGKIWLNGEISNFSS-PSSGHWYLTLKDTHSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ+++ES++P+G G L    E  K KL 
Sbjct: 62  FKGRNQSVNFRPVNGQQVLVKGAISVYEPRGDYQLLLESMLPAGDGLLAQEYEALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EGLF+ + K  +P   + I +ITS TGA +RD+L  +  R   + V+++P +VQG    
Sbjct: 122 AEGLFASETKRALPSNIQRIGIITSATGAALRDVLHVLQRRDASIEVVVYPTQVQGTSAS 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D+++L RGGGS+EDLW FN+EM+  +I NS++P++SA+
Sbjct: 182 DNICRAIELANKRLE------VDVLLLTRGGGSLEDLWCFNNEMLAHSIYNSALPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+    K +    L  + +RL   +      +    
Sbjct: 236 GHEVDTTISDYVADVRAPTPSAGAELLSQDKGNKAQKLALMLSRLAQGMRHYQLSQDKHF 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +L   L      + L     + D     L++  +  + R       +  +++     H 
Sbjct: 296 VNLQHRLNQQDPKRRLQQLEQQFDEFQLRLDNAFKHRLSRLTLRHERLSAQLQRQSPEHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           ++   Q +       +  +K                                  +     
Sbjct: 356 LRLAHQALTHVSGRFDDAIK--------------------------------DTLGSAEQ 383

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R++  +                 L++ +   TL RGY+   + N   IT    +     +
Sbjct: 384 RLKQAVH---------------QLEAMSPLATLSRGYSISSNANGKVITDASKVKVGDSL 428

Query: 486 LINFFDGQANAIVINKA 502
                 GQ  + VI+  
Sbjct: 429 HTRLAKGQLVSTVIDVE 445


>gi|62128713|gb|AAX66416.1| exonuclease VII, large subunit [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 423

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 138/475 (29%), Positives = 215/475 (45%), Gaps = 57/475 (12%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  V + GEIS +    +SGH YF+LKD+ +++   +++ +  ++ F P+ G + LV   
Sbjct: 1   MGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRAN 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           IT +     YQII ES+ P+G G L    E+ K KL  EGLF  QHK P+P     + VI
Sbjct: 60  ITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQHKQPLPSPAHCVGVI 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS TGA + DIL  +  R P L VII+P  VQGD+ P +I  AI   N   E       D
Sbjct: 120 TSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGE------CD 173

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+GHETD T+AD+ ADLRAPTP+ A
Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAA 233

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-- 328
           AE+    ++ L   + + + RL   +   +  +      +   L      L  +R +   
Sbjct: 234 AEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTAL 293

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           +RL + +   LE  I +  +    +  R+        I + +  I + +           
Sbjct: 294 ERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQPRIHRAQSRIQQLEYR--------- 344

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                                                 +   +  ++             
Sbjct: 345 --------------------------------------LTENIRSRLSEQRERFGNAVTH 366

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           L++ +   TL RGYT    T+   + + + +     +     DG   + V +  P
Sbjct: 367 LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 421


>gi|325128447|gb|EGC51328.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           N1568]
          Length = 451

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISVYRQ--- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 359 ---------------------------------------DIDRFQTTLSHAFRQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LARHRQSLAAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|212710854|ref|ZP_03318982.1| hypothetical protein PROVALCAL_01922 [Providencia alcalifaciens DSM
           30120]
 gi|212686551|gb|EEB46079.1| hypothetical protein PROVALCAL_01922 [Providencia alcalifaciens DSM
           30120]
          Length = 455

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 137/506 (27%), Positives = 228/506 (45%), Gaps = 53/506 (10%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
               +   YSVS+L+  ++ ++++ +  + +  EIS +    SSGH Y +LKD+ +++ A
Sbjct: 2   STQQNSAIYSVSKLNQTVRELLDTQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV   +T +     YQ+IIES+ P+G G L    E  K+ 
Sbjct: 61  AMFRGQNTRVTFRPQNGQQVLVRATVTLYEPRGDYQLIIESMQPAGEGLLQQRFELLKQT 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  +GLF   HK  +P   K + +ITS TGA + DIL  +  R P L V+I+P  VQGD 
Sbjct: 121 LNAQGLFDVIHKQALPSPAKRVGIITSATGAALHDILNILHRRDPSLPVVIYPTAVQGDL 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +IA AI   N   E       D++I+ RGGGS+EDLW FN+E++ RAI NS +PIIS
Sbjct: 181 APAQIARAIELANLRHE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFNSRLPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+ADY AD+RAPTP+ AAE+    +  +   L + +  L   +   +  +  
Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQTEMLRQLKSGQQHLEMAMDYYLAAQQQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L   L      L  +R +                                      
Sbjct: 295 RFARLQHRLQQQHPQLRLARQQN------------------------------------Q 318

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I   RQ +        Q              +      + R+Q + +    H        
Sbjct: 319 ISALRQKLTNAINRQLQSSTFKFDKNQRRLMQNDLRPQLQRQQRQLQQTQYH-------- 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            ++ +L+H +       ++    +++ +   TL RG++  +      + +   +    ++
Sbjct: 371 -LQNMLTHLVTRYRQRFAVACSKMEAVSPLATLARGFSISETPEGTVLKKTSQVKLGQQL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
                DG   + V N    + + + K
Sbjct: 430 KTRLNDGWVESQVTNIQKVRTKKSTK 455


>gi|315127475|ref|YP_004069478.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas sp.
           SM9913]
 gi|315015989|gb|ADT69327.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas sp.
           SM9913]
          Length = 444

 Score =  359 bits (922), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 141/488 (28%), Positives = 223/488 (45%), Gaps = 57/488 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E   + + + GEIS +    +SGH YFSLKD+ ++I A +W+G  
Sbjct: 9   VYTVSRLNREIRALLEQGFASLVLTGEISNFIA-PASGHWYFSLKDDKAQIKAAMWRGNN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
               + P  G +  V  +++ +     YQ+I+E + P+G G L    +  K +L  EGLF
Sbjct: 68  RNQSYRPINGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S  +K P+P     I VITSPTGA I+DIL  +  R P L V+I+P  VQG E    +  
Sbjct: 128 SSAYKKPLPQNINRIGVITSPTGAAIKDILTVLKRRAPQLEVVIYPAMVQGKEAHGHLIK 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N   E       D+IIL RGGGS+EDLW FN E + RAI  SS+PI+SA+GHE D
Sbjct: 188 QIELANLRNE------VDVIILGRGGGSLEDLWCFNHEQLARAIYQSSLPIVSAVGHEID 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY AD+RA TP+ AAE+  P  + L + +  L  RL N     I  K      L  
Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNRVNQLINRLANAFKHDIADKRALAIQLQH 301

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    L+    RLD L   L+  +   ++++ R   ++  R+        +    
Sbjct: 302 RLNLCHPRNQLNQKSQRLDELSIALQQAMRQRLYQQERVLANLTPRLMRQSPDKKLANAN 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + +    + Q +                         + ++ + +  +          
Sbjct: 362 HQLAQLHARLNQAM-------------------------QQQLQHANNTL---------- 386

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                       ++    L S +  N L RGY+  +   N  +    ++     ++    
Sbjct: 387 ------------ALQASRLDSVSPLNVLARGYSITKAAQNKVVKSVEDVKVGDVLITELV 434

Query: 491 DGQANAIV 498
           DGQ  + V
Sbjct: 435 DGQVISKV 442


>gi|293391919|ref|ZP_06636253.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952453|gb|EFE02572.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 444

 Score =  359 bits (922), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 143/490 (29%), Positives = 229/490 (46%), Gaps = 53/490 (10%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+  ++ ++E+ L  V + GEIS +     SGH Y SLKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P  G++ LV   ++ +     YQ+IIES+  +G G L+   E  K KL  
Sbjct: 60  RMKNLRVGFRPTNGMQVLVRASVSLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  HK  +P   + + +ITS TGA ++DIL  +  R P L+VII+P  VQG +   
Sbjct: 120 EGLFAQNHKKNLPHFSQAVGIITSKTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I   N  +E       D++I+ RGGGS+EDLW FN+E++ RAI +S+IPIISA+G
Sbjct: 180 EIAQMIEIANRRQE------VDVLIVGRGGGSLEDLWCFNEEIVARAIFHSAIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    +  L   L   + R+   + R+   K   L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQTELLQQLQYRQQRIEIALDRIFIEKKRQLQ 293

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L   L N                       + +I +                L H+ QK
Sbjct: 294 HLFLRLQNQHPQAQLRIQ-------------QQLIAQLRHRLQQ--------SLCHHRQK 332

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +++      +                         +     ++      + +L  R+ 
Sbjct: 333 TAENLTALSARL------------------------YKNPLPLKLQQQKQLLAQLKVRLN 368

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             ++ K+      ++     L S +    L RGY+  Q+ +N  IT    +    +I   
Sbjct: 369 SEMNLKVGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQHNQAITSIHAVEIGEQIQTR 428

Query: 489 FFDGQANAIV 498
             DG   + +
Sbjct: 429 VADGIIISQI 438


>gi|218289632|ref|ZP_03493852.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240282|gb|EED07465.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 469

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 158/506 (31%), Positives = 241/506 (47%), Gaps = 59/506 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58
           MN  ++  +      +V+EL+  +K  +ES+  L    V GEIS ++    SGH YF+LK
Sbjct: 1   MNALTRAAAEAEAVLTVTELNRRIKERLESDPRLIQCRVVGEISNFKHHP-SGHMYFTLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  SRI A+++     +++F PE+G+  +  G +  F    +YQ+ +E L P G G L  
Sbjct: 60  DETSRIRAVMFSSRNRRLQFQPEDGMRVIAFGSVGVFERDGQYQLYVEDLEPDGLGALFV 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIF 177
             E+ + KL EEGLF+ + K P+P  P  + V+TSPTGAVIRDI   I  R+PL RVI+ 
Sbjct: 120 RFEQLRHKLAEEGLFAQERKRPLPRFPLRVGVVTSPTGAVIRDICTTIERRYPLARVILA 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P +VQG +    I  A+  L  L      PR D+II+ RGGGS+E+LW FN+EM+VRA+A
Sbjct: 180 PAQVQGPDAAPTIVRALEVLYAL-----EPRVDVIIVGRGGGSLEELWPFNEEMVVRAVA 234

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S +P++SA+GHETD TL D+AAD+RA TPT AAE+  P +  L++ L    AR     +
Sbjct: 235 RSPVPVVSAVGHETDVTLCDFAADVRAATPTAAAELVCPHQAELRAYLEQASARARKAAL 294

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + +    L  L     L +  + ++  R  +D +   +       I  + R    +  
Sbjct: 295 VKVAWGRERLLDLAGRPVLRDPTRIIAVRRQLVDYIETRVREAQRRPIGLRRRALADLER 354

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R++   L   IQ  R+ ++  +  +  +                                
Sbjct: 355 RLQRVQLGGAIQGRRRDLMRLEHQLRSLT------------------------------- 383

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FIT 474
                             ++      +      L++      L+RGY  I D +    IT
Sbjct: 384 ----------------ERQLLVQSRKLEGVIGKLEALNPLAVLRRGYGVILDEDGRSVIT 427

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
             ++LA   RI I   DG   A V  
Sbjct: 428 SAQSLAPGKRIGIRMHDGTVEAEVKG 453


>gi|146293743|ref|YP_001184167.1| exodeoxyribonuclease VII large subunit [Shewanella putrefaciens
           CN-32]
 gi|145565433|gb|ABP76368.1| Exodeoxyribonuclease VII large subunit [Shewanella putrefaciens
           CN-32]
          Length = 466

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD++S+I   +
Sbjct: 21  GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHYSQIRCAM 79

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++PSG G L    +  K KL 
Sbjct: 80  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPSGDGLLAQQFDALKMKLA 139

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 140 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 199

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++PI+SA+
Sbjct: 200 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 253

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     E+    L  + +RL   +      +   L
Sbjct: 254 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 313

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 314 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 373

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 374 LAIEGNRLSYLASRLQDALQD--------------------------------------- 394

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  I     +A    +
Sbjct: 395 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKVAIGDDL 446

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 447 QTRLRYGQVISTVTQIKP 464


>gi|217972558|ref|YP_002357309.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS223]
 gi|254783708|sp|B8E9T2|EX7L_SHEB2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|217497693|gb|ACK45886.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS223]
          Length = 448

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 142/498 (28%), Positives = 218/498 (43%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   +
Sbjct: 3   GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 62  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K  +P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 122 AEGLFAADTKRRLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+
Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     ++    L    +RL          +   L
Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++                                            
Sbjct: 356 LAIEGNRLSYLASRLQDA------------------------------------------ 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L  K+      +      L++ +   TL RGY+   D +N  +     L     +
Sbjct: 374 -----LQDKLSQSEQRIKYVAHQLETVSPLATLSRGYSITTDIHNQVVDSTDKLTIGDSL 428

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 429 QTRLRHGQVISTVTQIKP 446


>gi|254480273|ref|ZP_05093521.1| exodeoxyribonuclease VII, large subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214039835|gb|EEB80494.1| exodeoxyribonuclease VII, large subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 438

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 149/486 (30%), Positives = 239/486 (49%), Gaps = 50/486 (10%)

Query: 21  SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80
           +   + ++ES+   V V GE+S +    SSGH YFSLKD ++++   ++KG   ++ F P
Sbjct: 2   NRQARSLLESHFDFVWVEGEVSNFVV-PSSGHWYFSLKDGNAQVRCAMFKGRNQRLRFTP 60

Query: 81  EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140
             G    +  +++ + G  ++Q+++E +  +G+G L  A E+ K KLL EGLF  + K P
Sbjct: 61  GNGDHIRMRCRVSLYEGRGEFQLLVEHMEQAGAGALQAAFEQLKAKLLAEGLFQPERKKP 120

Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNT 199
           +P     + VITSPTGA I DIL  +  R P + V I PV VQG+    EIA AI + N 
Sbjct: 121 LPESVSHLGVITSPTGAAIHDILTVLKRRCPAIEVSILPVAVQGEGAAGEIAEAINRANR 180

Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259
            +E     + D +I+ RGGGS+EDLW FN+E++ RAIA+S++PI+SA+GHE D+++AD A
Sbjct: 181 WQEAGEI-QLDALIVGRGGGSLEDLWAFNEEIVARAIADSALPIVSAVGHEVDFSIADMA 239

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
           AD RA TP+ AAE+  P +      L  LEA L  +I R I      L+ L   L +   
Sbjct: 240 ADQRAATPSAAAELLSPDQREQMERLAKLEAELVRLIRRKIADAQTRLDHLRARLKHPGA 299

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            L     RLD L + L    + ++ RK      + +R+++   +  I + R+ +   QQ 
Sbjct: 300 QLREQSQRLDDLEQRLILAQKNLLSRKKSELALLESRLQAHSPLPRIVQMRKELGNLQQR 359

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +E  +                                 + ++   +R             
Sbjct: 360 MEAAM--------------------------------QSKLQDSKSR------------- 374

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             ++   ++L S +  +TL RGY  + DTN   +T    +   T++      G+    V 
Sbjct: 375 --LAHLAQMLDSLSPLSTLARGYAIVTDTNGKVLTDASEVEVGTQLETRLATGRLGVTVD 432

Query: 500 NKAPPK 505
                +
Sbjct: 433 RIEAEE 438


>gi|194098816|ref|YP_002001879.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           NCCP11945]
 gi|239999106|ref|ZP_04719030.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           35/02]
 gi|240013986|ref|ZP_04720899.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           DGI18]
 gi|240016428|ref|ZP_04722968.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           FA6140]
 gi|240080547|ref|ZP_04725090.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19]
 gi|240113083|ref|ZP_04727573.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae MS11]
 gi|240115839|ref|ZP_04729901.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           PID18]
 gi|240118137|ref|ZP_04732199.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae PID1]
 gi|240121553|ref|ZP_04734515.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           PID24-1]
 gi|240123686|ref|ZP_04736642.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           PID332]
 gi|240125876|ref|ZP_04738762.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|260440345|ref|ZP_05794161.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2]
 gi|291043639|ref|ZP_06569355.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2]
 gi|293398944|ref|ZP_06643109.1| exodeoxyribonuclease VII, large subunit [Neisseria gonorrhoeae F62]
 gi|193934106|gb|ACF29930.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           NCCP11945]
 gi|291012102|gb|EFE04091.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2]
 gi|291610358|gb|EFF39468.1| exodeoxyribonuclease VII, large subunit [Neisseria gonorrhoeae F62]
 gi|317164397|gb|ADV07938.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 469

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDL  FN+E +VRAI   +IP++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L+  + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I  L T +    +R+     
Sbjct: 377 ---------------------------------------DIVRLQTALPAAFSRL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|9931345|gb|AAG02155.1|AF212041_11 XseA [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 544

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 182/546 (33%), Positives = 295/546 (54%), Gaps = 38/546 (6%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                + +   +SVSE+S  LK  VE   SH+ VRGEISG+     S H Y +LKD+ + 
Sbjct: 13  AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSRHCYLALKDDKAV 71

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +D++IW+G +++I F PE G+E +  G++TT+ G S+YQ++IE L  +G G L+  L++R
Sbjct: 72  LDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           ++ L EEGLF+   K  +PF+PKII V++SP+GAVIRDIL R++ R P  VI++PV VQG
Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D+   ++A A+   + LK G   PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+
Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+  L + L NL  R+NN I R  K  
Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L ++ + LP+ ++ L+      D    +LE ++   +       N     ++   L 
Sbjct: 312 EERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLQ 371

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I + +  +   +      +    R +  E+++   +   L++  + R+ +     K L
Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425

Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
             +++                       +++ ++     ++    R+ +       L +G
Sbjct: 426 AEKLQPLLLEQRWQQKAELLAAYSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
           Y  ++D++++ ++   +  T  R+ + F DG                T       +   +
Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536

Query: 522 QGTQGE 527
              Q  
Sbjct: 537 PPEQTS 542


>gi|240128387|ref|ZP_04741048.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 469

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSEFQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDL  FN+E +VRAI   +IP++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L+  + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I  L T +    +R+     
Sbjct: 377 ---------------------------------------DIVRLQTALPAAFSRL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|119505206|ref|ZP_01627281.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2080]
 gi|119458897|gb|EAW39997.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2080]
          Length = 458

 Score =  359 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 50/492 (10%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVSEL+   K ++E + + V V GEIS +    SSGH YF+LKD+ S++   +++    K
Sbjct: 12  SVSELTQRAKSLLEGHFARVDVEGEISDFTA-ASSGHWYFTLKDSESQVRCAMFRSANAK 70

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    +  +++ +    ++Q+I + + P+G G L  A EK K KL EEGLF  
Sbjct: 71  LRFKPSRGDRVQIRARVSLYTNRGEFQLIAQHIQPAGDGALQQAFEKLKTKLFEEGLFGV 130

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
             K P+P   + I VITS +GA + DIL  +  R P+  + +FPV VQG + P  +  A+
Sbjct: 131 DRKQPVPNSARRIGVITSASGAALHDILAVLERRSPMTEIFLFPVPVQGTDAPGALVRAV 190

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            Q N L +  T P  D++I+ RGGGS EDLW FNDE + RAIANS +P +SA+GHE D++
Sbjct: 191 DQANALHQQHTLP-LDVLIIGRGGGSAEDLWAFNDETLARAIANSDLPTVSAVGHEVDFS 249

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ AD RA TP+ AAE+    +      L + +  L  +++R +K +   L      L
Sbjct: 250 ISDFVADQRAATPSAAAELVSLDQSEWSQRLDDAQRILQGLMVRRLKQERAVLGHWRARL 309

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +   TL   R  LD   ++L  +++  +  +     ++  +++S     +I+ +   + 
Sbjct: 310 RHPGTTLKQQRQLLDSRIQQLALSMQNRLKFQRSTLTNLAKQVESRHPGRSIEHHASLLA 369

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           ++++ ++Q+V+  +R                                             
Sbjct: 370 QRKRELQQLVQGSMRR----------------------------------------FRTT 389

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           +            +L+S   +NTL RGY  +   +   I   ++   K+ + I   +G+ 
Sbjct: 390 LAQHEQ-------LLRSLGPENTLARGYALVTGPDGQIIRNAKDAPAKSELRIRLAEGEL 442

Query: 495 NAIVINKAPPKE 506
            A VI+   PK+
Sbjct: 443 AAEVIDVDTPKD 454


>gi|254805156|ref|YP_003083377.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha14]
 gi|254668698|emb|CBA06451.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha14]
          Length = 469

 Score =  359 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTG+AE+  P ++     L  ++ RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGSAELVSPNRQESLHRLAQVQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      +K      ++ K+   
Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALKHCRPDVSVYKH--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|15602033|ref|NP_245105.1| exodeoxyribonuclease VII large subunit [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|14194719|sp|Q9CP86|EX7L_PASMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|12720387|gb|AAK02252.1| XseA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 445

 Score =  359 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 148/497 (29%), Positives = 244/497 (49%), Gaps = 57/497 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+  ++ ++E+ L  V + GEIS +     SGH Y +LKD ++++   ++
Sbjct: 1   MSEHIYSVSQLNQTVRVMLENQLRQVWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+IIES+ P+G G L    E  K +L  
Sbjct: 60  RMKNMRVSFRPQNGMQVLVHASVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMQLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+   K  +P   K + ++TS TGA ++DILQ +  R P L+V+I+P  VQG E   
Sbjct: 120 EGLFAQHLKKSLPPFCKSVGIVTSQTGAALQDILQILRRRDPSLQVVIYPTAVQGKEASA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D +I+ RGGGS+EDLW FN+EM+ RAI +S +PIISA+G
Sbjct: 180 EIVQMIELANRRQE------VDALIVGRGGGSLEDLWCFNEEMVARAIFHSQLPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L+    RL   + RL K K + L 
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQQALLQQLVYQRQRLEMALDRLFKQKDDRLQ 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +  + LS  +  + +L   L+ +++ ++ +K      +  R++ + L   +
Sbjct: 294 RLRLRLHNQHPQRQLSAQKQLMQQLAHRLDWSMQAVLQQKQAQLRVLWARVEKNPLPFTL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           QK +Q + + +  +                                              
Sbjct: 354 QKQKQDLAQLKVRL---------------------------------------------- 367

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            +  L  ++   H   +     L S +      RGY+  Q+     ITQ + ++   R++
Sbjct: 368 -DVALKRELTFKHHQFAALCTKLDSISPLKVFARGYSIAQNAQGVAITQLKQVSVGERVI 426

Query: 487 INFFDGQANAIVINKAP 503
               DG+  + V +  P
Sbjct: 427 TRLADGEIVSQVTDLRP 443


>gi|123441425|ref|YP_001005412.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|158512674|sp|A1JKT0|EX7L_YERE8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122088386|emb|CAL11177.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 458

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 147/511 (28%), Positives = 232/511 (45%), Gaps = 57/511 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K + VITS +GA + D+LQ +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L  L   L      L  +R +    +L R LE + +  I R  R    +  R+      
Sbjct: 295 QLTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRRLSRRTERLQQRLVQAQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L  ++        I    L++ +   TL RGY+  Q    + +   + + T  
Sbjct: 374 ------ALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           ++     DG   + +      K+   +K   
Sbjct: 428 KLTTRLQDGWVESEITQIKVAKKPRQRKAAN 458


>gi|254670543|emb|CBA06374.1| exodeoxyribonuclease large subunit [Neisseria meningitidis
           alpha153]
          Length = 469

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 133/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 320 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISVYRQ--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 377 ---------------------------------------DIDRFQTTLSHAFHQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|238763557|ref|ZP_04624518.1| Exodeoxyribonuclease 7 large subunit [Yersinia kristensenii ATCC
           33638]
 gi|238698189|gb|EEP90945.1| Exodeoxyribonuclease 7 large subunit [Yersinia kristensenii ATCC
           33638]
          Length = 458

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 140/508 (27%), Positives = 226/508 (44%), Gaps = 57/508 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             +     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++  
Sbjct: 2   SQTSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK  +P   K + VITS +GA + D+L  +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQSHKQSLPSPAKQVGVITSSSGAALHDVLHVLQRRDPSLPVIIYPTAVQGAD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIHLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELIRQIQGQQQRMEMAMDYYLAQRSQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R LE + +  I    R    +  R+      
Sbjct: 295 QFTHLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRSLGRRTERLQQRLIQVQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     ++        I    L++ +   TL RGY+  Q      +   + + T  
Sbjct: 374 ------AFERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGTLLKTTKQVHTGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
           ++     DG   + +      K+   +K
Sbjct: 428 KLTTRLQDGWVESEITQINVAKKPRQRK 455


>gi|261868140|ref|YP_003256062.1| exodeoxyribonuclease VII large subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413472|gb|ACX82843.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 444

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 142/490 (28%), Positives = 228/490 (46%), Gaps = 53/490 (10%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    YSVS+L+  ++ ++E+ L  V + GEIS +     SGH Y SLKD ++++   ++
Sbjct: 1   MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P  G++ LV   ++ +     YQ+IIES+  +G G L+   E  K KL  
Sbjct: 60  RMKNLRVGFRPSNGMQVLVRASVSLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  HK  +P   + + +ITS TGA ++DIL  +  R P L+VII+P  VQG +   
Sbjct: 120 EGLFAQNHKKNLPHFSQAVGIITSKTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I   N  +E       D++I+ RGGGS+EDLW FN+E++ RA+ +S IPIISA+G
Sbjct: 180 EIAQMIEIANRRQEA------DVLIVGRGGGSLEDLWCFNEEIVARAMFHSVIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    +  L   L   + R+   + R+   K   L 
Sbjct: 234 HETDITIADFVADLRAPTPSAAAELVSRDQTELLQQLQYRQQRIEIALDRIFIEKKRQLQ 293

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L   L N                       + +I +                L H+ QK
Sbjct: 294 HLFLRLQNQHPQAQLRIQ-------------QQLIAQLRHRLQQ--------SLCHHRQK 332

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +++      +                         +     ++      + +L  R+ 
Sbjct: 333 TAENLTALSARL------------------------YKNPLPLKLQQQKQLLAQLKVRLN 368

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             ++ K+      ++     L S +    L RGY+  Q+ +N  IT    +    +I   
Sbjct: 369 SEMNLKVGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQHNQAITSIHAVNIGEQIQTR 428

Query: 489 FFDGQANAIV 498
             DG   + +
Sbjct: 429 VADGIIISQI 438


>gi|148260334|ref|YP_001234461.1| exodeoxyribonuclease VII, large subunit [Acidiphilium cryptum JF-5]
 gi|326403524|ref|YP_004283606.1| exodeoxyribonuclease VII large subunit [Acidiphilium multivorum
           AIU301]
 gi|146402015|gb|ABQ30542.1| exodeoxyribonuclease VII, large subunit [Acidiphilium cryptum JF-5]
 gi|325050386|dbj|BAJ80724.1| exodeoxyribonuclease VII large subunit [Acidiphilium multivorum
           AIU301]
          Length = 462

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 173/509 (33%), Positives = 260/509 (51%), Gaps = 50/509 (9%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  +   + + PE +VSEL+  +K  VE+    V VRGEI+  +   +SGH Y +LKD 
Sbjct: 1   MSETTDTATGNLPELTVSELAGAVKRTVETAFGRVRVRGEITEMKTY-ASGHTYMALKDE 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I AIIW+G   ++   PE G+E +  G+ITT+P  S+YQ+IIE L  +G G LL  +
Sbjct: 60  GAKIRAIIWRGNAARLGLKPENGVEVIATGRITTYPERSEYQLIIERLDYAGEGALLARI 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EK + +L EEGLF    K  +P +P+I+ V++SP GAVI+DI   I+ RFP R+I++PV 
Sbjct: 120 EKLRLRLTEEGLFDAARKRALPLLPRIVGVVSSPQGAVIQDIRTTIARRFPRRIILWPVA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    +IA AI     L E    PRPD++I+ARGGGS+EDL  FNDE +VRA A+  
Sbjct: 180 VQGEAAAAQIAAAIRGFGALPEAGEVPRPDVLIVARGGGSLEDLMAFNDEEVVRAAASCP 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVP +  L + L    ARL   + R+ 
Sbjct: 240 IPLISAVGHETDTTLIDFASDRRAPTPTAAAELAVPDRMALAADLAQSGARLTGALTRVT 299

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +     L+    ALP+    +  +R RLD     L   L  ++  K      +  R+   
Sbjct: 300 QSVRLRLDRAAAALPDLPSMIGTARQRLDDRGERLALALPRLVAAKRAQAREVAARLV-- 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                                     H R I   ++  +A+L          +   +   
Sbjct: 358 --------------------------HPREIIAARRHSLALLGQRLAAPAPGLLREN--- 388

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +      L++ +Y  TL RG+  +   + + +T +R+  
Sbjct: 389 ------------------RLRLGALAARLEALSYHATLARGFVMVATPSGDPVTTRRDAG 430

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509
           +K  ++++F DG           P  Q +
Sbjct: 431 SKRHLVLHFGDGTLGVRPEADRAPPAQTS 459


>gi|110834713|ref|YP_693572.1| exodeoxyribonuclease VII large subunit [Alcanivorax borkumensis
           SK2]
 gi|122959393|sp|Q0VNE8|EX7L_ALCBS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110647824|emb|CAL17300.1| Exodeoxyribonuclease VII, large subunit [Alcanivorax borkumensis
           SK2]
          Length = 448

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 230/498 (46%), Gaps = 56/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S      S+S+L+   + ++ES+   + ++GE+S +    +SGH YFSLKD  ++I+  +
Sbjct: 4   SSRAEPLSISQLNLDAQGLLESSFPLIWLQGELSNF-SRPASGHWYFSLKDTRAQINGAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     + F P+ G + LV  KIT +     +QI++E + P+G G L    +  K +L 
Sbjct: 63  FRNRNRLLNFAPQNGEQVLVRAKITLYVPRGNFQIVVEHMEPAGQGALKAQFDALKAQLQ 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+ +HK  +P  P  I VITSP+GA IRDILQ +  R P + V+I+P  VQG E P
Sbjct: 123 SEGLFAQEHKRTLPAWPNQIGVITSPSGAAIRDILQVLQRRCPSIPVLIYPAAVQGAEAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            ++  A+       E       D++IL RGGGS+EDLW FNDE + RA+AN  IPI+SA+
Sbjct: 183 AQLRQALALAVARNE------CDVLILGRGGGSLEDLWAFNDEGLARAVANCPIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D  L D+AADLRAPTP+ AAE+  P    +   L  L  RL  ++ + ++     L
Sbjct: 237 GHEVDTGLTDFAADLRAPTPSAAAELVSPDLSIVSQRLAGLHRRLRWVMAQELRTVQERL 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L + L +  Q L  S  RLD L   L+  ++  +            R+        + 
Sbjct: 297 RHLSQRLRSPRQHLEQSSQRLDELQNRLQRQMQHRLTLLQGRLQPSQQRLARLSPQRLLV 356

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +Q +    + + Q + + L+   L+                                 
Sbjct: 357 ERQQRLATLSKRLPQPILRQLQQQQLQL-------------------------------- 384

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                          +  ++ L + +   TL RGY+      N  +     L     +  
Sbjct: 385 ---------------AGLSKRLHTASPLETLARGYSITF-KGNQAVRSVEQLQAGDTLTT 428

Query: 488 NFFDGQANAIVINKAPPK 505
              DG+  A V +     
Sbjct: 429 RLADGEIIARVEHVQVSD 446


>gi|241758502|ref|ZP_04756621.1| exodeoxyribonuclease VII, large subunit [Neisseria flavescens
           SK114]
 gi|241321337|gb|EER57485.1| exodeoxyribonuclease VII, large subunit [Neisseria flavescens
           SK114]
          Length = 449

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 139/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAMRLAQPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG FS + K P+P  PK I ++TS   A +RD++  ++ R P + VI++P 
Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPKCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                   + L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDASQKFDWLARQIRHPRQKLDEQRASISKLAQMLSYSMTQNLRTHTARFERQTQTLKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                ++ KN           +  +    R +   ++                       
Sbjct: 349 CRPDVSVYKNNID------RFQTALSHSFRQLLFHRR----------------------- 379

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                S++    +L++ + ++ L+RG++ +++T    I     L
Sbjct: 380 --------------------QSLTAQAALLEAISPQHILERGFSVVKNTRGQVIRNADML 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F DG+ +  V  +    E
Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446


>gi|225076653|ref|ZP_03719852.1| hypothetical protein NEIFLAOT_01704 [Neisseria flavescens
           NRL30031/H210]
 gi|224952019|gb|EEG33228.1| hypothetical protein NEIFLAOT_01704 [Neisseria flavescens
           NRL30031/H210]
          Length = 449

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 139/507 (27%), Positives = 240/507 (47%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNAIAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAMRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG F+ + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P 
Sbjct: 115 ERLKAQLQAEGAFASERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP +S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPFVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  L+ L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRASISKLAQILSYSMTQNLRAHTTRFERQTQTLKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                ++ KN         H +  +    R +   ++                       
Sbjct: 349 CRPDVSVYKNNIT------HFQTALSHSFRQLLAHRR----------------------- 379

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                S++    +L++ + ++ L+RG++ +++T    I     L
Sbjct: 380 --------------------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADTL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F DG+ +  V  +    E
Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446


>gi|52080963|ref|YP_079754.1| exodeoxyribonuclease VII large subunit [Bacillus licheniformis ATCC
           14580]
 gi|52786339|ref|YP_092168.1| exodeoxyribonuclease VII large subunit [Bacillus licheniformis ATCC
           14580]
 gi|319645079|ref|ZP_07999312.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. BT1B_CT2]
 gi|81825261|sp|Q65HI9|EX7L_BACLD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|52004174|gb|AAU24116.1| Exonuclease VII, large subunit [Bacillus licheniformis ATCC 14580]
 gi|52348841|gb|AAU41475.1| YqiB [Bacillus licheniformis ATCC 14580]
 gi|317392888|gb|EFV73682.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. BT1B_CT2]
          Length = 449

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 147/491 (29%), Positives = 244/491 (49%), Gaps = 60/491 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+ L+ ++K    V+ +L  + ++GE+S  + IHS GH YF+LKD+++RI ++++    
Sbjct: 8   TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHIYFTLKDDNARIQSVMFARQN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL +EGLF
Sbjct: 67  RNLAFTPENGMKVLVRGGISVYEPSGSYQLYAKEIQPDGIGALHLAYEELKKKLSQEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            +++K PIP  P ++ V+TSPTGA +RD++  I  R+P ++VI+ P  VQG    + I +
Sbjct: 127 DEKYKKPIPAFPSVVGVVTSPTGAAVRDVITTIKRRYPLVKVIVLPTLVQGVNAGESIVS 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I + N           D++I+ RGGGSIE+LW FN+E + RAI +S IPIISA+GHETD
Sbjct: 187 SIEEANRR------DLCDVLIVGRGGGSIEELWAFNEEAVARAIFSSDIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ ADLRA TPTGAAE+AVP    L   L  LEAR+   + + +K +   + +L  
Sbjct: 241 FTISDFVADLRAATPTGAAELAVPNMLDLLERLKTLEARMTKSMQQDLKKRQERVKNLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +      D +    +  L + + RK +  N    +++       +++ R
Sbjct: 301 SYAFRYPKRLYAQKEQEFDLIFDRFQKQLAMTVDRKKQKLNEQTYKLEMLHPEEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E+   +++ +K                                             
Sbjct: 361 KRHEEQTVRLKRNMKVQ------------------------------------------- 377

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +K  H+        L + +    ++RGY+      N  I     +  K  I +   
Sbjct: 378 ----LKQIHSQFQTVLGKLNALSPLQVMERGYSLTY-KENELIKSIEQVHEKDEIRVTLN 432

Query: 491 DGQANAIVINK 501
           DG     V+ K
Sbjct: 433 DGTLTCEVLQK 443


>gi|318606731|emb|CBY28229.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 458

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 145/511 (28%), Positives = 231/511 (45%), Gaps = 57/511 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQAVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L+ EGLF   HK P+P   K + VITS +GA + D+LQ +  R P L +II+P  VQG +
Sbjct: 121 LVAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPIIIYPTAVQGAD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R LE + +  I    R    +  R+      
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLSRRTERLQQRLVQAQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L  ++       SI    L++ +   TL RGY+  Q    + +   + + T  
Sbjct: 374 ------ALERQLNGYRQRFSIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           ++     DG   + +      K    +K   
Sbjct: 428 KLTTRLQDGWVESEITQIKVAKNPRQRKAAN 458


>gi|254672141|emb|CBA04917.1| exodeoxyribonuclease large subunit [Neisseria meningitidis
           alpha275]
          Length = 469

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      +K      ++ K+   
Sbjct: 320 QIRHPRQKLDEQRASISKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSVYKH--- 376

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I    T +     ++     
Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|149185202|ref|ZP_01863519.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. SD-21]
 gi|148831313|gb|EDL49747.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. SD-21]
          Length = 488

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 187/526 (35%), Positives = 265/526 (50%), Gaps = 53/526 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             ++   +    SVSE+S  LK  VE     V +RGE+SG +   +SGH Y +LKD  + 
Sbjct: 15  AKRRPGDNAEPLSVSEISNILKRTVEDRFGFVRLRGELSGVK-RAASGHLYAALKDEKAV 73

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           IDA++W+G   ++ F PE+G+E +  GK+TT+PG SKYQI++E +  +G G LL  LEK 
Sbjct: 74  IDAVMWRGNTQRLPFNPEDGLEVVASGKLTTYPGRSKYQIVVERMELAGEGALLALLEKT 133

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           + +L  EGLF +  K  +PF+PK I V+TSPTGAVIRDIL R++ RFP RV+++PV VQG
Sbjct: 134 RARLAAEGLFDEGRKRRLPFLPKTIGVVTSPTGAVIRDILHRLADRFPSRVVVWPVLVQG 193

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               +++A A+   + L EG    RPD++I+ARGGGSIEDLW FN+E +VRAIA  SIP 
Sbjct: 194 QGAAEQVAGAVRGFSHLPEGHP-DRPDLVIVARGGGSIEDLWSFNEEQVVRAIAECSIPT 252

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TLADYAAD RAPTPT AAE+AVPV+  L ++L + EAR    I+R ++  
Sbjct: 253 ISAVGHETDTTLADYAADRRAPTPTAAAEIAVPVRAELAATLADFEARTKRAILRPVQLG 312

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L +    LP++   L      LD L   L   L     +                  
Sbjct: 313 RERLEARADRLPSAQTLLQPQGQALDDLAEALRRGLMDRTGKAREALAR----------- 361

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                             +     L+ I  E K K+  L +        +    + +  L
Sbjct: 362 -----------------HRFSPGTLKGIVREGKNKLDGLRLPPSLLTRPLGEKRSQLDAL 404

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                             ++              L RGY  +  +    +T +   A + 
Sbjct: 405 ----------------ARLASQ------LHPDRPLSRGYVRVTTSGGRTLTDRAEAAKEA 442

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
            + + F DG   A+    A P   PT   +    K+     Q +LF
Sbjct: 443 ALTLKFRDGDL-AVSTGDAAPPSWPTPPKKRAAPKKRTPSAQDDLF 487


>gi|218768380|ref|YP_002342892.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis
           Z2491]
 gi|14194726|sp|Q9JTY8|EX7L_NEIMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|121052388|emb|CAM08720.1| exonuclease VII large subunit [Neisseria meningitidis Z2491]
 gi|319410626|emb|CBY90995.1| exodeoxyribonuclease VII large subunit (exonuclease VII large
           subunit) [Neisseria meningitidis WUE 2594]
 gi|325198507|gb|ADY93963.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           G2136]
          Length = 451

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|85709867|ref|ZP_01040932.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. NAP1]
 gi|85688577|gb|EAQ28581.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. NAP1]
          Length = 494

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 180/525 (34%), Positives = 272/525 (51%), Gaps = 50/525 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            +   +    S++E+S  LK  VE    +V +RGE+SG +   +SGH Y +LKD+ + +D
Sbjct: 18  SRAGDNAEPLSITEISQALKRTVEERFGYVRLRGELSGVK-RAASGHMYLALKDDKAVLD 76

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            ++W+G   ++ F+PE+GIE +  GK+TT+PG SKYQI+I+SL  +G G LL  LEK + 
Sbjct: 77  GVMWRGNAGRLAFVPEDGIEVIATGKLTTYPGRSKYQIVIDSLEIAGEGALLALLEKTRL 136

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185
           +L  EGLF+ + K  +PF+P+ I V+TSPTG+VIRDIL R++ RFP  VI++PV VQG  
Sbjct: 137 RLEAEGLFARERKRRLPFLPRTIGVVTSPTGSVIRDILHRLADRFPSHVIVWPVLVQGQG 196

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             +++A+AI   + L +     RPD++I+ARGGGSIEDLW FN+E++VRAIA  +IP+IS
Sbjct: 197 AAEQVADAIRGFSELSQDDAVRRPDVVIVARGGGSIEDLWSFNEEIVVRAIAECTIPVIS 256

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TLADYAAD RAPTPT AAEMAVPV+  LQ++L +  AR    + R ++    
Sbjct: 257 AVGHETDTTLADYAADRRAPTPTAAAEMAVPVRADLQATLADFAARQRRAVHRPVELGRE 316

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +  + +P  +  L     RLD L   L   L        +      +R+    L   
Sbjct: 317 RLEARTRRMPRIEVLLQPQAQRLDDLAERLRRGLTDRAAHGRQQLAGTASRLAPRLLEGA 376

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   R+ +   +                          +  +  +  I      +K    
Sbjct: 377 LSGRRERLDRTR--------------------------LSPQLVERPILTAQERLKA--- 407

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           ++     L     K  L+RGY  ++      +T     A +  +
Sbjct: 408 ----------------LARLASQLH---PKKPLERGYAIVRSETGEVVTSSAEAAKRAVL 448

Query: 486 LINFFDGQANAIVINK-APPKEQPTKKCQLHNNKREKQGTQGELF 529
           ++ F DG+ +  V +   PP  +P                Q +LF
Sbjct: 449 ILEFSDGKLDVGVGDTPPPPPARPAPAPAKKRRAPAPNPKQDDLF 493


>gi|56420930|ref|YP_148248.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus
           HTA426]
 gi|81832353|sp|Q75TC0|EX7L_GEOKA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|47076818|dbj|BAD18358.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus]
 gi|56380772|dbj|BAD76680.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus
           HTA426]
          Length = 448

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 236/498 (47%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V  L+ ++K    V+ +L  + V+GEIS ++  HS GH YF+LKD+  RI A+
Sbjct: 1   MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F PE+G+  L  G+I+ +  +  YQ+ ++ + P G G+L  A E+ K++L
Sbjct: 60  MFAGYNQHLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS  HK P+P  P+ I V+TSPTGA +RDI+  I  R+PL +VI+FP  VQGD  
Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI + N+          D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVRAIERANSF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKI 304
           +GHETD+T+AD+ ADLRAPTPT AAEMA P    L   L   + RL   +        + 
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKEQLAADKEQ 293

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                   A     +       +LD L   L    E ++ +  +  + +  R+       
Sbjct: 294 LRRLQGSYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAA 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++ ++        +E+ ++  +       +  +A                        
Sbjct: 354 ELERMKERQKAAANALEKAMRTAVERHRFRFRSNLA------------------------ 389

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L++ +    ++RGY+ + +     + +   L     
Sbjct: 390 -----------------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEH 426

Query: 485 ILINFFDGQANAIVINKA 502
           + I   DG+ +  V    
Sbjct: 427 LSIQVQDGRVDCQVTGVE 444


>gi|312962896|ref|ZP_07777383.1| Exodeoxyribonuclease 7 large subunit [Pseudomonas fluorescens WH6]
 gi|311282923|gb|EFQ61517.1| Exodeoxyribonuclease 7 large subunit [Pseudomonas fluorescens WH6]
          Length = 459

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 141/500 (28%), Positives = 234/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   +++ V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNL-ARPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P   HL   + NL  RL  ++   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L  + + L +  + L     RLD L   L    E  +  +      +  R+   
Sbjct: 295 SHSRLRLEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ L+   L+ +                        
Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAMREGLKARRLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 391 -----------------------SQVQTLQVVSPLATLGRGYSILLDERGQAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +GQ    V +
Sbjct: 428 TGQRLTARLGEGQLQVRVED 447


>gi|294637672|ref|ZP_06715951.1| exodeoxyribonuclease VII, large subunit [Edwardsiella tarda ATCC
           23685]
 gi|291089227|gb|EFE21788.1| exodeoxyribonuclease VII, large subunit [Edwardsiella tarda ATCC
           23685]
          Length = 461

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/503 (26%), Positives = 232/503 (46%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+ +++   +++ + 
Sbjct: 9   IFTVSRLNQTVRQLLELEMGQIWLSAEISNF-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    +  K++L  EGLF
Sbjct: 68  RRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDALKQRLQAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             +HK P+P   + + VITS +GA + D+L  +  R P L V+I+P  VQG E P ++  
Sbjct: 128 DIRHKQPLPQPARCVGVITSASGAALHDVLHVLRRRDPALPVVIYPSAVQGAEAPAQLVG 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI + N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD
Sbjct: 188 AIERANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++AD+ ADLRAPTP+ AAE+    ++ L   L++   RL   +   +  +   L  L  
Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLEMALDYALARQRQRLQQLHH 301

Query: 313 ALPNSDQTLSCSRYRLDR--LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R +     L R L   ++  + +  R + H   R+      H+++   
Sbjct: 302 RLAQQHPQLRLARQQAQLLVLRRRLAQAMDTRLRQAERRWRHGAERLAQHSPQHSLRNRA 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + + Q  +E  +++ +                                          
Sbjct: 362 YQLQQLQHRLESQLQRRMAEQREC------------------------------------ 385

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                       +     L+  +   TL RG++  Q  + + + ++   A    +     
Sbjct: 386 -----------FATLCARLEGVSPLATLARGFSVTQCADGHVLRRRAQAAVGDVLRTRLE 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513
           DG   + V    P   +  ++  
Sbjct: 435 DGWIESQVTGSVPLAPRRRRRKP 457


>gi|213971506|ref|ZP_03399617.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|213923698|gb|EEB57282.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv.
           tomato T1]
          Length = 462

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 7   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 64

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 65  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 124

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 125 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 184

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 185 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 238 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 297

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + +K     H+ +R+ + 
Sbjct: 298 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 358 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 393

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 394 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 430

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 431 PGQRLTARLGEGELQVRVED 450


>gi|308389480|gb|ADO31800.1| exonuclease VII large subunit [Neisseria meningitidis alpha710]
          Length = 469

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +++ K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AEERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 373

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 374 ------------------------------------CKNNIVRLQTALPAAFSQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ ++DT    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|294084705|ref|YP_003551463.1| Exonuclease VII large subunit [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664278|gb|ADE39379.1| Exonuclease VII large subunit [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 497

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 164/529 (31%), Positives = 249/529 (47%), Gaps = 54/529 (10%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           +     + P  ++ ELS  +K  VE    +V VR EIS       SGH YF+LKD+ S +
Sbjct: 19  AASAGDNAPYMTIGELSKRVKATVEGAFDYVRVRAEIS-RPTRAPSGHIYFTLKDDRSTL 77

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            A+ WK     ++  PEEG+E +  GK+TT+PG SKYQI++  +  +G G +L  LE+R+
Sbjct: 78  AAVCWKTVAGNLQVQPEEGLEVICSGKLTTYPGQSKYQIVVNQMEIAGEGAMLKMLEERR 137

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           + L  EGLF    K PIP +P  I VITSPTGAVIRDIL R++ RF + V+++   VQG 
Sbjct: 138 RMLAAEGLFDADRKRPIPEMPTTIGVITSPTGAVIRDILHRLNARFGVHVLVWGTLVQGK 197

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++A AI   + +      PRPDI+I+ARGGG++EDLW FN+E +VRA+A+ S+P+I
Sbjct: 198 NAAGQVAAAIRGFDAMPANGAIPRPDILIVARGGGALEDLWAFNEEEVVRAVADCSLPVI 257

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHETD TL D+ ADLRAPTPT AAE+AVPV   L + +   EARL   I + ++   
Sbjct: 258 SAIGHETDTTLIDFVADLRAPTPTAAAELAVPVHADLAAYISETEARLKRGISQRLETAN 317

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             +    + L +  + ++     LD     L   LE  +  +    + +  R++      
Sbjct: 318 QLVRMAARGLLDPAEMIARRGQMLDYALAGLNTALERALAARRLDLSGLAGRLRP--PET 375

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + +   H       +                                            
Sbjct: 376 RLAEMSGHFTRLSDRLANRFG--------------------------------------- 396

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     I+    +V+   ++L + +++  L RG+  + D     + +  +      
Sbjct: 397 --------QMIERHEQAVNSAGKLLDAHSFERVLDRGFALVIDAEGTPLKRAIDAPQGAE 448

Query: 485 ILINFFDGQANAIVINKAPP----KEQPTKKCQLHNNKREKQGTQGELF 529
           + + F D    A++          K     K         K   Q  LF
Sbjct: 449 VTLRFADASRQALLDPDGVDHVVHKPAKPAKKATAKPSATKDTKQDSLF 497


>gi|301386111|ref|ZP_07234529.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060189|ref|ZP_07251730.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tomato K40]
 gi|302135132|ref|ZP_07261122.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 463

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 66  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + +K     H+ +R+ + 
Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 PGQRLTARLGEGELQVRVED 451


>gi|261377500|ref|ZP_05982073.1| exodeoxyribonuclease VII, large subunit [Neisseria cinerea ATCC
           14685]
 gi|269146234|gb|EEZ72652.1| exodeoxyribonuclease VII, large subunit [Neisseria cinerea ATCC
           14685]
          Length = 451

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/490 (27%), Positives = 236/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P  VQG     +IA 
Sbjct: 128 SAERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++   + L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLNRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      +K      ++ KN   
Sbjct: 302 QIRHPRQKLDEQRASISKLAQMLSYSMTQNLRAHTARFERQTQTLKHCRPDVSVYKNNID 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                   +  +    R +   ++                                    
Sbjct: 362 ------RFQTALSHSFRQLLAHRR------------------------------------ 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                   S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 380 -------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVTKEQ 442


>gi|327481732|gb|AEA85042.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri DSM
           4166]
          Length = 458

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+ +LD    +VS+L+   + ++E   + V V GEIS      +SGH YF+LKD +
Sbjct: 4   DPF-QRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNL-ARPASGHVYFTLKDRN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    +I     +G+   V GK++ F G   YQ+I++ L P+G G L  A E
Sbjct: 62  AQVRCALFRQNAARIRQALRDGLAVRVRGKVSLFEGRGDYQLILDMLEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K  +P  P+ I +++SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAAEGLFSAERKAALPAHPRRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREATGQIVRALQLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+ A+GHETD ++AD+ AD+RAPTP+ AAE+  P    LQ  L  L+ RL   +   +
Sbjct: 235 TPIVCAVGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQQRLNGLQQRLVLRMRDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L+ L + L +  + L     R+D L + L   L+  +         +  R+ + 
Sbjct: 295 HRDAMRLDGLTRRLRHPGERLQQQAQRIDDLEQRLLRALDRRLCSGQERLARLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + + ++ +++                               
Sbjct: 355 HPGRTLNLLRQRLDHLSSRLPRAMQANIKGRRQ--------------------------- 387

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +    + L   +   TL RGY+ + D     I       
Sbjct: 388 --------------------QLQGLAQTLNVVSPLATLSRGYSILLDDRGQAIRSASQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     DG+ +  V +
Sbjct: 428 PGQRLKARLGDGELDVRVED 447


>gi|268594943|ref|ZP_06129110.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           35/02]
 gi|268596678|ref|ZP_06130845.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19]
 gi|268548332|gb|EEZ43750.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae
           35/02]
 gi|268550466|gb|EEZ45485.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19]
          Length = 455

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 13  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 71

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 72  ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 131

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 132 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 191

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDL  FN+E +VRAI   +IP++S +GHETD
Sbjct: 192 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 245

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L+  + RL  ++ +        L+ L +
Sbjct: 246 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 305

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 306 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 362

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I  L T +    +R+     
Sbjct: 363 ---------------------------------------DIVRLQTALPAAFSRL----- 378

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 379 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 436

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 437 ETDVRVSKEQ 446


>gi|53804093|ref|YP_114256.1| exodeoxyribonuclease VII, large subunit [Methylococcus capsulatus
           str. Bath]
 gi|53757854|gb|AAU92145.1| exodeoxyribonuclease VII, large subunit [Methylococcus capsulatus
           str. Bath]
          Length = 467

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/521 (26%), Positives = 220/521 (42%), Gaps = 58/521 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN  S  +      Y+VS L+   +  + S+   + V GE+S      +SGH YF+LKD 
Sbjct: 1   MNLRSSPDGRPEFVYTVSRLNREARITLSSHFGTLWVEGEVSNL-AAPASGHLYFTLKDA 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +   + F P  G   L   ++  +     YQ+I++ L  +G G L  A 
Sbjct: 60  EAQVRCAMFRSSGRLLGFKPTNGDHVLARAQVGLYEPRGDYQLIVDLLEEAGDGVLHRAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  KK+L  EGLF    K PIP  P  I V+TSPTGA IRDIL  ++ R+P   VIIFP 
Sbjct: 120 EALKKRLDAEGLFDPARKKPIPRFPTCIGVVTSPTGAAIRDILTVLARRYPAASVIIFPA 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG E P E+  A+ Q +           D+++LARGGGS+EDLW FNDE + RAI   
Sbjct: 180 KVQGSEAPAELIRALQQADASGW------CDVLLLARGGGSMEDLWAFNDESLGRAIVAC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P+++ IGHE D+T+AD+AADLRAPTP+ AAE   P +  L   L  LE++L    +  
Sbjct: 234 QTPVVTGIGHEVDFTIADFAADLRAPTPSAAAEAVTPDRIDLGVRLQRLESQLRRSFLGR 293

Query: 300 IKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++     L+ + + L   +  Q L     RL  L   L  N    +  + +    +  R+
Sbjct: 294 LETVQQRLDFVERRLRQCHPKQRLGRQAQRLAELKHRLARNAAARLNLERQRLQGLELRL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   +      +   +  + +     L       +                     
Sbjct: 354 VRHDPAQRVIHLTGKLDSLESRLRRSASLLLERRRERLQ--------------------- 392

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQK 476
                                        + L + +   TL RGY+  ++  ++  +   
Sbjct: 393 --------------------------ALGQRLDTVSPLATLARGYSIALRAADDAVVHSW 426

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
            ++     +     +G   + V    P              
Sbjct: 427 EDIQPGELLYTRLAEGSLISRVEKAEPGDPPVFPGQSPRGR 467


>gi|268686785|ref|ZP_06153647.1| exodeoxyribonuclease 7 large subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268627069|gb|EEZ59469.1| exodeoxyribonuclease 7 large subunit [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 451

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSEFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDL  FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L+  + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I  L T +    +R+     
Sbjct: 359 ---------------------------------------DIVRLQTALPAAFSRL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|304387318|ref|ZP_07369511.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis ATCC
           13091]
 gi|304338701|gb|EFM04818.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis ATCC
           13091]
          Length = 469

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++  L +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  ARLAKLLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 373

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 374 ------------------------------------CKNNIVRLQTALPAAFSQL----- 392

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|239827669|ref|YP_002950293.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. WCH70]
 gi|239807962|gb|ACS25027.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. WCH70]
          Length = 453

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 157/488 (32%), Positives = 246/488 (50%), Gaps = 59/488 (12%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V  L+ ++K   E   +L  + ++GEIS ++  HS GH YF+LKD  +RI A+++ G  
Sbjct: 8   TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE+G++ LV G+I+ +  S  YQI ++ + P G G L  A E+ KK+L  EGLF
Sbjct: 67  QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           S +HK PIP  P+ I V+TSPTGA IRDI+  I  R+P+  VI+FP  VQG++  + I  
Sbjct: 127 SPEHKKPIPAFPRYIGVVTSPTGAAIRDIMTTIRRRYPIATVILFPTLVQGEQAAESIVR 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I + N L         D++I+ RGGGSIE+LW FN+E++ RAI  S +PIISA+GHETD
Sbjct: 187 SIEKANELGY------IDVLIVGRGGGSIEELWAFNEEIVARAIFASEVPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    L   +   + RL   +   I  + + L  L K
Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHIAELMERISQRKLRLMRAMKEKIATESDRLLRLQK 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +      ++       +LD L   LE + E +  +K      +  ++        + + +
Sbjct: 301 SYAFRYPEKLYEQKEQQLDSLLERLERHTERLFDKKRERLEQLRLKLLRHHPNEQLSRMK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +      + +E+ ++ H+ +  L     ++ LH L                         
Sbjct: 361 EKHESLTKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                                 +    ++RGY+ + +     +   R L     I +   
Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433

Query: 491 DGQANAIV 498
           DGQ +  V
Sbjct: 434 DGQIDCHV 441


>gi|167855633|ref|ZP_02478392.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis 29755]
 gi|167853260|gb|EDS24515.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis 29755]
          Length = 449

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 139/504 (27%), Positives = 241/504 (47%), Gaps = 59/504 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MNP +    + +   ++S+L+Y +K ++E     V + GEIS +     SGH Y +LKD 
Sbjct: 1   MNPLN--FIMKNHILTISQLNYSVKQMLEVEFGSVWLIGEISNF-SQPVSGHWYLTLKDE 57

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++    ++ F P+ G++ LV   ++ +     YQ+IIE++ P+G G L    
Sbjct: 58  QAQVRCAMFRMKNMRVNFRPQNGMQVLVRANVSLYEPRGDYQVIIETMQPAGDGLLQQQF 117

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K KL   GLF+ +HK PIP   K + ++TS +GA ++DIL  +  R P L ++I+P 
Sbjct: 118 EQLKMKLAGLGLFAQEHKKPIPTFVKRVGIVTSSSGAALQDILHILQRRDPTLEIVIYPT 177

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E   +I   I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI +S
Sbjct: 178 LVQGKEATADIVQMIELANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAWAIYHS 231

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPIISA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   ++N    RL
Sbjct: 232 QIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQQELLRQLQHHADKVNLAFDRL 291

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
              K+   + L   L   +  + L     +L  L ++L+  +E ++ RK + + + + R+
Sbjct: 292 WSEKLARFDRLQLRLQAQHPQRQLQQRLQQLLHLEKQLKQQMEQLLLRKQQRWKNTLQRM 351

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           + + L + I    QH+ + +Q +   +++++                             
Sbjct: 352 ERNPLPYRISAQTQHLHKLEQRLSYAIEKNISQR-------------------------- 385

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                                          L   +    L RGY+  Q+     +   +
Sbjct: 386 ---------------------RQQFQTLCTQLDGLSPLAILARGYSVTQNQQGKALLSTQ 424

Query: 478 NLATKTRILINFFDGQANAIVINK 501
           +++    I+     G   + V+  
Sbjct: 425 DISIGETIVTRLAQGNVVSQVVGI 448


>gi|59801082|ref|YP_207794.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA
           1090]
 gi|254493884|ref|ZP_05107055.1| exonuclease VII large subunit [Neisseria gonorrhoeae 1291]
 gi|268599170|ref|ZP_06133337.1| exonuclease VII large subunit [Neisseria gonorrhoeae MS11]
 gi|268601516|ref|ZP_06135683.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID18]
 gi|268603853|ref|ZP_06138020.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID1]
 gi|268682319|ref|ZP_06149181.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID332]
 gi|268684476|ref|ZP_06151338.1| exonuclease VII large subunit [Neisseria gonorrhoeae SK-92-679]
 gi|81311207|sp|Q5F8V5|EX7L_NEIG1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|59717977|gb|AAW89382.1| putative exonuclease VII large subunit [Neisseria gonorrhoeae FA
           1090]
 gi|226512924|gb|EEH62269.1| exonuclease VII large subunit [Neisseria gonorrhoeae 1291]
 gi|268583301|gb|EEZ47977.1| exonuclease VII large subunit [Neisseria gonorrhoeae MS11]
 gi|268585647|gb|EEZ50323.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID18]
 gi|268587984|gb|EEZ52660.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID1]
 gi|268622603|gb|EEZ55003.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID332]
 gi|268624760|gb|EEZ57160.1| exonuclease VII large subunit [Neisseria gonorrhoeae SK-92-679]
          Length = 451

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDL  FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L+  + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++ +    
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I  L T +    +R+     
Sbjct: 359 ---------------------------------------DIVRLQTALPAAFSRL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|332162629|ref|YP_004299206.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325666859|gb|ADZ43503.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860293|emb|CBX70608.1| exodeoxyribonuclease 7 large subunit [Yersinia enterocolitica
           W22703]
          Length = 458

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 145/511 (28%), Positives = 231/511 (45%), Gaps = 57/511 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++  
Sbjct: 2   SQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L+ EGLF   HK P+P   K + VITS +GA + D+LQ +  R P L +II+P  VQG +
Sbjct: 121 LVAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPIIIYPTAVQGAD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R LE + +  I    R    +  R+      
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLSRRTERLQQRLVQAQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L  ++       SI    L++ +   TL RGY+  Q    + +   + + T  
Sbjct: 374 ------ALERQLNGYRQRFSIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514
           ++     DG   + +      K    +K   
Sbjct: 428 KLTTRLQDGWVESEITQIKVAKNPRQRKAAN 458


>gi|319427117|gb|ADV55191.1| exodeoxyribonuclease VII, large subunit [Shewanella putrefaciens
           200]
          Length = 448

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 145/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
              +  Y+VS L+  ++ I+E  L  + + GEIS +    +SGH Y +LKD++S+I   +
Sbjct: 3   GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PTSGHWYLTLKDHYSQIRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL 
Sbjct: 62  FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   
Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++PI+SA+
Sbjct: 182 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     E+    L  + +RL   +      +   L
Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 295

Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L   L      +TL     R D +   LE  L   +    R    + +R++     H 
Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +      +      ++  ++                                        
Sbjct: 356 LAIEGTRLSYLASRLQDALQD--------------------------------------- 376

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   K+      +      L++ +   TL RGY+   D +N  I     LA    +
Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKLAIGDDL 428

Query: 486 LINFFDGQANAIVINKAP 503
                 GQ  + V    P
Sbjct: 429 QTRLRYGQVISTVTQIKP 446


>gi|254448827|ref|ZP_05062283.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           HTCC5015]
 gi|198261517|gb|EDY85806.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           HTCC5015]
          Length = 452

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 149/501 (29%), Positives = 235/501 (46%), Gaps = 57/501 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               N      +SV+ L+  +K ++E++L  + V  E+S +    +SGH YF+LKD  ++
Sbjct: 1   MISANPNARDIFSVTRLNREVKALLETHLGLIWVEAELSNF-SRPASGHWYFTLKDERAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++G    +   P+ G   LV  +++ +     YQ+I+E + P+G G L    E  
Sbjct: 60  VRCAMFRGRNRLLRQAPQHGDRLLVRARLSLYEARGDYQLIVEHMEPAGQGGLQQQYEAL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLF+   K  +P  P+ I +ITS TGA +RDIL  +S R P +   ++PV VQ
Sbjct: 120 KAKLEGEGLFASDGKQNLPPFPRRIGLITSETGAALRDILSVLSRRCPMVPARVYPVPVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E    I NA+ +             D++I+ARGGGS+EDLW FN+E +VRAIA S IP
Sbjct: 180 GKESAPAIVNALERAQQR------NDCDVLIIARGGGSLEDLWPFNEETVVRAIAASRIP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           IIS +GHETD TL+D+AADLRAPTP+ AAE AVP +  L+ S+ +    + N + R +  
Sbjct: 234 IISGVGHETDITLSDFAADLRAPTPSAAAEQAVPDQRALRLSVQSQRQTIENHVRRCLHS 293

Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               LN + + L   +  ++L   + RLD L   L   +   I +      H   R+++ 
Sbjct: 294 WRTELNHVARRLEQQHPRKSLEQHQQRLDDLTPRLHRAIAQRIAQHRVQLKHHQQRLQNQ 353

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + RQ +   +Q + + +   L+    + +                        
Sbjct: 354 SPRRQLIEARQKLRRTEQQLHRNIADQLQRRRQQWR------------------------ 389

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                  +  R L++ +   TL RGY   Q  +   I     + 
Sbjct: 390 -----------------------LAARGLEAVSPLKTLDRGYAIAQRHSGQVIDDANGVT 426

Query: 481 TKTRILINFFDGQANAIVINK 501
              +I I    GQ +A V   
Sbjct: 427 AGEKIRIKLAKGQLDAEVETV 447


>gi|114562314|ref|YP_749827.1| exodeoxyribonuclease VII large subunit [Shewanella frigidimarina
           NCIMB 400]
 gi|122300413|sp|Q085S6|EX7L_SHEFN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|114333607|gb|ABI70989.1| Exodeoxyribonuclease VII large subunit [Shewanella frigidimarina
           NCIMB 400]
          Length = 450

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 58/500 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++  +  YSVS+L+  ++HI+E  +  + + GEIS +    SSGH Y +LKD HS++   
Sbjct: 6   SATKNNVYSVSQLNSEVRHILEGQIGKIWLNGEISNFSA-PSSGHWYLTLKDAHSQVRCA 64

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG    + F P  G + L+ G I+ +     YQ+++ES++P+G G L    E  K KL
Sbjct: 65  MFKGRNQSVRFKPVNGQQVLIKGAISVYEPRGDYQLLLESMLPAGDGLLAQEFEALKLKL 124

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+ + K PIP   + I VITS TGA +RDIL  ++ R P + V+++P +VQG   
Sbjct: 125 AAEGLFALETKRPIPTNIQRIGVITSATGAALRDILHVLARRDPSIEVVVYPTQVQGATA 184

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I  AI+  N   E       D+++L RGGGS+EDLW FN E +  AI NS++P++SA
Sbjct: 185 SQLICQAIVTANQRME------VDVLLLTRGGGSLEDLWCFNSEHLAHAIYNSALPVVSA 238

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T++DY AD+RAPTP+  AE+    K +    L  L +RL   +      +   
Sbjct: 239 VGHEIDTTISDYVADVRAPTPSAGAELLSKDKGNKAEKLALLLSRLQQGMKHYQLQQYGR 298

Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L        L     R D +   LE+ L+  + R       + NR++    ++
Sbjct: 299 LTQLSHQLQRHEPQHKLQQFEQRFDEIQMRLENALQHKLSRLTLRHQQLHNRLQQRSPVN 358

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   +Q +    +      K +                                     
Sbjct: 359 TLTLEKQRLGYLIERFNDASKDY------------------------------------- 381

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                      K   + VS     L + +   TL RGY+    TN + I     L+    
Sbjct: 382 ----------FKQAESRVSQAAHNLDTVSPLATLSRGYSIT-STNEHVIENANQLSNGDV 430

Query: 485 ILINFFDGQANAIVINKAPP 504
           I      G   + V + +  
Sbjct: 431 IHTRLKQGSVTSTVTDVSTK 450


>gi|330872868|gb|EGH07017.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 459

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKAALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  +     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHNRQVRLAHMESRLTAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLTARLGEGELQVRVED 447


>gi|260753163|ref|YP_003226056.1| exodeoxyribonuclease VII large subunit [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258552526|gb|ACV75472.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 524

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 183/535 (34%), Positives = 294/535 (54%), Gaps = 38/535 (7%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SVSE+S  LK  VE   SH+ VRGEISG+     SGH Y +LKD+ + +D++IW+G ++
Sbjct: 4   FSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAVLDSVIWRGVVS 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +I F PE G+E +  G++TT+ G S+YQ++IE L  +G G L+  L++R++ L EEGLF+
Sbjct: 63  RISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRRRRMLAEEGLFN 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
              K  +PF+PKII V++SP+GAVIRDIL R++ R P  VI++PV VQGD+   ++A A+
Sbjct: 123 ADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQGDQAAAKVAAAV 182

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              + LK G   PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+ISA+GHETD T
Sbjct: 183 RGFSALKAGDVIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPVISAVGHETDTT 242

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L DYAADLRAPTPT AAE+AVPV+  L + L NL  R+NN I R  K     L ++ + L
Sbjct: 243 LCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLSEERLEAVRQRL 302

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
           P+ ++ L+      D    +LE ++   +       N     ++   L   I + +  + 
Sbjct: 303 PDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLKARIAREQARLS 362

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE------ 428
             +      +    R +  E+++   +   L++  + R+ +     K L  +++      
Sbjct: 363 ACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFLAEKLQPLLLKQ 416

Query: 429 ----------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
                            +++ ++     ++    R+ +       L +GY  ++D++++ 
Sbjct: 417 RWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKGYARVEDSHSHV 476

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527
           ++   +  T  R+ + F DG                T       +   +   Q  
Sbjct: 477 VSNAHDAKTHKRLNLIFHDGSVWV---------APDTPPKSRKADNPPEPPEQTS 522


>gi|146283340|ref|YP_001173493.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri A1501]
 gi|158514182|sp|A4VNV0|EX7L_PSEU5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|145571545|gb|ABP80651.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri A1501]
          Length = 458

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+ +LD    +VS+L+   + ++E   + V V GEIS      +SGH YF+LKD +
Sbjct: 4   DPF-QRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNL-ARPASGHVYFTLKDRN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++ L P+G G L  A E
Sbjct: 62  AQVRCALFRQNAARVRQALRDGLAVRVRGKVSLFEGRGDYQLILDMLEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K  +P  P+ I +++SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAAEGLFSAERKAALPAHPRRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREATGQIVRALQLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+ A+GHETD ++AD+ AD+RAPTP+ AAE+  P    LQ  L  L+ RL   +   +
Sbjct: 235 TPIVCAVGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQQRLNGLQQRLVLRMRDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L+ L + L +  + L     R+D L + L   L+  +         +  R+ + 
Sbjct: 295 HRDAMRLDGLTRRLRHPGERLQQQAQRIDDLEQRLLRALDRRLCSGQERLARLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + + ++ +++                               
Sbjct: 355 HPGRTLNLLRQRLDHLSSRLPRAMQANIKGRRQ--------------------------- 387

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +    + L   +   TL RGY+ + D     I       
Sbjct: 388 --------------------QLQGLAQTLNVVSPLATLSRGYSILLDDRGQAIRSASQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     DG+ +  V +
Sbjct: 428 PGQRLKARLGDGELDVRVED 447


>gi|253989305|ref|YP_003040661.1| exodeoxyribonuclease VII large subunit [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780755|emb|CAQ83917.1| exodeoxyribonuclease 7 large subunit [Photorhabdus asymbiotica]
          Length = 457

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 137/502 (27%), Positives = 233/502 (46%), Gaps = 57/502 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   +SVS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD  +++ A +++
Sbjct: 6   NTGIFSVSRLNQTVRQLLEMEMGKIWLSAEISNF-SQPSSGHWYFTLKDERAQVRAAMFR 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++ F P+ G + LV   IT +     YQ+I+ES+ P+G G L    E  K+KL +E
Sbjct: 65  NNNQRMTFKPQNGQQVLVRAAITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLSDE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF   +K P+P   + + VITS +GA + DIL  +  R P L ++I+P  VQG E P +
Sbjct: 125 GLFDQNYKKPLPSPAQQLGVITSTSGAALHDILNILKRRDPSLPIVIYPTAVQGTEAPLQ 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  +I   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S+IPI+SA+GH
Sbjct: 185 IIRSIELANERRE------CDVLIVGRGGGSLEDLWSFNDEHVARAIFRSNIPIVSAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD T+AD+ ADLRAPTP+ AAE+    +  L   + + + RL   +      K    + 
Sbjct: 239 ETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQQQRLEMAMDYFFAQKQRVFSL 298

Query: 310 LLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L      L  +R +     L + L  +L+  + +    +  +  R+        I+
Sbjct: 299 LHHRLQQQHPHLRLARQQNLLVSLRQRLTDSLQRHLRQSDLAYEKLQQRLWHSEPGQQIR 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  Q I ++   ++Q                                             
Sbjct: 359 QYSQQIQQQDFRLKQ--------------------------------------------- 373

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +  ++       +++   +++ +   TL RGY+  +  +   + Q + +     I  
Sbjct: 374 --AIERQLSRSREKFAVSCSRMEAVSPLATLARGYSISEAPDGKLLKQTKQVHVGNAIRT 431

Query: 488 NFFDGQANAIVINKAPPKEQPT 509
           +  DG   + V      + +  
Sbjct: 432 HLQDGWVESEVTKVKKERRKRP 453


>gi|284008491|emb|CBA74991.1| exodeoxyribonuclease VII large subunit [Arsenophonus nasoniae]
          Length = 449

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 57/495 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   YSVS+L+  ++ ++E  L  V +  EIS +    +SGH YF+LKD  +++ A +++
Sbjct: 6   NSIIYSVSQLNQSVRQLLELQLGRVWLNAEISNF-SQPASGHWYFTLKDEKAQLRAAMFR 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G   ++ F P+ G + LV   +T +    +YQ+IIE++ P+G G L    E  K+KL  E
Sbjct: 65  GQNIRLNFRPQNGQQVLVRATVTLYEPRGEYQLIIENMQPAGDGLLQRQFEILKQKLSAE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+  +K  +P   K + VITS TGA + DIL  +  R P L VII+P  VQG++ P++
Sbjct: 125 GLFAQHYKQALPMPAKRLGVITSATGAALHDILNILKRRDPSLPVIIYPTAVQGEDAPRQ 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI   N  +E       D++I+ RGGGS+EDLW FNDE + RAI  S +PII+A+GH
Sbjct: 185 IVRAIEVANHRQE------CDVLIVGRGGGSLEDLWAFNDEKVARAIFASQLPIIAAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD T+AD+ ADLRAPTP+ AAE+    ++ L   L+  + RL   +   +  K+   + 
Sbjct: 239 ETDVTIADFVADLRAPTPSAAAELVSRNQQELLRQLLEQKQRLEMAMDYFLARKLRVFSQ 298

Query: 310 LLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L      L  +R +    +L ++L    +  + +  R    +  R+        +Q
Sbjct: 299 LHHKLQQQHPELRITRQQNYLIQLQQKLVSATQHYLQQINRQHYSLEQRLILCDPRPQLQ 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             RQ  ++ +  ++Q+                                            
Sbjct: 359 TCRQRYIQHEFQLKQL-------------------------------------------- 374

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              ++  +       +I    L++ +   TL RGYT  +  N   +T  + +    ++  
Sbjct: 375 ---INQTLSQYREKFAINCSRLEAVSPLATLARGYTISELPNGKVLTNTQQVDVGVKLKT 431

Query: 488 NFFDGQANAIVINKA 502
              DG   + +++  
Sbjct: 432 RLQDGWLESKILSIN 446


>gi|229592432|ref|YP_002874551.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens
           SBW25]
 gi|259646297|sp|C3K1K5|EX7L_PSEFS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|229364298|emb|CAY52033.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas
           fluorescens SBW25]
          Length = 459

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 235/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   +++ V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREILTVSQLNGRARVLLEDVFTNIWVEGEISNL-ARPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACI 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P   HL   + NL  RL  ++   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L  + + L +  + L     RLD L   L    E  +  +      +  R+   
Sbjct: 295 SHDRLRLEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ L+   L+ + ++                     
Sbjct: 355 HPGRQLALLRQRLESLAERLPRAMREGLKARRLQLQSQV--------------------- 393

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D     I       
Sbjct: 394 --------------------------QTLHVVSPLATLGRGYSILLDERGQAIRTAAQTH 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +GQ    V +
Sbjct: 428 TGQRLTARLGEGQLQVRVED 447


>gi|116748854|ref|YP_845541.1| exodeoxyribonuclease VII large subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697918|gb|ABK17106.1| Exodeoxyribonuclease VII large subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 494

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 144/513 (28%), Positives = 234/513 (45%), Gaps = 53/513 (10%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           D   Y+V  L+  +K ++ES    V V GEIS +R   +SGH YF+LKD +S+I A+ ++
Sbjct: 33  DSNIYTVGRLNAEIKAVLESGFPLVWVMGEISNFRV-PASGHFYFTLKDENSQIRAVFFR 91

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F PE G++ L   ++  +    +YQ+I+E + P G G L  A E+ KKKL  E
Sbjct: 92  PHNRHLRFHPESGMQVLCQARVGVYEPRGEYQLIVEVMEPQGIGALQLAFEQLKKKLAAE 151

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKE 189
           GLF    K P+P  P+ IA++TSPTGA +RD+L+      +PL V + P  VQG    +E
Sbjct: 152 GLFDPARKTPLPVCPQRIAIVTSPTGAAVRDMLKVFQRSPYPLSVTLLPALVQGQGAARE 211

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI   + L +       D++I+ RGGGSIEDLW FN+E++ RA+   S+P +SA+GH
Sbjct: 212 IAAAIAAADQLADRFGW---DLLIVGRGGGSIEDLWPFNEEVVARALWACSLPTVSAVGH 268

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T++D  AD R PTPT AAE  V   + +   L  ++ RL  + +R ++        
Sbjct: 269 EIDFTISDLVADARMPTPTAAAEWVVTRLDRIHRDLRQVDERLTRMAVRTVQTARMQFGY 328

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           +   LP+  + L   R  LD     L   L   I +    +  +  ++++      I   
Sbjct: 329 VRDRLPDPGRRLEDLRLYLDDRMERLMMGLARRIEQLRAVYGRLEEKLQAVHPARIIDGY 388

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R  + +  + +                    +L   R+  +NR+                
Sbjct: 389 RAALEQGTKEL--------------------LLAHKRQLAQNRL---------------- 412

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488
                       +  T   L++ +  + L RGY+          +    ++    R+L+ 
Sbjct: 413 -----------RLEATAARLENLSPLSVLSRGYSITYRLPMKKVVVHSDDVGAGDRVLVR 461

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
              G  +  V      +          + +R  
Sbjct: 462 LSRGSLDCTVNEARDDEMPGAGAVSRRDGQRNP 494


>gi|331019369|gb|EGH99425.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 463

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 66  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS   K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA     
Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARATEACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + +K     H+ +R+ + 
Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 PGQRLTARLGEGELQVRVED 451


>gi|261345938|ref|ZP_05973582.1| exodeoxyribonuclease VII, large subunit [Providencia rustigianii
           DSM 4541]
 gi|282566024|gb|EFB71559.1| exodeoxyribonuclease VII, large subunit [Providencia rustigianii
           DSM 4541]
          Length = 455

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 135/508 (26%), Positives = 229/508 (45%), Gaps = 57/508 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
               +   YSVS+L+  ++ ++++ +  + +  EIS +    SSGH Y +LKD+ +++ A
Sbjct: 2   STQQNSAIYSVSKLNQTVRELLDTQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV   +T +     YQ+IIES+ P+G G L    E  K+ 
Sbjct: 61  AMFRGQNTRVAFRPQNGQQVLVRATVTLYEPRGDYQLIIESMQPAGEGLLQQRFELLKQA 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  +GLF   HK  +P   K + VITS TGA + DIL  +  R P L VII+P  VQG+ 
Sbjct: 121 LNAQGLFDVIHKQALPSPAKCVGVITSATGAALHDILNILRRRDPSLPVIIYPTAVQGEL 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FN+E++ RAI NS +PIIS
Sbjct: 181 APAQITRAIELANLRNE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFNSRLPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+ADY AD+RAPTP+ AAE+    +  +   L + +  L   +   +  +  
Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQTEMLRQLKSSQQHLEMALDYYLAGQQQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +      +      +   +      F     R+  + L 
Sbjct: 295 RFARLQHRLQQQHPQLRLARQQNQLNGLQQKLNLAINRQLQSATWRFEKNKQRLVQNDLR 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +Q  ++ + + Q H++ +                                        
Sbjct: 355 PKLQHQQRQLQQTQYHLQNM---------------------------------------- 374

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L+  +       ++    +++ +   TL RG++  + +    + +   +    
Sbjct: 375 -------LTRLVTDYRQRFAVACSKMEAVSPLATLARGFSISETSQGAVLKKTSQVKLGQ 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
           ++     DG   + V +    K +   K
Sbjct: 428 QLKTRLNDGWVESQVTSIQKIKVKKVTK 455


>gi|325130400|gb|EGC53164.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           OX99.30304]
          Length = 451

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ ++DT    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|31563085|sp|Q886X9|EX7L_PSESM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 459

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS   K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + +K     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKVRKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLTARLGEGELQVRVED 447


>gi|313668507|ref|YP_004048791.1| exonuclease VII large subunit [Neisseria lactamica ST-640]
 gi|313005969|emb|CBN87426.1| exonuclease VII large subunit [Neisseria lactamica 020-06]
          Length = 451

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++  +++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCVMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNKVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMKQNLRAHTARFERQTQALQHCRPDISV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                   +  +    R +   ++                                    
Sbjct: 356 CKNNIDRFQTALSHAFRQLLARRR------------------------------------ 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                   S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 380 -------QSLAAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|325136479|gb|EGC59085.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M0579]
 gi|325201928|gb|ADY97382.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M01-240149]
 gi|325208321|gb|ADZ03773.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           NZ-05/33]
          Length = 451

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +++ K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AEERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ ++DT    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|28868653|ref|NP_791272.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851892|gb|AAO54967.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 463

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 66  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS   K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + +K     H+ +R+ + 
Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKVRKLQLQ------------------------ 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 PGQRLTARLGEGELQVRVED 451


>gi|312110280|ref|YP_003988596.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y4.1MC1]
 gi|311215381|gb|ADP73985.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y4.1MC1]
          Length = 451

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 59/488 (12%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V  L+ ++K   E   +L  + ++GEIS ++  HS GH YF+LKD  +RI A+++ G  
Sbjct: 8   TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE+G++ LV G+I+ +  S  YQI ++ + P G G L  A E+ KK+L  EGLF
Sbjct: 67  QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           S +HK PIP  P+ I V+TSPTGA IRDIL  I  R+P+  VI+FP  VQG+E    I  
Sbjct: 127 SAEHKKPIPAFPRYIGVVTSPTGAAIRDILTTIRRRYPIATVILFPTLVQGEEAAGSIVR 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I + N L         D++I+ RGGGSIE+LW FN+E + RAI  S +PIISA+GHETD
Sbjct: 187 SIEKANELGC------IDVLIVGRGGGSIEELWAFNEEAVARAIFASKVPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    L   +   + RL   +   I  +   L  L K
Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHVTELMERISQRKLRLMRAMKEKIAAESERLLRLQK 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +      ++       +LD L   L+ + E +  +K      +  ++        + + +
Sbjct: 301 SYAFRYPEKLYEQKEQQLDALLERLQRHTERLFDKKREQLEQLRLKLLRHHPAEQLSRMK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +      + +E+ ++ H+ +  L     ++ LH L                         
Sbjct: 361 EKHESLVKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                                 +    ++RGY+ + +     +   R L     I +   
Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433

Query: 491 DGQANAIV 498
           DGQ +  V
Sbjct: 434 DGQVDCHV 441


>gi|115376391|ref|ZP_01463628.1| exodeoxyribonuclease VII, large subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822668|ref|YP_003955026.1| exodeoxyribonuclease 7 large subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366598|gb|EAU65596.1| exodeoxyribonuclease VII, large subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395740|gb|ADO73199.1| Exodeoxyribonuclease 7 large subunit [Stigmatella aurantiaca
           DW4/3-1]
          Length = 575

 Score =  357 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 146/507 (28%), Positives = 236/507 (46%), Gaps = 23/507 (4%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV EL+  LK  +ES    V VRGE+SG+RG ++ GH YFSLKD  + IDA +W    
Sbjct: 77  VLSVGELTRQLKETIESRYPRVIVRGEVSGFRGANARGHLYFSLKDVDASIDAKLWASQA 136

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F   +G+E +  G +  +    +Y +I++ L P G G L  A E+ K++L  EGL 
Sbjct: 137 PRLRFALRDGLEVVAEGSVDVYAPQGRYSLIVQKLEPVGEGALALAFEQLKERLAAEGLI 196

Query: 134 ---SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
                +   P+PF+P+ I V+TS TGA ++D L+ +S R P L V++   +VQG+    E
Sbjct: 197 GSRRIRPPRPLPFLPRRIGVVTSRTGAALQDFLRVLSSRHPRLSVLLCDARVQGEGSAPE 256

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A AI +L            D+I++ RGGGS+EDLW FN+E++ RAI  S +P++SAIGH
Sbjct: 257 VARAIARL-------GRTDVDVIVVTRGGGSVEDLWTFNEEVVARAIHASPVPVVSAIGH 309

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T+AD+ AD RAPTP+ AAE   PV   L+ +L    ARL     R +         
Sbjct: 310 EIDFTIADFVADFRAPTPSAAAERLAPVLSDLELALDTHAARLRQAAERRVLELRERQGH 369

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L +  + L   R  L     E+   L   +  K      +  R++       + + 
Sbjct: 370 LAGRLVDPRRRLGQERLHLSEQLEEMMRALRPALRTKREALRALQERLQRARPQARLGEQ 429

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R H+      +++ ++  +     +       L + R     R+      +     R+  
Sbjct: 430 RAHLHRLAARLQEALRLGVATRRADLAR--GRLGLERASPTLRVAAERARVNAHKARLLA 487

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILIN 488
           + +  +             L + +    + RGY    + T+   +    ++     + I 
Sbjct: 488 LQAQVLADSQGRFQRLAAQLDALSPLKIMSRGYAVAFRKTDGAVVRSITDVQPGMTLGIK 547

Query: 489 FF-DG--------QANAIVINKAPPKE 506
           F  +G        +  A V     P +
Sbjct: 548 FANNGARTLGGCEEIEATVTAVKGPTD 574


>gi|77164136|ref|YP_342661.1| exodeoxyribonuclease VII [Nitrosococcus oceani ATCC 19707]
 gi|254435291|ref|ZP_05048798.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus oceani
           AFC27]
 gi|76882450|gb|ABA57131.1| Exodeoxyribonuclease VII large subunit [Nitrosococcus oceani ATCC
           19707]
 gi|207088402|gb|EDZ65674.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus oceani
           AFC27]
          Length = 452

 Score =  357 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 141/506 (27%), Positives = 232/506 (45%), Gaps = 55/506 (10%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   S   +     Y++S L+   +HI+E +   + + GEIS      SSGH YF+LKD 
Sbjct: 1   MESPSHNLNPTREIYTISRLTREARHILEGSFPLLWIEGEISNL-SRPSSGHFYFTLKDK 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I   +++     + F  EEG + L   ++  +    ++Q+I+E L  +G G L  A 
Sbjct: 60  IAQIRCAMFRNRNRLLGFSLEEGTQVLARVQVGLYEARGEFQLIVEYLEEAGDGALRRAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  K++L  EGLF+  HK  +P +P+ I +ITSP+GA IRDIL  +  RFP + V+I+P 
Sbjct: 120 EALKQRLSAEGLFAAAHKRSLPILPQRIGIITSPSGAAIRDILSVLKRRFPAVPVLIYPT 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+   + IA AI +             D++ILARGGGS+EDLW FN+E + R I + 
Sbjct: 180 PVQGEGAFQRIAAAIAK------AEQHRACDLLILARGGGSLEDLWAFNEEALARVIYHC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +PII  +GHE D+T+AD+ AD RAPTP+ AAEMAVP       + +NLE RL  +  + 
Sbjct: 234 PLPIICGVGHEIDFTIADFTADQRAPTPSAAAEMAVPDSREWYRNFLNLEQRLKLLFQQH 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++++   L +L K L +    L     ++D L + LE     +   ++     +  ++  
Sbjct: 294 LRHRRQLLENLTKRLRHPHIRLQEGIQQVDELEQRLERAWTHLNRERFHQLGGLSIQL-- 351

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                             Q +                                +   H  
Sbjct: 352 ------------------QRL---------------------------NPAQHLKAYHLR 366

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +++L  R+      ++      + +  R L + + + TL+RGY  +       + +   +
Sbjct: 367 LRELNRRLPTCQQQRLGQQQMRLEMVQRALHAVSPQATLERGYAIVTGPKGIVLRKASQV 426

Query: 480 ATKTRILINFFDGQANAIVINKAPPK 505
               +I     +G     V       
Sbjct: 427 QPGAKIEARLAEGHIRGEVTEILDKP 452


>gi|297584558|ref|YP_003700338.1| exodeoxyribonuclease VII large subunit [Bacillus selenitireducens
           MLS10]
 gi|297143015|gb|ADH99772.1| exodeoxyribonuclease VII, large subunit [Bacillus selenitireducens
           MLS10]
          Length = 454

 Score =  357 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 59/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   +SV+EL+  +K   +   +L +V +R EIS ++  HS GH YF+LKD  SRI ++
Sbjct: 1   MNQEFWSVTELTKTIKEKFDTAPDLQNVWLRAEISNFKH-HSRGHMYFTLKDAGSRIQSV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G+   ++F PE G+  L+ G+++ +    +YQ+ ++ + P G G L  A E+ K+KL
Sbjct: 60  MFAGSNRYLKFTPENGMSVLIRGQVSVYEPYGQYQLYVKEMQPDGIGNLYLAFEELKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS + K  IP  PK IAV+TSPTGA +RD++  ++ R+P+  V + PV+VQG+  
Sbjct: 120 DREGLFSQESKKRIPRTPKRIAVVTSPTGAAVRDMITTLNRRYPVASVTLLPVQVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI Q             D++I+ RGGGS+E+LW FN+E + RAI + +IP+ISA
Sbjct: 180 APTIVKAIRQ------AEEEGSFDVLIVGRGGGSLEELWAFNEESVARAIFSCTIPVISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T++D+ ADLRA TPT AAE+AVP ++ +   LI+ + RL +   +++  +   
Sbjct: 234 VGHETDVTISDFVADLRAATPTAAAELAVPDQQEMIDWLIDRKKRLRHSFNQMVTREQTR 293

Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L       A     Q +      LDRL   L    +  I        ++  R+       
Sbjct: 294 LQRLMASYAFRYPKQLIEQKEQDLDRLLDRLHAATDRKIDVHQEAVRYLYGRLYVQHPAR 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + R ++   ++ +   +      +    +   +                        
Sbjct: 354 RIDQERINLERSKKALVDAMTDQSNSVRQALQLLAS------------------------ 389

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + +GY+   D N N + +   L     
Sbjct: 390 -----------------------KLDLLSPLKLMAKGYSLTYDQNGNLVKEIDQLNEGDG 426

Query: 485 ILINFFDGQANAIVINKAPPKE 506
             +   DG+ N  V  K   K 
Sbjct: 427 FTVRLQDGELNGEVKAKKRVKR 448


>gi|330965926|gb|EGH66186.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 459

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKRQVRLAHMESRLTAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLTAKLGEGELQVRVED 447


>gi|329119682|ref|ZP_08248363.1| exodeoxyribonuclease VII large subunit [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327464279|gb|EGF10583.1| exodeoxyribonuclease VII large subunit [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 450

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/493 (27%), Positives = 220/493 (44%), Gaps = 58/493 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E + S + V GE+S      +SGH YFSLKD  +++   ++KG   
Sbjct: 10  LSVSELNAAAKLLLEEHFSGLWVAGEVSNLT-RAASGHYYFSLKDARAQVRCAMFKGVAQ 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     +EG    V G+I+ +    ++QI +  +   G G L  A E+ K  L  EGLF+
Sbjct: 69  RFA-AMKEGDHIEVRGRISIYEARGEFQITVNEVRVKGLGRLYEAYEQLKAALQAEGLFA 127

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+P  P+ I ++TSP  A +RD+L  +  R P L VI++P  VQG E   ++  A
Sbjct: 128 AERKRPLPAHPQRIGIVTSPAAAALRDVLSTLRRRAPDLPVILYPAAVQGAEAAPQLVRA 187

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +   E       D++I+ RGGGSIEDLW FN+E +VRA+A   IP++S +GHETD+
Sbjct: 188 VNAASERGE------CDVLIVCRGGGSIEDLWPFNEEAVVRAVAACRIPVVSGVGHETDF 241

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL D+AAD RAPTPT AAE+A P +  L   L   E RL    +   +      +   + 
Sbjct: 242 TLTDFAADTRAPTPTAAAELAAPDRATLLHRLAEAEGRLKTAALYRYQDAAQRTDWCARQ 301

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  Q L   R R+      L       +       +                  RQ++
Sbjct: 302 LRHPRQKLDAQRARVAECAARLAAAARACLRLSDEKLS------------------RQNL 343

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           L +    +   +                          R+    T + +    +      
Sbjct: 344 LLQHARPDTAAQTG------------------------RLNAFQTALTRNAGVLLAA--- 376

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                   +     +L + + ++ L RG++ +++T    +     L     + I F +G+
Sbjct: 377 ----KKQRLEKQAALLDAVSPQHILARGFSVVRNTRGQVVRDAAALKQGQTLHITFAEGE 432

Query: 494 ANAIVINKAPPKE 506
           A   V +     +
Sbjct: 433 AAVRVSSDTAQPD 445


>gi|330957539|gb|EGH57799.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 459

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 237/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHKRQVRLAHMESRLTAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDVLAERLPRAMREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRTAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|238788163|ref|ZP_04631958.1| Exodeoxyribonuclease 7 large subunit [Yersinia frederiksenii ATCC
           33641]
 gi|238723750|gb|EEQ15395.1| Exodeoxyribonuclease 7 large subunit [Yersinia frederiksenii ATCC
           33641]
          Length = 463

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 145/507 (28%), Positives = 229/507 (45%), Gaps = 57/507 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++   +++ T 
Sbjct: 9   IFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAMFRNTN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++L  EGLF
Sbjct: 68  RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLAVEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK  +P   K + VITS +GA + D+LQ +  R P L VII+P  VQG + P +I  
Sbjct: 128 DQSHKQSLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGADAPLQIVR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+GHETD
Sbjct: 188 AIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +      L  
Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRSQQFTRLEH 301

Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R +    +L R LE + +  I    R    +  R+        I +  
Sbjct: 302 RLQQQHPHLRLARQQTLLLKLQRRLEESAQAQIRLLSRRTERLQQRLVQVQPQGQIHRYN 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + +++  + Q                                                
Sbjct: 362 QRVQQQEYRLRQ-----------------------------------------------A 374

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L  ++        I    L++ +   TL RGY+  Q      +   + + T  ++     
Sbjct: 375 LERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGTLLKTTQQVHTGDKLTTRLQ 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNN 517
           DG   + +      K+  TKK +    
Sbjct: 435 DGWVESEITQINVAKKNVTKKPRQRKA 461


>gi|121635069|ref|YP_975314.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis
           FAM18]
 gi|158513147|sp|A1KUI5|EX7L_NEIMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|120866775|emb|CAM10528.1| exonuclease VII large subunit [Neisseria meningitidis FAM18]
 gi|325132444|gb|EGC55137.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M6190]
 gi|325138218|gb|EGC60787.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           ES14902]
          Length = 451

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                KN I  L T +    +++     
Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ ++DT    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|258511743|ref|YP_003185177.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478469|gb|ACV58788.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 469

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 154/505 (30%), Positives = 240/505 (47%), Gaps = 59/505 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58
           MN  ++  +      +V+EL+  +K  +ES+  L    V GEIS ++    SGH YF+LK
Sbjct: 1   MNALTRAAAEAEAVLTVTELNRRIKERLESDPRLIQCRVVGEISNFKHHP-SGHMYFTLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  SRI A+++     +++F PE+G+  +  G +  F    +YQ+ +E L P G G L  
Sbjct: 60  DETSRIRAVMFSSRNRRLQFQPEDGMRVIAFGSVGVFERDGQYQLYVEDLEPDGLGALYV 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIF 177
             E+ +++L  EGLF+ + K  +P  P  + V+TSPTGAVIRDI   I  R+PL RVI+ 
Sbjct: 120 RYEQLRQQLAAEGLFAPERKRLLPRFPLRVGVVTSPTGAVIRDICTTIERRYPLARVILA 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P +VQG +    I  A+  L  L      P+ D+II+ RGGGS+E+LW FN+EM+VRA+A
Sbjct: 180 PAQVQGPDAAPTIVRALEVLYAL-----EPKVDVIIVGRGGGSLEELWPFNEEMVVRAVA 234

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S +P++SA+GHETD TL D+AAD+RA TPT AAE+  P +  L++ L    AR     +
Sbjct: 235 RSPVPVVSAVGHETDVTLCDFAADVRAATPTAAAELVCPHQAELRAYLEQASARARKAAL 294

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + +    L  L     L +  + ++  R  +D +   +       I  + R    +  
Sbjct: 295 VKVAWGRERLLDLAGRPVLRDPTRIIAVRRQLVDFIETRVREAQRRPIGLRRRALADLER 354

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R++   L   IQ  R+ ++  +  +  +                                
Sbjct: 355 RLQRVQLGGAIQGRRRDLMRLEHQVRSLT------------------------------- 383

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FIT 474
                             ++      +      L++      L+RGY  I D +    IT
Sbjct: 384 ----------------ERQLLVQSRKLEGVIGKLEALNPLAVLRRGYGVILDEDGRSVIT 427

Query: 475 QKRNLATKTRILINFFDGQANAIVI 499
             ++LA   RI I   DG   A V 
Sbjct: 428 SAQSLAPGKRIGIRMHDGTVEAEVK 452


>gi|323488927|ref|ZP_08094164.1| exodeoxyribonuclease 7 large subunit [Planococcus donghaensis
           MPA1U2]
 gi|323397319|gb|EGA90128.1| exodeoxyribonuclease 7 large subunit [Planococcus donghaensis
           MPA1U2]
          Length = 453

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 144/498 (28%), Positives = 239/498 (47%), Gaps = 59/498 (11%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           P  SV  L+ ++K   +   +L  V V+GE+S  + IH+SGH YF+LKDN +R+  +++ 
Sbjct: 5   PYLSVKALTKYIKKKFDADPHLRDVYVKGELSNVK-IHTSGHIYFTLKDNSARLPGVMFS 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
            +   ++F PE G+  L+ G +T +  S +YQ+  +S+   G G    A E+ K+KL +E
Sbjct: 64  ASAKSVKFKPESGMTVLIRGDVTVYEASGQYQLYAQSMQVDGIGDYYLAFEQLKEKLAKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           G+F   HK  +P  PK IAV+T+ TGA +RDI+  +  R+PL  V+++P  VQG    + 
Sbjct: 124 GVFDASHKKRLPRFPKRIAVVTAQTGAAVRDIIITLHRRYPLANVVLYPALVQGSGAVQS 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  +I   N           D++I+ RGGGSIEDLW FN+E + RAI +S IPIISAIGH
Sbjct: 184 IVQSIQAANK-------DDFDVLIVGRGGGSIEDLWAFNEEAVARAIFSSEIPIISAIGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD T+AD+ +DLRAPTPT AAE+AVP +  L   + +  +                   
Sbjct: 237 ETDTTIADFVSDLRAPTPTAAAELAVPSQAELLERISSYRS------------------- 277

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR-HFNHIINRIKSDFLIHNIQK 368
             +   N    +S  +  L RL           ++R +        + ++ + L H + +
Sbjct: 278 --QMYRNVSSAVSQQKQALHRLTSSYPLAYPERLYRPFIERVERATDSLQRESLQH-LNR 334

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           ++++     Q ++  +                           +I    T + +L  R++
Sbjct: 335 SKEYYRTLDQRLKSRM------------------------PLQQIRQSETDVTELARRLD 370

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           + +   +K+    +S   R L + +    + RGY+         +     +    ++ + 
Sbjct: 371 YQIKQLLKNHSRQLSSAIRTLDALSPLKIMDRGYSIPYIE-GAVVKSVEQVTAGDKLTLA 429

Query: 489 FFDGQANAIVINKAPPKE 506
             DG   A V    P  +
Sbjct: 430 MQDGTIQATVNEINPAPK 447


>gi|300115025|ref|YP_003761600.1| exodeoxyribonuclease VII large subunit [Nitrosococcus watsonii
           C-113]
 gi|299540962|gb|ADJ29279.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus watsonii
           C-113]
          Length = 452

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 146/506 (28%), Positives = 239/506 (47%), Gaps = 55/506 (10%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   S   +     Y++S L    +H++E +   + + GE+S      SSGH YF+LKD 
Sbjct: 1   MENTSYNLNPAREIYTISRLVREARHLLEGSFPLLWIEGEVSNL-SRPSSGHFYFTLKDK 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++G    +    EEG++ L   ++  +    ++Q+I+E L  +G G L  A 
Sbjct: 60  TTQVRCAMFRGRNRLLGITLEEGMQILARVQVGLYEARGEFQLIVEYLEKAGDGALRRAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  K++L  EGLF+  HK  +P +P+ I +ITSP+GA IRDIL  +  RFP + V+I+PV
Sbjct: 120 EALKQRLSSEGLFATSHKRSLPILPRQIGIITSPSGAAIRDILSVLKRRFPTVPVLIYPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+   ++IA AI +             D++ILARGGGS+EDLW FN+E + RAI + 
Sbjct: 180 PVQGEGAAQKIATAIAK------AEQQHTCDLLILARGGGSLEDLWAFNEEALARAIYHC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPIIS +GHE D+T+AD+AAD RAPTP+ AAEMAVP       +++NLE RL ++  + 
Sbjct: 234 PIPIISGVGHEIDFTIADFAADQRAPTPSAAAEMAVPDSREWYRNVLNLEQRLGSLFQQR 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++Y   +L SL + L +    L     R+D L + L+     +   +      +  +++ 
Sbjct: 294 LRYLRQSLESLTQRLRHPQARLQEGAQRIDELEQRLDRAWTHLKRERLHQLGGLSLQLQR 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++     + E  Q +    +QH                                
Sbjct: 354 LNPAQYLKACHLRLGELNQLLHTYQQQH-------------------------------- 381

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                          ++     + +  R LQ+   + TL+RGY  +       + +   +
Sbjct: 382 ---------------LEKQRMQLEMAQRSLQAINPQTTLERGYAIVTGPKGIVLRKASQV 426

Query: 480 ATKTRILINFFDGQANAIVINKAPPK 505
               RI +   +G     V       
Sbjct: 427 QPGARIEVQLAEGHIRGEVTETLDKP 452


>gi|330895899|gb|EGH28184.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330936964|gb|EGH41070.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 459

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+ +  V +
Sbjct: 428 TGQRLTARLSEGELHVRVED 447


>gi|261392362|emb|CAX49902.1| exodeoxyribonuclease VII large subunit (exonuclease VII large
           subunit) [Neisseria meningitidis 8013]
          Length = 451

 Score =  356 bits (914), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 133/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L ++++  +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLEQTLSYSMKQNLRAHTARFERQTQALQHCRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                  ++  +      +   ++                                    
Sbjct: 356 CKNNIVRLQTALSHAFHQLLTHRR------------------------------------ 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                   S++    +L++ + ++ L+RG++ ++DT    I     L    ++ I F DG
Sbjct: 380 -------QSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|160876249|ref|YP_001555565.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS195]
 gi|189037841|sp|A9KWW8|EX7L_SHEB9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|160861771|gb|ABX50305.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS195]
 gi|315268438|gb|ADT95291.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS678]
          Length = 448

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 219/494 (44%), Gaps = 57/494 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  Y+VS L+  ++ I+E  L  + + GEIS +    SSGH Y +LKD+ S+I   ++KG
Sbjct: 6   NNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAMFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F P  G + LV G I+ +     YQ++IES++P+G G L    +  K KL  EG
Sbjct: 65  RNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLAAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P   + I VITSPTGA IRD+L  ++ R P + VII+P +VQG+   + I
Sbjct: 125 LFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAAQSI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI   N   E       D+++L RGGGS+EDLW FN E +   I NS++P++SA+GHE
Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T++DY AD+RAPTP+  AE+     ++    L    +RL          +   L+ L
Sbjct: 239 VDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRLSLL 298

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      +TL     R D +   LE  L   +    R    + +R++     H +  
Sbjct: 299 EHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHKLAI 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +      ++  ++                                           
Sbjct: 359 EGNRLSYLASRLQDALQD------------------------------------------ 376

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                K+      +      L++ +   TL RGY+   D +N        L     +   
Sbjct: 377 -----KLSQSEQRIQYAAHQLETVSPLATLSRGYSITTDIHNQVADSADKLTIGDSLQTR 431

Query: 489 FFDGQANAIVINKA 502
           F  GQ  + V    
Sbjct: 432 FRHGQVISTVTQIK 445


>gi|88799910|ref|ZP_01115482.1| exodeoxyribonuclease VII large subunit [Reinekea sp. MED297]
 gi|88777341|gb|EAR08544.1| exodeoxyribonuclease VII large subunit [Reinekea sp. MED297]
          Length = 451

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 145/494 (29%), Positives = 236/494 (47%), Gaps = 55/494 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VS+L+  +K ++E+    V V+GEIS      +SGH YF+LKD   ++   ++KG+L
Sbjct: 9   PLTVSQLNRQVKQLLETQYPAVPVQGEISTL-SRPASGHLYFTLKDAQGQLRCAMFKGSL 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K  + P++G E +  G+++ + G   YQ+I+  + P G G L  A  + K+KL  EGLF
Sbjct: 68  AKNAYKPKQGDEVIAYGRVSLYEGRGDYQLIVNQMQPVGEGELQAAFFRLKEKLAAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           S++HK  +P   + I ++TS TGA + DIL  ++ RFP  RVI++P +VQG+E    I N
Sbjct: 128 SEEHKKSLPDPIQTIGIVTSSTGAALHDILTVLNRRFPATRVILYPTQVQGNEATATIVN 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N  +E       D +I+ RGGGS+EDLW FN E + RAI  S IP+ISA+GHE D
Sbjct: 188 AITTANRRRE------VDALIVGRGGGSLEDLWCFNTEPVARAIYASEIPVISAVGHEVD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            +++D+ ADLRA TP+ AAEM  P +  L       E +L   I + +K    TL  L +
Sbjct: 242 VSISDFVADLRAATPSQAAEMISPDQFELMQRFDVAEKQLLRSIQQTLKRSHTTLTHLKQ 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L + D  +     +L +L        +  +         + NR+        + ++R  
Sbjct: 302 RLRSPDAIVQQWHQQLRQLRTRFTQATQRQLKMPSDRLQQLSNRLLQRSPQRQLAQDRTQ 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           I + +  +++               K+A+LH  RE                         
Sbjct: 362 IEKLEARLQRA--------------KLALLHRKRE------------------------- 382

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                           L + +   TL+RGY+  +  +   +     +    R++     G
Sbjct: 383 --------HFQGQVATLNALSPLGTLQRGYSISRTEDGTVLQSADQMKPGDRLITLLRHG 434

Query: 493 QANAIVINKAPPKE 506
           Q ++ +   + P +
Sbjct: 435 QLSSRIETVSVPDD 448


>gi|66044507|ref|YP_234348.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           syringae B728a]
 gi|75503072|sp|Q4ZX12|EX7L_PSEU2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|63255214|gb|AAY36310.1| Exonuclease VII, large subunit [Pseudomonas syringae pv. syringae
           B728a]
          Length = 463

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 240/500 (48%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 66  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 186 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L   LE  + ++     H+ +R+ + 
Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRALEQTMHQRQLRLAHMQSRLAAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 395 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+ +  V +
Sbjct: 432 TGQRLTARLGEGELHVRVED 451


>gi|238797971|ref|ZP_04641461.1| Exodeoxyribonuclease 7 large subunit [Yersinia mollaretii ATCC
           43969]
 gi|238718176|gb|EEQ10002.1| Exodeoxyribonuclease 7 large subunit [Yersinia mollaretii ATCC
           43969]
          Length = 459

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 143/510 (28%), Positives = 227/510 (44%), Gaps = 57/510 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++   +
Sbjct: 4   SSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    E+ K++L 
Sbjct: 63  FRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF    K  +P   K + VITS +GA + D+LQ +  R P L VII+P  VQG + P
Sbjct: 123 AEGLFDQSGKQSLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGVDAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+
Sbjct: 183 LQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +    
Sbjct: 237 GHETDITIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQQF 296

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L   L      L  +R +    +L R LE + +  I    R    +  R+        
Sbjct: 297 TRLEHRLQQQHPHLRLARQQTLLLKLQRRLEESAQTQIRLLGRRTERLQQRLVQAQPQGQ 356

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  Q + +++  + Q                                           
Sbjct: 357 IHRYHQRVQQQEYRLRQ------------------------------------------- 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L  ++ S      I    L++ +   TL RGY+  Q      +   + +    ++
Sbjct: 374 ----ALERQLNSYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGVLLKTTKQVQAGDKL 429

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515
                DG   + +      K+   +K    
Sbjct: 430 TTRLQDGWVESEITQINVAKKPRQRKAAKE 459


>gi|295399117|ref|ZP_06809099.1| exodeoxyribonuclease VII, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978583|gb|EFG54179.1| exodeoxyribonuclease VII, large subunit [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 451

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 59/488 (12%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V  L+ ++K   E   +L  + ++GEIS ++  HS GH YF+LKD  +RI A+++ G  
Sbjct: 8   TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE+G++ LV G+I+ +  S  YQI ++ + P G G L  A E+ KK+L  EGLF
Sbjct: 67  QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           S +HK PIP  P+ I V+TSPTGA IRDIL  I  R+P+  VI+FP  VQG+E    I  
Sbjct: 127 SAEHKKPIPAFPRYIGVVTSPTGAAIRDILTTIRRRYPIATVILFPTLVQGEEAAGSIVR 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I + N L         D++I+ RGGGSIE+LW FN+E + RAI  S +PIISA+GHETD
Sbjct: 187 SIEKANELGY------IDVLIVGRGGGSIEELWAFNEEAVARAIFASKVPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPTGAAE+AVP    L   +   + RL   +   I  +   L  L K
Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHVTELMERISQRKLRLMRAMKEKIAAESERLLRLQK 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +      ++       +LD L   L+ + E +  +K      +  ++        + + +
Sbjct: 301 SYAFRYPEKLYEQKEQQLDALLERLQRHTERLFDKKREQLEQLRLKLLRHHPAEQLSRMK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +      + +E+ ++ H+ +  L     ++ LH L                         
Sbjct: 361 EKHESLVKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                                 +    ++RGY+ + +     +   R L     I +   
Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433

Query: 491 DGQANAIV 498
           DGQ +  V
Sbjct: 434 DGQVDCHV 441


>gi|295695405|ref|YP_003588643.1| exodeoxyribonuclease VII, large subunit [Bacillus tusciae DSM 2912]
 gi|295411007|gb|ADG05499.1| exodeoxyribonuclease VII, large subunit [Bacillus tusciae DSM 2912]
          Length = 479

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 145/511 (28%), Positives = 232/511 (45%), Gaps = 58/511 (11%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VSEL+ +++ ++E +  L  V V GEIS +   HSSGH YFSLKD  SRI A+++   
Sbjct: 9   LTVSELTAYVRELLERDELLQEVWVMGEISNFTH-HSSGHMYFSLKDAGSRIRAVMFASR 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F PEEG++ +  G++  F     YQ+ +E + P G G+L  A  + + +L +EGL
Sbjct: 68  NRKLIFRPEEGMKVVARGRVAVFDRDGTYQLYVEEMQPEGVGSLYLAFLQTRDRLQKEGL 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K P+P  P+++ VITS  GA IRDI   +  R+PL RV+IFP  VQG   P  +A
Sbjct: 128 FDRERKRPLPAFPRVVGVITSTEGAAIRDIATTLRRRYPLARVVIFPALVQGPGAPASLA 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+       E       D+II+ RGGGS E+LW FNDE + RAIA + +P++SA+GHET
Sbjct: 188 EALATACAYGE------LDVIIIGRGGGSPEELWAFNDESLARAIAAAPVPVVSAVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ADY AD+RAPTPT AAE+  P    L+  +      L + ++R ++          
Sbjct: 242 DFTIADYVADVRAPTPTAAAELVAPHVLELRRRVEEARRALVDALVRRVQGDRQ------ 295

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                                                   H++ R         IQ  RQ
Sbjct: 296 -------------------------------------RLEHLLGRPGLRRPEQWIQWRRQ 318

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +      + Q   + +            IL   R   K +I      ++    +++F +
Sbjct: 319 TVDGLHTRLGQAAWKSVFRRKEALIRLTDILG--RHSPKEQIQRSQNRLETQKQKLQFAV 376

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFF 490
               +            L++ +    ++RG++ +   +    +     LA    + +   
Sbjct: 377 WTGWQRAVHRFERQVDKLEALSPLAVMRRGWSLVYRPDRRELVRNISQLAPGDNVHVRLT 436

Query: 491 DGQANAIV--INKAPPKEQPTKKCQLHNNKR 519
            G A+  V  I +           +  +  +
Sbjct: 437 GGWADCQVWGIEEGSEDGGGATTAKEGSAPK 467


>gi|297529438|ref|YP_003670713.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. C56-T3]
 gi|297252690|gb|ADI26136.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. C56-T3]
          Length = 448

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 145/492 (29%), Positives = 232/492 (47%), Gaps = 59/492 (11%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V  L+ ++K    V+ +L  + V+GEIS ++  HS GH YF+LKD+  RI A+++ G  
Sbjct: 7   TVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAVMFAGYN 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE+G+  L  G+I+ +  +  YQ+ ++ + P G G+L  A E+ K++L  EGLF
Sbjct: 66  QHLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRLEAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           S  HK P+P  P+ I V+TS TGA +RDI+  I  R+PL +VI+FP  VQGD     I  
Sbjct: 126 SPVHKKPLPAFPRCIGVVTSQTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGAAPSIVR 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI + N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA+GHETD
Sbjct: 186 AIERANAF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISAVGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNSL 310
           +T+AD+ ADLRAPTPT AAEMA P    L   L   + RL   +        +       
Sbjct: 240 FTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKERLAADKEQLRRLQG 299

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
             A     +       +LD L   L    E ++ +  +  + +  R+        +++ +
Sbjct: 300 SYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAAELERMK 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +        +E+ ++  +       +  +A                              
Sbjct: 360 ERQKAAANALEKAMRTAVERHRFRFRSNLA------------------------------ 389

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L++ +    ++RGY+ + +     + +   L     + I   
Sbjct: 390 -----------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEHLSIQVQ 432

Query: 491 DGQANAIVINKA 502
           DG+ +  V    
Sbjct: 433 DGRVDCQVTGVE 444


>gi|298486034|ref|ZP_07004108.1| Exodeoxyribonuclease VII large subunit [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159511|gb|EFI00558.1| Exodeoxyribonuclease VII large subunit [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 459

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRSAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|256823049|ref|YP_003147012.1| exodeoxyribonuclease VII large subunit [Kangiella koreensis DSM
           16069]
 gi|256796588|gb|ACV27244.1| exodeoxyribonuclease VII, large subunit [Kangiella koreensis DSM
           16069]
          Length = 451

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 140/495 (28%), Positives = 237/495 (47%), Gaps = 55/495 (11%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
            Q+       YSVSEL++ ++  +E  +  + + GEIS    + +SGH YF+LKDN +++
Sbjct: 8   PQQTGETRKIYSVSELAFKVRKQLEDAIGQIWITGEISNL-ALPASGHWYFTLKDNGAQL 66

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              I+K       F PE+G + L+  K++ +      Q+I E + P+G G L  A  + K
Sbjct: 67  RCAIFKNRNRSARFTPEDGQQVLLRAKLSLYEPRGDIQLIGEYIEPAGEGALQIAFNRLK 126

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           +KL  EGLF+ + K PIP  P  I +ITSP+GA IRD+L  +  R P + VII+P +VQG
Sbjct: 127 EKLQAEGLFAPELKRPIPKFPNKIGIITSPSGAAIRDVLTVLKRRMPQIPVIIYPSQVQG 186

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  K +   +   N         + D++++ RGGGS+ED+W FNDE + R I +S IP+
Sbjct: 187 EKAAKSLIKQLEVANQ------HNQCDVLLVTRGGGSLEDMWCFNDETLARNIRDSRIPV 240

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SA+GHE D +++D+ ADLRAPTP+ AAE+ VP +  LQ  L+ LE RL       ++  
Sbjct: 241 VSAVGHEVDTSISDWVADLRAPTPSAAAELLVPDQAELQHKLVQLERRLTGEFEHRLQVA 300

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            + L++L+  + +  Q L+  +  L  L + L    + ++  K   +  + +R+ S    
Sbjct: 301 QSKLDTLIARIIHPKQQLNSYKVELQSLNKSLLGTQKYLLQSKQAEYKELDSRLHSYNPK 360

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + +  + +  + + Q  K                                      
Sbjct: 361 LQLSQAKNSLKQTNKSLMQSWKY------------------------------------- 383

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +       +      ++         +   TL+RGYT  +D     IT  +      
Sbjct: 384 ---LLKQKQQMLALKAQKLNNI-------SPLATLERGYTITEDETGKAITSMKQAQKSQ 433

Query: 484 RILINFFDGQANAIV 498
            +   F DG+  + +
Sbjct: 434 ELTTRFVDGKVKSKI 448


>gi|291287666|ref|YP_003504482.1| exodeoxyribonuclease VII, large subunit [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884826|gb|ADD68526.1| exodeoxyribonuclease VII, large subunit [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 493

 Score =  356 bits (913), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 124/496 (25%), Positives = 243/496 (48%), Gaps = 13/496 (2%)

Query: 15  YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           Y+V+E++  +K ++E+    +V V+GEIS +    + GH YF +KD  ++I  ++++G  
Sbjct: 4   YTVTEITRAVKGLIENTFADNVAVKGEISSFSRSPA-GHLYFVMKDEKAQIKCVMFRGMA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K+++ P+ G     +G++T +     YQ++++ L     G      E+ +KKL EEGLF
Sbjct: 63  GKLDYSPKNGDSVEAVGELTVYEAGGNYQLLVKKLDYDSVGLFWQLFEEVRKKLEEEGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
           +++ K  +PF+PK +AVITSP GA I+D L  +        V I+ V VQG +    I +
Sbjct: 123 AEELKKALPFLPKRVAVITSPEGAAIKDFLITMKNNDVVFEVDIWGVPVQGKDAVAPIVS 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+ +   + +     R D+++L RGGGS+EDL  FN+E + RA+A   +P +SAIGHE D
Sbjct: 183 ALSKAGAMTD-----RYDVVVLMRGGGSLEDLAVFNEEYVARALAACEVPTVSAIGHERD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++ D+ AD+R  TPT AA +           L +   R+ NI+ + +      L+ L+ 
Sbjct: 238 VSICDFVADVRVATPTAAASLLGEGYRSAGRDLKDFGRRMINIMNQQMMTANQRLDMLIS 297

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           ++   +  + +   R  L+ + + L  ++   +       N +   +      + +++ +
Sbjct: 298 SVNSASPAKRVLSDRRHLEHMVKSLSLHMLQSVHTGKSRVNELSKVMAKLTPQNELERRK 357

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + + ++ ++  +    R    +    +  +   R     +     + +  L+ RI+  
Sbjct: 358 SSLSDYERRLKDALLAKKRTESDKINNLMQTVA--RYAPDRKAEKYKSKLDSLLYRIQTA 415

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              +I      ++  T  L++    N L +GY+ +   +   +    +++ +  + I   
Sbjct: 416 ARSEISDNKNRLTPLTAKLEALDPHNILSKGYSFVM-KDGKPVKSVFDISLQDELEIRLN 474

Query: 491 DGQANAIVINKAPPKE 506
           DG  N+ V  K   +E
Sbjct: 475 DGYINSFVTGKKVSEE 490


>gi|254786601|ref|YP_003074030.1| exodeoxyribonuclease VII large subunit [Teredinibacter turnerae
           T7901]
 gi|237684242|gb|ACR11506.1| exodeoxyribonuclease VII, large subunit [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 151/504 (29%), Positives = 240/504 (47%), Gaps = 55/504 (10%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
              N+      SV+EL+   + ++E +L  + V GE+S      SSGH YF+LKD  +++
Sbjct: 4   PHSNTPTREIISVAELNRRARSLLELHLPLLWVEGEVSNL-SRPSSGHWYFTLKDAAAQV 62

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              +++     + F P+ G + +V  + + + G   YQ+IIE +  +G G L    E  K
Sbjct: 63  RCAMFRNRNALVRFSPKSGDKVVVRARTSIYEGRGDYQLIIEHMEDAGFGLLQRQFEALK 122

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQG 183
           +KL  +GLF+ +HK P+P +P+ IAVITSP+GA I+D+L  +  RFP   V + PV VQG
Sbjct: 123 QKLAGDGLFAPEHKRPLPVLPQHIAVITSPSGAAIQDVLSVLKRRFPATMVTVLPVAVQG 182

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +   K+I +A+   N           D+I+L RGGGSIEDLW FN E +  AI +S +P+
Sbjct: 183 EGSAKQIIDALRTANQ------SNHFDVILLCRGGGSIEDLWSFNSEALAHAIFDSKLPV 236

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SA+GHE D+T+AD+ AD+RAPTP+ AAE+  P +    SSL +LE R    I   I   
Sbjct: 237 VSAVGHEIDFTIADFVADVRAPTPSAAAELLSPDQADYLSSLGHLERRFQRAISAHIGTA 296

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L SL + L +  Q L     RLD L   L  + +  I    +   H   R  +    
Sbjct: 297 RQQLLSLQRLLRHPGQQLQAWSQRLDHLEIRLHKSWQKKIAADKKQLEHTQQRFLTQTPA 356

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + +++Q +   +Q +EQ +                                   +K  
Sbjct: 357 LKLSRSKQQLTSSEQRLEQAL--------------------------------RRTLKDQ 384

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R++  +                +L   +  NTL+RGY+  ++     +    ++    
Sbjct: 385 NARMQKAM---------------ALLNIVSPLNTLERGYSITRNAIGEVVRNSDHVNEGE 429

Query: 484 RILINFFDGQANAIVINKAPPKEQ 507
            + I    G  NA V+  +  + Q
Sbjct: 430 MLNITLHQGALNARVLKSSGTESQ 453


>gi|309378852|emb|CBX22557.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 490

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 48  VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 106

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 107 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 166

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 167 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 226

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 227 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 280

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 281 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 340

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++   RQ 
Sbjct: 341 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRP--DVSVYRQD 398

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           I   Q  +    +               +L   R+                         
Sbjct: 399 IDRFQTTLSHAFR--------------QLLARRRQS------------------------ 420

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    ++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 421 ---------LAAQASLLEAVSPQHILERGFSVVKNTRGQVICNTDVLKQGQKLHITFADG 471

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 472 ETDVRVSKEQ 481


>gi|254427126|ref|ZP_05040833.1| exodeoxyribonuclease VII, large subunit [Alcanivorax sp. DG881]
 gi|196193295|gb|EDX88254.1| exodeoxyribonuclease VII, large subunit [Alcanivorax sp. DG881]
          Length = 448

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 140/498 (28%), Positives = 230/498 (46%), Gaps = 56/498 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S      S+S+L+   + ++ES+   + ++GE+S      +SGH YFSLKD  ++I+  +
Sbjct: 4   SSRAEPLSISQLNLDAQGLLESSFPLIWLQGELSNL-SRPASGHWYFSLKDTRAQINGAM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F P+ G + LV  K+T +     +QI++E + P+G G L    +  K +L 
Sbjct: 63  FRNRNRLLDFAPQNGQQVLVRAKVTLYVPRGNFQIVVEHMEPAGQGALKAQFDALKAQLQ 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K  +P  P  I VITSP+GA IRDILQ +  R P + V+I+P  VQG + P
Sbjct: 123 SEGLFAQDRKQALPAWPSQIGVITSPSGAAIRDILQVLQRRCPSIPVVIYPAAVQGADAP 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            ++  A+    T  E       D++I+ RGGGS+EDLW FNDE + RA+A   IPI+SA+
Sbjct: 183 AQLRQALGLAVTRNE------CDVLIIGRGGGSLEDLWAFNDEALTRAVAECPIPIVSAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D  L D+AADLRAPTP+ AAE+  P    +   L  L  RL   + + ++     L
Sbjct: 237 GHEVDTGLTDFAADLRAPTPSAAAELVSPDLSVVSQRLAGLHRRLRWAMAQQLRTPQERL 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L + L +  Q L  S  RLD L   L+  ++  +            R+        + 
Sbjct: 297 RHLSQRLRSPRQHLEQSSQRLDELHNRLQRQMQHRLTLLQGRLQPSQQRLARLSPERLLL 356

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             +Q +    + + Q +++ ++   ++                                 
Sbjct: 357 DRQQQLAALNKRLPQPIQRQIQQQQVQ--------------------------------- 383

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                         ++  ++ LQ+ +   TL RGY+     ++  +     L     +  
Sbjct: 384 --------------LAGLSKRLQTASPLETLARGYSITFKGDD-AVRSVSQLQPGDTLTT 428

Query: 488 NFFDGQANAIVINKAPPK 505
              DG+  A V +     
Sbjct: 429 RLVDGEVTARVEHVQESD 446


>gi|149181860|ref|ZP_01860349.1| exodeoxyribonuclease VII large subunit [Bacillus sp. SG-1]
 gi|148850399|gb|EDL64560.1| exodeoxyribonuclease VII large subunit [Bacillus sp. SG-1]
          Length = 449

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 141/503 (28%), Positives = 255/503 (50%), Gaps = 60/503 (11%)

Query: 10  LDHPEY-SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           ++ P+Y ++  L+ ++K   +   +LS + ++GEIS ++  HSSGH YF+LKD  +RI A
Sbjct: 1   METPQYLTIQALTKYIKRKFDKDPHLSGIYLKGEISNFK-RHSSGHMYFTLKDEKARILA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++      ++F PE G++ LV G I+ +    +YQI ++ + P G G L  A ++ K+K
Sbjct: 60  VMFSSANASMKFNPENGMKVLVRGDISVYEAGGQYQIYVKEMQPDGIGDLFLAYQQLKEK 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L ++GLF+D  K P+P  P+ I VITSPTGA +RDI+  I  R+P+  ++++P  VQG+ 
Sbjct: 120 LEKQGLFNDGRKRPLPKFPRKIGVITSPTGAAVRDIITTIERRYPIAEILVYPALVQGER 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K +A+ I + N           D++I+ RGGGSIE+LW FN+E +  AI+ SSIP+IS
Sbjct: 180 ASKSVADCIKKAN------DNKGIDVLIVGRGGGSIEELWAFNEERVALAISESSIPVIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD+T+AD+AAD+RAPTPT AAE+AVP  + L   +++ +  L   +   +  + +
Sbjct: 234 AVGHETDFTIADFAADMRAPTPTAAAELAVPHIDDLLERVLSRKVMLIRGMKARLNTEKS 293

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L S+  ++   N  +        +DRL  +L     + +  +     H+ + ++     
Sbjct: 294 RLKSVSSSIVFRNPRRLYEQKIEAVDRLTEKLNRTQHLRMQTQRDKLAHLNSSLRRVHPG 353

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
              ++  +  L  ++H++                                          
Sbjct: 354 RLWEQKNEEYLRMEKHLQVQFL-------------------------------------- 375

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                    + +K   +  S T   L++ +    + RGY+ +   +   +  K  +    
Sbjct: 376 ---------NILKQKQSDFSKTISTLEALSPLKVMDRGYSLVYSQDEKLVKTKEVVKEGE 426

Query: 484 RILINFFDGQANAIVINKAPPKE 506
           ++ ++  DG+ +  + +    + 
Sbjct: 427 KVTVHLQDGKLHCRIDSIEESES 449


>gi|268589341|ref|ZP_06123562.1| exodeoxyribonuclease VII, large subunit [Providencia rettgeri DSM
           1131]
 gi|291315367|gb|EFE55820.1| exodeoxyribonuclease VII, large subunit [Providencia rettgeri DSM
           1131]
          Length = 455

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 136/508 (26%), Positives = 236/508 (46%), Gaps = 57/508 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S ++  YSVS+L+  ++ +++S +  + +  EIS +    SSGH Y +LKD+ +++ A
Sbjct: 2   STSQNNAIYSVSKLNQTVRELLDSQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++G   ++ F P+ G + LV   +T +     YQ+I+ES+ P+G G L    E  K+ 
Sbjct: 61  AMFRGQNARVTFRPQNGQQVLVRATVTLYEPRGDYQLILESMQPAGEGLLQQRFELLKQT 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  +GLF   HK P+P   K + +ITS TGA + DIL  +  R P L +II+P  VQG+ 
Sbjct: 121 LSAQGLFDIIHKKPLPSPAKSVGIITSATGAALHDILNILRRRDPSLPIIIYPTAVQGEL 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +IA  I   N  +E       D++I+ RGGGS+EDLW FN+E++ RAI  S +PIIS
Sbjct: 181 APAQIARMIELANLRQE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFASQLPIIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+ADY AD+RAPTP+ AAE+    +  +   L + +  L   +   +  +  
Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQLEMLRQLKSAQQHLEMAMDYYVAGQQQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R       L ++L  ++   +      F  +  R+  + L 
Sbjct: 295 RFARLHHRLQQQHPQLRLARQYNQLNLLQQKLAQSMTRQLQNSTAKFERVNRRLLQNDLR 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +QK ++ + + Q H++ +                                        
Sbjct: 355 PQLQKQQRQLQQTQYHLQNM---------------------------------------- 374

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  ++  + S     ++    +++ +   TL RG++  +      + +   +    
Sbjct: 375 -------ITSLVNSYRQRFAVACSKMEAVSPLATLARGFSISETAEGTVLKKTSQVKLGQ 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
            +     DG   + + +    K +   K
Sbjct: 428 PLKTRLNDGWVESQITHIEKVKTKRVSK 455


>gi|82702159|ref|YP_411725.1| exodeoxyribonuclease VII, large subunit [Nitrosospira multiformis
           ATCC 25196]
 gi|82410224|gb|ABB74333.1| Exodeoxyribonuclease VII large subunit [Nitrosospira multiformis
           ATCC 25196]
          Length = 447

 Score =  355 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 134/488 (27%), Positives = 225/488 (46%), Gaps = 57/488 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVSEL+ + K ++E       V GEIS  +    SGH YFSLKD  +++  ++++     
Sbjct: 15  SVSELNRNAKELLEQAFPLSWVAGEISNIKCY-GSGHWYFSLKDEIAQVRCVMFREKNQY 73

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           +++ P +G+   V   +T +     +Q+ IE++  +G G+L  A E+ K +L +EGLF  
Sbjct: 74  LDWQPRDGMRVEVRALVTLYHARGDFQLNIETIRHAGLGSLFEAFEQLKARLGKEGLFDS 133

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  PK I +ITSP  A + D+L  +  R P + +I++P  VQG      IA AI
Sbjct: 134 ERKKPLPEFPKQIGIITSPAAAALHDVLSTLQRRMPSVPIIVYPTIVQGAGASVRIAGAI 193

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
               +  E       D++IL RGGGS+EDLW FN+E++ RAIA  SIPI+S +GHETD+T
Sbjct: 194 QTAASRAE------CDVLILCRGGGSLEDLWAFNEEVVARAIAACSIPIVSGVGHETDFT 247

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+ AD+RAPTPTGA+++  P +  +      L  R+   + R I+ ++   + L   L
Sbjct: 248 IADFVADVRAPTPTGASQLVCPDRAEVARCGEILRGRMYRAMQRRIESRMQHTDMLGCRL 307

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + +     +L RL   LE         ++     +  R+K         + RQ   
Sbjct: 308 VHPGKRIEAQLAQLARLRERLESAWLRHAKERHWRLRELQQRMKIARPDIPRLEGRQQ-- 365

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           +    +++ +   +  + +  + + A                                  
Sbjct: 366 QLGLRLQRAIASRIETLGMHLQRREAN--------------------------------- 392

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                         L      + L RGY+    ++   + +   +     I + F  G +
Sbjct: 393 --------------LSHLNPDSVLARGYSIAYTSDGTVLRRNDQVDVGDVIRVTFAKGWS 438

Query: 495 NAIVINKA 502
            A V+ K 
Sbjct: 439 KASVMEKG 446


>gi|320322910|gb|EFW79000.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329967|gb|EFW85955.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 459

 Score =  355 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS +    +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNF-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARRLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|89099253|ref|ZP_01172131.1| exodeoxyribonuclease VII large subunit [Bacillus sp. NRRL B-14911]
 gi|89086099|gb|EAR65222.1| exodeoxyribonuclease VII large subunit [Bacillus sp. NRRL B-14911]
          Length = 446

 Score =  355 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 157/492 (31%), Positives = 240/492 (48%), Gaps = 57/492 (11%)

Query: 15  YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V  L+ ++K   +   +L  + V+GEIS ++  HSSGH YF+LKD  SRI A+++  +
Sbjct: 7   LTVGALTLYIKRKFDHDPHLQEIFVKGEISNFK-RHSSGHMYFTLKDEKSRILAVMFSRS 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              ++F PE G++ L+ G+I+ +  S +YQI ++ + P G G L  A E+ K++L +EGL
Sbjct: 66  ARSVKFEPENGMKVLISGEISVYEPSGQYQIYVKQMQPDGVGDLFLAFEQLKERLQKEGL 125

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+ + K PIP  PK + VITSPTGA +RDI+  I  RFP+  ++I+P  VQG +    +A
Sbjct: 126 FASERKRPIPKFPKTVGVITSPTGAAVRDIITTIKRRFPIANILIYPALVQGAQAAPSVA 185

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N   E       D++I+ RGGGSIE+LW FN+E + RAI  S IP+ISA+GHET
Sbjct: 186 GAIELANLQAEA------DVLIVGRGGGSIEELWAFNEEQVARAIVGSDIPVISAVGHET 239

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+AAD RAPTPTGAAEMAVP        +  L  R+ N   RLI+          
Sbjct: 240 DFTIADFAADHRAPTPTGAAEMAVP-------HIDELAERILNRQSRLIRAMRERAV--- 289

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R RL RL +         ++                          Q
Sbjct: 290 -----------LQRERLGRLQKSYAFRYPQRLYE-------------------------Q 313

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR-IEFI 430
            + +  +  EQ+ K   R   L+++E+  +L  L     N ++          +R +   
Sbjct: 314 KLEQADKMTEQLKKSAGRLAELKREERDRLLQRLLRNHPNDLYKEAKETHLRGSRALGRA 373

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +       S     L++ +    + RGY+         +     +     + +   
Sbjct: 374 MKEVLTKKQKEFSGMVSTLEALSPLKIMDRGYSLAYSGEGELLKSVSQVEKGDDVQVKLA 433

Query: 491 DGQANAIVINKA 502
           DG  N  V  K 
Sbjct: 434 DGTFNCKVTGKE 445


>gi|330975916|gb|EGH75982.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 459

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+ + ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKRADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+ +  V +
Sbjct: 428 TGQRLTARLGEGELHVRVED 447


>gi|330969058|gb|EGH69124.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 459

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDVLAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+ +  V +
Sbjct: 428 TGQRLTARLGEGELHVRVED 447


>gi|325134401|gb|EGC57046.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M13399]
          Length = 451

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI + ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      +K      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                K  I    T +     ++     
Sbjct: 356 ------------------------------------CKKNIDRFQTALSHAFHQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|88706903|ref|ZP_01104602.1| exodeoxyribonuclease VII large subunit [Congregibacter litoralis
           KT71]
 gi|88698825|gb|EAQ95945.1| exodeoxyribonuclease VII large subunit [Congregibacter litoralis
           KT71]
          Length = 451

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 49/496 (9%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              ++     S S+L+   + ++ES+ S+V + GE+S +    SSGH YF+LKD+ +++ 
Sbjct: 2   PSTTVAADVLSPSQLNRQARSLLESHFSYVWIEGELSNF-ARPSSGHWYFTLKDDKAQVR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++K    ++ F P  G +  V  +++ + G  ++Q+I E L P+G+G L    E  + 
Sbjct: 61  CAMFKTYNQRLRFSPNNGDQVRVRARVSLYEGRGEFQLIGEFLEPAGAGALQARFEALRD 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF   +K P+P     +AVITSPTGA ++DILQ ++ R P +RV I PV VQG 
Sbjct: 121 QLRAEGLFDAANKQPLPRSVNHLAVITSPTGAALQDILQVLARRNPSIRVTILPVAVQGT 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           + P EI  A+ + N     R     D +I+ARGGGS+EDLW FNDE + R I  S +P++
Sbjct: 181 DAPGEIRQALQEANEYARSRYDCDFDAVIIARGGGSLEDLWAFNDEALAREIVASKLPVV 240

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           S +GHE D T+AD+AAD+RAPTP+ AAE+    +  L + L   + RL+  ++  ++ + 
Sbjct: 241 SGVGHEVDVTIADFAADVRAPTPSAAAELLSEDRVELIARLAEAQKRLHRAMVHRLERER 300

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L+ +   L +    L     RLD L   L   ++  + +          R+ S   + 
Sbjct: 301 MNLDRMRARLKHPGDRLREQAQRLDELENRLNRAIKQRLAQLQHAQQARRERLLSHSPLR 360

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +  +R+ +  ++  +E  + Q L +     + +                          
Sbjct: 361 RLTISREKVARQKAALEAAMAQKLAWHRQGLERR-------------------------- 394

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                 ++L+S      L+RGY  I D     +     ++ +  
Sbjct: 395 ---------------------EQVLKSLNPLAILERGYAIISDAQGGVVRASDAVSPEQV 433

Query: 485 ILINFFDGQANAIVIN 500
           +      G+    V +
Sbjct: 434 LEARLARGRLKLRVES 449


>gi|289626142|ref|ZP_06459096.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649048|ref|ZP_06480391.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330869566|gb|EGH04275.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 459

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|331009196|gb|EGH89252.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 459

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 137/500 (27%), Positives = 237/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L   L + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRGLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|253701626|ref|YP_003022815.1| exodeoxyribonuclease VII large subunit [Geobacter sp. M21]
 gi|259646293|sp|C6E2U7|EX7L_GEOSM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|251776476|gb|ACT19057.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. M21]
          Length = 458

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 152/515 (29%), Positives = 250/515 (48%), Gaps = 61/515 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F ++        +VS L+  ++ ++E N   V V GEIS       SGH YF+LKD 
Sbjct: 1   MQLFKERR-----VLTVSALTALVRGLLEENFEQVWVEGEISNL-ACPQSGHCYFTLKDA 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I  ++++G    ++F P +G+  L  G++T F    +YQ++ + L P G G L  A 
Sbjct: 55  GAQIRCVMFRGAFRSLKFTPRDGMRILTRGRLTLFEPRGEYQLVADYLEPQGIGGLQMAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K+KL +EGLFS+ HK  IP +P+ I ++TSPTGA IRDIL  ++ RF  + ++I PV
Sbjct: 115 IQLKEKLAKEGLFSELHKIEIPKLPRRIGIVTSPTGAAIRDILTVLNRRFTNVELLISPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +EIA+AI  LN           D++I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 175 RVQGEGAAREIADAIDDLNR------VGNIDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V  K+ L + +  L  RL+    R 
Sbjct: 229 KVPVISAVGHEIDFTIADFVADLRAATPSAAAELVVASKKELTAEVEALSHRLHVSQQRR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     + +L +A+ +  + L     R+D L   L     +I+         +  R+  
Sbjct: 289 LERSRALVTALSRAITDPSRVLGHLAQRVDSLDARLVREAGLILDDASERIVTLTARLSR 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +++  + +      ++                                      
Sbjct: 349 QTPALTLKRWEERLATLSLRLD-------------------------------------- 370

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478
                      ++ ++     SV + T  L + +   TL RGY+  +     + +T  R 
Sbjct: 371 ---------HAMTRRLACAAESVGLATGTLNAVSPLATLSRGYSITRKLPARSVVTSSRQ 421

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           LA   R+ ++F  G A   V   +   +  T   +
Sbjct: 422 LAPGDRVEVSFAAGSALCTVEQASRESDSLTAPPR 456


>gi|219870633|ref|YP_002475008.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis
           SH0165]
 gi|219690837|gb|ACL32060.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis
           SH0165]
          Length = 442

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 137/495 (27%), Positives = 239/495 (48%), Gaps = 57/495 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           + +   ++S+L+Y +K ++E     V + GEIS +     SGH Y +LKD  +++   ++
Sbjct: 1   MKNHILTISQLNYSVKQMLEVEFGSVWLIGEISNF-SQPVSGHWYLTLKDEQAQVRCAMF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F P+ G++ LV   ++ +     YQ+IIE++ P+G G L    E+ K KL  
Sbjct: 60  RMKNMRVNFRPQNGMQVLVRANVSLYEPRGDYQVIIETMQPAGDGLLQQQFEQLKMKLAG 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            GLF+ +HK PIP   K + ++TS +GA ++DIL  +  R P L ++I+P  VQG E   
Sbjct: 120 LGLFAQEHKKPIPTFVKRVGIVTSSSGAALQDILHILQRRDPTLEIVIYPTLVQGKEATA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I   N  +E       D++I+ RGGGS+EDLW FN+E +  AI +S IPIISA+G
Sbjct: 180 DIVQMIELANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAWAIYHSQIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+    ++ L   L +   ++N    RL   K+   +
Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQQELLRQLQHHADKVNLAFDRLWSEKLARFD 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   +  + L     +L  L ++L+  +E ++ RK + + + + R++ + L + I
Sbjct: 294 RLQLRLQAQHPQRQLQQRVQQLSHLEKQLKQQMEQLLLRKQQCWKNTLQRMERNPLPYRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
               QH+ + +Q +   +++++                                      
Sbjct: 354 SAQTQHLHKLEQRLSYAIEKNISQR----------------------------------- 378

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                                 L   +    L RGY+  Q+     +   +++A    I+
Sbjct: 379 ------------RQQFQTLCTQLDGLSPLAILARGYSVTQNQQGKALLSTQDIAIGETIV 426

Query: 487 INFFDGQANAIVINK 501
                G+  + V++ 
Sbjct: 427 TRLAQGKVVSQVVSI 441


>gi|298368896|ref|ZP_06980214.1| exodeoxyribonuclease VII, large subunit [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298282899|gb|EFI24386.1| exodeoxyribonuclease VII, large subunit [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 451

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG F+ + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P 
Sbjct: 115 ERLKTQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 AVQGTGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  L+ L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                ++ +            +  +    R +   +++                      
Sbjct: 349 CRPDISVYRQDI------NRFQTTLSHAFRQLLAHRRQ---------------------- 380

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                S+   T +L++ + +  L+RG++ +++T    I     L
Sbjct: 381 ---------------------SLMAQTALLEAVSPQQILERGFSVVKNTRGQVIRNANVL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F DG+ +  V  +   +E
Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQRE 446


>gi|319651491|ref|ZP_08005619.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. 2_A_57_CT2]
 gi|317396806|gb|EFV77516.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. 2_A_57_CT2]
          Length = 446

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 150/497 (30%), Positives = 241/497 (48%), Gaps = 59/497 (11%)

Query: 11  DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    +V+ L+ ++K   +   +L ++ V+GEIS ++  HSSGH YF+LKD  +RI A++
Sbjct: 3   EQQYLTVNALTKYIKRKFDADPHLQNILVKGEISNFK-QHSSGHMYFTLKDEKARILAVM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           + G    ++F PE G++ LV G I+ +  S +YQI ++ + P G G L  A E+ K+KL 
Sbjct: 62  FAGNARTMKFRPENGMKVLVRGAISVYESSGQYQIYVQEMQPDGIGELYLAYEQLKEKLE 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
           +EG FS  HK  IP  PK +AVITSPTGA IRDIL  +  R+P+  ++I+P  VQG++  
Sbjct: 122 KEGFFSPAHKKDIPRYPKTVAVITSPTGAAIRDILTTLKRRYPIANILIYPALVQGNQAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI + NT ++       D++I+ RGGGSIE+LW FN+E + RAI  S IPIISA+
Sbjct: 182 PSIVKAITEANTSRDA------DVLIIGRGGGSIEELWAFNEEAVARAIFKSEIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ ADLRAPTPTGAAE+AVP  + L   L N ++RL   +   +  +   L
Sbjct: 236 GHETDFTIADFVADLRAPTPTGAAELAVPHIDDLTERLFNRQSRLIRAMKEQVALQNERL 295

Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             + K+       +       +LD++  +L      +   K      +  R+        
Sbjct: 296 LRVQKSYAFRYPQKLYEQKMEQLDKVTEQLMRGSRRLHDLKLEQAETLQKRLVRSHPGQL 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             + +++     + + +                                           
Sbjct: 356 KNQAKENNDRLHKLLNR------------------------------------------- 372

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +++ + +     +     L++ +    + RGY+     N   I     +     I
Sbjct: 373 ----TMTNILAAKEKDFARVISTLEALSPLKIMDRGYSLAYTENETLIKTVSQVKADDMI 428

Query: 486 LINFFDGQANAIVINKA 502
            +   DG     V +  
Sbjct: 429 KLKVSDGSIECKVTDIE 445


>gi|15677228|ref|NP_274381.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis
           MC58]
 gi|14194727|sp|Q9JYZ2|EX7L_NEIMB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|7226608|gb|AAF41737.1| exodeoxyribonuclease, large subunit [Neisseria meningitidis MC58]
 gi|316984170|gb|EFV63148.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           H44/76]
 gi|325140417|gb|EGC62938.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           CU385]
 gi|325144502|gb|EGC66801.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M01-240013]
 gi|325200016|gb|ADY95471.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           H44/76]
          Length = 451

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  VRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI + ++P++S +GHETD
Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      +K      ++      
Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                K  I    T +     ++     
Sbjct: 356 ------------------------------------CKKNIDRFQTALSHAFHQL----- 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|330985025|gb|EGH83128.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 459

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|320539282|ref|ZP_08038952.1| exonuclease VII, large subunit [Serratia symbiotica str. Tucson]
 gi|320030674|gb|EFW12683.1| exonuclease VII, large subunit [Serratia symbiotica str. Tucson]
          Length = 466

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/512 (26%), Positives = 230/512 (44%), Gaps = 62/512 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +      ++VS L+  ++ ++E  +  + +  EIS +    +SGH YF+LKD+
Sbjct: 1   MSLAPPPS-----IFTVSRLNQAVRQLLEMEMGQIWISAEISNF-SQPTSGHWYFTLKDD 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++ +  +  F P+ G + LV   IT +     YQ+I ES+ P+G+G L    
Sbjct: 55  CAQVRCAMFRNSNRRTTFRPQNGQQVLVRASITLYELRGDYQLIAESMQPAGNGLLQQQF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++ K+ L +EGLF  Q K P+P   K + VITS +GA + DILQ +  R P L +II+P 
Sbjct: 115 DQLKQHLSDEGLFDPQFKQPLPSPAKCVGVITSASGAALHDILQVLQRRDPSLPIIIYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG++ P ++  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 175 SVQGEDAPMQMVRAIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI+SA+GHETD T+ D+ ADLRAPTP+ AAE+    +  L   L + + RL       
Sbjct: 229 QIPIVSAVGHETDVTIVDFVADLRAPTPSAAAELVSRNQLELVRQLQSQQQRLEMATDYY 288

Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +      +   L   +    L+     L +L R LE   +  +    +       ++
Sbjct: 289 LVRRQQQFTRIHHRLQQQHPHLRLARLLTLLFKLQRRLEEGTQNQLRMASQRNERAQQQL 348

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                 + I + +Q + +++  ++Q                                   
Sbjct: 349 AQIQPQNRIHRYQQRVQQQEYRLQQ----------------------------------- 373

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                        L  ++ +      +    L++ +   TL RGY+  Q      +   +
Sbjct: 374 ------------ALDRQLNAYRQRFGMACSQLEAVSPLATLARGYSVTQTPCGELLKSTK 421

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPT 509
                 R+     DG   + V +    K +  
Sbjct: 422 QAQLGERLETRLLDGWIESEVKSITTAKTRDP 453


>gi|238758842|ref|ZP_04620015.1| Exodeoxyribonuclease 7 large subunit [Yersinia aldovae ATCC 35236]
 gi|238702950|gb|EEP95494.1| Exodeoxyribonuclease 7 large subunit [Yersinia aldovae ATCC 35236]
          Length = 459

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 141/512 (27%), Positives = 229/512 (44%), Gaps = 57/512 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD+ +++  
Sbjct: 2   SQSSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    ++ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF  +HK  +P   + + VITS +GA + D+LQ +  R P L VII+P  VQG +
Sbjct: 121 LATEGLFDQRHKQLLPSPARQVGVITSASGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APMQIIRAIQLANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRKIQGQQQRMEMAMDYYLAQRSQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R LE + +  I +  R    +  R+      
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRQLSRRTERLQQRLAQVQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYSQQVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                     ++        I    L++ +   TL RGY+  Q      +   + + T  
Sbjct: 374 ------AFERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGVVLKTTKQVQTGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515
           ++     DG   + +      K+   +K    
Sbjct: 428 KLTTRLQDGWVESEITQIDVAKKSRQRKAAKQ 459


>gi|119897758|ref|YP_932971.1| exodeoxyribonuclease VII [Azoarcus sp. BH72]
 gi|119670171|emb|CAL94084.1| Exodeoxyribonuclease VII [Azoarcus sp. BH72]
          Length = 459

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 137/506 (27%), Positives = 226/506 (44%), Gaps = 54/506 (10%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +P +   SL     +VS L+   + ++ES +  + V GEIS      +SGH YF+LKD  
Sbjct: 7   SPEASPLSLSAQVLTVSALNRLAREVLESAIPLLWVSGEISNLT-RAASGHLYFTLKDEQ 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +W+     + F PE G+       +T +     YQ+ +E+L P+G G L  A  
Sbjct: 66  AQVRCAMWRNRAQLLPFRPENGMRVEARALVTVYEVRGDYQLGVEALRPAGIGNLFEAFT 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K+KL  EGLF    K P+P  P+ I ++TSP  A +RD+L  +  R P L V+++P  
Sbjct: 126 RLKEKLAAEGLFDTAVKRPLPPYPRGIGIVTSPAAAALRDVLVTLKRRAPQLPVVLYPAP 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG + P      +  L            D+++L RGGGSIEDL  FNDE + RAI  S 
Sbjct: 186 VQGADAPLR---LVAALEAAAARAAEDGIDLVLLVRGGGSIEDLQAFNDEGLARAIRRSP 242

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++  +GHETD+T+AD+AADLRAPTPTGAAE+A       +  ++ L+  L   + R +
Sbjct: 243 LPVVCGVGHETDFTIADFAADLRAPTPTGAAELASAGFHAARDRVLALDQHLARAMQRRL 302

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L+     L +  Q L+ +R +L  L R L       + R       +  R++  
Sbjct: 303 DTLAQLLDRAALRLVHPRQRLAAARVQLATLERRLHDAGTRQLQRTDERLARLGLRLRGR 362

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               ++ + R    +    + + +   ++   L                           
Sbjct: 363 RP--DLARARADQHQLAARLRRGLDTVMQRHRL--------------------------- 393

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +      L+  A    L RGY+  +D + + +   +++ 
Sbjct: 394 --------------------RLEALQDHLKHLAPDAVLARGYSITRDAHGHILRSVQDIG 433

Query: 481 TKTRILINFFDGQANAIVINKAPPKE 506
               + +   DG+ +A V    PP+ 
Sbjct: 434 VGDAVSVQLADGRLDAEVTATQPPRP 459


>gi|251796320|ref|YP_003011051.1| exodeoxyribonuclease VII large subunit [Paenibacillus sp. JDR-2]
 gi|247543946|gb|ACT00965.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. JDR-2]
          Length = 457

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/491 (30%), Positives = 238/491 (48%), Gaps = 60/491 (12%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YS+ +++ +++  +ES+  LS V +RGEIS +   HSSGH YF+LKD  SR+  I++  
Sbjct: 7   IYSIKDINRYIRMKLESDVLLSDVWLRGEISNFTH-HSSGHMYFTLKDKDSRLKCIMFAS 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F+P EG + +  G ++ +     YQ  + ++ P G G+L  A E+ K KL  EG
Sbjct: 66  HNQRLPFIPREGTKVMARGNVSVYERDGNYQFYVTAMQPDGIGSLYLAYEQLKSKLETEG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF++  K PIP  P+ I VITSPTGA +RDI+  +  R P + + +FPV VQG +    I
Sbjct: 126 LFAESRKRPIPRFPRAIGVITSPTGAAVRDIITTLQRRHPSIPIYVFPVLVQGTQAAPSI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N   E       D++I+ RGGGS+E+LW FN+E + R+IA S IP+ISA+GHE
Sbjct: 186 VKAIESMNRFGE------VDVLIVGRGGGSLEELWAFNEEPVARSIAASQIPVISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRA TPT AAE+AVP    LQ  L     RL   +  +++ +   L  +
Sbjct: 240 TDFTIADFVADLRAATPTAAAELAVPHIAELQQQLARQRQRLEQSLRMMVQGRKEQLQRV 299

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +     +  + L     RLDRL   L+H    +  R       + +++           
Sbjct: 300 RRSPFFVHPRKYLLDQAQRLDRLQERLQHRTLRLTERGKAKLERLQSQLAGHHPGEQAAF 359

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             + +    + +EQ +              ++ L   R Q ++ I               
Sbjct: 360 AAKRLQGDVKRLEQAM--------------VSSLKERRLQLQSAI--------------- 390

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487
                             R L + +    + RGY+ + D      I    ++     + +
Sbjct: 391 ------------------RQLDALSPLKVMARGYSLVYDEQEKRLIKSIADVQPGDLVRV 432

Query: 488 NFFDGQANAIV 498
              DGQ +  V
Sbjct: 433 KVADGQLDCHV 443


>gi|322418641|ref|YP_004197864.1| exodeoxyribonuclease VII large subunit [Geobacter sp. M18]
 gi|320125028|gb|ADW12588.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. M18]
          Length = 458

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 153/515 (29%), Positives = 248/515 (48%), Gaps = 61/515 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F ++        +VS L+  ++ ++E N   V V GEIS      +SGH YF+LKD 
Sbjct: 1   MQLFKERR-----VLTVSALTALVRGLLEENFDQVWVEGEISNI-ACPTSGHCYFTLKDP 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I  ++++G    ++F P +G+  ++ G++T F    +YQ+ ++++ P G G L  A 
Sbjct: 55  GAQIRCVMFRGAFRTLKFTPRDGMRVILRGRMTLFEPRGEYQLSVDTMEPQGIGGLQLAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K++L +EGLFS+ HK  IP +P+ I V+TSPTGA IRDIL  +S RF  + ++I PV
Sbjct: 115 IQLKERLAKEGLFSEAHKREIPKLPRRIGVVTSPTGAAIRDILTVLSRRFANVELLIAPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+   +EIA AI  LN           D++I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 175 RVQGEGAAREIAAAIADLNRF------GNVDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           SIP+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V  K+ L + L  L  RL    +R 
Sbjct: 229 SIPVISAVGHEVDFTIADFVADLRAATPSAAAELVVRSKKELTAELEALTHRLEVSQLRR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     + +  +A+ +  + L     R+D L   L     +I+         +  R+  
Sbjct: 289 LERSRALVTAFGRAITDPSRILGHLAQRVDSLDARLVREAGLILDDASERIVTLSARLAR 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +++  + +      ++                                      
Sbjct: 349 QSPALTLRQTAERLSTLSLRVD-------------------------------------- 370

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRN 478
                      ++ ++     SV   T  L + +   TL RGY+  +       IT  R 
Sbjct: 371 ---------HAMTRRLACAAESVWRATGTLNAVSPLATLSRGYSIARKLPGRSVITSSRQ 421

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           +A   R+ ++   G A   V       E  T   +
Sbjct: 422 IAPGDRLELSLAAGSALCTVDETRAESESLTAPER 456


>gi|299537765|ref|ZP_07051054.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus fusiformis
           ZC1]
 gi|298726744|gb|EFI67330.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus fusiformis
           ZC1]
          Length = 452

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 148/502 (29%), Positives = 242/502 (48%), Gaps = 60/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V  L+ ++K   +   +L  V V+GE+S  + IH SGH YF+LKD+ +RI A 
Sbjct: 2   SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K+ F P+EG++  + G +  + G   YQ+ ++ + P G G+L  A  + K++L
Sbjct: 61  MFKTAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF  + K PIP  P+ I V+TS TGA IRDI   +  R+PL  ++I+P  VQG + 
Sbjct: 121 QKEGLFKPEWKQPIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I + N           D++I+ RGGGSIEDLW FN+E++ RAI  S IPIISA
Sbjct: 181 APNIVQNIQRANQ------EGSCDVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADY ADLRAPTPT AAEMAVP +  L   ++  +++L+ ++   +  +   
Sbjct: 235 VGHETDTTIADYVADLRAPTPTAAAEMAVPDQADLYQRVLTQKSQLHQMVRSQLMAERQR 294

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN L +   L   ++       RL +L   L+  +++ + +K      + + ++      
Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQLESGLQAAMQMSLMKKATQLQQLHSTVEQHSPKK 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +  +++ +  + Q + +    +                                     
Sbjct: 355 ALAFHQRELEARIQQLSRATTYY------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +         T R L++    + L RG+T     +   I     +  + +
Sbjct: 378 ----------VAKQQQQFESTVRTLEALNPLSILTRGFTVAY-KDQQMIKSSTEVQKQDQ 426

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F DG+  A V N  P  E
Sbjct: 427 LTLTFHDGKVVAKVTNILPKNE 448


>gi|94501110|ref|ZP_01307633.1| exodeoxyribonuclease VII, large subunit [Oceanobacter sp. RED65]
 gi|94426686|gb|EAT11671.1| exodeoxyribonuclease VII, large subunit [Oceanobacter sp. RED65]
          Length = 446

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/493 (27%), Positives = 226/493 (45%), Gaps = 55/493 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +      +VS+L+   K ++E+ L +V V GEIS       SGH YFSLKD  +++   +
Sbjct: 3   ATQTQPITVSQLNRQSKELLETYLHNVVVTGEISNL-ARPRSGHWYFSLKDERAQVRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K     + F P+EG + ++   ++ +     YQ+I+  +  +G G L  A +  KK L 
Sbjct: 62  FKNRTQFVNFAPKEGDQVIIYASVSLYEARGDYQLIVNKMESAGEGALRAAFDALKKHLF 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            +GLF+ ++K  +P  P+ + VITSPTGA IRD+L  +  R P L V I+P +VQG +  
Sbjct: 122 TQGLFNQEYKQALPKHPQHLGVITSPTGAAIRDVLSVLKRRMPSLPVSIYPTQVQGQQAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I  AI + N  ++       D+IIL RGGGS+EDLW FN+E +  AI +S IPIISA+
Sbjct: 182 AQIVAAIERANRDQQ------CDVIILTRGGGSLEDLWPFNEEAVAWAIFHSRIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D +++D+ AD+RA TP+ AAEM    +        N E  L       I++    +
Sbjct: 236 GHEVDVSISDFVADVRAATPSAAAEMVSMDRFEWLGRFENAERALLRAWSNRIQHWQFRV 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L K + +  + L  +  RLD     L   +E  + R+     H+++R         ++
Sbjct: 296 EQLSKRIRHPREKLQENMQRLDMASMRLNTIMEKQLQREQTRVAHLVHRFYQVQPQRQLE 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +  + +  + ++  +K                                  + +   R 
Sbjct: 356 RQKLQLQQLNKRLQLAMK--------------------------------QELNQFKHR- 382

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                         +     +L + +  +TL RGY  +   +   I   + +     I  
Sbjct: 383 --------------LQNQAEVLNAVSPLSTLGRGYAILTTESGEAIRSSKQVTAGDTIHG 428

Query: 488 NFFDGQANAIVIN 500
               G   A ++N
Sbjct: 429 RLHQGSITATILN 441


>gi|71735259|ref|YP_273589.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|123761312|sp|Q48LY3|EX7L_PSE14 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|71555812|gb|AAZ35023.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 459

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 137/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  L+    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLEREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARRLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|197117643|ref|YP_002138070.1| exodeoxyribonuclease VII large subunit [Geobacter bemidjiensis Bem]
 gi|226736762|sp|B5EI10|EX7L_GEOBB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|197087003|gb|ACH38274.1| exodeoxyribonuclease VII, large subunit [Geobacter bemidjiensis
           Bem]
          Length = 458

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 153/515 (29%), Positives = 249/515 (48%), Gaps = 61/515 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F ++        +VS L+  ++ ++E N   V V GEIS       SGH YF+LKD 
Sbjct: 1   MQLFKERR-----VLTVSALTALVRGLLEENFEQVWVEGEISNL-ACPQSGHCYFTLKDV 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I  ++++G    ++F P +G+  L  G++T F    +YQ++ + L P G G L  A 
Sbjct: 55  GAQIRCVMFRGAFRSLKFTPRDGMRILTRGRLTLFEPRGEYQLVADYLEPQGIGGLQMAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K+KL +EGLFS+ HK  IP +P+ I V+TSPTGA IRDIL  ++ RF  + ++I PV
Sbjct: 115 IQLKEKLAKEGLFSELHKREIPKLPRRIGVVTSPTGAAIRDILTVLNRRFTNVELLISPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQGD   +EIA+AI  LN           D++I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 175 RVQGDGAAREIADAIDDLNR------VGNLDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V  K+ L + +  L  RL+    R 
Sbjct: 229 KVPVISAVGHEIDFTIADFVADLRAATPSAAAEIVVASKKELTAEVEALTHRLHVSQQRR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++     + +L +A+ +  + L     R+D L   L     +I+         +  R+  
Sbjct: 289 LERSRALVTALSRAITDPSRFLGHLAQRVDSLDARLTREAGLILDDASERIVTLTARLSR 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +++  + +      ++                                      
Sbjct: 349 QTPALTLKRWEERLATLSLRLD-------------------------------------- 370

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478
                      ++ ++     S+ + T  L + +   TL RGY+  +     + +T  R 
Sbjct: 371 ---------HAMTRRLAVAAESIGLATGTLNAVSPLATLSRGYSITRKLPARSVVTSSRQ 421

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           LA   R+ ++F  G A   V       +  T   +
Sbjct: 422 LAPGDRVEVSFAAGSALCTVEQAHKDSDSLTAPPR 456


>gi|255065567|ref|ZP_05317422.1| exodeoxyribonuclease VII, large subunit [Neisseria sicca ATCC
           29256]
 gi|255050392|gb|EET45856.1| exodeoxyribonuclease VII, large subunit [Neisseria sicca ATCC
           29256]
          Length = 449

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG F+ + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P 
Sbjct: 115 ERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 AVQGAGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  L+ L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDVSQKLDWLARQIRHPRQKLGEQRTYIRKLAQTLSYSMTQNVRAHTARFERQTQALKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                ++ +            +  +    R +   ++                       
Sbjct: 349 CRPDISVYRQDI------NRFQTTLSHVFRQLLAHRR----------------------- 379

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                S++  T +L++ + +  L+RG++ +++T    I     L
Sbjct: 380 --------------------QSLTAQTALLEAVSPQQILERGFSVVKNTRGQVIRNADVL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F DG+ +  V  +   +E
Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQRE 446


>gi|238921025|ref|YP_002934540.1| exodeoxyribonuclease VII large subunit [Edwardsiella ictaluri
           93-146]
 gi|259646289|sp|C5BER7|EX7L_EDWI9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|238870594|gb|ACR70305.1| exodeoxyribonuclease VII, large subunit, putative [Edwardsiella
           ictaluri 93-146]
          Length = 460

 Score =  354 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 139/503 (27%), Positives = 229/503 (45%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS      +SGH YF+LKD+ +++   +++ + 
Sbjct: 9   IFTVSRLNQTVRQLLELEMGQIWLSAEISNL-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    E  K++L  EGLF
Sbjct: 68  RRVTFRPQNGQQVLVRASITLYESRGDYQLIAESMQPAGDGLLQQQFEALKQRLQAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK P+P   + + VITS +GA + D+L  +  R P L V+I+P  VQG E P ++  
Sbjct: 128 DVGHKQPLPSPARCVGVITSTSGAALHDVLHVLRRRDPALPVVIYPSAVQGGEAPGQLVR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD
Sbjct: 188 AIALANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASHIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++AD+ ADLRAPTP+ AAE+    ++ L   L++   RL+  +   +  +   L  L  
Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLDMALDYTLARRRQRLQQLRH 301

Query: 313 ALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R   RL  L R LE  ++  +    R +     R++     H +++ +
Sbjct: 302 RLEQQHPQLRLARQQARLLSLHRRLEEAIDTQLRLAERRWRLGGERLQQRSPAHALRQQQ 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            H+ +    +E                                                 
Sbjct: 362 YHLQQLSHRLE-----------------------------------------------SQ 374

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L   + +           L+  +   TL RG++  Q  +   +  +  +A    +     
Sbjct: 375 LQRSVAARRERFGALCSRLEGMSPLATLARGFSVTQRDDGQLLRHREQVAPGDTLRTRLE 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513
           DG   + V    P   +  +  +
Sbjct: 435 DGWVESQVTATRPLTARRPRGTK 457


>gi|308069600|ref|YP_003871205.1| exodeoxyribonuclease VII large subunit (exonuclease VII large
           subunit) [Paenibacillus polymyxa E681]
 gi|305858879|gb|ADM70667.1| Probable exodeoxyribonuclease VII large subunit (Exonuclease VII
           large subunit) [Paenibacillus polymyxa E681]
          Length = 454

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 148/495 (29%), Positives = 233/495 (47%), Gaps = 60/495 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +   YS+ +L+ +++  +ES+  LS V +RGEIS +   HSSGH YF+LKD  SRI +I
Sbjct: 2   AEQRIYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRSI 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     ++ F+P+EG   +  G ++ +    +YQ     + P G G+L  A E+ K+KL
Sbjct: 61  MFATHNQRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGIGSLYLAYEQLKQKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF    K  +P  P  I VITSPTGA +RDI+  +  R+P   ++++PV VQG   
Sbjct: 121 DAEGLFDTARKRNLPAHPATIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKGA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI  +N ++E        ++I+ RGGGS+E+LW FN+E + RAI  S IP+ISA
Sbjct: 181 APSIIKAIEAMNRMQE------VQVMIVGRGGGSLEELWAFNEEAVARAIYASVIPVISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRA TPT AAE+AVP +  L+  L+  E RL N + + ++     
Sbjct: 235 VGHETDFTIADFVADLRAATPTAAAELAVPNQAELRDQLLQREQRLRNALRQRLETSRER 294

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L +   L +  + +     R+D L + L                 +   ++      
Sbjct: 295 LARLQRSPVLLHPRRYMLQHAERMDMLHQRLIRAAGNRSHLNAEKNARMRQVLERFNPRE 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  R+     Q+ +E                                           
Sbjct: 355 QIRSARKQTDMAQRQLESA----------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKT 483
                 +    K+    +    R L + +    + RGY+ + D      I   +++    
Sbjct: 374 ------MRAITKTGRQQLHTGIRQLDALSPLKVMARGYSLVYDEQEKRLIKSLKDVQPGD 427

Query: 484 RILINFFDGQANAIV 498
            I I   DGQ +  V
Sbjct: 428 SIKIKVSDGQLDCQV 442


>gi|302185734|ref|ZP_07262407.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           syringae 642]
          Length = 459

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L   +E  + ++     H+ +R+ + 
Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAVEQNMHQRQVRLAHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L+  +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQVQTLKVVSPLATLGRGYSIMLDERGHAIRNAAQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTARLGEGELQVRVED 447


>gi|297568698|ref|YP_003690042.1| exodeoxyribonuclease VII, large subunit [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924613|gb|ADH85423.1| exodeoxyribonuclease VII, large subunit [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 446

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 55/498 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           +N  D+   +VSEL+  ++ ++E++ S V V GEIS  R   SSGH YF+LKD  +++ A
Sbjct: 2   ENPFDNRIQTVSELTRSIRGLLETSYSMVTVTGEISNLR-RPSSGHLYFTLKDADAQLRA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++     +   P +G+E L  G+I+ +    +YQ+II+ +   G+G L  A ++ K K
Sbjct: 61  VLFRAQQRYLACTPADGLEVLCRGRISVYEPRGEYQLIIDFMDGKGAGLLRIAFDRLKAK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDE 185
           L  EGLF+ + K P+PF+PK IA++TSP GA +RD L + + R P   + I PV+VQGD 
Sbjct: 121 LEAEGLFAPERKRPLPFLPKSIALVTSPQGAAVRDFLTQAAKRCPATAISIMPVRVQGDG 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              EIA AI +LN L       R D+I+L RGGGS+EDLW FN+E + RA+A S IP++S
Sbjct: 181 AAAEIAQAIARLNQLA------RWDVIVLCRGGGSLEDLWAFNEEELARAVAASEIPVVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D+T+AD+ ADLRAPTPT AA+M +P +E L  ++     RL   + R ++    
Sbjct: 235 AVGHEVDFTIADFVADLRAPTPTAAAQMVLPDQEALAGAINEFNRRLAATLRRQLQEARQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +  + L +  + L+    RLD L  EL H L   + R     N     ++       
Sbjct: 295 KLLAGQRLLGDPSRLLAQHHLRLDHLQAELGHGLRYHLHRCQERLNRFQAILQQRDPRRE 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  +      +                                             
Sbjct: 355 LARQRDRLQAGVMRL--------------------------------------------- 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
              F ++  +      +     IL + +    L RGY   + T+   +   R       +
Sbjct: 370 --NFTINSIMVEKRNHLGRNAAILDAVSPLAVLGRGYAIARRTDGTVLRSARQAEIDEEL 427

Query: 486 LINFFDGQANAIVINKAP 503
            +   DGQ +  V    P
Sbjct: 428 SLILHDGQLSCNVKQIKP 445


>gi|221314677|ref|ZP_03596482.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|255767540|ref|NP_390310.2| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|251757275|sp|P54521|EX7L_BACSU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|225185168|emb|CAB14361.2| exodeoxyribonuclease VII (large subunit) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 448

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LKD ++R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I       E       D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  + R+ I   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 433 DGVLTCEVLEKRGEEK 448


>gi|118602733|ref|YP_903948.1| exodeoxyribonuclease VII, large subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|166232364|sp|A1AX20|EX7L_RUTMC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|118567672|gb|ABL02477.1| exodeoxyribonuclease VII, large subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 466

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 33/490 (6%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y++S   +     +E  +    ++GEIS       SGH YFSLKD+ +++  ++++   
Sbjct: 7   IYTISNFLFLCNKTIEDKIPTCWLQGEISNLT-RPESGHWYFSLKDSKAQVYCVLFRFNQ 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             I+F P+ G+E LV    T +     +Q+II+ L P G G L  A E+ K KL+ EGLF
Sbjct: 66  RHIKFNPKNGMEVLVHVTPTLYKARGNFQLIIQHLEPVGIGNLNLAFEQLKNKLVNEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIAN 192
            + HK P+P I   I VI+S TGAVI+DI++ ++ R+P   +++F   VQG    K++  
Sbjct: 126 DNIHKKPLPNIINTIGVISSSTGAVIQDIIKVLNNRYPFSDILLFDSMVQGQGSVKKL-- 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                N L       + D+II+ARGGGS+EDLW FN+E + RAI  +S PIISAIGHETD
Sbjct: 184 ----TNALNAADQSGKCDVIIIARGGGSLEDLWAFNEETLARAIFKASTPIISAIGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++D+  D+ APTP+ AA +  P +  L ++   L  RL+    + +    + LN L  
Sbjct: 240 TTISDFVCDICAPTPSAAAMLVTPDRLELLANTDKLYMRLHQSYQQTLHDYQSVLNQLKL 299

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            +P S++ ++    +LD +   L ++++  +       N I + +K    I  I+  +  
Sbjct: 300 RIPISNKQIAFFSQKLDHVSINLNNHVKSTLVLNNAKLNSIFSALKQHSPIEAIKHIKIL 359

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                  +                         + Q K  I   ++ +     +++  ++
Sbjct: 360 NQVSFAQL-------------------------KHQIKQIININNSALYLANEKLKKAIA 394

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                  T++SI    L   +  NTL RG++   +  N  ++   ++     I     DG
Sbjct: 395 TLTDKHKTTLSIQANSLHHLSPLNTLSRGFSITTNAKNQILSSITDIKINQAITTQLADG 454

Query: 493 QANAIVINKA 502
           +  + +    
Sbjct: 455 KLYSNIKKIE 464


>gi|291484872|dbj|BAI85947.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           natto BEST195]
          Length = 460

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LKD ++R+ ++++    
Sbjct: 20  TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 78

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 79  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 138

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 139 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 198

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I       E       D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 199 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 252

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  K   + +L  
Sbjct: 253 FTISDFVADIRAATPTGAAEIAVPHTTDLIERAKTAEVRMTRAMQQHLGQKKERIQTLQS 312

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 313 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 372

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 373 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 393

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  + R+ +   
Sbjct: 394 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEVKLK 444

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 445 DGVLTCEVLEKRGEEK 460


>gi|239997021|ref|ZP_04717545.1| exonuclease VII, large subunit [Alteromonas macleodii ATCC 27126]
          Length = 454

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 130/502 (25%), Positives = 222/502 (44%), Gaps = 58/502 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F+   S      +V++L+   + ++E  +  + +  EIS +    +SGH YF+LKDN ++
Sbjct: 6   FTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A ++KG+   +   P+EG + LV   +  +     YQ+++E +   G G L  A E  
Sbjct: 65  VRAAMFKGSNRNVRIRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLF   +K  +P     I VITS +GA + D+L  +  R P   +I++P  VQ
Sbjct: 125 KFKLNNEGLFDTANKRALPERINRIGVITSSSGAALHDVLSVLKRRSPQTEIIVYPSMVQ 184

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+  P ++ NA+   N   E       D+++L RGGGS+EDLW FNDE + R +A S++P
Sbjct: 185 GETAPLQLINALRTANHRAE------VDVLLLTRGGGSLEDLWCFNDESLAREVAASALP 238

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D+T++D+ AD+RAPTP+ AAE+       L  +L   + RL   I + ++ 
Sbjct: 239 IVSAVGHEVDFTISDFVADVRAPTPSAAAEILSQDSAALYQTLSQQKQRLARAIHQYLQT 298

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               L    + L   +    +      LDRL   L H ++  + +  +    +  R+   
Sbjct: 299 SKQQLVLKKQRLNALHPQSRIQSQWQTLDRLQLRLAHKMQNDLAKAEKRLQGLDYRLNKQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N+ + +  +      +   +   +R                               
Sbjct: 359 SPSANVARAKDKLNYASTKLLSSMNTLIRS------------------------------ 388

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +     +LQS +  +TL RGY+    ++   I     + 
Sbjct: 389 -----------------KKNELGGKVSLLQSVSPLSTLARGYSITL-SDKAAINSVNKVN 430

Query: 481 TKTRILINFFDGQANAIVINKA 502
               I     DG+  + V +  
Sbjct: 431 VGDEIKSRVTDGEITSTVTHIQ 452


>gi|196248857|ref|ZP_03147557.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. G11MC16]
 gi|196211733|gb|EDY06492.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. G11MC16]
          Length = 448

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 147/498 (29%), Positives = 241/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V  L+ ++K    V+ +L  + ++GEIS ++  HS GH YF+LKD+ +RI A+
Sbjct: 1   MEVKYVTVGALTKYIKRKFDVDPHLRDLWIKGEISNFK-QHSRGHMYFTLKDSEARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F PE+G+  LV G+I+ +  +  YQ+ ++ + P G G L  A E+ K++L
Sbjct: 60  MFAGYNQHLPFRPEDGMNVLVRGEISVYEPNGNYQLYVKEMQPEGIGRLYLAYEQLKQRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS  HK P+P  P+ + V+TSPTGA +RDI+  I  R+PL +VI+FP  VQG+  
Sbjct: 120 EAEGLFSSAHKKPLPAFPRCVGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI + N   E       D++I+ RGGGSIE+LW FN+E++ RAI  S +P+ISA
Sbjct: 180 APSIVRAIERANDFSE------VDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPVISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    L   +   + RL   +   +      
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPHIGELAERIAERKWRLIRAMKERLAANQER 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L  +       +       +LD L   L    E ++ +K +    +  R+       
Sbjct: 294 LARLQASYAFRYPKRLYEQKEQQLDALLERLARQRERLVDKKRQRLRELHLRLWRHHPEA 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++ ++        +E+ +                                        
Sbjct: 354 ELERMKERQKATAVALEKAM---------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 L        + V      L++ +    ++RGY+ + +  +  + +   L    R
Sbjct: 374 ---RTALERHAFRFRSHV----ARLEALSPLRIMERGYSLVYNERHELVKRIGQLQVGER 426

Query: 485 ILINFFDGQANAIVINKA 502
           + I   DGQ +  V+   
Sbjct: 427 LSIRVQDGQVDCQVMGVE 444


>gi|238794823|ref|ZP_04638424.1| Exodeoxyribonuclease 7 large subunit [Yersinia intermedia ATCC
           29909]
 gi|238725836|gb|EEQ17389.1| Exodeoxyribonuclease 7 large subunit [Yersinia intermedia ATCC
           29909]
          Length = 459

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 143/512 (27%), Positives = 228/512 (44%), Gaps = 57/512 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S     ++VS L+  ++ ++E  +  + +  EIS +    SSGH YF+LKD  +++  
Sbjct: 2   SQSSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDAQAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++ T  +  F P+ G + LV   IT +     YQ+I ES+ P+G G L    ++ K++
Sbjct: 61  AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   + + VITS +GA + D+LQ +  R P L VII+P  VQG +
Sbjct: 121 LAAEGLFDQHHKQPLPSPARQVGVITSASGAALHDVLQVLQRRDPSLPVIIYPTAVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       DI+I+ RGGGS+EDLW FNDE + RAI NS IPI+S
Sbjct: 181 APLQIVRAIQLANLRAE------CDILIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +  +  
Sbjct: 235 AVGHETDITIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
               L   L      L  +R +    +L R LE + +  I    R    +  R+      
Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEESAQNQIRGLSRRTERLQQRLAQVQPQ 354

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  Q + +++  + Q                                         
Sbjct: 355 GQIHRYSQQVQQQEYRLRQ----------------------------------------- 373

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  L  ++        I    L++ +   TL RGY+  Q +    +   + +    
Sbjct: 374 ------ALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTSAGVVLKTTKQIQAGD 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515
           ++     DG   + +      K+   +K    
Sbjct: 428 KLTTRLQDGWVESEITQINVAKKARQRKAAKE 459


>gi|321311914|ref|YP_004204201.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis BSn5]
 gi|320018188|gb|ADV93174.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis BSn5]
          Length = 448

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LKD ++R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I       E       D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  + R+ +   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEVKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 433 DGVLTCEVLEKRGEEK 448


>gi|330807657|ref|YP_004352119.1| exodeoxyribonuclease VII, large subunit [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375765|gb|AEA67115.1| putative exodeoxyribonuclease VII, large subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 459

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 137/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S++ V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQIALTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREATAQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDAGDLVRRVESLHRRLVMRMRDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L  L + L +  + L     RLD L   +    E  +  +      +  R+   
Sbjct: 295 MRDQLRLEGLTRRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAGQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +                                   +
Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------REGL 382

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K    ++   +                 L   +   TL RGY+ + D     I       
Sbjct: 383 KNRRVQLHNQMQT---------------LHIVSPLATLGRGYSILLDERGQAIRSAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLTAKLGEGELLVRVED 447


>gi|296314167|ref|ZP_06864108.1| exodeoxyribonuclease VII, large subunit [Neisseria polysaccharea
           ATCC 43768]
 gi|296839169|gb|EFH23107.1| exodeoxyribonuclease VII, large subunit [Neisseria polysaccharea
           ATCC 43768]
          Length = 469

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 230/490 (46%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K ++E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 27  VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             +    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 86  AHLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSELQIAQ 205

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S IGHETD
Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGIGHETD 259

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+  D+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 260 FTLADFVVDMRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++              
Sbjct: 320 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRP---------- 369

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                   I     +I +  T +    S
Sbjct: 370 ---------------------------------------DISVCKKNIDRFQTALPAAFS 390

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +     S++    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 391 QLLARRRQSLAAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 451 ETDVRVSKEQ 460


>gi|226311925|ref|YP_002771819.1| exodeoxyribonuclease VII large subunit [Brevibacillus brevis NBRC
           100599]
 gi|254783691|sp|C0ZC06|EX7L_BREBN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226094873|dbj|BAH43315.1| probable exodeoxyribonuclease VII large subunit [Brevibacillus
           brevis NBRC 100599]
          Length = 460

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 154/509 (30%), Positives = 251/509 (49%), Gaps = 60/509 (11%)

Query: 14  EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SVS+L+ ++K ++E   +L  + VRGEIS +   HSSGH YF+LKD  SRI  +++  
Sbjct: 6   ILSVSDLNRYIKLVLEKEPHLQDIWVRGEISNFTH-HSSGHMYFTLKDKQSRIKVVMFAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + FLP++G + +V G I+ +     YQ   + + P G G+L  A E+ K+KL +EG
Sbjct: 65  YNRFLRFLPKDGAKAIVRGSISAYERDGAYQFYAKEMQPDGLGSLYLAFEQLKEKLAQEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  +P  PK + V+TSPTGA IRDI   I  R+P   +++ P  VQG + P  I
Sbjct: 125 LFAAERKRMLPRFPKRVGVVTSPTGAAIRDICTTIRRRYPQAEIVLSPAVVQGADAPASI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +AI  +N        P  D++I+ RGGGSIE+LW FNDE + RAIA S IP+ISA+GHE
Sbjct: 185 VSAIRIMN------DQPDIDVLIVGRGGGSIEELWAFNDENVARAIATSLIPVISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS- 309
           TD T+AD+ AD+RA TPT AAE+AVP        +  LE R++  +   +  + N L   
Sbjct: 239 TDVTIADFVADVRAATPTAAAELAVPHYLEWVERVRQLEIRMHRAVRGTMTEQRNRLTRL 298

Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               A+   ++ L  +  RLDR    +  +++ ++ R+   +  +  +IK   L   I +
Sbjct: 299 GNSYAMRQPERRLEEAAERLDRAHLRMRQSMKHLLDRRRERYTRLDEQIKRYRLADQIGE 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+++ + +  +++ +   L    +    +IA L                          
Sbjct: 359 KRKNLSKLRATLDERMLGRLNQKRMAFAARIATL-------------------------- 392

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                                ++ +    ++RG++ +   N+  +      A    I++ 
Sbjct: 393 ---------------------EALSPLKVMQRGFSLVYT-NDRLVKSVEQFAPGDEIMVR 430

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNN 517
             DG A A V      +E+ +   +    
Sbjct: 431 LSDGSATARVEKVNREEEKQSGSQKNGTR 459


>gi|307824441|ref|ZP_07654666.1| exodeoxyribonuclease VII, large subunit [Methylobacter
           tundripaludum SV96]
 gi|307734425|gb|EFO05277.1| exodeoxyribonuclease VII, large subunit [Methylobacter
           tundripaludum SV96]
          Length = 452

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/501 (29%), Positives = 236/501 (47%), Gaps = 58/501 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             S+     +V++L+     ++  +   V V GE+S      SSGH YFSLKD ++++  
Sbjct: 5   SASIRRNIITVTQLNRETSQLLAEHFLSVLVEGELSNLST-PSSGHLYFSLKDANAQVRC 63

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++    ++ F PE G + +V  +++ +     YQ+I+E +  +G G L  A +  K K
Sbjct: 64  AMFRTQQRRLAFKPENGKQVIVKAQVSLYEPRGDYQLIVEHIEEAGDGALRRAFDALKLK 123

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L E+GLF   HK  +P +P+ I VITSP+GA IRDIL  +  RF  + VI++PV VQGD 
Sbjct: 124 LSEQGLFDAAHKQTLPTLPRAIGVITSPSGAAIRDILTVLQRRFAAIPVIVYPVAVQGDN 183

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              EIA AI   N         + D+IIL RGGGS+EDLW FN+E++ RAI +S IPIIS
Sbjct: 184 AKHEIAKAIATANR------HKQCDVIILGRGGGSLEDLWAFNEELVARAIYDSEIPIIS 237

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD+T+AD+ ADLRA TP+ AAE A P ++   S  + LE+RL   + R +  K  
Sbjct: 238 AVGHETDFTIADFVADLRAATPSAAAEHASPDQQQWLSRFMYLESRLQQQLQRKLNQKQQ 297

Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           TL+ L + L   +  Q L+ +  R+  L   L   +   +            ++      
Sbjct: 298 TLDWLNQRLQQQHPGQKLAGNARRMAELEARLNQAIHAKLRHMTGIIEAKTAKLWQHNPA 357

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I+ ++Q      + +                                           
Sbjct: 358 ITIRSHKQRQDYLSKRLISA---------------------------------------- 377

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATK 482
                   +HK++  +  +  +++ L + +   TL RGY  +   ++   I     L   
Sbjct: 378 -------AAHKLEQLNQRLLNSSQTLHAVSPLATLNRGYAMVISPSSGEIIRSTEQLKPG 430

Query: 483 TRILINFFDGQANAIVINKAP 503
            R+      G+  + +    P
Sbjct: 431 DRVQTRLAQGRFTSQIKVIDP 451


>gi|308174225|ref|YP_003920930.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens
           DSM 7]
 gi|307607089|emb|CBI43460.1| exodeoxyribonuclease VII (large subunit) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 453

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 144/491 (29%), Positives = 241/491 (49%), Gaps = 60/491 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L  + ++GE+S  + IH+ GH YF+LKD H+R+ A++++   
Sbjct: 14  TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 72

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +++ F PE+G++ +V G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 73  SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 132

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D+HK  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 133 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 192

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I + N  K        D++I+ RGGGSIE+LW FN+E++ RAI  S+IP+ISA+GHETD
Sbjct: 193 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPVISAVGHETD 246

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E RL   + + I  K   + +L  
Sbjct: 247 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQALQS 306

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D L ++ +  L  +  RK R       R+ +    + +++ +
Sbjct: 307 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPENQLKQAK 366

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E+   +E+ +                                              
Sbjct: 367 KRYEERSNQLERSMNVQ------------------------------------------- 383

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +K  H+        L + +    ++RGY+     +   I     +     + +   
Sbjct: 384 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKELIKSVDQVEQNDTLEVKMT 438

Query: 491 DGQANAIVINK 501
           DG     V+ K
Sbjct: 439 DGVLTCEVLQK 449


>gi|288942410|ref|YP_003444650.1| exodeoxyribonuclease VII large subunit [Allochromatium vinosum DSM
           180]
 gi|288897782|gb|ADC63618.1| exodeoxyribonuclease VII, large subunit [Allochromatium vinosum DSM
           180]
          Length = 449

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 139/493 (28%), Positives = 220/493 (44%), Gaps = 58/493 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS L    + ++E+    + VRGEIS       SGH YFSLKD  +++   +W+    +
Sbjct: 9   SVSRLVSEARAVLETGFPRLWVRGEISNL-AQPGSGHLYFSLKDAGAQVRCALWRSKRQR 67

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F    G + L   +++ +    ++Q++IE L P G G L  A E+ K++L  EGLF  
Sbjct: 68  LAFGLANGQQVLARAQVSLYEPRGEFQLLIEHLEPDGEGALRLAFEQLKQRLAAEGLFEA 127

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K P+P  P+ + +ITSP+GA +RD++  +  RFP L V+I+P +VQG+  P+ +  A+
Sbjct: 128 ALKRPLPPFPRQVGLITSPSGAAVRDLITVLGRRFPALPVLIYPAQVQGESAPESLIAAL 187

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N   E       D++ILARGGGS+EDL  FNDE + RA+  S IP++S +GHE D T
Sbjct: 188 ELANVRAE------CDVLILARGGGSLEDLNAFNDERLARAVRASRIPVVSGVGHEIDVT 241

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD  AD RA TP+ AAE+  P   HL+  +  L  RL     R +      LN+  + L
Sbjct: 242 IADLVADQRAATPSAAAELVAPSGAHLRERVATLSNRLIAAQRRRLDAARQRLNASRRHL 301

Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
              +    L     RLDR    L   +   I    R    ++ R++     H I++ R  
Sbjct: 302 SLLHPSARLQQQAQRLDRAEWRLRTLIANRISEARRRLQPLVERLERQAPAHRIERARCQ 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ + +   +                                              
Sbjct: 362 LEALERRLHRAQYE---------------------------------------------- 375

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRILINFFD 491
             +      +      L++ +   TL RGY    +      +     +A   R+ I    
Sbjct: 376 -LLTHRRERLWRAVAGLEARSPLGTLSRGYAILTRLPEGEIVRDPAQVAPGDRLQIRVAG 434

Query: 492 GQANAIVINKAPP 504
           G+  A+    AP 
Sbjct: 435 GRIEAVARPSAPA 447


>gi|237800056|ref|ZP_04588517.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806385|ref|ZP_04593089.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022911|gb|EGI02968.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027498|gb|EGI07553.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 459

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVITVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSS 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 182 VQGREAINQIVRALKLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  +     H+ +R+ + 
Sbjct: 295 MRERLQLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHTRQVRLVHMQSRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + ++  ++   L+ +                        
Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIRDQIKARKLQLQ------------------------ 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRHASQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLTARLGEGELQVRVED 447


>gi|229543901|ref|ZP_04432960.1| exodeoxyribonuclease VII, large subunit [Bacillus coagulans 36D1]
 gi|229325040|gb|EEN90716.1| exodeoxyribonuclease VII, large subunit [Bacillus coagulans 36D1]
          Length = 446

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 149/497 (29%), Positives = 252/497 (50%), Gaps = 61/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV  L+ ++K   +++  L+ + V+GEIS ++  HSSGH YF+LKD  +R+ ++++   
Sbjct: 4   LSVHTLTKYIKRKFDADPYLNDIHVKGEISNFK-RHSSGHMYFTLKDEKARLLSVMFASA 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              ++F+PE G++ LV G ++ +     YQ+ ++S+ P G G L  A E+ K+KL +EGL
Sbjct: 63  NRTLKFMPENGMKVLVTGSVSVYEAGGSYQLYVKSMQPDGIGALYLAFEQLKEKLEKEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  Q++ PIP  PK+I VITSPTGA +RDI+  I  R+P+  +I+ P  VQG+     I 
Sbjct: 123 F--QNRRPIPAYPKVIGVITSPTGAAVRDIITTIRRRYPVAEIILHPALVQGENAAPSIV 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI Q N +       + D++I+ RGGGSIE+LW FN+E+  RAI  S+IP+ISA+GHET
Sbjct: 181 KAIEQANRI------GKADVLIVGRGGGSIEELWAFNEEITARAIFASNIPVISAVGHET 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+AADLRAPTPT AAE+AVP  + ++  +++L+ RL   +   ++Y+ + L  L 
Sbjct: 235 DFTIADFAADLRAPTPTAAAELAVPHIDDVREKILHLKTRLIRNMREKVRYEKSRLAYLE 294

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           +   L N  + +     + DRL   L      +I        ++  R+  +     + + 
Sbjct: 295 RSPVLTNPYRLIRQQIEQADRLTDRLHREAGRLIGTAEEQTRNLHGRLLRNRPEQKLLQA 354

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R++    + ++                                +  +   +++   R   
Sbjct: 355 RRNFTSLEANL--------------------------------VKQMQAVLREKQHRFAK 382

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +S                L++ +    ++RGY+     +   + +     T   I +  
Sbjct: 383 NISA---------------LEALSPLKVMERGYSLAMAEDGTILKKTSQAKTGETIRVRL 427

Query: 490 FDGQANAIVINKAPPKE 506
            DG     V      K+
Sbjct: 428 TDGGLLCTVDKIERGKK 444


>gi|325205869|gb|ADZ01322.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M04-240196]
          Length = 451

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 230/490 (46%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 VIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +         + L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKFDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                       K   R+          +L   R+                         
Sbjct: 356 ----------CKKNIDRFQTALPAAFSQLLARRRQS------------------------ 381

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    +S    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 382 ---------LSAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|327439757|dbj|BAK16122.1| exonuclease VII, large subunit [Solibacillus silvestris StLB046]
          Length = 452

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/506 (29%), Positives = 242/506 (47%), Gaps = 60/506 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
             +   SV  L+ ++K   +   +L  V V GE+S  +  HSSGH YF+LKD+ SRI+A 
Sbjct: 2   TSNSYLSVKALTKYIKRKFDADPHLRDVYVTGELSNVKV-HSSGHIYFTLKDDSSRINAT 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K+ F PEEG++  + G +  +  S  YQ+  +++ P G G L  A  + K++L
Sbjct: 61  MFRSQASKLSFKPEEGMKVFIRGDVNVYEASGAYQLYAQTMEPDGIGGLFVAFNQLKERL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+   K PIP  PK I V+T+ TGA IRDI   I+ R+P   ++I+P  VQG   
Sbjct: 121 QNEGLFNPNFKQPIPQFPKTIGVLTATTGAAIRDICTTINRRYPQAEILIYPTLVQGAGA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D++I+ RGGGSIEDLW FN+E++ RAI  S IP+ISA
Sbjct: 181 APNITENIYLANR------HGFCDVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPVISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ ADLRAPTPT AAE+AVP ++ L   +++ ++ L+ ++   + ++ N 
Sbjct: 235 VGHETDTTIADFVADLRAPTPTAAAELAVPNQQQLYQQILHYQSILHQMMTSKLNFERNR 294

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L     L   ++       RL ++   L++  ++ +  +      I +++K    +H
Sbjct: 295 LTKLQNSYPLATPERLYRPFIERLVQVDLSLQNATKLYMMNEKSKLQSIDSKMKLYSPVH 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   +Q +  + Q +   +                                        
Sbjct: 355 QLIAAKQQLEHRTQTLTNRM---------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                    ++     + +   R+L++      + +G++      N  +     L     
Sbjct: 375 -------QQQLAQNKVAFTNQLRMLEALNPLALMSKGFSVAYKEEN-VVKSVHELEKGDV 426

Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510
           I + F DG A A +  K   KE   K
Sbjct: 427 IQVTFQDGYAEAKIEKKHVQKEGEAK 452


>gi|154686694|ref|YP_001421855.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens
           FZB42]
 gi|154352545|gb|ABS74624.1| XseA [Bacillus amyloliquefaciens FZB42]
          Length = 453

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 145/491 (29%), Positives = 239/491 (48%), Gaps = 60/491 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L  + ++GE+S  + IH+ GH YF+LKD H+R+ A++++   
Sbjct: 14  TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 72

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +++ F PE+G++ +V G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 73  SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 132

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D+HK  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 133 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 192

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I + N  K        D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 193 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPIISAVGHETD 246

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E RL   + + I  K   + SL  
Sbjct: 247 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQSLQS 306

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D L ++ +  L  +  RK R       R+ +      +++ +
Sbjct: 307 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPETQLKQAK 366

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E+   + + +                                              
Sbjct: 367 KRYEERSNQLARSMNVQ------------------------------------------- 383

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +K  H+        L + +    ++RGY+     +   I     +     + +   
Sbjct: 384 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKKLIKSVDQVEQNDTLEVKMT 438

Query: 491 DGQANAIVINK 501
           DG     V+ K
Sbjct: 439 DGVLTCEVLQK 449


>gi|328554170|gb|AEB24662.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens
           TA208]
 gi|328912562|gb|AEB64158.1| exodeoxyribonuclease VII (large subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 447

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 144/491 (29%), Positives = 241/491 (49%), Gaps = 60/491 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L  + ++GE+S  + IH+ GH YF+LKD H+R+ A++++   
Sbjct: 8   TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +++ F PE+G++ +V G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D+HK  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I + N  K        D++I+ RGGGSIE+LW FN+E++ RAI  S+IP+ISA+GHETD
Sbjct: 187 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPVISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E RL   + + I  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQALQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D L ++ +  L  +  RK R       R+ +    + +++ +
Sbjct: 301 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPENQLKQAK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E+   +E+ +                                              
Sbjct: 361 KRYEERSNQLERSMNVQ------------------------------------------- 377

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +K  H+        L + +    ++RGY+     +   I     +     + +   
Sbjct: 378 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKELIKSVDQVEQNDTLEVKMT 432

Query: 491 DGQANAIVINK 501
           DG     V+ K
Sbjct: 433 DGVLTCEVLQK 443


>gi|77460813|ref|YP_350320.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens
           Pf0-1]
 gi|123603400|sp|Q3K7C5|EX7L_PSEPF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|77384816|gb|ABA76329.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas
           fluorescens Pf0-1]
          Length = 459

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 233/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S++ V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P +++ + P  
Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVQLTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREATAQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P   HL   + +L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSHLIRQVESLHRRLVMRMRDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L  + + L +  + L     RLD L   +    E  +  +      +  R+   
Sbjct: 295 MRDRLRLEGMTRRLRHPGERLRQQAQRLDDLDMRMRRAFERQLNTRRERLIRLETRLAGQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +                                +  +
Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------NEGL 382

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K+   +++  +                 L   +   TL RGY+ + D   N I       
Sbjct: 383 KRRRLQLQSQMQT---------------LHVVSPLATLGRGYSILLDERGNAIRNAAQTH 427

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 428 TGQRLKARLGEGELQVRVED 447


>gi|114331498|ref|YP_747720.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas eutropha C91]
 gi|122313696|sp|Q0AFX7|EX7L_NITEC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|114308512|gb|ABI59755.1| Exodeoxyribonuclease VII large subunit [Nitrosomonas eutropha C91]
          Length = 448

 Score =  351 bits (901), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 229/503 (45%), Gaps = 60/503 (11%)

Query: 4   FSQKNSLDHP---EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            +  N    P    + VSEL+ H++ I+E     + V GEIS  +    SGH YFSLKD+
Sbjct: 1   MTDNNLFPEPKKIVWRVSELNRHVRVILEQTFPLLWVSGEISNLKRYP-SGHWYFSLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           ++++  ++++     ++++P++G +      IT +    ++Q+ IE L  +G G L    
Sbjct: 60  NAQVRCVMFRHKNMYLDWMPQDGAQVEAQALITLYEARGEFQLTIERLRRAGLGVLFETF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L +EGLF+ ++K  IP  P+ I +ITS   A +RD+L  +  R P L V+I+P 
Sbjct: 120 ERLKTRLQQEGLFNPEYKQLIPPYPQQIGIITSTNTAALRDVLTTLQRRLPSLPVVIYPA 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E    I  A+       E       D++IL RGGGSIEDLW FN+E++ RAIA  
Sbjct: 180 PVQGKEAASAIVTALQIATQRSE------CDVLILCRGGGSIEDLWAFNEEIVARAIAAC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI++ IGHETD+T+AD+ AD+RAPTPTGAA++A P ++ +   L   + RL   I R 
Sbjct: 234 PIPIVTGIGHETDFTIADFVADMRAPTPTGAAQLAAPDRQDILHRLQYWQHRLQQAIERN 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           I+ ++ T + L   L +  + +      L +L   L H     +            RI+ 
Sbjct: 294 IERRMQTTDLLAHRLVHPGERIRYQLIHLSQLHNRLLHAWSRQLEVCKWRIEAFRRRIQF 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                N  K  Q   E    +++ +                                   
Sbjct: 354 TKPDINTGKRYQQ--ELAARLQRAMVY--------------------------------- 378

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                 R+E +    I+            L     K  L+RGY+         +   + +
Sbjct: 379 ------RLESLQVQLIRQQQH--------LAHLDPKAVLERGYSITYTAGGEILQDSQQI 424

Query: 480 ATKTRILINFFDGQANAIVINKA 502
            T   + I F  G A A +    
Sbjct: 425 HTGDNVQIVFAKGSAKANITETN 447


>gi|113461359|ref|YP_719428.1| exodeoxyribonuclease VII large subunit [Haemophilus somnus 129PT]
 gi|123327313|sp|Q0I3T0|EX7L_HAES1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|112823402|gb|ABI25491.1| Exodeoxyribonuclease VII large subunit [Haemophilus somnus 129PT]
          Length = 448

 Score =  351 bits (901), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 140/496 (28%), Positives = 226/496 (45%), Gaps = 57/496 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
           ++N      YSVS+L+  ++ ++E  L  V + GEIS +     SGH YFSLKD ++++ 
Sbjct: 2   EQNMGQAKIYSVSQLNQSVRQMLEGQLGVVWLTGEISNFT-QPVSGHWYFSLKDENAQVR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++    ++ F  + G++ LV   ++ +     YQ+IIES+  +G G L    E  K 
Sbjct: 61  CAMFRMKNMRVGFKAQNGMQVLVRASVSLYEPRGDYQLIIESMNLAGDGLLQRQFEALKL 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+  +K  +P   K + +ITSPTGA ++DIL  +  R P L V+I+P  VQG 
Sbjct: 121 TLAAEGLFAQHYKKNLPHFAKSVGIITSPTGAALQDILHILQRRDPSLHVVIYPTAVQGK 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI +S +PII
Sbjct: 181 EATAEIVQMIELANKRRE------VDVLIVGRGGGSLEDLWCFNEERVARAIFHSELPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY-- 302
           SA+GHETD T+AD+ AD+RAPTP+ AAE+    ++ L   L   + RL   + R  +   
Sbjct: 235 SAVGHETDVTIADFVADVRAPTPSAAAELVSRHQQELLDQLFYRKQRLEMALDRFFQQKV 294

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           K+           +    L+  +  + +L   L   L   + +K +    +  R+ +  L
Sbjct: 295 KLLQRLQFRLQQQHPQSQLNIQQKMMQQLLHRLHLALSTFVDKKQQKMTALCRRLDNSPL 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            + +QK  Q +++ +  +                                          
Sbjct: 355 PYYVQKQHQILVQLELRL------------------------------------------ 372

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   L  K K+    +S     L S +    L RGY+  ++     +     +   
Sbjct: 373 -----NSGLQKKFKNADYQLSRLCGKLDSLSPLKVLARGYSITKNQQGQALKNSHQIEVG 427

Query: 483 TRILINFFDGQANAIV 498
             I      G   + V
Sbjct: 428 QLISTQLERGIIVSRV 443


>gi|222055715|ref|YP_002538077.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. FRC-32]
 gi|259646292|sp|B9M0X3|EX7L_GEOSF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|221565004|gb|ACM20976.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. FRC-32]
          Length = 445

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 152/491 (30%), Positives = 252/491 (51%), Gaps = 56/491 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +    SVS+L+  +++++E N  HV V GE+S       SGH YF+LKD  +++  +++
Sbjct: 4   AEKNILSVSQLTGLVRNVLEDNFDHVWVEGEVSNL-ATPGSGHLYFTLKDASAQLRCVMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           + ++  ++F P +G+  +  G+++ F    +YQ+I+E L P G G L  A  + K++L +
Sbjct: 63  RASVRALKFKPSDGMGLIARGRLSVFDARGEYQLIVEYLEPKGIGALQLAFIQLKERLAK 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EGLFSD HK  IP +P+ I ++TS TGA I DIL  ++ RF  ++V++ PVKVQG+   +
Sbjct: 123 EGLFSDSHKKDIPRLPQRIGIVTSATGAAIHDILNVLNRRFANVQVLLRPVKVQGEGAAE 182

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA A+  LN           D++I+ RGGGS+EDLW FN+E++ RAI  SSIP+ISA+G
Sbjct: 183 EIAAAVNDLNR------YGSIDVMIVGRGGGSLEDLWAFNEEIVARAIYRSSIPVISAVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+T++D+ ADLRAPTP+ AAEM +  K  + + L  L  RL   + RL+      LN
Sbjct: 237 HEIDFTISDFVADLRAPTPSAAAEMVIKSKAEISAELEALFHRLGMAVRRLLNEHWGELN 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L++A+ +    L     RLD L       +  ++ R     + + +R++    +  +++
Sbjct: 297 GLVRAVKDPSMLLGHLAQRLDDLEGRSWRCIRQLLIRSADTNHFLHDRLRLQNPVLRLER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ +L  Q  IE+ +                                            
Sbjct: 357 CREQLLLVQSRIEKTMMH------------------------------------------ 374

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487
                 ++    S++     LQ+ +   T+ RGY+ ++       +T +  LA    + I
Sbjct: 375 -----TVERAGQSLAFNAGKLQALSPLATMARGYSIVKKLPGGAVVTDRDQLAPGDSLDI 429

Query: 488 NFFDGQANAIV 498
               G+A   V
Sbjct: 430 LLRKGRAICRV 440


>gi|325204356|gb|ADY99809.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis
           M01-240355]
          Length = 451

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/490 (27%), Positives = 231/490 (47%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   K I+E++L+ + + GE+S      +SGH YFSLKD+ +++   ++KG  
Sbjct: 9   VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++    +EG    V GKI+ +    ++QI +  +   G G L  A E+ K +L  EG F
Sbjct: 68  ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG     +IA 
Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   +IP++S +GHETD
Sbjct: 188 VIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ +        L+ L +
Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  Q L   R  + +L + L +++   +      F      ++      ++      
Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISV------ 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                       K   R+          +L   R+                         
Sbjct: 356 ----------CKKNIDRFQTALPAAFSQLLARRRQS------------------------ 381

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    +S    +L++ + ++ L+RG++ +++T    I     L    ++ I F DG
Sbjct: 382 ---------LSAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432

Query: 493 QANAIVINKA 502
           + +  V  + 
Sbjct: 433 ETDVRVSKEQ 442


>gi|70732268|ref|YP_262024.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens
           Pf-5]
 gi|123775841|sp|Q4K6V9|EX7L_PSEF5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|68346567|gb|AAY94173.1| exodeoxyribonuclease VII, large subunit [Pseudomonas fluorescens
           Pf-5]
          Length = 459

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/500 (27%), Positives = 228/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +V++L+   + ++E   S++ V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVTQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKDKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVVLTLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+    
Sbjct: 182 VQGREATAQIVRALQLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  + NL  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLQRRVDNLHRRLVMRMRDRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L+ L + L +  + L     RLD L   L    E  +  +      +  R+ + 
Sbjct: 295 VRDRLRLDGLARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLGAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +                                   +
Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------REGL 382

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K    ++   +                 L   +   TL RGY+ + D     I       
Sbjct: 383 KGRRLQLHSQMQT---------------LHVVSPLATLGRGYSILLDDRGQAIRSAGQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLSARLGEGELQVRVED 447


>gi|315180969|gb|ADT87883.1| exodeoxyribonuclease VII, large subunit [Vibrio furnissii NCTC
           11218]
          Length = 423

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/475 (28%), Positives = 230/475 (48%), Gaps = 57/475 (12%)

Query: 27  IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86
           ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++KG+   + F P+ G + 
Sbjct: 2   LLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMFKGSNRFVRFKPQNGQQV 60

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPK 146
           LV  +++ +     YQIIIES+ P G G L    ++ K +L  EGLF+   K+P+P  P+
Sbjct: 61  LVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFDQLKMQLAAEGLFAQTLKHPLPEHPR 120

Query: 147 IIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205
            + VITS TGA + DILQ +  R P L +II+P  VQG++   +IA AI + N  +E   
Sbjct: 121 CVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTLVQGEDAAIQIAQAIGRANAREE--- 177

Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
               D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GHE D T+AD+ AD+RAP
Sbjct: 178 ---CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVGHEIDVTIADFVADVRAP 234

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSC 323
           TP+ AAE+      H + +    E +L++ +   +  +   L  L   L   +    L  
Sbjct: 235 TPSAAAELVSRDNSHKKQAFQGYEHKLSSAMRHYVSEQKGALKQLQYRLDKQHPMYRLQR 294

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
            + +LD L   LE  ++  + +  +H     +R++       +++    +  +++ +   
Sbjct: 295 QQQQLDELSMRLERAIQKQLNQTRQHVAKQQHRLQLQSPEKTLREQHYTLALRERSLI-- 352

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                                                          +  ++ S     +
Sbjct: 353 ---------------------------------------------DAMQRQLVSSRHRFT 367

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
                L + +   TL RGY+  Q +    + Q  ++ T  +++    DG+ ++ V
Sbjct: 368 RLIDKLDTVSPLATLSRGYSITQTSQGEIVRQASDVKTGDQLVTRLADGEIHSTV 422


>gi|296333413|ref|ZP_06875866.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675081|ref|YP_003866753.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149611|gb|EFG90507.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413325|gb|ADM38444.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 448

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LKD ++R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIV- 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + ++E       D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA+GHETD
Sbjct: 186 -----SRIEEANEKEVCDVLIVGRGGGSIEELWAFNEEIVARAIFASHIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKNRQLERETYRLEALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 361 TRYEEQTNQLRKNMNIQMKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  K +  +   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-ELIKSVSQIEEKDQFEVKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 433 DGVLTCEVLEKRGEEK 448


>gi|218960584|ref|YP_001740359.1| Exonuclease VII large subunit [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729241|emb|CAO80152.1| Exonuclease VII large subunit [Candidatus Cloacamonas
           acidaminovorans]
          Length = 446

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/490 (29%), Positives = 240/490 (48%), Gaps = 55/490 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +   YSV E++  ++ ++E++L  V V GEISG+   HSSGH YF+LKD ++ +    +K
Sbjct: 3   NVIIYSVYEITRQVRQVIETSLQPVFVMGEISGF-IRHSSGHIYFNLKDENATLRCTFFK 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F P +G++ +  GK+T +     Y + ++ +  +G G L    E+ KKKL +E
Sbjct: 62  GANASLTFQPADGMQVICFGKLTVYEKGGYYNLNVQKMQEAGMGLLQQKFEQLKKKLEKE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF+ +HK P+P  P  I +ITSPTGA ++DI+  I  R+P+ +I++P  VQG + P +I
Sbjct: 122 GLFAAEHKKPLPKYPDRIGIITSPTGAALQDIINIIKRRYPVELIVYPALVQGSDAPPQI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I   N           D II+ RGGGS EDL+ FNDE + RAI  SS+P+ISA+GHE
Sbjct: 182 IQGIRYFNK------TRDVDFIIITRGGGSQEDLFCFNDEALARAIYASSLPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+TLAD+ ADLRAPTP+ AAE+AVP K+ L + L +L+ RL+  +      K   L +L
Sbjct: 236 IDFTLADFVADLRAPTPSAAAELAVPDKKDLLNLLASLKKRLDLSVQNNFTGKRTPLLNL 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   + ++     + R D     L + L+                         + +
Sbjct: 296 QLELAKYHPERVWRGFQQRFDMAEMALNNALK------------------------QLPE 331

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R     K  +I Q +   +                        +            ++ 
Sbjct: 332 KRLQFEMKANNIMQQLNSRIELC---------------------LAKSKADCNLTWHQLN 370

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             ++++++     ++  + IL+  + ++   +G+          I+  + ++    + ++
Sbjct: 371 EKINNQLQCKTNRLNSLSEILEQLSPRSIQSKGWIMAF-KEGKLISSIKQVSEGENLSLD 429

Query: 489 FFDGQANAIV 498
           F DG A   V
Sbjct: 430 FADGIAETTV 439


>gi|152985148|ref|YP_001346723.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa PA7]
 gi|150960306|gb|ABR82331.1| exodeoxyribonuclease VII, large subunit [Pseudomonas aeruginosa
           PA7]
          Length = 462

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 138/505 (27%), Positives = 223/505 (44%), Gaps = 60/505 (11%)

Query: 1   MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M P          LD    +VS+L+   + ++E     V V GE+S      +SGH YF+
Sbjct: 1   MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD++++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L
Sbjct: 60  LKDSNAQIRCALFRQNAQRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A E  K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + 
Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           + P  VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA
Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +A  + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   
Sbjct: 233 VAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +   +  +   L  + + L +  + L     RLD L   L    E  +  ++     +  
Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+ +      +   RQ +      + +   +                             
Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAHEV---------------------------- 384

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                              +K     +    + L   +   TL RGY+ + D     I  
Sbjct: 385 -------------------LKDRRRRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425

Query: 476 KRNLATKTRILINFFDGQANAIVIN 500
                   R+     +G+    V +
Sbjct: 426 AGQAQPGQRLKARLAEGELEVRVED 450


>gi|121998462|ref|YP_001003249.1| exodeoxyribonuclease VII large subunit [Halorhodospira halophila
           SL1]
 gi|121589867|gb|ABM62447.1| Exodeoxyribonuclease VII large subunit [Halorhodospira halophila
           SL1]
          Length = 458

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 148/497 (29%), Positives = 229/497 (46%), Gaps = 58/497 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
           +++  D   Y+ S+L+  ++ ++E+ L  V V GEIS      SSGH YF+LKD  +++ 
Sbjct: 2   ERSRDDTAVYTPSQLNQEVRGMLETVLPSVWVEGEISNL-ARPSSGHMYFTLKDPGAQVR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++G  + +   P +G +  +  K + +P   ++Q+I+E L PSG G L  A E  K+
Sbjct: 61  CALFRGRASALRHRPADGDQVRIRAKASLYPARGEFQLIVEHLEPSGEGALQRAFEALKQ 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184
           +L  EGLF    K P+P +P+ + VITSPTGA IRD+LQ +  RF  L V+I+PV VQG+
Sbjct: 121 RLQAEGLFDAASKRPVPKMPRRLGVITSPTGAAIRDVLQVLERRFAALPVLIYPVPVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
                I  A+       E       D ++L RGGGS+EDLW FN+E + RAI    IP++
Sbjct: 181 AAAPAIVRALELAGHRAE------VDALLLTRGGGSLEDLWPFNEEAVARAIRACPIPVV 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHE D T+AD AADLRAPTP+ AAE   P  +  Q  L  L  RL     R +    
Sbjct: 235 SAVGHEVDLTIADLAADLRAPTPSAAAETLSPDGQAWQEQLERLGHRLEVAAGRRLGRAG 294

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           + L+ L + L   +  + L     RLD L   L       +  + R  +    R++    
Sbjct: 295 DQLSGLQRRLAAQHPGRRLRDRAQRLDELEGRLHRLGHQAVESRRRRLHTAEQRLQVQDP 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
                  RQ + E  Q +                                          
Sbjct: 355 RRRTTNERQRVAELAQRLH----------------------------------------- 373

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI-TQKRNLAT 481
                   +  ++++    +   +R L + +   TL+RGY  +Q   ++ I  +   +  
Sbjct: 374 ------HTVRGRLETSQQRLGNASRALHAVSPLATLERGYAVVQREEDSAILRRADAVRV 427

Query: 482 KTRILINFFDGQANAIV 498
             RI      G  +  V
Sbjct: 428 GERIRARLAHGALDCRV 444


>gi|293394887|ref|ZP_06639177.1| exodeoxyribonuclease VII [Serratia odorifera DSM 4582]
 gi|291422638|gb|EFE95877.1| exodeoxyribonuclease VII [Serratia odorifera DSM 4582]
          Length = 434

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 135/473 (28%), Positives = 217/473 (45%), Gaps = 53/473 (11%)

Query: 31  NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90
            + H+ +  EIS      SSGH YF+LKD+ +++   +++    +  F P+ G + LV  
Sbjct: 2   EMGHIWLSAEISNL-SQPSSGHWYFTLKDDRAQVRCAMFRNANRRTTFRPQNGQQVLVRA 60

Query: 91  KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150
            IT +     YQ+I ES+ P+G G L    ++ K++L  EGLF  Q K P+P   + + V
Sbjct: 61  SITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQRLSAEGLFDQQFKQPLPSPARRVGV 120

Query: 151 ITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209
           ITS +GA + DILQ +  R P L ++I+P  VQG E P  I  AI   N   E       
Sbjct: 121 ITSSSGAALHDILQVLQRRDPSLPIVIYPTPVQGAEAPLNIVRAIETANRRDE------C 174

Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
           D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD T+AD+ ADLRAPTP+ 
Sbjct: 175 DVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVADLRAPTPSA 234

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329
           AAE+    +  L   L                                            
Sbjct: 235 AAELVSRNQLELLRQLQ------------------------------------------- 251

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
              + LE  ++  + ++ + F+ I +R++       + + +  +L+ Q+ +E  ++  LR
Sbjct: 252 SQQQRLEMAMDYYLAQRQQQFSRINHRLQQQHPHLRLARQQTLLLKLQRRLEDGMQHQLR 311

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                 +     L   + Q   RI      +++   R++  L  ++ +      +    L
Sbjct: 312 LSSRRSERAQQRLA--QTQPLGRIHRYQQRVQQQEYRLQQALERQLNAYRQRFGVACSQL 369

Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           ++ +   TL RGY+  Q      +   +       +     DG   + V    
Sbjct: 370 EAVSPLATLARGYSVTQTPRGEVLKTTQQTQVGEMLKTRLQDGWVESEVKTVT 422


>gi|289209076|ref|YP_003461142.1| exodeoxyribonuclease VII large subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288944707|gb|ADC72406.1| exodeoxyribonuclease VII, large subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 471

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 137/501 (27%), Positives = 217/501 (43%), Gaps = 36/501 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            D P  +V+EL+     ++   L  V V GE+S  R   +SGH YFSLKD +S +  +++
Sbjct: 2   SDAPVLTVTELNQCADGLLRDRLGRVRVEGEVSNLRQY-ASGHQYFSLKDANSSVSCVLF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G          +G    + G+   +    ++QII+E L P+G G LL A ++ K+KL  
Sbjct: 61  RGNARNAA-RFSDGDAVQIQGRAGIYAARGQFQIIVEQLQPAGEGQLLAAFQRLKEKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP--LRVIIFPVKVQGDECP 187
           EGLF  + K P+P     + VITS  G V  DI + ++ RFP  L   ++P  VQG +  
Sbjct: 120 EGLFDPERKKPLPPWTHRLGVITSTQGDVRHDIERTLARRFPLLLPFTLYPTAVQGAQAA 179

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
                       L++       D+IILARGGGS+EDL  FN+E + RAIA S IP+++ +
Sbjct: 180 S------QIAAALEQAAREGTVDVIILARGGGSLEDLQAFNEESVARAIAASPIPVVTGV 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRA TPT AAE   P    L+  +     R+  +  + +     TL
Sbjct: 234 GHETDTTIADFVADLRASTPTAAAEAVSPDGATLRHRIERARDRMTTLAAQRVAQHRQTL 293

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N+L   L   +  Q +  +  RLD     L+   +    +  +   H+  R+      + 
Sbjct: 294 NALWTRLERRHPRQLMERNAQRLDDQHERLQRAWQRRHEQAGQRLQHLRLRLAGASPGNR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I   R  +    Q + +                            + I      + +L  
Sbjct: 354 IASARMRLDHLHQRLARA------------------------APAHDIRAHRERLARLHR 389

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +E+ +   +      +  T R L +   +  L+RGY  +Q      +           +
Sbjct: 390 DLEYQMRQALTIRQQRLEATRRQLNALGPQAVLERGYAILQTEEGQVLRDAARTEIGAPL 449

Query: 486 LINFFDGQANAIVINKAPPKE 506
                 G     V     P+ 
Sbjct: 450 KARLARGALELKVTATKSPEG 470


>gi|238898401|ref|YP_002924082.1| exonuclease VII, large subunit [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259646294|sp|C4K5U1|EX7L_HAMD5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|229466160|gb|ACQ67934.1| exonuclease VII, large subunit [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 448

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 135/489 (27%), Positives = 230/489 (47%), Gaps = 53/489 (10%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            +VS+L+  ++ I+E N+  + +  EIS +    SSGH YF+LKD  +++   +++    
Sbjct: 10  LTVSQLNIRVRDILEKNIGQIWLMAEISNF-SQPSSGHWYFTLKDERTQVRCTMFRNNNR 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            I F  + G++ LV   ++ +    +YQ+I+ES+ P+G G L    E+ KKKL  EGLF+
Sbjct: 69  HIFFKVQNGLQVLVRACVSLYEPRGEYQLIVESMEPAGEGILRQKFEQLKKKLAAEGLFA 128

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           +++K P+P   K + VITS +GA + DIL+ +  R P L V+I+P KVQG+  P +I  A
Sbjct: 129 EKYKKPLPDSVKQLGVITSISGAALFDILKVLQHRDPSLPVVIYPTKVQGEYAPSQIVKA 188

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   N   E       D++ILARGGGS+EDL  FNDE + RAI +S +PI+SAIGHETD 
Sbjct: 189 LSIANRRAE------CDLVILARGGGSLEDLSCFNDERVARAIFDSDLPIVSAIGHETDV 242

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           ++AD  ADLRA TP+ AAE     +  +   L + + R+   +             L   
Sbjct: 243 SIADLVADLRASTPSAAAERVTRDRRDIIQKLGSHQQRMAMAMDYYFSKLRQRFVHLSHC 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           +      L   R ++  +    + ++E II  K +   H    +K + L           
Sbjct: 303 IEQQHPQLELERQKMQLI--HFKISMEKIIQAKLKGLIHQEAHLKKNVLRRA-------- 352

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                                               + +I+     I++   +++  +  
Sbjct: 353 -----------------------------------PQIQIYQYQKQIQEEFHQLKAAMER 377

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           KI       ++ +  L++ +   TL RGY+    ++ + + +   +     +      G 
Sbjct: 378 KIHHYVQRFAVVSSRLETVSPLATLARGYSVTCFSSGSMLKKIEQVQIGDELNTRLQGGW 437

Query: 494 ANAIVINKA 502
             + V+   
Sbjct: 438 IKSQVLEIK 446


>gi|269140131|ref|YP_003296832.1| exodeoxyribonuclease VII large subunit [Edwardsiella tarda EIB202]
 gi|267985792|gb|ACY85621.1| exodeoxyribonuclease VII large subunit [Edwardsiella tarda EIB202]
 gi|304559965|gb|ADM42629.1| Exodeoxyribonuclease VII large subunit [Edwardsiella tarda FL6-60]
          Length = 460

 Score =  350 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/506 (26%), Positives = 233/506 (46%), Gaps = 57/506 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + +  EIS      +SGH YF+LKD+ +++   +++ + 
Sbjct: 9   IFTVSRLNQTVRQLLELEMGQIWLSAEISNL-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P+ G + LV   IT +     YQ+I ES+ P+G G L    +  K+ L  EGLF
Sbjct: 68  RRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDALKQHLQAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK P+P   + + VITS +GA + D+L  +  R P L V+I+P  VQG E P ++  
Sbjct: 128 DVGHKQPLPSPARCVGVITSASGAALHDVLHVLRRRDPALPVVIYPSAVQGAEAPGQLVR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N   E       D++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD
Sbjct: 188 AIALANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASHIPIVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++AD+ ADLRAPTP+ AAE+    ++ L   L++   RL+  +   +  +   L  L  
Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLDMALDYTLARRRQRLQQLHH 301

Query: 313 ALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R +  L  L R LE  ++  +    R +     R++     H +++ +
Sbjct: 302 RLEQQHPQLRLARQQARLLNLRRRLEEAIDTRLRLAERRWRLSGERLQQRSPAHTLRQQQ 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + +    +E                                           ++++  
Sbjct: 362 YRLQQLSHRLE-------------------------------------------SQLQRS 378

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++ +        S     L+  +   TL RG++  Q  +   + ++  +A    +     
Sbjct: 379 VAAR----REHFSALCARLEGISPLATLARGFSVTQRDDGLLLRRREQVAPGDTLRTRLE 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQLHN 516
           DG   + V    P      ++ +   
Sbjct: 435 DGWVESQVTATRPLTAHRPRRAKRSA 460


>gi|196228978|ref|ZP_03127844.1| exodeoxyribonuclease VII, large subunit [Chthoniobacter flavus
           Ellin428]
 gi|196227259|gb|EDY21763.1| exodeoxyribonuclease VII, large subunit [Chthoniobacter flavus
           Ellin428]
          Length = 458

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 150/497 (30%), Positives = 240/497 (48%), Gaps = 50/497 (10%)

Query: 5   SQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           S + + + P   SVSEL+  ++  +E ++  V V GEIS YR    SGH YF+LKD  S+
Sbjct: 8   SPEPAREEPRVLSVSELTRAVRATLEDHIGQVWVEGEISNYRKQP-SGHQYFTLKDEQSQ 66

Query: 64  IDAIIW-KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +  + + +G L   +    +G+   V G +T +    +YQ+ ++++  +G+G L    E 
Sbjct: 67  VACVWFARGGLRMKQVALSDGMHVQVRGALTVYEARGQYQLNVQTVQAAGAGLLQAKFEA 126

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K+KL  EGLF  + K P+P  P  I ++TS   A +RD+L  ++ R P +RV+I PV+V
Sbjct: 127 LKRKLEAEGLFDPERKRPLPRFPMTIGLVTSSNAAALRDMLNILARRAPWVRVVINPVRV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG    +EIA AI + N LKE    P  D+I++ RGGGSIEDLW FN+E++ RAI  S++
Sbjct: 187 QGQGAAQEIAGAIAEFNDLKEQGILP-LDVIVVGRGGGSIEDLWEFNEEIVARAIVQSAV 245

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SA+GHE D+T+AD+AADLRAPTP+ AAE+ VP  E L+   +   ARL      L+ 
Sbjct: 246 PVVSAVGHEIDFTIADFAADLRAPTPSAAAELIVPDGEALRRYFVESRARLQRCAAGLLL 305

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            + N L  L +   +    L   R    R+    E     I                   
Sbjct: 306 RERNRLTYLSRV-ASPQTLLRTLREYTQRVDMAGEILRRTI------------------- 345

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                         ++Q +    +       L +      L + R     R+    T + 
Sbjct: 346 --------------QEQRLAAERRLLDLRARLREHLPDRHLPLYRH----RLAAAQTRLA 387

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                        ++      +    +L++ +   TL RGY+         I   +++A 
Sbjct: 388 NC-------ARANLQKLQQRFAHAETLLKALSPDATLARGYSITSVQGGAIIRSAKDVAP 440

Query: 482 KTRILINFFDGQANAIV 498
           +T++     DG  +++V
Sbjct: 441 QTKLTTRLKDGTIDSVV 457


>gi|227112676|ref|ZP_03826332.1| exodeoxyribonuclease VII large subunit [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 438

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/490 (27%), Positives = 218/490 (44%), Gaps = 53/490 (10%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  + + GEIS      SSGH YF+LKD  +++   +++ +  K+ F P+ G + L+   
Sbjct: 1   MGQIWLSGEISNL-SQPSSGHWYFTLKDERAQVRCAMFRTSNRKVTFRPQNGQQVLIRAS 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           IT +     YQ++ ES+ P+G G L    E+ K++L  EGLF  Q K  +P   K + VI
Sbjct: 60  ITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQRLAAEGLFDQQFKQVLPSPAKQVGVI 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS +GA + DILQ +  R P L VI++P  VQG E P +I  AI   N   E       D
Sbjct: 120 TSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAEAPLQIVRAIELANQRDE------CD 173

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FNDE + RAI  S IPI+SA+GHETD T+AD+  DLRAPTP+ A
Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVGDLRAPTPSAA 233

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           AE+    +  L   + +   RL   +   +  +      L   L      L  +R     
Sbjct: 234 AELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNRYFTRLHHRLQQQHPQLRLARQ---- 289

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
                                              + K RQ + +  Q   Q+ +   R 
Sbjct: 290 --------------------------------QAQLVKLRQRLDDAMQQ--QLRQTSRRS 315

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             L+++           + + R+       ++L  +++  +  ++      + I    L+
Sbjct: 316 ERLQQRLMQQQPQTRIHRAQQRL-------QQLSYQMQSAVERQLNQNKQKLGIACSRLE 368

Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
             +   TL RGY      +   +     ++    +     DG   + V   AP +    K
Sbjct: 369 GVSPLATLARGYNVTTAPDGKVLKNVAQISPGETLKTRLQDGWVESQVTTLAPNQNAVKK 428

Query: 511 KCQLHNNKRE 520
           + +  +   +
Sbjct: 429 RRKPSSPTPK 438


>gi|224826271|ref|ZP_03699373.1| exodeoxyribonuclease VII, large subunit [Lutiella nitroferrum 2002]
 gi|224601372|gb|EEG07553.1| exodeoxyribonuclease VII, large subunit [Lutiella nitroferrum 2002]
          Length = 451

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 141/493 (28%), Positives = 236/493 (47%), Gaps = 57/493 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS L+   + ++ES L  + + GEIS    + +SGHAYF LKD  ++I  ++++  L  
Sbjct: 12  SVSALNRMARDLLESGLPALWIGGEISNLT-LAASGHAYFLLKDGSAQIRCVMFRHKLAG 70

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P EG++  + G +T +    +YQI ++S+  +G G L  A EK K+KL  EGLF  
Sbjct: 71  LGFRPGEGMQVELKGLVTLYEARGEYQINVDSMRSAGLGRLFEAYEKLKQKLTAEGLFDA 130

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K PIP  P  I ++TSP  A +RD++  +  R P + VI++P +VQG    +++A AI
Sbjct: 131 ARKRPIPAHPAAIGIVTSPAAAALRDVVTTLRRRMPSIPVILYPSQVQGQGSAEQLAAAI 190

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            +             D++I+ RGGGSIEDLW FN+E + RAIA   IP++S +GHETD+T
Sbjct: 191 QR------AGERREVDVLIVCRGGGSIEDLWSFNEEGVARAIAACPIPVVSGVGHETDFT 244

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ AD RAPTPT AAE+  P +EHLQ  +      L   + RL+  K   L+ L + L
Sbjct: 245 ISDFVADRRAPTPTAAAELVSPSREHLQGQVELARRHLARALGRLLTDKAQRLDFLSRRL 304

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  L      L  +++ ++ ++        +R++                
Sbjct: 305 KHPGEHLRRQRESLRLAEDRLRRHVQGLLEQRRWRLQLAESRLRRHRP------------ 352

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           +  QH++Q+                                      +L   +       
Sbjct: 353 DLAQHVQQL-------------------------------------DRLSEALHRAGDGW 375

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           +     ++      L++   +  L+RGY  +Q  +   +     L    R+ +   +G+ 
Sbjct: 376 VGRHRLTLVRLAGTLEAMNPQAVLERGYAIVQKADGRAVRSPLELLNHERVTLQLAEGRT 435

Query: 495 NAIVINKAPPKEQ 507
            AI+ + A  + +
Sbjct: 436 EAIIDHPAGAQPE 448


>gi|167628422|ref|YP_001678921.1| exodeoxyribonuclease vii, large subunit [Heliobacterium
           modesticaldum Ice1]
 gi|167591162|gb|ABZ82910.1| exodeoxyribonuclease vii, large subunit [Heliobacterium
           modesticaldum Ice1]
          Length = 455

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 133/487 (27%), Positives = 240/487 (49%), Gaps = 54/487 (11%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             +SV++L+ +++ ++E    L+ + V+GEIS ++  H+SGH YF+LKD  S + A++++
Sbjct: 3   KIWSVTQLNTYIQGLLEAAPRLTDLWVQGEISNFKH-HTSGHMYFTLKDRESVVKAVMFR 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G    + F PE G++ ++ G+++ +P    YQI  E + P+G G +  ALE+ K++L  +
Sbjct: 62  GKNRCLSFRPENGLKVILRGQVSVYPRDGIYQIYAEEMEPAGLGGIFLALEQVKQRLAAD 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+ + K P+P +P+ + ++T+PTGA IRD+   +  RFP + +   P  VQG+E    
Sbjct: 122 GLFAAERKRPLPLLPRKVGIVTAPTGAAIRDLFSVLQRRFPTMNIAFAPAVVQGEEAVPS 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +  A+ ++         P  D++I+ RGGGS EDLW FNDE + RAIA   +P++SA+GH
Sbjct: 182 LIRALQRIVR------VPGVDVVIIGRGGGSREDLWAFNDEALCRAIAACPVPVVSAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E+D +L D  AD+RA TP+ AAE+ VP                                 
Sbjct: 236 ESDVSLTDLVADMRAATPSAAAELVVP--------------------------------- 262

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                       S    R+D L  +L+  + + + R+ R  + +  R   D  +  ++  
Sbjct: 263 ----------LYSALHGRVDDLALQLQRAMTVRLARERRALSALAGRPSLDNPLLRLRAP 312

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           RQ + + ++ + + V    R   L ++ K     +L   +  R+      I+ L  R+  
Sbjct: 313 RQRVDQFEERLRRAV-SLSRAAQLRRRLKELEGRLLSASSPQRLCPRRERIEDLKHRLIA 371

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +    +      +++   +L + +    L RG+    D+    +     +A   R+ I  
Sbjct: 372 LSEKGLHGRRRELAMQAGLLDALSPLAVLDRGFALCLDSAGQVLRDSAAVAEGERVDIVL 431

Query: 490 FDGQANA 496
             G+   
Sbjct: 432 QRGELTC 438


>gi|254513980|ref|ZP_05126041.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           NOR5-3]
 gi|219676223|gb|EED32588.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           NOR5-3]
          Length = 460

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 140/504 (27%), Positives = 234/504 (46%), Gaps = 49/504 (9%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N       + S+L+  ++ ++ES+ S V V GEIS      SSGH YF+LKD+ +++   
Sbjct: 2   NQTQAETLTPSQLNRQVRSLLESHFSFVWVEGEISNL-ARPSSGHWYFTLKDDKAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    ++ F P+ G +  +  +++ + G  ++Q+I E + P+G+G L    E  + +L
Sbjct: 61  MFKNYNQRLRFNPQNGDQVRLRARVSLYEGRGEFQLIGEFMEPAGAGALQARFEALRDQL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  +P     +AVITSPTGA ++DIL  ++ R P +RV + PV VQG   
Sbjct: 121 RQEGLFDAGIKQALPRSVAHLAVITSPTGAALQDILHVLARRNPSIRVTVLPVSVQGTSA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI  A+   N   + R     D +ILARGGGS+EDLW FNDE + RAI  S +P++  
Sbjct: 181 AAEIRQALRDANYSAKTRDDCDFDAVILARGGGSLEDLWAFNDEALARAIVASELPVVCG 240

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T+AD+AAD RAPTP+ AAE+    +E L + L     RL+  +   ++     
Sbjct: 241 VGHEVDVTIADFAADARAPTPSAAAELLSDDREELLAQLEQSRKRLSRAMHHHLERANLQ 300

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L+ L   L +    L     RLD L   L   + + + +  R  N   +R+++      I
Sbjct: 301 LSQLRARLRHPGDRLREQSQRLDELEGRLRRAMNLRLDQLRRDLNVRSDRLRTHSPGRRI 360

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +++++H+    Q     ++  +      +++ +                           
Sbjct: 361 EQHQEHL----QRQRVALRVAMGQKLAWQRQALQRR------------------------ 392

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                               ++L S      L RGY+ + D     I     +A K ++ 
Sbjct: 393 -------------------EQVLASLNPLAILDRGYSILSDGQGTVIRASTEVAAKQKLY 433

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
                G     V  +    ++ +K
Sbjct: 434 ARLAQGSLELRVEAQQREDDKNSK 457


>gi|152980028|ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp.
           Marseille]
 gi|189037844|sp|A6T178|EX7L_JANMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|151280105|gb|ABR88515.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp.
           Marseille]
          Length = 453

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 140/490 (28%), Positives = 221/490 (45%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVS L+  +  ++E N     V GEIS +    +SGH YF+LKD+ +++ A++++G  
Sbjct: 16  VLSVSALNQAVSRMLERNFPLSWVSGEISNFTC-AASGHWYFTLKDSAAQVRAVMFRGRA 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F+P EG +  V   +T +     YQ+ +E++  +G G L  A  + K+KL  EGLF
Sbjct: 75  QYADFMPREGDKVEVRALVTLYAPRGDYQLSVEAIRRAGVGNLYEAFLQLKEKLNAEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  IP   + I ++TSP  A +RDIL  +  R P +RVI++P  VQG+    +IA 
Sbjct: 135 DPARKRAIPSFARTIGIVTSPQAAALRDILTTLQRRAPHVRVILYPTPVQGEGSANKIAQ 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++++ RGGGSIEDLW FN E++ R I    IP+I  +GHETD
Sbjct: 195 AIATASARAE------CDVLLVCRGGGSIEDLWSFNHELVARTIVGCDIPVIVGVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+AADLRAPTPT AAE+A   +    + L      +  ++ R +     TL+ L +
Sbjct: 249 FTIADFAADLRAPTPTAAAELAATPRADWLARLEAQADDMRYVLKRQLSDTAQTLDWLSR 308

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    ++  R +L  L   L H   I + +       + NR  S             
Sbjct: 309 RLISPAAYIAHERMKLQNLQARLGHATRIPLSKAQFALAQLRNRWLSQLP---------- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
              + Q +                  I     +  Q  N I      +  L  ++     
Sbjct: 359 -DTQAQRL----------------HVINHARRMSNQINNHIASQRQSLAALSAQL----- 396

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                            +    + TL+RGY  I D     +   + L  +  + +   DG
Sbjct: 397 -----------------EMLNPQRTLERGYAMITDEKGKIVRAPKELQPRQSVTVRLADG 439

Query: 493 QANAIVINKA 502
            A   + +  
Sbjct: 440 TAQVGIASVQ 449


>gi|170718482|ref|YP_001783696.1| exodeoxyribonuclease VII large subunit [Haemophilus somnus 2336]
 gi|168826611|gb|ACA31982.1| exodeoxyribonuclease VII, large subunit [Haemophilus somnus 2336]
          Length = 444

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 138/492 (28%), Positives = 222/492 (45%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                YSVS+L+  ++ ++E  L  V + GEIS +     SGH YFSLKD ++++   ++
Sbjct: 2   TQAKIYSVSQLNQSVRQMLEGQLGSVWLTGEISNFT-QPVSGHWYFSLKDENAQVRCAMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F  + G++ LV   ++ +     YQ+IIES+  +G G L    E  K  L  
Sbjct: 61  RMKNMRVGFKAQNGMQVLVRASVSLYEPRGDYQLIIESMNLAGDGLLQRQFEALKLTLAA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K  +P   K + +ITSPTGA ++DIL  +  R P L V+I+P  VQG E   
Sbjct: 121 EGLFAQHYKKNLPHFAKSVGIITSPTGAALQDILHILQRRDPSLHVVIYPTAVQGKEATA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI   I   N  +E       D++I+ RGGGS+EDLW FN+E + RAI +S +PIISA+G
Sbjct: 181 EIVQMIELANQRRE------VDVLIVGRGGGSLEDLWCFNEERVARAIFHSELPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306
           HE D T+AD+ AD+RAPTP+ AAE+    ++ L   L   + RL   + R  +   K+  
Sbjct: 235 HEIDVTIADFVADVRAPTPSAAAELVSRHQQELLDQLFYRKQRLEMALDRFFQQKVKLLQ 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                    +    L+  +  + +L   L   L   + +K +    +  R+ +  L + +
Sbjct: 295 RLQFRLQQQHPQSQLNIQQKMMQQLLHRLHLALSTFVDKKQQKMTALCRRLDNSPLPYYV 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           QK  Q +++ +  +                                              
Sbjct: 355 QKQHQILVQLELRL---------------------------------------------- 368

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               L  K K+    +S     L S +    L RGY+  ++     +     +     I 
Sbjct: 369 -NSGLQKKFKNADYQLSRLCGKLDSLSPLKVLARGYSITKNQQGQALKNSLQIEVGQLIS 427

Query: 487 INFFDGQANAIV 498
                G   + V
Sbjct: 428 TQLERGIIVSRV 439


>gi|71908824|ref|YP_286411.1| exodeoxyribonuclease VII large subunit [Dechloromonas aromatica
           RCB]
 gi|71848445|gb|AAZ47941.1| Exodeoxyribonuclease VII large subunit [Dechloromonas aromatica
           RCB]
          Length = 450

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 138/506 (27%), Positives = 220/506 (43%), Gaps = 59/506 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P       +    SV+ L+  ++  +ES      V GEIS      SSGH YFSLKD+ +
Sbjct: 2   PAPTSPVSNT-VLSVASLNRLVRDCLESAFPLTWVGGEISNLT-YASSGHVYFSLKDSSA 59

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  +IW+     + +  E G +      ++ +    ++Q+ IE++  +G G L     +
Sbjct: 60  QVRCVIWRSRAQLLGWRLENGQKIEARALVSFYEPRGEFQLNIEAVRRAGQGDLFERFLR 119

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K +L  EGLF+ + K PI   P+ IA+++S   A +RD+L  +  R P LR+ IFP  V
Sbjct: 120 LKAQLEAEGLFAPESKRPIAPFPRHIAIVSSLQAAALRDVLTTLHRRAPHLRITIFPSLV 179

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+   ++IA A+ Q +           D IIL RGGGSIEDLW FN+E + RAI  S+I
Sbjct: 180 QGEGASQKIAEALGQASAS-------DCDTIILCRGGGSIEDLWAFNEECVARAIRASAI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I+ +GHETD+T+AD+AADLRAPTPT AAE+  P ++ L + L  LE +L   + R + 
Sbjct: 233 PVIAGVGHETDFTIADFAADLRAPTPTAAAELVSPDRDSLLTRLSQLEGQLQRRVERGLA 292

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   ++ L   L +  + +   +   + L + L+                         
Sbjct: 293 DQQQRIDWLGSRLVHPAERIRLRQQENEALSQRLQRA----------------------- 329

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L+  +   R  +    Q                                 R   L   ++
Sbjct: 330 LLRQMDHARLQLTTLGQRQATARP--------------------------RPELLARTLE 363

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L  R+       +      ++  +  L+       L RGY      +   I     L  
Sbjct: 364 HLRHRLGKQTQWALSQHSGKLNSLSSSLKQLDPHAVLTRGYALAIGPDGRAIRNASALTP 423

Query: 482 KTRILINFFDGQANAIVINKAPPKEQ 507
              + ++F  G A A V       E 
Sbjct: 424 GDALKLSFAQGTATATVNQVVAMPEA 449


>gi|85059728|ref|YP_455430.1| exodeoxyribonuclease VII large subunit [Sodalis glossinidius str.
           'morsitans']
 gi|123519087|sp|Q2NS50|EX7L_SODGM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|84780248|dbj|BAE75025.1| exodeoxyribonuclease VII large subunit [Sodalis glossinidius str.
           'morsitans']
          Length = 458

 Score =  349 bits (895), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 140/503 (27%), Positives = 234/503 (46%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E  +  + + GEIS +    +SGH YF+LKD+ +++   +++ T 
Sbjct: 9   IFTVSRLNKTVRELLEGEMGQIWLTGEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNTN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +  F P  G + LV   +T +     YQ+I ES+ P+G G L    E+ K++L +EGLF
Sbjct: 68  RRTTFAPRNGQQVLVRASLTLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLSDEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S Q K P+P   + + VITS +GA + DILQ +  R P L V+I+P  VQG E P +I  
Sbjct: 128 SQQFKQPLPSPARRVGVITSASGAALHDILQVLQRRDPSLPVVIYPTAVQGQEAPAQILR 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+   N   E       D++I+ RGGGS+EDL  FNDE + RAI  S +P++SA+GHETD
Sbjct: 188 ALEAANRRAE------CDVLIVGRGGGSLEDLASFNDERVARAIFASRLPVVSAVGHETD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRAPTP+ AAE+    +  L   L + + RL   +   +  +    + L  
Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRLEMAMDYFLAQRQQRYSRLQH 301

Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      L  +R       L R L+  ++  + +  R  +++  R+        I + +
Sbjct: 302 RLQQQHPQLRLARQHTALMTLRRRLDDGVQGQLRQAQRRHDYVRQRMVQQAPAARINRAQ 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +   +  + Q                                                
Sbjct: 362 QRLQALRYQLSQG----------------------------------------------- 374

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +S ++   + +       L+  +   TL RG++   D++   + Q R L+   R+     
Sbjct: 375 ISLRVNRQNNAFVALCSRLEGMSPLKTLARGFSVTTDSHGAVVKQTRQLSAGDRLTTRLR 434

Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513
           DG   + V        +  ++ Q
Sbjct: 435 DGWVESQVTEITRQPARRPRRSQ 457


>gi|291613834|ref|YP_003523991.1| exodeoxyribonuclease VII, large subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291583946|gb|ADE11604.1| exodeoxyribonuclease VII, large subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 459

 Score =  349 bits (895), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 148/496 (29%), Positives = 238/496 (47%), Gaps = 57/496 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +   SV EL+   K ++E  L  + VRGEIS +    +SGH YFSLKD  +++  ++++ 
Sbjct: 19  NHVLSVRELNLAAKQLIEGGLPLLWVRGEISNFVS-AASGHWYFSLKDEQAQVRCVMFRH 77

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               +EF P  G++  V+   T +     +Q+ +E + P+G G L  A E  K KL  EG
Sbjct: 78  KSQYLEFKPSNGMQVEVLALATLYEARGDFQLTLEKMRPAGLGALYEAFEHLKNKLEAEG 137

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K  +P +PK I ++TSP  A +RD+L+ ++ R P + V+++P  VQG+   ++I
Sbjct: 138 LFDAGRKRDLPLLPKQIGIVTSPQAAALRDVLRTLANRMPNVPVLLYPTPVQGEGAAQKI 197

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI   +   E       D++I+ RGGGSIEDLW FN+E++ RAIA S IP++S +GHE
Sbjct: 198 AQAIRLASQRAE------CDVLIVCRGGGSIEDLWAFNEEVVARAIAASHIPVVSGVGHE 251

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRA TPT AA+  VP K+ L+  L     RL   + R  +  +  ++ L
Sbjct: 252 TDFTIADFVADLRAATPTAAAQAVVPDKQELRQRLAQHRQRLVRAVARRFEQGMQQVDFL 311

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L +  Q +     RL+ L + +    +  + R+   ++          L H ++  R
Sbjct: 312 QHRLVHPAQRIRQQGERLEALQQRMRFAHDHAMQRQQGRWSM---------LWHRLRGAR 362

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            ++   Q+    + ++    +        A L  LR+                       
Sbjct: 363 PNLARLQEQQSNLARRLNGAMLQTLDRHDARLTALRQH---------------------- 400

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             LQ    K  L RGY+ ++D   N +    +L    ++ I F 
Sbjct: 401 ------------------LQLLDPKQVLARGYSMVRDVQGNIVVSSDSLELGEKLDITFA 442

Query: 491 DGQANAIVINKAPPKE 506
            G  +A+V  K  P  
Sbjct: 443 QGGVHAVVQEKHEPNS 458


>gi|94268197|ref|ZP_01291113.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1]
 gi|93451692|gb|EAT02469.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1]
          Length = 445

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 148/497 (29%), Positives = 242/497 (48%), Gaps = 55/497 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
               +N  D+   +VSEL+  ++ ++E++ + V V GEIS  R   +SGH YF+LKD H+
Sbjct: 2   EADMENPFDNRIQTVSELTRSIRGLLETSYNMVTVSGEISNLR-RPASGHLYFTLKDAHA 60

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  +++KG    +   P +G+E L  G+++ +    +YQ+I++ +   G+G L  A ++
Sbjct: 61  QLRGVLFKGQQRYLACNPADGLEVLCRGRLSVYEPRGEYQLIVDFMDGKGAGLLRVAFDR 120

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKV 181
            K KL  EGLF    K P+PF+P+ IA++TSP GA +RD L +     P   + I PV+V
Sbjct: 121 LKAKLEAEGLFEPARKKPLPFLPRRIALVTSPQGAAVRDFLTQAGKLCPFTAIEIMPVRV 180

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD    EIA+AI QLN  +        +II+L RGGGS+EDLW FN+E + RAIA S I
Sbjct: 181 QGDGAAAEIADAIHQLNERQ------SSEIIVLCRGGGSLEDLWAFNEEAVARAIAASQI 234

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SA+GHE D+T+AD  ADLRAPTPT AA + +P  E L +    L  RL   + R + 
Sbjct: 235 PVVSAVGHEVDYTIADLVADLRAPTPTAAARLILPDGEQLLAQARELSHRLAAAMRRHLL 294

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                L +  + L +  + L+    RLD L  +L   L+  +  + +      + ++   
Sbjct: 295 EARRRLEAEQRLLRDPARGLAQHAIRLDYLRADLARALQGRLRHRRQRLLAWEHALQRLD 354

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               +  +R  + E Q  +  +++                                   +
Sbjct: 355 PRRRLTAHRAMLQENQLRLSFLMR-----------------------------------Q 379

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L  R               +S    IL++ +    L RGY   +  +   +   +  A 
Sbjct: 380 LLSER------------RNQLSRAAAILEAVSPLAVLGRGYAIARRPDGTILRSVKEAAP 427

Query: 482 KTRILINFFDGQANAIV 498
              + +   DG  + ++
Sbjct: 428 GAPLRLTLHDGDLHCVI 444


>gi|237808918|ref|YP_002893358.1| exodeoxyribonuclease VII, large subunit [Tolumonas auensis DSM
           9187]
 gi|259646301|sp|C4L8C6|EX7L_TOLAT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|237501179|gb|ACQ93772.1| exodeoxyribonuclease VII, large subunit [Tolumonas auensis DSM
           9187]
          Length = 448

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 219/494 (44%), Gaps = 57/494 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E  +  V +  EIS     HSSGH YF+LKD  ++I A ++KG  
Sbjct: 8   IYTVSRLNNVVRLLLEQEMGLVWLTAEISNLV-QHSSGHWYFTLKDQQAQIRAAMFKGQN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P+ G + LV G+++ +     YQ+I+E + P+G G L   LE  K +L+ EGLF
Sbjct: 67  RRVSFRPQNGQQILVQGQLSLYEARGDYQLIVEKMQPAGDGLLQMKLEALKARLMAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             + K  +P  PK I +ITSPTGA I D+L  ++ R P L VI++P  VQG+     + N
Sbjct: 127 DPRRKRALPTQPKQIGIITSPTGAAIHDMLTILARRDPALPVILYPSAVQGESAVPALLN 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+       E       D++I+ RGGGS+EDLW FNDE++VRAIANS IPI+SA+GHETD
Sbjct: 187 ALETAWRRNE------CDLLIIGRGGGSLEDLWCFNDELVVRAIANSPIPIVSAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL+D+AADLRAPTP+ AAE+    ++     L   + RL   I   ++           
Sbjct: 241 VTLSDFAADLRAPTPSAAAELVSRDQQQQLHRLAQYQHRLQQAIQLRLQQHQIAWQQQYA 300

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N    L     + D L   LE  +   + +  + +     R++       +   +
Sbjct: 301 RLNTQNPRYQLQQKIQKQDELQFRLERVMTQTLVQANQQWMSQHQRLQQVSPKRQLPNLQ 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +      Q +   ++   +                                         
Sbjct: 361 KQHAYLYQRLLNAMQSKQQDSAQTLSR--------------------------------- 387

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                          +  L + +    L RGY+   +     I   + + T   + +   
Sbjct: 388 --------------LSGQLHALSPLQVLARGYSVTTNAKGELIHSSQQVTTGEMLNVQLH 433

Query: 491 DGQANAIVINKAPP 504
            G            
Sbjct: 434 QGTLKVRTEEVKSE 447


>gi|227873693|ref|ZP_03991926.1| exodeoxyribonuclease VII [Oribacterium sinus F0268]
 gi|227840461|gb|EEJ50858.1| exodeoxyribonuclease VII [Oribacterium sinus F0268]
          Length = 472

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 134/508 (26%), Positives = 234/508 (46%), Gaps = 42/508 (8%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           + + EY+VS+++ +L  +++ +   SH+ V GEIS  +    SGH YF+LKD  S++  I
Sbjct: 1   MANKEYTVSQVNRYLARMMQEDFFLSHITVSGEISNLKMHP-SGHIYFTLKDQASQLSGI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F  E G++ L  G+I  +     YQI  +S   +G G L    E  KK+L
Sbjct: 60  MFAGKRAGLAFPLENGMKVLCSGRIGVYEAGGSYQIYADSFQKAGQGDLYLRFEALKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            E GLF   +K PIP   + I ++T+ +GA +RDI+Q    R P   + ++P  VQG+  
Sbjct: 120 QEMGLFDAMYKKPIPKYARKIGIVTASSGAAVRDIIQIAKRRNPFVELFLYPALVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I +L+ +         D++I+ RGGGSIEDLW FN+E + +AI N+  PIISA
Sbjct: 180 VASICKGIARLDQM-------GLDVLIVGRGGGSIEDLWAFNEEAVAKAIFNADTPIISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD+ +DLRAPTP+ AAE+AV         L +     +  + R+I+     
Sbjct: 233 VGHETDTTIADFVSDLRAPTPSAAAELAVFDYMQFVDDLASYTYSFHQRMERIIQKMRQR 292

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +          +    L   ++R+  L    +  +E+ I                  L +
Sbjct: 293 VKEEELRFSVLHPRNILQGKQHRILDLESRFQRQMELCIQENKSAL-----------LPY 341

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +                     +       K+++    +   + K +I       ++  
Sbjct: 342 RVFPQW-----------------MERKLTNAKDRMGEYQVFPHKMKEKILLAKNKEERYR 384

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                ++  K++     ++I +    + +    L +G++ +Q  +   ++    +     
Sbjct: 385 H-FPSLMEGKLEKKKHQLAILSEQFDALSPLRLLSKGFSYVQREDGKRMSSVEQVKMGEI 443

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512
           + I+F DG A A V+ K   +    +K 
Sbjct: 444 LQIHFTDGTAKAKVLEKQKEERLGAEKP 471


>gi|77359600|ref|YP_339175.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123744167|sp|Q3IHJ4|EX7L_PSEHT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|76874511|emb|CAI85732.1| exonuclease VII, large subunit [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 444

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 139/490 (28%), Positives = 223/490 (45%), Gaps = 57/490 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS L+  ++ ++E   + + + GEIS +    +SGH YFSLKD+ ++I A +W+G  
Sbjct: 9   IYTVSRLNREIRALLEQGFASLVLTGEISNFIT-PASGHWYFSLKDDKAQIKAAMWRGNN 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
               + P  G +  V  +++ +     YQ+I+E + P+G G      +  K +L  EGLF
Sbjct: 68  RNQSYRPINGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQFKQEFDALKMRLAAEGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           S  +K P+P     I VITS TGA I+DIL  +  R P L VII+P  VQG +   ++  
Sbjct: 128 SSVYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKDAHLQLIK 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N   E       D++IL RGGGS+EDLW FN E + RAI NS +PI+SA+GHE D
Sbjct: 188 QIELANIRSE------VDVLILGRGGGSLEDLWCFNHEQLARAIFNSQLPIVSAVGHEID 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T++DY AD+RA TP+ AAE+  P  + L + +  L  RL N     +  K      L  
Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNKVTQLVNRLANAFKHDMSEKRAQALQLQH 301

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    L+    RLD L   L+  +   ++++ R  N++  R+        + +  
Sbjct: 302 RLNLCHPRNQLNQKAQRLDELSIALQQAMRNSLYQQERTLNNLTPRLMRQSPDKKLTQAS 361

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + + Q  + Q ++Q L+        +                                
Sbjct: 362 HQLAQLQTRLNQAIQQQLQQANNSLALQ-------------------------------- 389

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L S +  N L RGY+  +      +    ++     ++    
Sbjct: 390 ---------------ASRLDSVSPLNVLARGYSITKTDKQKVVKSVADVKVGDTLITELV 434

Query: 491 DGQANAIVIN 500
           DG  ++ V++
Sbjct: 435 DGTLHSQVLS 444


>gi|189424974|ref|YP_001952151.1| exodeoxyribonuclease VII large subunit [Geobacter lovleyi SZ]
 gi|189421233|gb|ACD95631.1| exodeoxyribonuclease VII, large subunit [Geobacter lovleyi SZ]
          Length = 454

 Score =  349 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 159/503 (31%), Positives = 248/503 (49%), Gaps = 61/503 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN F+++        +VS L+  LK ++E N S V   GE S      +SGH Y +LKD+
Sbjct: 1   MNLFAEQT-----ILTVSRLTSLLKDLIEDNFSQVWAEGEASNLT-YAASGHVYCTLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +  ++++ ++  ++F  EEG+  +V G+++ +    +YQ+I E   P G G L  A 
Sbjct: 55  GAMLRCVMFRSSVKALKFKLEEGMALVVRGRLSVYDQRGEYQLIAEYAEPKGLGALQAAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K++L  EGLFS+ HK P+PF+P+ + ++TS +GA I DIL  +  R   L +I++PV
Sbjct: 115 VQLKERLAGEGLFSESHKQPLPFMPQKVGIVTSASGAAIHDILNVLGRRNAGLHLIVYPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG     EIA AI  LN L         D++I+ RGGGS+EDLW FN+E++ RA+  S
Sbjct: 175 RVQGVGSAAEIAAAIDNLNRLNAA------DVLIVGRGGGSLEDLWAFNEELVARAVYRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETDWT+ D+ ADLRAPTP+ AAE+    +E L + + NL  RL+  I   
Sbjct: 229 RIPVISAVGHETDWTICDFVADLRAPTPSAAAELVCTAREELLNQIQNLVLRLDQAISSQ 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +K +I+ L  L +AL +  + L     R+D L   L+  L  +  R           +  
Sbjct: 289 LKLRIHNLAGLRRALHDPSRMLGHQLQRVDDLSERLDMALRNLFGRHREQLARQEQHLAG 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 I K RQ +L   +H E+ V   L  +  E+ E  A                   
Sbjct: 349 LHPAIQISKLRQKLLLLTEHAERRVTSQLEQLGRERGEATA------------------- 389

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRN 478
                                        L++ +  +TL RG++ + + T+ + I     
Sbjct: 390 ----------------------------RLEALSPLHTLARGFSVVERQTDKHIIRNAAE 421

Query: 479 LATKTRILINFFDGQANAIVINK 501
           LA    I +    G A   +   
Sbjct: 422 LAIGEEIRLRLHQGCALCRIEET 444


>gi|332289770|ref|YP_004420622.1| exodeoxyribonuclease VII large subunit [Gallibacterium anatis
           UMN179]
 gi|330432666|gb|AEC17725.1| exodeoxyribonuclease VII large subunit [Gallibacterium anatis
           UMN179]
          Length = 454

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YS+S+L+   K I+E  L  + + GEIS +     SGH YF+LKD ++++ A +++   
Sbjct: 10  IYSISQLNRLAKEILEQELGSLWLSGEISNFT-QPVSGHWYFTLKDKNAQVRAAMFRMRN 68

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P+ G++ +V   I+ +     YQII+ES+ P+G G L    E+ K KL  EGLF
Sbjct: 69  LRVNFKPQNGMQVVVRANISLYEPRGDYQIIVESMQPAGEGLLQQQFEQLKMKLAAEGLF 128

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + Q+K  IP   + I VITS +GA + DILQ +  R P L VII+P  VQG E  ++I  
Sbjct: 129 AQQYKKEIPAYCRKIGVITSASGAALHDILQILRRRNPTLEVIIYPTLVQGKEAAQDIVA 188

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   N   E       D++I+ RGGGS+EDLW FN+E++ RAI  S IPIISA+GHETD
Sbjct: 189 SIEIANKRHE------CDVLIVGRGGGSLEDLWCFNEEIVARAIFASQIPIISAVGHETD 242

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD+ ADLRA TP+ AAE+    ++ L   +  L+ RL       +   +  L  L  
Sbjct: 243 VTIADFVADLRASTPSAAAELLSRDQKELWQKIDYLQQRLEIAFTYKLNRYLQRLERLQL 302

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +    L   + +   L + L   +   + R+ +    +  R+    L   I+  +
Sbjct: 303 RLKNQHPQARLQLQQQQYLYLQQRLTQAIADYLQRRQQLQASLSQRLSQLPLTLQIETQQ 362

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   Q  ++  +                            + +    +  L  R    
Sbjct: 363 RTLNHWQTRLQTAINTF-------------------------LQHQQHKLANLGGR---- 393

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L + +    L+RGYT     +   ++  + +     I     
Sbjct: 394 ------------------LDNISPLKVLQRGYTVTTSLDTKLVSSIKQVTIGQEIATRTV 435

Query: 491 DGQANAIVINKAPPKEQP 508
           DG+  + +    P  ++ 
Sbjct: 436 DGKLISQITRIEPFADKK 453


>gi|47076768|dbj|BAD18311.1| exodeoxyribonuclease VII large subunit [Geobacillus
           stearothermophilus]
          Length = 448

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 145/498 (29%), Positives = 240/498 (48%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V  L+ ++K    V+ +L  + V+GEIS ++  HS GH YF+LKD+ +RI A+
Sbjct: 1   MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F PE+G+  LV G+I+ +  +  YQ+ ++ + P G G L  A E+ K++L
Sbjct: 60  MFAGYNQHLPFRPEDGMNVLVRGEISVYEPNGNYQLYVKEMQPEGIGRLYLAYEQLKQRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS  HK P+P  P+ I V+TSPTGA +RDI+  I  R+PL ++I+FP  VQGD  
Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKIILFPALVQGDGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI + N           D++I+ RGGGSIE+LW FN+E++ RAI  S +P+ISA
Sbjct: 180 ALSIVRAIERANEF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPVISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+A P    L   L   + R+   +   +      
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPHVGELAERLAERKWRMIRAMKEQLAASQER 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L  +       +       +LD L   L    E ++ +K + +  +  R+       
Sbjct: 294 LRRLQASYAFRYPRRLYEQKEQQLDVLLDRLARQRERLLDKKRQQWRELRLRLWRHHPAA 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++ ++        +E+ +                         +  +       +  +
Sbjct: 354 ELERMKERQKAAAGALEKAM-------------------------RTALERHALRFRSHV 388

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+                      ++ +    ++RGY+ + +     + +   L    R
Sbjct: 389 ARL----------------------EALSPLRIMERGYSLVYNERRELVKRIGQLQVGER 426

Query: 485 ILINFFDGQANAIVINKA 502
           + I   DGQ +  V    
Sbjct: 427 LSIRIQDGQVDCQVTGVE 444


>gi|332967828|gb|EGK06927.1| exodeoxyribonuclease VII large subunit [Kingella kingae ATCC 23330]
          Length = 449

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 133/489 (27%), Positives = 228/489 (46%), Gaps = 57/489 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+     ++++  S V + GEIS      +SGH YF+LKD+H+++   ++K T  
Sbjct: 10  LSVSELNQAADALLDNEFSDVWISGEISNLT-RAASGHYYFALKDDHAQVRCALFKFTAA 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++    +EG    V GKI  +    ++QI I  +   G G L    E+ K +L  EGLF 
Sbjct: 69  RLAVPLKEGDAVEVRGKIGIYGARGEFQITINEVRSLGLGQLFERYERLKARLQAEGLFD 128

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           +  K  +P  PK I ++TS   A +RD++  +  R P + +I++P  VQG    + IA A
Sbjct: 129 ESRKQTLPEHPKAIGIVTSLAAAALRDVVSTLKRRAPQIPIIVYPTPVQGAGSEQHIAQA 188

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I++ +  +E       D++I+ RGGGS+EDLW FN+E  V AIA  ++P++S +GHETD+
Sbjct: 189 IMRAHQRRE------VDVLIVCRGGGSLEDLWAFNEEATVCAIAACTLPVVSGVGHETDF 242

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD+ AD+RAPTPT AAE+  P +      +  L +R    + +  +Y    ++ L + 
Sbjct: 243 TLADFVADVRAPTPTAAAELVSPNRAEQLRHVQQLWSRAQQNMTQRYRYAAQKVDFLAQN 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  Q L+    +LD L ++L  +   ++ ++       +  ++      NIQ  +Q +
Sbjct: 303 LKHPQQKLAEQAKQLDFLAQKLHTSSLHLLAKQQYRVAQQVQILQHRRP--NIQNKKQQL 360

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              Q  +++ +   +                                             
Sbjct: 361 DWMQAALQRAMFGLIESRRQ---------------------------------------- 380

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                   +    +IL + +  N L+RGY  +Q      +    +L    ++ I   DG 
Sbjct: 381 -------QIDKQNQILNAMSPLNILQRGYAIVQTGRGQVVRDANDLRLGQKLAIRLADGA 433

Query: 494 ANAIVINKA 502
            +  V  + 
Sbjct: 434 VDVQVAKQQ 442


>gi|170723358|ref|YP_001751046.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida W619]
 gi|169761361|gb|ACA74677.1| exodeoxyribonuclease VII, large subunit [Pseudomonas putida W619]
          Length = 463

 Score =  348 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 231/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 66  AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKEKLGAEGLFSAERKRPLPAHPQRIGIISSPTGAVIRDIISVFGRRAPQVELNLVPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   ++L         D +ILARGGGS+EDLW FN+E + RAIA   
Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAIAACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L+ RL   +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLEGLQRRLLLRMQNRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L SL + L +  + L     RLD L   L       + ++      +  R+ + 
Sbjct: 299 AHDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFLQSLNQRRERLARLDTRLAAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                ++   Q +    + + + +                                   +
Sbjct: 359 HPGRTLKLLSQRLDSLAERLPRAM--------------------------------REVL 386

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K    R +  L                 LQ  +   TL RGY+ + D     I       
Sbjct: 387 KDRRQRFQAQLQT---------------LQVVSPLATLARGYSILLDERGQAIRSAEQTR 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 NGQRLTARLNEGELQVRVED 451


>gi|288576179|ref|ZP_05978329.2| exodeoxyribonuclease VII, large subunit [Neisseria mucosa ATCC
           25996]
 gi|288566114|gb|EFC87674.1| exodeoxyribonuclease VII, large subunit [Neisseria mucosa ATCC
           25996]
          Length = 449

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 135/507 (26%), Positives = 235/507 (46%), Gaps = 62/507 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V GKI+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG F+ + K P+P   + I ++TS   A +RD++  +  R P + VI++P 
Sbjct: 115 ERLKAQLQAEGAFAAERKKPLPARAQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 AVQGAGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  ++ + 
Sbjct: 229 AIPVASGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  L+ L + + +  Q L   R  + +L + L +++   +      F      +K 
Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRTYIQKLAQTLSYSMTQNVRAHTARFERQTQALKH 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                ++ +                                            I    T 
Sbjct: 349 CRPDISVYRQ------------------------------------------DIDRFQTT 366

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +     ++       + +        T +L++ + +  L+RG++ +++T    I     L
Sbjct: 367 LSHAFRQLLAQRRQSLTAQ-------TALLEAVSPQQILERGFSVVKNTRGQVIRNANAL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
               ++ I F +G+ +  V  +   +E
Sbjct: 420 KQGQKLHIIFAEGETDVRVTKEQAQRE 446


>gi|85859628|ref|YP_461830.1| exodeoxyribonuclease VII large subunit [Syntrophus aciditrophicus
           SB]
 gi|85722719|gb|ABC77662.1| exodeoxyribonuclease VII large subunit [Syntrophus aciditrophicus
           SB]
          Length = 466

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 158/501 (31%), Positives = 253/501 (50%), Gaps = 64/501 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG-- 71
             +VSEL+  ++ ++E+    + V GE+S  R   SSGH YF+LKD  S+I A+I++   
Sbjct: 20  ILTVSELNEKIRDLLEARFDLLWVEGEVSNLR-RPSSGHIYFTLKDEKSQIRAVIFRFLP 78

Query: 72  -----TLNKIEF-LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
                  N++ F   EEG++     ++  +    +YQ+I++SL P G+G L  A E+ K 
Sbjct: 79  GSRPFRNNRLPFFDLEEGMQITCRARLAVYAPRGEYQLILDSLEPRGTGALQKAYEQLKA 138

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF    K PIP++P+ I VITSPTGAVIRDIL   + RFP + ++I PV+VQG 
Sbjct: 139 RLQAEGLFDASRKKPIPYLPRRIGVITSPTGAVIRDILNITARRFPSVSLVIAPVRVQGP 198

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E P+EI  AI  L++L+E       D++ILARGGGS+EDL  FNDE + RAIA+SS+P+I
Sbjct: 199 EAPREIVQAIQDLHSLEE------VDVLILARGGGSLEDLSAFNDESVARAIASSSLPVI 252

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD+T+AD+AAD+RAPTP+ AAE+AVP +  L + L    +RL  ++IR +  + 
Sbjct: 253 SAVGHETDFTIADFAADVRAPTPSTAAELAVPNRNDLTAWLAGTRSRLYTLLIRSMTQRR 312

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L    + L +  + ++  R  LD         ++  +  + ++      R++    + 
Sbjct: 313 EQLVRCRERLKDPQRVITGLRLALDDHRERGRLIIQQRLSAEKQNILLQRLRLQQAGPLR 372

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  R ++ + ++ +                                            
Sbjct: 373 RIRDTRLNVEDMEKRLISSC---------------------------------------- 392

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKT 483
            R+       +     S +++   + S +    L+RGY+  +       I     L    
Sbjct: 393 -RLN------LDRARKSWTVSATRVDSLSPLAVLERGYSIARTLPGGRIIRDVAMLKIGD 445

Query: 484 RILINFFDGQANAIVINKAPP 504
            + +    G+  A V    P 
Sbjct: 446 SLELRVRKGRLEAEVTRIIPE 466


>gi|332992295|gb|AEF02350.1| exonuclease VII, large subunit [Alteromonas sp. SN2]
          Length = 451

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/501 (27%), Positives = 231/501 (46%), Gaps = 58/501 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           F+   S      +V++L+   + ++ES +  + +  EIS +    +SGH YF+LKDN ++
Sbjct: 2   FTSSPSTSRQILTVTKLNRLARTVLESEVGLIWLSAEISNFVS-AASGHWYFTLKDNKAQ 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A ++K T   ++  P+EG + LV   +  +     YQ++IE +   G G L  A E  
Sbjct: 61  VRAAMFKNTNRGVKQRPKEGDKVLVRASVGIYEARGDYQLVIEHMESDGEGALQQAYEAL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLFS   K P+P +   I VITS TGA + D+L  +  R P   VI++P  VQ
Sbjct: 121 KAKLNAEGLFSIDRKRPMPEVINRIGVITSSTGAALHDVLSVLKRRSPQTEVIVYPSMVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+  P ++ NA+   N   E       D ++L RGGGS+EDLW FN+E + R IA S +P
Sbjct: 181 GETAPNQLINALRTANQRNE------VDALLLTRGGGSLEDLWCFNNENLAREIAESQLP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHE D+T+AD+ ADLRAPTP+ AAE+       L  SL+  + RL   +++ + +
Sbjct: 235 LISAVGHEVDFTIADFVADLRAPTPSAAAEILSQDTNALSESLVQYKQRLTRAMLQKLSH 294

Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                    + L   +    +      LDRL   L H +   +  + + F  + NR+   
Sbjct: 295 LAQQHKLQHQRLQSVHPQSKIQNQWQALDRLQLRLSHAINNKLAIENKRFESVDNRLARQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + +  +++  + +   +K                                   
Sbjct: 355 NPTVRVNQAKARMIQTHKALCNNMK----------------------------------- 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                         + S   + +    +LQS +  +TL RGY+    ++   +T    + 
Sbjct: 380 ------------QLVNSKQQAFAAKVGLLQSVSPLSTLSRGYSITM-SSGKAVTSVDTVK 426

Query: 481 TKTRILINFFDGQANAIVINK 501
               ++    DG+  + ++  
Sbjct: 427 ENDILMSRVTDGEITSKIVEI 447


>gi|313109192|ref|ZP_07795160.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           39016]
 gi|310881662|gb|EFQ40256.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           39016]
          Length = 462

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 139/505 (27%), Positives = 224/505 (44%), Gaps = 60/505 (11%)

Query: 1   MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M P          LD    +VS+L+   + ++E     V V GE+S      +SGH YF+
Sbjct: 1   MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD++++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L
Sbjct: 60  LKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A E  K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + 
Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           + P  VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA
Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +A  + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   
Sbjct: 233 VAACTTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +   +  +   L  + + L +  + L     RLD L   L    E  +  ++     +  
Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+ +      +   RQ +      + +  ++ LR                          
Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAREALRDRR----------------------- 389

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                                     +    + L   +   TL RGY+ + D     I  
Sbjct: 390 ------------------------QRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425

Query: 476 KRNLATKTRILINFFDGQANAIVIN 500
                   R+     +G+    V +
Sbjct: 426 AGQTQPGQRLKARLAEGELEVRVED 450


>gi|171913357|ref|ZP_02928827.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobium spinosum
           DSM 4136]
          Length = 445

 Score =  347 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 145/491 (29%), Positives = 236/491 (48%), Gaps = 53/491 (10%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               SVS+L+  ++ ++E  +  V V GEIS +R   SSGH YF+LKD  ++I  ++++G
Sbjct: 2   SSVLSVSQLTRQIRSLLEGQIGDVSVEGEISNHRLQ-SSGHQYFTLKDEGAQISCVLFRG 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              +++    +G++  + G++T +     YQII+ S+ P G G+L    E  K+KL  EG
Sbjct: 61  ASARMQTPLRDGMQVQLFGELTVYEQRGNYQIIVRSVQPKGQGSLQARFEALKQKLAGEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF +  K PIP  P+++A++TSPTGA IRD+L  ++ R P LRV++FPV+VQG    +EI
Sbjct: 121 LFENHWKKPIPKFPRVVALVTSPTGAAIRDMLNILTRRAPWLRVLVFPVRVQGQGAEQEI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI  LN   E    PRPD I++ RGGGS+EDLW+FN+E++ RAI  S+IP+ISA+GHE
Sbjct: 181 ARAIDLLNQ--EVAGLPRPDTIVVGRGGGSLEDLWNFNEEVVARAIFASTIPVISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLN 308
            D+T+AD+ AD+RAPTP+ AAE+  P    LQ     +E  + + +   +++      L 
Sbjct: 239 IDFTIADFVADMRAPTPSAAAELLAPDTAELQRHFDAMEKSMTHRMRTTLEHHERVLELT 298

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++ L  +   +D +        E+               ++       + +
Sbjct: 299 GKGALRREPERLLRDAVQSVDEVESSYHRAQELYWRSLDDRLVQHHRALEKYHPQRVLTE 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
               +   QQH+   +                                            
Sbjct: 359 AAHRVALIQQHLGAFI-------------------------------------------- 374

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                +I+     V    ++L+S    + L RG++   D     I     L T   ++  
Sbjct: 375 ---RQRIEQNAQKVMAMRKLLKSMGPDSVLSRGFSMTTDATGKVIEDASKLRTGDMMITR 431

Query: 489 FFDGQANAIVI 499
              G+  ++V 
Sbjct: 432 LAKGKVASVVT 442


>gi|107103296|ref|ZP_01367214.1| hypothetical protein PaerPA_01004365 [Pseudomonas aeruginosa PACS2]
          Length = 462

 Score =  347 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/505 (27%), Positives = 224/505 (44%), Gaps = 60/505 (11%)

Query: 1   MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M P          LD    +VS+L+   + ++E     V V GE+S      +SGH YF+
Sbjct: 1   MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD++++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L
Sbjct: 60  LKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A E  K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + 
Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           + P  VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA
Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +A  + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   
Sbjct: 233 VAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +   +  +   L  + + L +  + L     RLD L   L    E  +  ++     +  
Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+ +      +   RQ +      + +  +                              
Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAR------------------------------ 382

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                + L  R               +    + L   +   TL RGY+ + D     I  
Sbjct: 383 -----EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425

Query: 476 KRNLATKTRILINFFDGQANAIVIN 500
                   R+     +G+    V +
Sbjct: 426 AGQTQPGQRLKARLAEGELEVRVED 450


>gi|126653063|ref|ZP_01725198.1| exodeoxyribonuclease VII large subunit [Bacillus sp. B14905]
 gi|126590164|gb|EAZ84288.1| exodeoxyribonuclease VII large subunit [Bacillus sp. B14905]
          Length = 452

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 142/502 (28%), Positives = 240/502 (47%), Gaps = 60/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V  L+ ++K   +   +L  V V+GE+S  + IH SGH YF+LKD+ +RI A 
Sbjct: 2   SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K+ F P+EG++  + G +  + G   YQ+ ++ + P G G+L  A  + K++L
Sbjct: 61  MFKTAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF  + K  IP  P+ I V+TS TGA IRDI   +  R+PL  ++I+P  VQG + 
Sbjct: 121 QKEGLFKLEWKQSIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I + N            ++I+ RGGGSIEDLW FN+E++ RAI +S IPIISA
Sbjct: 181 APNIVQNIQRANQ------EATCQVLIVGRGGGSIEDLWAFNEEIVARAIFDSRIPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADY +DLRAPTPT AAEMAVP +  L   +++ +++++ ++   +  +   
Sbjct: 235 VGHETDTTIADYVSDLRAPTPTAAAEMAVPDQAELFQRVLSQKSQIHQMVRSQLMAERQR 294

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN L +   L   ++       RL +    L+  +++ + +K      + + +       
Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQFESGLQTAMQVDLMKKSAQLQQLHSTVAQHSPKK 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +  +++ +  + Q + +    +                                     
Sbjct: 355 ALAFHQRELEARMQQLTRATTYY------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +         T R L++    + L RG+T     +   I    ++  +  
Sbjct: 378 ----------VAKQQQQFEATIRTLEALNPLSILTRGFTVAY-KDQQMIKSSTDVQKQDH 426

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F DG+  A V +  P  E
Sbjct: 427 LTLTFHDGKVVAEVKDILPKNE 448


>gi|329924767|ref|ZP_08279756.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. HGF5]
 gi|328940432|gb|EGG36755.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. HGF5]
          Length = 456

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 146/491 (29%), Positives = 234/491 (47%), Gaps = 60/491 (12%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV +L+ +++  +E +  LS V +RGEIS +   HSSGH YF+LKD  SRI AI++  
Sbjct: 9   VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 67

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F+P+EG   +  G ++ +    +YQ     + P G G+L  A E+ K KL EEG
Sbjct: 68  HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKSKLEEEG 127

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P  PK I VITSPTGA +RDI+  I  R+P    I++PV VQG      I
Sbjct: 128 LFAADRKRPLPRYPKTIGVITSPTGAAVRDIMITIRRRYPQANTILYPVLVQGKGAAPSI 187

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N + E       D++I+ RGGGS+E+LW FN+E++ RAI  S IP++SA+GHE
Sbjct: 188 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARAIYQSHIPVVSAVGHE 241

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRA TPT AAE+AVP    L+  L   + +LN  + + ++     L SL
Sbjct: 242 TDFTIADFVADLRAATPTAAAELAVPSSAELRGQLAQRQRQLNQGLQQRLQRSRERLISL 301

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +   L +  + +     RLD L + L+ +L+  +    +    +   +         + 
Sbjct: 302 QRSPVLVHPRRYMLQHAERLDMLSQRLQGHLKSRLSLVRQRQKSLHQGLIRYNPRTQAEF 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +   +  + +   ++  ++                                       
Sbjct: 362 AAKRKEQANRQLMNAMQSIMKSKM------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487
                      + +    R L + +    + RGY+ + D      +    ++     + +
Sbjct: 386 -----------SQLQTEMRHLDALSPLKIMSRGYSLVYDEKEQKLVKSIEDVQLGDLVNV 434

Query: 488 NFFDGQANAIV 498
              DGQ    V
Sbjct: 435 RVNDGQLQCQV 445


>gi|261405953|ref|YP_003242194.1| exodeoxyribonuclease VII large subunit [Paenibacillus sp. Y412MC10]
 gi|261282416|gb|ACX64387.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp.
           Y412MC10]
          Length = 456

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 148/491 (30%), Positives = 235/491 (47%), Gaps = 60/491 (12%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV +L+ +++  +E +  LS V +RGEIS +   HSSGH YF+LKD  SRI AI++  
Sbjct: 9   VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 67

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F+P+EG   +  G ++ +    +YQ     + P G G+L  A E+ K KL EEG
Sbjct: 68  HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKSKLEEEG 127

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P  PK I VITSPTGA +RDI+  I  R+P    I++PV VQG      I
Sbjct: 128 LFAADRKRPLPRYPKTIGVITSPTGAAVRDIMITIRRRYPQANAILYPVLVQGKGAAPSI 187

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N + E       D++I+ RGGGS+E+LW FN+E++ RAI  S IPI+SA+GHE
Sbjct: 188 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARAIYQSHIPIVSAVGHE 241

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRA TPT AAE+AVP    L+  L   + +LN  + + ++     L SL
Sbjct: 242 TDFTIADFVADLRAATPTAAAELAVPSSAELRGQLAQRQRQLNQGLQQRLQRSRERLISL 301

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +   L +  + +     RLD L + L+ +L+  +    +H   +   +         + 
Sbjct: 302 QRSPVLVHPRRYMLQHAERLDMLSQRLQGHLKSRLSLVRQHQKSLHQGLIRYNPRTQAEF 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +   +  + +   ++  ++                                       
Sbjct: 362 AAKRKEQANRQLMNAMQSIMKSKM------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487
                      + +    R L + +    + RGY+ + D      +    ++     + +
Sbjct: 386 -----------SQLQTEMRHLDALSPLKIMSRGYSLVYDEKEQKLVKSIEDVQLGDLVNV 434

Query: 488 NFFDGQANAIV 498
              DGQ    V
Sbjct: 435 RVNDGQLQCQV 445


>gi|94269423|ref|ZP_01291459.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1]
 gi|93451227|gb|EAT02130.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1]
          Length = 445

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/497 (29%), Positives = 241/497 (48%), Gaps = 55/497 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
               +N  D+   +VSEL+  ++ ++E++ + V V GEIS  R   +SGH YF+LKD H+
Sbjct: 2   EADMENPFDNRIQTVSELTRSIRGLLETSYNMVTVSGEISNLR-RPASGHLYFTLKDAHA 60

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  +++KG    +   P +G+E L  G+++ +    +YQ+I++ +   G+G L  A ++
Sbjct: 61  QLRGVLFKGQQRYLACNPADGLEVLCRGRLSVYEPRGEYQLIVDFMDGKGAGLLRVAFDR 120

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKV 181
            K KL  EGLF    K P+PF+P+ IA++TSP GA +RD L +     P   + I PV+V
Sbjct: 121 LKAKLEAEGLFEPARKKPLPFLPRRIALVTSPQGAAVRDFLTQAGKLCPFTAIEIMPVRV 180

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD    EIA+AI QLN  +        +II+L RGGGS+EDLW FN+E + RAIA S I
Sbjct: 181 QGDGAAAEIADAIHQLNERQ------SSEIIVLCRGGGSLEDLWAFNEEAVARAIAASQI 234

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SA+GHE D+T+AD  ADLRAPTPT AA + +P  E L +    L  RL   + R + 
Sbjct: 235 PVVSAVGHEVDYTIADLVADLRAPTPTAAARLILPDGEQLLAQARELSHRLAAAMRRHLL 294

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                L +  + L +  + L+    RLD L  +L   L+  +  + +      + ++   
Sbjct: 295 EARRRLEAEQRLLRDPARGLAQHAIRLDYLRADLARALQGRLRHRRQRLLAWEHALQRLD 354

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               +  +R  + E Q  +                                         
Sbjct: 355 PRRRLTAHRAMLQENQLRL----------------------------------------S 374

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L+ ++     +++            IL++ +    L RGY   +  +   +   +  A 
Sbjct: 375 FLMRQLLSGRRNQLSR-------AAAILEAVSPLAVLGRGYAIARRPDGTILRSVKEAAP 427

Query: 482 KTRILINFFDGQANAIV 498
              + +   DG  + ++
Sbjct: 428 GAPLRLTLHDGDLHCVI 444


>gi|87198197|ref|YP_495454.1| exodeoxyribonuclease VII large subunit [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133878|gb|ABD24620.1| Exodeoxyribonuclease VII large subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 453

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 177/505 (35%), Positives = 260/505 (51%), Gaps = 53/505 (10%)

Query: 25  KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84
           K  VE     V VRGE+SG +   +SGH Y  LKD ++R+D ++W+G   ++ F PE+G+
Sbjct: 2   KRTVEDRFGFVRVRGELSGVK-RAASGHLYLCLKDENARLDGVMWRGNAQRLNFRPEDGV 60

Query: 85  EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144
           E +  GK+TT+PG S YQI+I+ +  +G G LL  L K K +L  EGLF    K  +PF+
Sbjct: 61  EVIATGKLTTYPGRSNYQIVIDRMEIAGEGALLALLAKLKARLEGEGLFDPARKKALPFL 120

Query: 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGR 204
           P+ I V+TSPTGAVIRDIL R+S RFP RVI++PV VQG     ++ANA+   + ++ G 
Sbjct: 121 PRTIGVVTSPTGAVIRDILHRLSDRFPCRVIVWPVLVQGQGAAAQVANAVRGFSAMEPGG 180

Query: 205 TCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRA 264
             PRPD++I+ARGGGSIEDLW FN+E +VRA+A+ +IPIISA+GHETD TL D+AADLRA
Sbjct: 181 PIPRPDLVIVARGGGSIEDLWSFNEEEVVRAVADCTIPIISAVGHETDTTLCDFAADLRA 240

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
           PTPT AAE+AVPV+  L + + +L AR    + R +      L +  + LP     L   
Sbjct: 241 PTPTAAAELAVPVQAELAAFVADLNARQRRALGRQLGQARERLEARSQRLPQPHALLQGQ 300

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             R+D L   L   L                 ++   L   + + R+ +  ++   E ++
Sbjct: 301 AQRVDDLGDRLRLALLHRTEIAASQLARHAGALRPALLSARVDRERERLAARRLRPEALL 360

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
                                      RI +    +                        
Sbjct: 361 --------------------------QRIDHARGKVD----------------------A 372

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
             R+ +S   +  L+RGY  + D++ + +  +   AT+  + + F DG  +  V   APP
Sbjct: 373 LDRLRRSLNPEAPLERGYVLVTDSDGHLVKDRATAATRAALTLKFADGTLD--VSTGAPP 430

Query: 505 KEQPTKKCQLHNNKREKQGTQGELF 529
                 +      +  +   Q ELF
Sbjct: 431 PAGS--RSASKPRQAARPEGQQELF 453


>gi|330894504|gb|EGH27165.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 456

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 135/500 (27%), Positives = 234/500 (46%), Gaps = 60/500 (12%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPFA-RLGLDREVLTVSQLNGRARVVLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +   +    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 62  AQVRCALFRQSAAHVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAV   I+     R P + + + P  
Sbjct: 122 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAV---IISVFRRRAPRVELTLIPTA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 179 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 231

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +L  RL + +   +
Sbjct: 232 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 291

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+ + 
Sbjct: 292 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 351

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +++ ++   L+ +                        
Sbjct: 352 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 387

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + L   +   TL RGY+ + D   + I       
Sbjct: 388 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 424

Query: 481 TKTRILINFFDGQANAIVIN 500
           T  R+     +G+    V +
Sbjct: 425 TGQRLTARLGEGELQVRVED 444


>gi|167464894|ref|ZP_02329983.1| exodeoxyribonuclease VII large subunit [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382775|ref|ZP_08056619.1| exodeoxyribonuclease VII large subunit-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153244|gb|EFX45690.1| exodeoxyribonuclease VII large subunit-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 455

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 153/495 (30%), Positives = 235/495 (47%), Gaps = 61/495 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SV EL+ ++K  +ES+  L  V VRGEIS +   HSSGH YF+LKD  SR+ +I+
Sbjct: 5   ERKILSVKELNRYMKMKLESDSVLQDVWVRGEISNFTH-HSSGHMYFTLKDKDSRLKSIM 63

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +     ++ F P+EG   L  G I+ +    +YQ  ++ + P G G L  A E+ KKKL 
Sbjct: 64  FASQNQRLSFRPKEGTMVLARGNISVYERDGQYQFYVQQMQPDGMGNLYLAFEQLKKKLE 123

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+ + K PIP  PK I V+TSPTGA +RDI+  +  RFP + V ++PV VQG +  
Sbjct: 124 SEGLFALERKKPIPKYPKAIGVVTSPTGAAVRDIIITLQRRFPSVPVYLYPVLVQGAQAA 183

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI  +N   E       D++I+ RGGGS+E+LW FN+E++ R+I  S+IP+ISA+
Sbjct: 184 PSITKAIDAMNRDGE------VDVLIVGRGGGSLEELWAFNEELVARSIFASAIPVISAV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ ADLRA TPT AAE+AVP K  LQ  L     RL+  +++ ++   + L
Sbjct: 238 GHETDFTIADFVADLRAATPTAAAELAVPHKLELQQQLDQYRQRLHQGLLKRLERGRDRL 297

Query: 308 NSLLK--ALPNSDQTL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L +     +  + L      RLDR+  +L   ++  +         +  R+ +     
Sbjct: 298 ERLRRSPFFVHPRRQLTQQPLERLDRVREQLAFRMQKKLSAAGDCHLRLEKRLSAFNPKE 357

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   R+                                                     
Sbjct: 358 QVVYARR-----------------------------------------------CSDAAG 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKT 483
             +   +    KS    +    R L + +    ++RGY+ + D      I     +    
Sbjct: 371 RALILAIQGIYKSNRRELGAVMRQLDALSPLKVMQRGYSLVYDEQEKQLIKSLDQVQIGD 430

Query: 484 RILINFFDGQANAIV 498
            + I   DG+    +
Sbjct: 431 VVKIKLTDGRLGCHI 445


>gi|296387710|ref|ZP_06877185.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           PAb1]
          Length = 459

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E     V V GE+S      +SGH YF+LKD++
Sbjct: 4   DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A  +
Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACT 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  ++     +  R+ + 
Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + +  ++ LR                               
Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAREALRDR----------------------------- 385

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +    + L   +   TL RGY+ + D     I       
Sbjct: 386 ------------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLKARLAEGELEVRVED 447


>gi|221133877|ref|ZP_03560182.1| exodeoxyribonuclease VII, large subunit [Glaciecola sp. HTCC2999]
          Length = 450

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 139/505 (27%), Positives = 226/505 (44%), Gaps = 58/505 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                S      SV++L+  +  ++++++  V +  EIS +    +SGH YF+LKD  ++
Sbjct: 1   MYTSTSTQRNILSVAKLNKMVGSLLKTHVGQVWISAEISNFVA-AASGHWYFTLKDRDAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A ++KG   +I   P+EG   LV   +  +     YQII+E L   G+G L    E+ 
Sbjct: 60  VKAAMFKGANGRIAQRPKEGDSVLVRANVGLYEPRGDYQIIVEHLEFDGAGLLKQQYEQL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K  L  EGLF+ Q K  IP   K + +ITS TGA + DI   +  R P + VI++P +VQ
Sbjct: 120 KNALQAEGLFATQTKQAIPQDIKTVGIITSATGAALHDITTVLKRRNPMINVIVYPTQVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     +I NAI   N  +E       D++I+ RGGGS+EDLW FN+E + RAI  S +P
Sbjct: 180 GAAAAAQIVNAIFIANRRRE------VDVLIVGRGGGSLEDLWCFNEETVARAIFGSHLP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D T+AD+ ADLRA TP+ AAE+       +  ++     RL   I   +  
Sbjct: 234 IVSAVGHEVDVTIADFVADLRAATPSQAAELVSSDLGDVIYTIEQWRQRLTQAISTKLNE 293

Query: 303 K--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L        +  Q L      +D    +L+HN++  +    +   H+ NR++  
Sbjct: 294 CDYQQQLLGSRLQQNHPQQRLQQQAQAIDHFTMQLQHNMQRRLQVAQQRQQHLENRLQHL 353

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
             IH + +++QH     + + Q                                      
Sbjct: 354 SPIHLVSQSQQHTHTLTERLRQA------------------------------------- 376

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                     +++++       +  T IL S +   TL RGY+     +N+ +     + 
Sbjct: 377 ----------MANRLTHQQQRFAKVTGILHSVSPLATLSRGYSISF-VDNHVVNTTSTIK 425

Query: 481 TKTRILINFFDGQANAIVINKAPPK 505
               +     DG+  + V   +  K
Sbjct: 426 EGDTLTTRLTDGEVTSKVERISAVK 450


>gi|221310353|ref|ZP_03592200.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221319600|ref|ZP_03600894.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323876|ref|ZP_03605170.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp.
           subtilis str. SMY]
          Length = 448

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LK+   R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKERKGRMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I       E       D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  + R+ I   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 433 DGVLTCEVLEKRGEEK 448


>gi|224369659|ref|YP_002603823.1| XseA [Desulfobacterium autotrophicum HRM2]
 gi|223692376|gb|ACN15659.1| XseA [Desulfobacterium autotrophicum HRM2]
          Length = 452

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 56/503 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            + +     ++VS+L+  +K ++E   + V + GEIS    + +SGHAYFSLKD+++ I 
Sbjct: 2   AQANNFRQIFTVSKLTREIKTLIEERFTLVWITGEISNL-SLPASGHAYFSLKDSNAVIS 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            +I++  L ++ F PE G++ + +G+++ +     YQ+I E + PSG+G L  A E+ K 
Sbjct: 61  GVIFRNQLRRLGFKPENGMKIIGMGRLSLYEPRGSYQLIFEHMEPSGTGALQAAFEQLKH 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184
           KL  EGLF +  K  +PF+P+ I+++TSPTGAVI+DI+     RF  + + I PVKVQG+
Sbjct: 121 KLALEGLFDEDRKQRLPFLPERISIVTSPTGAVIQDIINVSKRRFSNIPLEIVPVKVQGE 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               EIA AI  +N           D+II+ARGGGS+EDL  FN E + RA+  S+IPII
Sbjct: 181 GADLEIAKAIALINQRAVS------DLIIVARGGGSLEDLVAFNSETVARAVFESAIPII 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD+T+ D+AAD+RAPTP+ AAE+A+P K  L S L +L A L   I++      
Sbjct: 235 SAVGHETDFTITDFAADVRAPTPSAAAELALPEKSALFSRLTDLRAFLVRTIVQRQALIR 294

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             +  L   L +  + +   R++L+ L   +   +E          +   + + ++    
Sbjct: 295 ERIMELTARLKDPKRAVDDLRFKLEDLESRMTGLIEKRTAACRERLDWFTHALFANSPER 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++K R++I  +   +   +                            +       K+L 
Sbjct: 355 QVKKERENINTRVTQLVAAITTT-------------------------LEGRRGRTKELT 389

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKT 483
            R                      L++ +    L RGY+  +       +     +    
Sbjct: 390 AR----------------------LEALSPMGVLDRGYSITRTLPEKTVLMDSTGIEIDK 427

Query: 484 RILINFFDGQANAIVINKAPPKE 506
            + +    G+    V      ++
Sbjct: 428 TVEVILARGRLYCQVKKINGKEK 450


>gi|311069031|ref|YP_003973954.1| exodeoxyribonuclease VII large subunit [Bacillus atrophaeus 1942]
 gi|310869548|gb|ADP33023.1| exodeoxyribonuclease VII large subunit [Bacillus atrophaeus 1942]
          Length = 448

 Score =  345 bits (886), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 135/496 (27%), Positives = 239/496 (48%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L  + ++GE+S  + IH+ GH YF+LKD ++R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ARLPFKPESGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLANEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            ++HK  IP  P  I V+TSPTGA +RD++  +  R+P +++I+ P  VQG+   + I  
Sbjct: 127 DERHKKTIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKIIVLPALVQGENASRSIVK 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I + N  +        D++I+ RGGGSIE+LW FN+E++ R+I +S IPIISA+GHETD
Sbjct: 187 RIEEANEKQM------CDVLIVGRGGGSIEELWAFNEEIVARSIFSSRIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L   +   E R+   + + I  K   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERIKTAEVRITRAMQQHISQKKERIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  +  RK R       R+ +      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQTQLTSLFERKNRQLERETYRLAALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   ++   + + +   ++ +                                       
Sbjct: 361 KRHEDRTNQLTRSMNIQIKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +    ++ +   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-ELIKSISQVEENDQLEVKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ +    +
Sbjct: 433 DGVLTCEVLERRGEAK 448


>gi|307544211|ref|YP_003896690.1| exodeoxyribonuclease VII large subunit [Halomonas elongata DSM
           2581]
 gi|307216235|emb|CBV41505.1| exodeoxyribonuclease VII large subunit [Halomonas elongata DSM
           2581]
          Length = 453

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 136/503 (27%), Positives = 230/503 (45%), Gaps = 55/503 (10%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S      SV  L+ + + ++ES +  + V  E+SG     +SGH YF+LKD H+++   
Sbjct: 2   SSTAEQPLSVEALNRNARQLLESGIGEIWVEAELSGV-SRPASGHVYFTLKDEHAQLRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     +     +G    V G+++ F     +Q+I E++ P+G G LL A E+ K KL
Sbjct: 61  LFRTRARFVTAPMRDGDRVKVRGRVSLFEPRGNFQLIAEAVQPAGEGELLAAFERLKAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EG+F++     +PF P+ + V+TSPTGA IRD+L  ++ R+PL +V + PV VQG E 
Sbjct: 121 DAEGVFANARP--LPFPPRHLLVLTSPTGAAIRDVLAVLAARWPLSQVTLIPVPVQGREA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+  LN        P  D I++ RGGGS+EDLW FNDE + RAI +S +P++SA
Sbjct: 179 APALIAALGLLNRQSILD--PERDAILITRGGGSLEDLWAFNDEHLARAIFHSRLPVMSA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D TLAD+AAD RAPTP+ AAE  VP                              
Sbjct: 237 VGHEVDVTLADFAADSRAPTPSAAAERLVPDA---------------------------- 268

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                          +  R RL +L   L  +    +  + +  +H+  R++       +
Sbjct: 269 ---------------AALRQRLVQLEERLIRSQRARLDTQGQRLDHLRARLR--HPGEVL 311

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              R+ + + +  + + +   L      ++     L       + ++      +     R
Sbjct: 312 AYRRRQLEQLEGRLHRAMNAGLAERRERERHLRQRLT--LRSPQRQVEQAEQRLTLAARR 369

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++  +   +      ++  +R LQ+ +    L RGY  ++      I +  +     R+ 
Sbjct: 370 LQQSMPRALARHRERLAAVSRELQAVSPLAILGRGYAILESPEGRVIKRTGDTRPGERLE 429

Query: 487 INFFDGQANAIVINKAPPKEQPT 509
               +GQ    V+   P  E P 
Sbjct: 430 ARLGEGQLTLEVL--PPSSESPA 450


>gi|288553329|ref|YP_003425264.1| exodeoxyribonuclease VII large subunit [Bacillus pseudofirmus OF4]
 gi|288544489|gb|ADC48372.1| exodeoxyribonuclease VII large subunit [Bacillus pseudofirmus OF4]
          Length = 450

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 153/495 (30%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+L+ ++K I+E +  L+ V +RGEIS ++ +HS GH YF++KD +SRI A+++ G  
Sbjct: 8   SVSQLTRYIKGIMEHDHILTDVWIRGEISNFK-LHSRGHMYFTIKDQNSRIQAVMFAGHN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ L+ G++  +    +YQ+  + + P G G+L  A EK K+ L EEGLF
Sbjct: 67  RYLAFKPENGMKVLIRGEVNVYEPYGQYQLYAKEMQPDGVGSLFLAYEKLKETLQEEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            +  K PIP  PK IA++TSPTGA I+D+L  +  R+PL ++ + PV VQG E P  I  
Sbjct: 127 DESRKRPIPRFPKKIAIVTSPTGAAIKDMLATLKRRYPLAQITLLPVLVQGQEAPASIVR 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+ Q N         + D +I+ RGGGSIE+LW FNDE + R I  S++P+ISA+GHETD
Sbjct: 187 AVNQANAA------NQFDTLIVGRGGGSIEELWAFNDEGVARCIVASTVPVISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ ADLRAPTPTGAAE+AVP    L  S   L  RL   +   I+     L  L +
Sbjct: 241 FTISDFVADLRAPTPTGAAELAVPDVAELLHSRQVLHNRLKRQMKLKIEEHQEQLKRLKR 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       Q +      LD     L+   +  +  K + F  I   ++       I+  +
Sbjct: 301 SYAFRYPLQLIRQKEQELDTQLERLQRASKRHMSDKQQQFQLIEKALQRLHPKGQIKDAQ 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + +K+  +E+ +                                  H+ +   R    
Sbjct: 361 SGLKDKKLRLEKSMT--------------------------------QHLSRHEQR---- 384

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINF 489
                       +     L   +    ++RGY+          +   + +    ++ +  
Sbjct: 385 -----------FNHVVSELNLLSPLRIMERGYSLAYTEGKEELVKSIQQVDAGQKVEVRV 433

Query: 490 FDGQANAIVINKAPP 504
            DG     V +K   
Sbjct: 434 TDGVIYCQVEDKQSK 448


>gi|1303917|dbj|BAA12573.1| YqiB [Bacillus subtilis]
          Length = 448

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 60/496 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K    V+ +L ++ ++GE+S  + IH+ GH YF+LK+   R+ ++++    
Sbjct: 8   TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKERKGRMQSVMFARQS 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G++ LV G I+ +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            D++K  IP  P  I V+TSPTGA +RD++  +  R+P ++VI+ P  VQG+   + I  
Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I       E       D++I+ RGGGSIE+LW FN+E++ RAI  S+IPIISA+GHETD
Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RA TPTGAAE+AVP    L       E R+   + + +  +   + +L  
Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQEKGRIQTLQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +  +    + D   ++ +  L  ++ RK R       R+++      +++ R
Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               E+   + + +   ++ +                                       
Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L + +    ++RGY+     +   I     +  + R+ I   
Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432

Query: 491 DGQANAIVINKAPPKE 506
           DG     V+ K   ++
Sbjct: 433 DGVLTCEVLEKRGEEK 448


>gi|34499019|ref|NP_903234.1| exodeoxyribonuclease VII large subunit [Chromobacterium violaceum
           ATCC 12472]
 gi|34104869|gb|AAQ61226.1| exodeoxyribonuclease, VII large subunit [Chromobacterium violaceum
           ATCC 12472]
          Length = 454

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/492 (27%), Positives = 232/492 (47%), Gaps = 57/492 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                   SVS L+   + ++E+ +  V + GEIS    + +SGHAYFSLKD  ++I  +
Sbjct: 7   PDQSQDVISVSSLNRMARDLLEAGIPPVWIGGEISNLT-LAASGHAYFSLKDGGAQIRCV 65

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++  L+ + F P+EG++  + G++T +    ++QI +  +  +G G L  A E+ K +L
Sbjct: 66  MFRHKLSLLPFRPQEGMQVELRGQVTLYEARGEFQINVGEMRAAGLGRLYEAFERLKARL 125

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF +  K  +P  P  I ++TSP  A +RD++  +  R P + +I++P +VQG+  
Sbjct: 126 QAEGLFDNARKRELPAHPAAIGIVTSPAAAALRDVVSTLRRRMPGIPLILYPTQVQGEGS 185

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            ++IA+A+               D++I+ RGGGSIEDLW FN+E++ RA+A S IP +S 
Sbjct: 186 ARQIADALRL------AGERREVDVLIVCRGGGSIEDLWSFNEEIVARAVAASPIPTVSG 239

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ AD RAPTPT AAE+  P +EHL   L   +  L   + RL+  K   
Sbjct: 240 VGHETDFTICDFVADRRAPTPTAAAELVSPNREHLAIQLEQTKRALERALSRLLTDKTQQ 299

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L+ L + L +    L   R RLD L   L   ++    +          R+       ++
Sbjct: 300 LDFLGRRLTHPGARLQVQRERLDALSSALGQRVQAAFEQGRWRLQLAGTRLSRHQP--DL 357

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              +Q + ++Q  + +                                           R
Sbjct: 358 DVGKQALRQRQAALLRA----------------------------------------RDR 377

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +    + ++     +++           +  L RGY  +Q  +   +     LA + ++ 
Sbjct: 378 LLERRAQQLAQLAATLTA-------LNPEAVLARGYAIVQKQDGRAVKNPAELADREKVT 430

Query: 487 INFFDGQANAIV 498
           +   +G A A +
Sbjct: 431 LRLAEGSAEARI 442


>gi|217327167|ref|ZP_03443250.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. TW14588]
 gi|217319534|gb|EEC27959.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7
           str. TW14588]
          Length = 430

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/482 (29%), Positives = 221/482 (45%), Gaps = 57/482 (11%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  V + GEIS +    +SGH YF+LKD+ +++   +++ +  ++ F P+ G + LV   
Sbjct: 1   MGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRAN 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           IT +     YQII+ES+ P+G G L    E+ K KL  EGLF  Q+K P+P     + VI
Sbjct: 60  ITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDLQYKKPLPSPAHCVGVI 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS TGA + DIL  +  R P L VII+P  VQGD+ P +I  AI   N       C   D
Sbjct: 120 TSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQ------CNECD 173

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+GHETD T+AD+ ADLRAPTP+ A
Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAA 233

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-- 328
           AE+    ++ L   + +   RL   +   +  +      +   L      L  +R +   
Sbjct: 234 AEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTML 293

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           +RL + +   LE  + R  +    +  R+        I + +  I + +  + +      
Sbjct: 294 ERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAE------ 347

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                                                     L  ++ +           
Sbjct: 348 -----------------------------------------TLRAQLSATRERFGNAVTH 366

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           L++ +  +TL RGY+    T+   + + + +     +     DG   + V N  P K+  
Sbjct: 367 LEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEMLTTRLEDGWVESEVKNIQPVKKSR 426

Query: 509 TK 510
            K
Sbjct: 427 KK 428


>gi|315646329|ref|ZP_07899449.1| exodeoxyribonuclease VII, large subunit [Paenibacillus vortex V453]
 gi|315278528|gb|EFU41844.1| exodeoxyribonuclease VII, large subunit [Paenibacillus vortex V453]
          Length = 461

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 151/491 (30%), Positives = 235/491 (47%), Gaps = 60/491 (12%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV +L+ +++  +E +  LS V +RGEIS +   HSSGH YF+LKD  SRI AI++  
Sbjct: 14  VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 72

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F+P+EG   +  G ++ +    +YQ     + P G G+L  A E+ K KL EEG
Sbjct: 73  HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKAKLEEEG 132

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+   K P+P  PK I VITSPTGA +RDI+  I  R+P  R I++PV VQG      I
Sbjct: 133 LFAADRKRPLPLYPKTIGVITSPTGAAVRDIMITIRRRYPQARTILYPVLVQGKGAVPSI 192

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N + E       D++I+ RGGGS+E+LW FN+E++ R I  S IP+ISA+GHE
Sbjct: 193 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARVIYQSDIPVISAVGHE 246

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRA TPT AAE+AVP    L+  L+  + +LN  + + +K     L SL
Sbjct: 247 TDFTIADFVADLRAATPTAAAELAVPSSAELKGQLVQRQRQLNQGLQQRLKRSRERLASL 306

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +   L +  + +     RLD L + L  NL+  +    +    +   +         + 
Sbjct: 307 QRSPVLVHPRRYMLQHAERLDMLSQRLHGNLKSQLSLSRQRQKSLHQGLIRYNPRTQAEF 366

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +   +  + +   ++                                           
Sbjct: 367 AARRKDQANRQLMNAMQ------------------------------------------- 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487
            I+  ++    T      R L + +    + RGY+ + D      +    ++     + +
Sbjct: 384 SIMKSRLSQLQTE----MRHLDALSPLKIMSRGYSLVYDEKEQRLVKSLEDVQLGDLVNV 439

Query: 488 NFFDGQANAIV 498
              DGQ    V
Sbjct: 440 RVSDGQLQCQV 450


>gi|293376578|ref|ZP_06622806.1| exodeoxyribonuclease VII, large subunit [Turicibacter sanguinis
           PC909]
 gi|292644804|gb|EFF62886.1| exodeoxyribonuclease VII, large subunit [Turicibacter sanguinis
           PC909]
          Length = 447

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 149/495 (30%), Positives = 235/495 (47%), Gaps = 59/495 (11%)

Query: 14  EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +V  L+ ++K   +   NL H+ ++GEIS ++  HS GH YF+LKD+ ++I+A+++  
Sbjct: 6   PLTVKALTKYIKLKFDYDKNLQHLLLKGEISNFK-RHSRGHFYFTLKDDEAQINAVMFAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             +++ F+P+EG++ +V G I  +     Y + ++ +   G G L  A  + K++L  EG
Sbjct: 65  AASQVSFMPKEGMQVVVKGHIAVYEAGGSYSLYVKEMTEDGIGNLYVAFTQMKERLGAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  + K PIP  P  I VITSPTGA IRD+L  I  RFP ++V ++P  VQG++    I
Sbjct: 125 LFDARFKQPIPPFPHAIGVITSPTGAAIRDVLSTIKRRFPLVKVYVYPALVQGEQAAPSI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I Q N LK+       D +I+ RGGGSIEDLW FN+E++ RAI  S IPIISA+GHE
Sbjct: 185 VKCIQQANELKQ------VDTLIVGRGGGSIEDLWAFNEEIVARAIFESKIPIISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ AD RAPTPTGAAE+AVP    +   L  L  RLN+      + K   L+ L
Sbjct: 239 TDFTIADFVADHRAPTPTGAAEIAVPNVVDVLKHLNQLNVRLNHNFNVQFEQKKQWLSQL 298

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                + N           + +L  +L++ L+  + ++ +      NR+        +  
Sbjct: 299 SNHYIMKNPHALFEQRLVYVSQLNDKLQYQLQQQLRKRQQILMMHSNRLIQHNPKQRVMN 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + ++  + Q L                                        
Sbjct: 359 YQHQLEYLSKALQSGMNQELANQKQHY--------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                          +    L      + LK+GYT   +  N  +T    ++   ++ + 
Sbjct: 386 --------------GLLLTKLDMLNPMSILKKGYTVTTNEKNEMVTSVSQVSVGQKVTVA 431

Query: 489 FFDGQANAIVINKAP 503
           F DG   A V     
Sbjct: 432 FDDGSFVAEVDEIKS 446


>gi|15598972|ref|NP_252466.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           PAO1]
 gi|14194725|sp|Q9HXL8|EX7L_PSEAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|9949948|gb|AAG07164.1|AE004796_9 exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           PAO1]
          Length = 459

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E     V V GE+S      +SGH YF+LKD++
Sbjct: 4   DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A  +
Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  ++     +  R+ + 
Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + +  +                                   
Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           + L  R               +    + L   +   TL RGY+ + D     I       
Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLKARLAEGELEVRVED 447


>gi|270290383|ref|ZP_06196608.1| exodeoxyribonuclease VII, large subunit [Pediococcus acidilactici
           7_4]
 gi|304384738|ref|ZP_07367084.1| exodeoxyribonuclease VII large subunit [Pediococcus acidilactici
           DSM 20284]
 gi|270281164|gb|EFA26997.1| exodeoxyribonuclease VII, large subunit [Pediococcus acidilactici
           7_4]
 gi|304328932|gb|EFL96152.1| exodeoxyribonuclease VII large subunit [Pediococcus acidilactici
           DSM 20284]
          Length = 447

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 155/502 (30%), Positives = 240/502 (47%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +    +VS L+ ++K    V+  L  V V GEIS +R    +GH YFS+KD  ++I+ I
Sbjct: 2   TNDQYLTVSALTQYIKRKFDVDPYLHRVYVVGEISNFRLR-VNGHQYFSIKDEQAKINVI 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F PEEG+  +V G+I+ +PG+  YQ+ ++S+ P G G L  A E+ K KL
Sbjct: 61  MFKSAFAKVKFQPEEGMRVIVSGRISVYPGNGSYQLYVDSMQPDGVGALYQAYEQLKAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  IP  PK IAV+TS +GAVIRDI+  +  R+P +++++FPV VQG+E 
Sbjct: 121 DKEGLF-KAPKQAIPRFPKKIAVVTSRSGAVIRDIITTVKRRYPIVQLVLFPVAVQGNEA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              IA  I  +NTL      P  D IIL RGGGSIEDLW FN+E++ RAI  S IP IS+
Sbjct: 180 APNIAAQIKFINTL------PDFDTIILGRGGGSIEDLWPFNEEVVARAIFESRIPTISS 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+A PV   + + L   E R+ N    ++K K   
Sbjct: 234 VGHETDTTIADLVADVRAATPTAAAELATPVLTDVLTDLQKTELRVINAFKNILKIKQQQ 293

Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                         +        +D+L   L +  +  +  +      + +R+  +   +
Sbjct: 294 ARQLENSYIFQEPQRLYEGYVQNVDQLTERLRNAQKQYLADRSAELVKLQHRLLVNNPQN 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +    Q +   ++ +                                       +  + 
Sbjct: 354 QVDLATQKVGYLREQL---------------------------------------LSVIT 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R     +                L + +    + RGYT +   +   +     L+    
Sbjct: 375 RRFTQSQTQM--------QKLVAALDNLSPLRIMSRGYTYVT-KDEQVVNSVEKLSVNDA 425

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I +NF DG A+AI+      ++
Sbjct: 426 IKLNFSDGSADAIIKTINNEEK 447


>gi|331701509|ref|YP_004398468.1| exodeoxyribonuclease 7 large subunit [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128852|gb|AEB73405.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus buchneri NRRL
           B-30929]
          Length = 447

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 160/503 (31%), Positives = 257/503 (51%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           + +   +VS L+ ++K    V+  L+ V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MANDYLTVSALTKYIKRKFDVDPYLTKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   N+++F+PEEG++ LV+G I+ +  S  YQI +E + P G G L  A E+ K+KL
Sbjct: 60  MFKSAFNRLKFIPEEGMKVLVVGHISVYEPSGSYQIYVEQMEPDGVGQLYQAYEQLKQKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+   + P+   PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG E 
Sbjct: 120 STEGLFNLPKQ-PLAKFPKRIAVVTSPSGAVIRDIITTVRRRYPIAQIVLFPALVQGTEA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I ++N +         D +I+ RGGGSIEDLW FN+E + RAI  S IP+IS+
Sbjct: 179 SADIVRQIERVNQI------GNFDTLIVGRGGGSIEDLWPFNEENVARAIVASKIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVP  + +   L   + R+ N   ++++     
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVDLRTTQNRIINATYQVVQQDKQR 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L +        +       RLD L + L +  + I  ++   F+ +  R++     +
Sbjct: 293 LKRLRQSTVFTTPQRIYETFAQRLDLLTQRLYNQSDKITGKRKDRFSDLKLRLRLVAPTY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ +Q +   +  + +   Q+L+ +    +                            
Sbjct: 353 TIREEQQKLATLKGRLNRATTQNLKNVSQHYQM--------------------------- 385

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    L RGYT   D   +FI +  +L++K  
Sbjct: 386 --------------------LVGSLDHLSPLKILSRGYTYTTDEQGHFIKRVADLSSK-T 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           I ++F DG  NA V      KE+
Sbjct: 425 IDVHFSDGIVNASVNQINAKKEK 447


>gi|134095670|ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herminiimonas
           arsenicoxydans]
 gi|189037845|sp|A4G7Y7|EX7L_HERAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|133739573|emb|CAL62624.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Herminiimonas arsenicoxydans]
          Length = 453

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 136/501 (27%), Positives = 229/501 (45%), Gaps = 58/501 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P   +    +   +VS L+  +  ++E +     + GEIS +    +SGH YF+LKD+ +
Sbjct: 6   PNPNQTPTSN-VLTVSALNQAVSRMLERSFPLTWIAGEISNFT-RAASGHWYFTLKDDAA 63

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++ A++++G     +F+P EG    V   +T +     YQ+ +E++  +G G L  A  +
Sbjct: 64  QVRAVMFRGRAQYTDFMPREGDRVEVRALVTLYAPRGDYQLSVEAIRRAGVGNLYEAFLQ 123

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K+KL  EGLF    K P+P   + I ++TSP  A +RDIL  +  R P +R I++P  V
Sbjct: 124 LKEKLATEGLFDPARKRPLPLFARTIGIVTSPQAAALRDILTTLQRRAPHVRAILYPTPV 183

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+    +IA AI   +   E       D++++ RGGGSIEDLW FN E++ R I    I
Sbjct: 184 QGEGAANKIAQAIATASARAE------CDVLLVCRGGGSIEDLWSFNHEIVARTIVGCDI 237

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I  +GHETD+T+AD+AAD+RAPTPT AAE+A   +    + L      +   + R + 
Sbjct: 238 PVIVGVGHETDFTIADFAADVRAPTPTAAAELAATPRTEWLARLQTEADDMRRALKRQLS 297

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
               TL+ L + L +   T++  + +L  L   L H   I + +      H+ NR  +  
Sbjct: 298 DTAQTLDWLSRRLISPSATIAHKQMKLQNLQARLGHATRIPLGKAQFALAHLRNRWLTQL 357

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               IQ+ R  + E  + +                           Q K R       ++
Sbjct: 358 PDTRIQRAR--VAEHARRLS-------------------------NQMKTRSATQEQRLR 390

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L  ++                      +    + TL+RGY  + D   + +   + L  
Sbjct: 391 ALSAQL----------------------EMLNPQRTLERGYAIVSDEKGHIVRAPQELRP 428

Query: 482 KTRILINFFDGQANAIVINKA 502
           +  + +   +G A   + +  
Sbjct: 429 RQNVTVRLAEGSAQIGIASVQ 449


>gi|163790198|ref|ZP_02184631.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. AT7]
 gi|159874473|gb|EDP68544.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. AT7]
          Length = 446

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 150/502 (29%), Positives = 234/502 (46%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           + +   +V+ L+ ++K   E +  L  + + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MSNDYLTVTALTRYIKRKFERDPYLDRIYLTGEISNFRNRPNA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F PEEG++ LVIG+IT +  S  YQI IE + P G G L  ALE+ KKKL
Sbjct: 60  MFKPAFQKLKFTPEEGMKVLVIGRITLYEASGNYQITIEHMEPDGVGALYQALEEMKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF    +  IP  PK IAVITSP+GAV+RDI+  I  RFP ++++I+P  VQG + 
Sbjct: 120 RHEGLFDAPKQL-IPTFPKRIAVITSPSGAVVRDIMTTIKRRFPIVQLVIYPTLVQGTKA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I ++I  +            D +I+ARGGGSIEDLW FN+E++ RAI  +  PIIS+
Sbjct: 179 AEAIVSSIRMV------EEKGDFDTMIIARGGGSIEDLWPFNEEIVARAIFEAQTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE++VP+       +  L+ RL     R ++     
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELSVPLLSDELIKIDQLKLRLVQSYARKVENLNQR 292

Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L             +       +LD L   L  ++E    +     N    ++ +     
Sbjct: 293 LAGHLSSYIFNQPQRLYEGYAQKLDLLTERLIRSMEEKNQQLKNELNVHTLQLNAQNPAQ 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++    +    + +   ++ ++                                    
Sbjct: 353 LVKQKYSDLTVMDRQLTTQMEWYMENQT-------------------------------- 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                 + L   +    L RGY+     +   I   + +    +
Sbjct: 381 ---------------KRFHYAVQSLDYLSPLKILNRGYSYAT-KDGKVIKDSKQVDVDDK 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I I+   G   A VI K    +
Sbjct: 425 IHIHLHKGNFEAKVIKKEEESK 446


>gi|39996866|ref|NP_952817.1| exodeoxyribonuclease VII large subunit [Geobacter sulfurreducens
           PCA]
 gi|81832034|sp|Q74CA7|EX7L_GEOSL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|39983754|gb|AAR35144.1| exodeoxyribonuclease VII, large subunit [Geobacter sulfurreducens
           PCA]
 gi|298505879|gb|ADI84602.1| exodeoxyribonuclease VII, large subunit [Geobacter sulfurreducens
           KN400]
          Length = 447

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 149/491 (30%), Positives = 242/491 (49%), Gaps = 56/491 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VS+L+  ++ ++E N  HV V GE+S      +SGH YF+LKD  ++I  ++++ + 
Sbjct: 9   ILTVSQLTSLIRGVLEENFEHVWVEGEVSNL-ATPASGHLYFTLKDGAAQIRCVMFRASS 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P +G+  +V G++T +    +YQ+++E L P G G L  A  + K++L  EGLF
Sbjct: 68  RALKFRPRDGMGLIVRGRVTVYDQRGEYQLLVEYLEPRGIGALQLAFIQLKEQLAREGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
           +D+HK PIP +P+ I V+TS TGA I DIL  ++ RF  + ++I PVKVQG+   +EIA 
Sbjct: 128 ADEHKKPIPPLPQKIGVVTSATGAAIHDILTVLNRRFANVEILIRPVKVQGEGAAEEIAA 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS+EDLW FN+EM+ RAI  S IP+ISA+GHE D
Sbjct: 188 AIDDFNR------YGVIDVMIVGRGGGSLEDLWAFNEEMVARAIHRSRIPVISAVGHEVD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTP+ AAE+ V  KE L + L  L  RL     +++  +   L+SL +
Sbjct: 242 FTIADFVADLRAPTPSAAAELVVKSKEELAARLEFLRHRLVQGGRQVLAERRGELDSLNR 301

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L +    +     R+D L   LE      + R     + +   ++       +++ R+ 
Sbjct: 302 SLRDPSMLVGHLSQRVDDLSARLERGTANSVRRHRGSLDLLTTNLRLTNPAVRLERARER 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           ++      E +                                               L 
Sbjct: 362 VIALAGRNETL-----------------------------------------------LR 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFD 491
             +        +    L + +   T+ RGY+ +        +T    LA   R+ +    
Sbjct: 375 RFLDHLREKTLVAAARLDTLSPLATMARGYSIVLKLPERCLVTDSARLAPGDRVELCLRR 434

Query: 492 GQANAIVINKA 502
           G+A   V + +
Sbjct: 435 GRAGCCVESSS 445


>gi|223043160|ref|ZP_03613207.1| exodeoxyribonuclease VII, large subunit [Staphylococcus capitis
           SK14]
 gi|222443371|gb|EEE49469.1| exodeoxyribonuclease VII, large subunit [Staphylococcus capitis
           SK14]
          Length = 445

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/492 (29%), Positives = 243/492 (49%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVTTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLTKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K PIP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDSSVKKPIPKFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQIHISTLVQGTQAKQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   +TL         D II+ RGGGSIEDLW+FN+E +V+AI + + PIISA+GHET
Sbjct: 184 EKIEHADTL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIYSCNTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   +  L   I + ++ +   LN L 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYVEQQKKQLNHLN 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L ++L+  +   + +  ++   +        L +NI ++
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQLMSTYLEKHTQNLKLLKQHFNLKTLNNNISQD 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           + H+ + ++ + Q +                                       +++++ 
Sbjct: 357 KMHVSQYRERMTQAITNE------------------------------------LSKLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L +KI++           L + +  NT+ RGY  + + ++  +T   ++     I +  
Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDITENDTITLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGNVDATVKKV 440


>gi|288560069|ref|YP_003423555.1| exodeoxyribonuclease VII large subunit XseA [Methanobrevibacter
           ruminantium M1]
 gi|288542779|gb|ADC46663.1| exodeoxyribonuclease VII large subunit XseA [Methanobrevibacter
           ruminantium M1]
          Length = 508

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 151/517 (29%), Positives = 247/517 (47%), Gaps = 38/517 (7%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V++L+YH+K +V  +S+L +V VRGE+S ++    SGH YF+LKD +S I  I
Sbjct: 1   MEEEYLTVTKLNYHIKRLVNSDSSLKNVYVRGELSNFKRYP-SGHLYFTLKDQNSEIGGI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  ++++F P+ G++ L+ G +  +P    Y+I  + L   G G L  A E+ K+KL
Sbjct: 60  MFKGPASRLKFEPKNGMKVLINGYVDVYPKQGNYKIYAQKLTEDGIGDLYIAYEQLKRKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
              G F D+HK  IP  PK + V+T+ TGA IRDI+  I  R+PL  +I+FP  VQG+  
Sbjct: 120 SALGWFDDEHKQEIPKFPKRVGVVTASTGAAIRDIVITIKRRWPLCEIILFPSLVQGNMA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           PK I   I+              D +I+ RGGGSIEDLW FNDE + + I  S  PIISA
Sbjct: 180 PKNIIKQIIL------ADNEFDLDTLIIGRGGGSIEDLWAFNDETLAKVIFFSKTPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE DWT++DY ADLRA TPT AAE+AVP    ++S++ NL+ RLN +I +      ++
Sbjct: 234 VGHEIDWTISDYVADLRAATPTAAAELAVPDINEIESNIKNLDDRLNKVIDKQFNENKDS 293

Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                      N D   +     LD     L    + +I+      +++ + +       
Sbjct: 294 FEKLVNRNLFKNPDLLYNKKIMYLDSAKSRLAVCSKNMIYDNKIRVSNVKSSLIFKNPKM 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             +       + + ++    K  +     +  +       + +              K+ 
Sbjct: 354 LFESKSNKYNQLKYNLNSSGKILIGKKESKLDKYRNSF--VFKSPNRLFESKANRYFKVR 411

Query: 425 TRIEFILSHKIKSCHT-----------------------SVSITTRILQSFAYKNTLKRG 461
           T +E+   + ++                            +      L      NTLKRG
Sbjct: 412 TNLEYSSINLLRDKKDNLNEIKKSNPIKNPQSILEPNEIRLDKYIDKLDVLNPLNTLKRG 471

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           YT +   +   +++ +++     + + F DG  +  V
Sbjct: 472 YT-VSRVDGKVVSKAKDVKKDDILEVEFDDGNVSTKV 507


>gi|310642664|ref|YP_003947422.1| exodeoxyribonuclease 7 large subunit [Paenibacillus polymyxa SC2]
 gi|309247614|gb|ADO57181.1| Exodeoxyribonuclease 7 large subunit [Paenibacillus polymyxa SC2]
          Length = 455

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 150/491 (30%), Positives = 234/491 (47%), Gaps = 60/491 (12%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YS+ +L+ +++  +ES+  LS V +RGEIS +   HSSGH YF+LKD  SRI +I++  
Sbjct: 7   IYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRSIMFAT 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F+P+EG   +  G ++ +    +YQ     + P G G+L  A E+ K+KL  EG
Sbjct: 66  HNRRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGIGSLYLAYEQLKQKLDAEG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K  +P  P  I VITSPTGA +RDI+  +  R+P   ++++PV VQG      I
Sbjct: 126 LFDTARKRNLPAHPATIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKGAAPSI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N ++E        ++I+ RGGGS+E+LW FN+E + RAI  S IP+ISA+GHE
Sbjct: 186 VKAIEAMNRMQE------VQVMIVGRGGGSLEELWAFNEEAVARAIYASVIPVISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINTLN 308
           TD+T+AD+ ADLRA TPT AAE+AVP +  L+  L+  E RL N + + ++   +     
Sbjct: 240 TDFTIADFVADLRAATPTAAAELAVPHQGELRDQLLQREQRLRNALRQRLEASRERLLRL 299

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L +  + +     R+D L + L                 +   ++       I+ 
Sbjct: 300 RRSPVLLHPRRYMLQHAERMDMLHQRLIRAAANRSRLNAEKNARMRQVLERFNPREQIRS 359

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+     Q+ +E  ++              AI    R+Q    I               
Sbjct: 360 ARKQTDMAQRQLESAMR--------------AITKTGRQQLHTGI--------------- 390

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487
                             R L + +    + RGY+ + D      I   +++     I I
Sbjct: 391 ------------------RQLDALSPLKVMARGYSLVYDEQEKRLIKSLKDVQPGDSIKI 432

Query: 488 NFFDGQANAIV 498
              DGQ +  V
Sbjct: 433 KVSDGQLDCQV 443


>gi|260583698|ref|ZP_05851446.1| exodeoxyribonuclease VII, large subunit [Granulicatella elegans
           ATCC 700633]
 gi|260158324|gb|EEW93392.1| exodeoxyribonuclease VII, large subunit [Granulicatella elegans
           ATCC 700633]
          Length = 446

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 153/498 (30%), Positives = 236/498 (47%), Gaps = 63/498 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS L+ ++K+  +   +L  V + GEIS +R   +  H YFSLKD ++ I A 
Sbjct: 1   MSEEYVTVSALTKYIKYKFDKDPHLGRVYLTGEISNFRLRPT--HQYFSLKDENAIISAT 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    KI+F PEEG++ LVIGK++ F  S +YQI IE + P G G L  A E+ KKKL
Sbjct: 59  MFQSAFKKIQFRPEEGMKVLVIGKVSVFEKSGQYQINIEHMEPDGVGALYLAYEQLKKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLFS   K PIP  PK IA++TS +GAVI+DI   ++ RFP ++++++P  VQG   
Sbjct: 119 EAEGLFSLPKK-PIPQFPKKIAILTSESGAVIQDIQTTVARRFPIVQLVLYPTVVQGVHA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   +  +            D++I+ RGGGSIEDLW FN+E +VR +A  SIP+IS+
Sbjct: 178 VNSILKNLDLV-------EKEDYDVVIIGRGGGSIEDLWAFNEEPVVRRVAELSIPVISS 230

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D+ +D+RA TPT AAE+A PV   +   L NL+ RL   + R ++ K   
Sbjct: 231 VGHETDTTLIDFVSDMRAATPTAAAEIATPVLMEIHQQLRNLQTRLEQALSRQLQIKRER 290

Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           + +        N ++     + R+D+L   L+  ++  +                     
Sbjct: 291 MQALANASIFQNPERIYQVYQQRVDQLEMRLQQMMQQSVQ-------------------- 330

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
                RQ +++ Q  +E                              R+      ++ L 
Sbjct: 331 ---HKRQQLVKNQHRLE------------------------LGSPSRRVQTEKQALQYLA 363

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+E      +K          + L   +    + RGY  +Q      I     L     
Sbjct: 364 KRLEQAQGQLMKDKKQQFQRAIQQLDLLSPLKIMNRGYGILQQEE-TIIKSVDQLEVNQE 422

Query: 485 ILINFFDGQANAIVINKA 502
           + I   DG   + V +  
Sbjct: 423 LTIQLVDGTVRSKVTSVE 440


>gi|218889939|ref|YP_002438803.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           LESB58]
 gi|226697597|sp|B7UXJ1|EX7L_PSEA8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|218770162|emb|CAW25924.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           LESB58]
          Length = 459

 Score =  344 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 226/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E     V V GE+S      +SGH YF+LKD++
Sbjct: 4   DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K  +P  P+ I +++SP+GAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAGEGLFASERKRLLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A  +
Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  ++     +  R+ + 
Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + +  +                                   
Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           + L  R               +    + L   +   TL RGY+ + D     I       
Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLKARLAEGELEVRVED 447


>gi|313497393|gb|ADR58759.1| XseA [Pseudomonas putida BIRD-1]
          Length = 463

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 66  AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   ++L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L+  L  L+ RL   I   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRIQNRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L SL + L +  + L     RLD L   L     + + ++      +  R+ + 
Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N++   Q +    + + + +++              +L   R++ + ++       
Sbjct: 359 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 397

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 NGQRLTARLNEGELLVRVED 451


>gi|325916954|ref|ZP_08179196.1| Exodeoxyribonuclease VII large subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325536805|gb|EGD08559.1| Exodeoxyribonuclease VII large subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 445

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 128/492 (26%), Positives = 224/492 (45%), Gaps = 60/492 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NQQILTPSQLNTLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRSRLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K P+P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD     
Sbjct: 124 GLFDAERKQPLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSA--- 180

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
              A    + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 181 ---AAQVTSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +    AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRARARIAQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + R +   R+L  ++  ++ R          R+ +     N  
Sbjct: 298 LALRLRAHSPQARLQLLQRRQEDAGRQLRAHMSQLLERLQARVQRGQTRLTAHNPQRN-- 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                +   QQ +  +                                            
Sbjct: 356 -----LANLQQRLRAVHP------------------------------------------ 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +  +  +++     +    R L++ +   T+ RGY  +    + + +    ++    R+ 
Sbjct: 369 QAAMQRRLQHDQLRLRGLVRSLEAVSPLATVARGYAIVTRPADGSVVRSAADVTPGERLR 428

Query: 487 INFFDGQANAIV 498
               DG     V
Sbjct: 429 AQLADGSIAVRV 440


>gi|218885230|ref|YP_002434551.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756184|gb|ACL07083.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 511

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 122/510 (23%), Positives = 203/510 (39%), Gaps = 72/510 (14%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V EL+  ++  VE     V VRG++S      +SGH YF+LKD  + ++ + ++G  
Sbjct: 13  IYTVGELTRAIRAAVEGGFPFVWVRGQVSNL-SRPASGHCYFALKDEDAVLNCVWFRGNQ 71

Query: 74  N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
                                +      G E L  G++T +P    YQ+++E    +G G
Sbjct: 72  RDAEHFDPMTGEVFEDGPRPGLARTMANGQELLCAGRLTVYPPRGGYQLVVEMAQDAGLG 131

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLR 173
            L    E  K +L E G F    K P+P  PK +AVIT+P+GA +RD L+    R +   
Sbjct: 132 RLHAQFEALKARLAERGYFDAARKRPLPRHPKRVAVITAPSGAAVRDFLRMADERGWGCE 191

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           + I PV VQGDE P  IA A+ ++      +      +++L RGGGS+EDLW FNDE + 
Sbjct: 192 IRIHPVPVQGDEAPPRIAAALAEVVAQGWAQ------VVVLIRGGGSLEDLWAFNDERVA 245

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
            A+  S +P+++ IGHE D T+AD  AD+RA TPT AA++  P +               
Sbjct: 246 TAVFGSPLPVLAGIGHEVDHTMADMTADVRAATPTHAAQLLWPER--------------- 290

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
                                            R+D L   L   +E    R       +
Sbjct: 291 ----------------------------RELAQRVDELEMALTRGMERRFARLDEQLGAL 322

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
              +        + +  +   +    + +     +       +   A   + R       
Sbjct: 323 ARGLAWLSPERALARLDERFADAAARLGRA--WEMLARRDAARLDAADAALTRTLGPEAW 380

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473
                 +  L  R+ +     +      +      L +      L+RGY+ ++  +  F+
Sbjct: 381 ERRERAVDALEARLRWAGERAVTGREHELERCALRLDALDPLRPLERGYSLVRRADGGFL 440

Query: 474 TQKRNLATKTRILINFFDGQANAIVINKAP 503
                +A+   + +   DG+ +  V    P
Sbjct: 441 RSVAEVASGDALAVLVRDGEVDVTVRGARP 470


>gi|325839360|ref|ZP_08166799.1| exodeoxyribonuclease VII, large subunit [Turicibacter sp. HGF1]
 gi|325490480|gb|EGC92796.1| exodeoxyribonuclease VII, large subunit [Turicibacter sp. HGF1]
          Length = 447

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 149/495 (30%), Positives = 235/495 (47%), Gaps = 59/495 (11%)

Query: 14  EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +V  L+ ++K   +   NL H+ ++GEIS ++  HS GH YF+LKD+ ++I+A+++  
Sbjct: 6   PLTVKALTKYIKLKFDYDKNLQHLLLKGEISNFK-RHSRGHFYFTLKDDEAQINAVMFAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             +++ F+P+EG++ +V G I  +     Y + ++ +   G G L  A  + K++L  EG
Sbjct: 65  AASQVSFMPKEGMQVVVKGHIAVYEAGGSYSLYVKEMTEDGIGNLYVAFTQMKERLGAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  + K PIP  P  I VITSPTGA IRD+L  I  RFP ++V ++P  VQG++    I
Sbjct: 125 LFDARFKQPIPPFPHAIGVITSPTGAAIRDVLSTIKRRFPLVKVYVYPALVQGEQAAPSI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I Q N LK+       D +I+ RGGGSIEDLW FN+E++ RAI  S IPIISA+GHE
Sbjct: 185 VKCIQQANELKQ------VDTLIVGRGGGSIEDLWAFNEEIVARAIFESKIPIISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ AD RAPTPTGAAE+AVP    +   L  L  RLN+      + K   L+ L
Sbjct: 239 TDFTIADFVADHRAPTPTGAAEIAVPNVVDVLKHLNQLNVRLNHNFNVQFEQKKQWLSQL 298

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                + N           + +L  +L++ L+  + ++ +      NR+        +  
Sbjct: 299 SNHYIMKNPHALFEQRLVYVSQLNDKLQYQLQQQLRKRQQILMMHSNRLIQHNPKQRVMN 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + ++  + Q L                                        
Sbjct: 359 YQHQLEYLSKALQSGMNQELANQKQHY--------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                          +    L      + LK+GYT   +  N  +T    ++   ++ + 
Sbjct: 386 --------------GLLLTKLDMLNPMSILKKGYTVTTNDKNEMVTSVSQVSVGQKVTVA 431

Query: 489 FFDGQANAIVINKAP 503
           F DG   A V     
Sbjct: 432 FDDGSFVAEVDEIKS 446


>gi|222151416|ref|YP_002560572.1| exodeoxyribonuclease VII large subunit homolog [Macrococcus
           caseolyticus JCSC5402]
 gi|222120541|dbj|BAH17876.1| exodeoxyribonuclease VII large subunit homolog [Macrococcus
           caseolyticus JCSC5402]
          Length = 445

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 227/493 (46%), Gaps = 61/493 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ ++K   + +  L+ V ++GE+S ++  HSSGH YF+LKDN   I  +++
Sbjct: 5   EKYLSVSALTRYIKTKFDKDPYLTEVYIKGELSNFK-RHSSGHLYFALKDNDGVISCMMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K    ++ F P+EG   L+ G+++ + G   YQ+    +   G G L   LE  KKK  E
Sbjct: 64  KRDAAQLTFSPKEGDSVLITGRVSVYEGRGNYQLYATDIRLDGIGVLYERLEALKKKYFE 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           +G F+ ++K  +P  P+ IAV+T+ TGA ++DI   +S R+PL  V      VQG+    
Sbjct: 124 KGYFNVENKKQLPKYPEHIAVLTASTGAAVQDIRTTLSSRYPLAEVTYISTIVQGEAAKD 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I N +   + L         D+II+ RGGGSIEDLW FN+E +V AI   + P+ISA+G
Sbjct: 184 DIVNNLNTADQL-------GADVIIVGRGGGSIEDLWAFNEEGVVEAIYACNTPVISAVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TL+D  AD RAPTPT AA MA P    L   L  ++  +   + + IK     LN
Sbjct: 237 HETDTTLSDLVADHRAPTPTAAAVMATPDSRELLVGLKQVDITMLRTMNQRIKRNNERLN 296

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L       N    +     +LD     ++     +I +   +F+ I N+I +  L   +
Sbjct: 297 YLSSYYIFKNPYMLIEQKMQKLDDFEHRMKLASFSLINQNKMNFHFISNKIDAQKLNTKL 356

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +   + I   Q               + K+     L    +Q K++I             
Sbjct: 357 KYQYEQIHSMQN--------------VMKRTLSYKLSNYHQQLKHQI------------- 389

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                                +L S +   TL RGY  ++  +   I    ++     + 
Sbjct: 390 --------------------ALLSSLSPAETLLRGYAIVRSED-EIIKSVYDVKEHDYVN 428

Query: 487 INFFDGQANAIVI 499
           I   DG+  A V 
Sbjct: 429 IQLNDGRIKAEVK 441


>gi|167470082|ref|ZP_02334786.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis FV-1]
          Length = 434

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 135/481 (28%), Positives = 221/481 (45%), Gaps = 53/481 (11%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  + +  EIS +    +SGH YF+LKD+ +++   +++ +  +  F P+ G + LV   
Sbjct: 2   MGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNSNRRTTFRPQNGQQVLVRAS 60

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           IT +     YQ+I ES+ P+G G L    E+ K++L  EGLF   HK P+P   K + VI
Sbjct: 61  ITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLAAEGLFDQSHKQPLPHPAKQVGVI 120

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS +GA + D+L  +  R P L VII+P  VQG + P +I  AI   N   E       D
Sbjct: 121 TSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVDAPLQIVRAIQLANLRAE------CD 174

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+GHETD T+AD+ ADLRAPTP+ A
Sbjct: 175 VLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHETDVTIADFVADLRAPTPSAA 234

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           AE+    +  L   +   + R+   +   +  +      L   L      L  +R     
Sbjct: 235 AELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQQFTRLEHRLQQQHPHLRLARQ---- 290

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
                                                  +  +L+ Q+ +E+  +  +R 
Sbjct: 291 ---------------------------------------QTLLLKLQRRLEESAQTQIR- 310

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             L K+ +     + + Q + +I   +  +++   R+   +  ++        I    L+
Sbjct: 311 -LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEYRLRQAVERQLNGYRQRFGIACSQLE 369

Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
           + +   TL RGY+  Q      +   + +    ++     DG   + +      K+   K
Sbjct: 370 AVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKLTTRLQDGWVESEITQVTVAKKSRQK 429

Query: 511 K 511
           K
Sbjct: 430 K 430


>gi|254242467|ref|ZP_04935789.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           2192]
 gi|126195845|gb|EAZ59908.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           2192]
          Length = 459

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 226/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E     V V GE+S      +SGH YF+LKD++
Sbjct: 4   DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A  +
Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD     L    E  +  ++     +  R+ + 
Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDQDMRLRRAFERQLAVRHERLVRLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + +  +                                   
Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           + L  R               +    + L   +   TL RGY+ + D     I       
Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLKARLAEGELEVRVED 447


>gi|148546310|ref|YP_001266412.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida F1]
 gi|148510368|gb|ABQ77228.1| Exodeoxyribonuclease VII large subunit [Pseudomonas putida F1]
          Length = 463

 Score =  343 bits (879), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 144/500 (28%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 66  AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKDKLGAEGLFSTERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   ++L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAP+P+ AAE+  P    L+  L  L+ RL   +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPSPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L SL + L +  + L     RLD L   L     + + ++      +  R+ + 
Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N++   Q +    + + + +++              +L   R++ + ++       
Sbjct: 359 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 397

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 NGQRLTARLNEGELLVRVED 451


>gi|167032040|ref|YP_001667271.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida GB-1]
 gi|166858528|gb|ABY96935.1| exodeoxyribonuclease VII, large subunit [Pseudomonas putida GB-1]
          Length = 463

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 8   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 66  AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 126 ALKEKLGAEGLFSTERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   ++L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L+ RL   +   +
Sbjct: 239 TPIVSAVGHETDVSISDFVADMRAPTPSAAAELLAPDNSGLQQRLDGLQRRLLLRMQNRL 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L SL + L +  + L     RLD L   L     + + ++      +  R+ + 
Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDTRLAAQ 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N++  +Q +    + + + ++               +L   R++ + ++       
Sbjct: 359 HPGRNLKLLKQRLDSLAERLPRAMRD--------------VLKDRRQRFQAQL------- 397

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDDQGQAIRSAEQTR 431

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 432 NGQRLTARLNEGELLVRVED 451


>gi|320353185|ref|YP_004194524.1| exodeoxyribonuclease VII large subunit [Desulfobulbus propionicus
           DSM 2032]
 gi|320121687|gb|ADW17233.1| exodeoxyribonuclease VII, large subunit [Desulfobulbus propionicus
           DSM 2032]
          Length = 462

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 131/495 (26%), Positives = 227/495 (45%), Gaps = 57/495 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           D    +VSEL+  ++ ++E+    + V GEIS       SGH YF+LKD+ ++I A+++K
Sbjct: 3   DRRVLTVSELNESIRLLLEAQYPFISVGGEISNL-HKPYSGHCYFTLKDSGAQIRAVLFK 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                +   P++G   +  G+I+ +    +YQ+I++++   G+G L  A E+ K++L  E
Sbjct: 62  MQQRYLSRFPKDGDHVVCRGRISVYEPRGEYQLIVDTIDHQGAGALQLAFEQLKQRLATE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF +  K   P  P  I ++TSP GA + D +   + R P +R+ ++PV VQG++   E
Sbjct: 122 GLFDEHRKRRPPGFPGHITLVTSPRGAAVHDFIHIANRRCPMVRIAVYPVAVQGEQASAE 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +  A+ ++N           D+I+L RGGGSIEDLW FNDE + RAI  S++P++SA+GH
Sbjct: 182 MIRALEEINARVAT------DLIVLCRGGGSIEDLWAFNDEHLARAIRRSAVPVVSAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T+AD+AADLRAPTP+ AAE+  P    L+  +   + RL  ++    +     L  
Sbjct: 236 EIDFTIADFAADLRAPTPSAAAELLTPDSAALRVRINQQDERLRRLLRSRTEGAAQRLLV 295

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             + L +    L     RLD+L   LE +L   +  + +   H    +     +  +   
Sbjct: 296 ARRRLESMRHPLERLMLRLDQLTTRLERSLHTTLDARGQRLAHAARTLARLNPVRRVHLY 355

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            Q + E +  + + ++   +                                        
Sbjct: 356 EQRLNEARIRLLRAIRTQYQG--------------------------------------- 376

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNNNFITQKRNLATKTRILI 487
                        +    +L + +   TL+RGY  ++        +T    + T   + +
Sbjct: 377 --------KEERFARVAGVLHAVSPLATLERGYAIVRTTEKKQRVVTGYGQVRTGEVVEV 428

Query: 488 NFFDGQANAIVINKA 502
               G     V   +
Sbjct: 429 LLHRGALQCRVEQVS 443


>gi|325685898|gb|EGD27964.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 456

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 143/507 (28%), Positives = 250/507 (49%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                 +D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGMDEKYLTVSELNWYVKQKFDQDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ P+G G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D  AD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLVADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D + N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           LA   ++ ++  DGQA   +      K
Sbjct: 428 LAPGDQVRLHLKDGQAIGRIEEIKEGK 454


>gi|26987763|ref|NP_743188.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida KT2440]
 gi|31563091|sp|Q88P26|EX7L_PSEPK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|24982456|gb|AAN66652.1|AE016293_2 exodeoxyribonuclease VII, large subunit [Pseudomonas putida KT2440]
          Length = 459

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 62  AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   ++L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 182 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L+  L  L+ RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L SL + L +  + L     RLD L   L     + + ++      +  R+ + 
Sbjct: 295 THDRLRLESLTRRLRHPGERLRQRAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N++   Q +    + + + +++              +L   R++ + ++       
Sbjct: 355 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 393

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 394 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 NGQRLTARLNEGELLVRVED 447


>gi|169828972|ref|YP_001699130.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus sphaericus
           C3-41]
 gi|226697594|sp|B1HRX7|EX7L_LYSSC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|168993460|gb|ACA41000.1| Exodeoxyribonuclease 7 large subunit [Lysinibacillus sphaericus
           C3-41]
          Length = 452

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 143/502 (28%), Positives = 239/502 (47%), Gaps = 60/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V  L+ ++K   +   +L  V V+GE+S  + IH SGH YF+LKD+ +RI A 
Sbjct: 2   SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K+ F P+EG++  + G +  + G   YQ+ ++ + P G G+L  A  + K++L
Sbjct: 61  MFKAAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    K  IP  P+ I V+TS TGA IRDI   +  R+PL  ++I+P  VQG + 
Sbjct: 121 QKEGLFKLDWKQSIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I + N            ++I+ RGGGSIEDLW FN+E++ RAI  S IPIISA
Sbjct: 181 APNIVQNIQRANQ------DATCQVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADY +DLRAPTPT AAEMAVP +  L   +++ +++++ ++   +  +   
Sbjct: 235 VGHETDTTIADYVSDLRAPTPTAAAEMAVPDQMELFQRVLSQKSQIHQMVRSQLMAERQR 294

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN L +   L   ++       RL +L   L+  +++ + +K      + + +       
Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQLESGLQTAMQVDLMKKSAQLQQLHSTVAQHSPKK 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +  +++ +  + Q + +    +                                     
Sbjct: 355 ALAFHQRELEARMQQLTRAATYY------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +         T R L++    + L RG+T     + + I     +  +  
Sbjct: 378 ----------VAKQQQQFEATIRTLEALNPLSILTRGFTVAY-KDQHMIKSSTEVQEQDY 426

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F DG+  A V +  P  E
Sbjct: 427 LTLAFHDGKVVAEVKDILPKNE 448


>gi|325983269|ref|YP_004295671.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas sp. AL212]
 gi|325532788|gb|ADZ27509.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas sp. AL212]
          Length = 450

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 140/507 (27%), Positives = 233/507 (45%), Gaps = 58/507 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN FS  N + H   +VSEL+ + K ++E N+  + ++GEIS  +  + SGH YFSLKDN
Sbjct: 1   MNLFSPHNPI-HKILTVSELNNNTKQLLEHNIPLLWIKGEISNLK-RYQSGHWYFSLKDN 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  +++      I++ P +G++  V+  +T +     +Q+ +E++  +G G L  A 
Sbjct: 59  QAQVRCVLFSHKNQFIDWRPIDGMQVEVLALVTLYEPRGDFQLNVETMRRAGLGELFAAF 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  K KL + GLF+ + K P+P  P+ + +ITS   A ++D+L  +  R P L +II+P 
Sbjct: 119 ETLKSKLQQAGLFNPEKKKPLPIFPQQVGIITSLDTAALQDVLSTLQRRMPSLSIIIYPT 178

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG      IA  I       E       D++IL RGGGSIEDLW FN+E +  AI + 
Sbjct: 179 LVQGKTAANSIAEIIKTACQRTE------CDVLILCRGGGSIEDLWAFNEETVALAIESC 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           SIP+IS IGHETD+T+AD+ AD+RAPTPT AAE+A   +  L   L  L  R+    +  
Sbjct: 233 SIPLISGIGHETDFTIADFVADMRAPTPTAAAELASKNRIELSHRLNILHQRMYRTTLHR 292

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           I++ +  ++ L   L      +              + +L+  + + +            
Sbjct: 293 IEHAMQQVDLLSHRLIYPGDKIRQQ--------VIHQQHLQDRLIKTW------------ 332

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
               + ++K +  +L+  Q +     +  R                          L + 
Sbjct: 333 ---TYQLEKRQWKLLDFNQRLMAAHPRVTRLQEQH-------------------DELLSR 370

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           +    +R   IL   ++     +            +  L RGY+     +   I   + +
Sbjct: 371 LCYAYSRYSEILFSGLRHLQIQLFH-------LNPQAILDRGYSIAHSNDGTIIRSSKQI 423

Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506
            +  RI + F  G   A VI  +    
Sbjct: 424 HSGDRIKVKFAQGICKADVIMTSDSDP 450


>gi|148285036|ref|YP_001249126.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str.
           Boryong]
 gi|146740475|emb|CAM81010.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str.
           Boryong]
          Length = 456

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 164/490 (33%), Positives = 260/490 (53%), Gaps = 52/490 (10%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +  EY+V ELS H+K  +E     + VRGE+SG + I SSGH+YF+LKD+ + ++ + WK
Sbjct: 19  NAKEYTVHELSLHIKSAIEYQFGVLKVRGEVSGLK-IASSGHSYFNLKDDKAVLNCVCWK 77

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
            TLN ++   E+GIE +  G++TT+ G S+YQ+++E++  +G G+L+    +RK+KL++E
Sbjct: 78  TTLNLVKIKVEDGIEVIATGRLTTYSGQSRYQLVVENICIAGLGSLMQIFFQRKEKLMKE 137

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF +  K  +P  P II VITS +GAVIRDI  R++ RFP R++I+PV VQG+    E+
Sbjct: 138 GLFDNSRKKKLPAFPMIIGVITSISGAVIRDIAHRVNDRFPSRLLIWPVTVQGNNSANEV 197

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+AI + N +        P++II+ARGGGS+EDLW FN+E++VRAIA+S IPI+SAIGHE
Sbjct: 198 ASAIQECNNMLASNHDLAPEVIIIARGGGSVEDLWSFNEEIVVRAIASSVIPIVSAIGHE 257

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+TLAD+AADLRAPTP+ AAEM VPV   ++  L N   ++N++    +K  +  LN+ 
Sbjct: 258 VDFTLADFAADLRAPTPSAAAEMVVPVLADIKMRLNNSMNQINHVTFNYLKCSVMLLNNC 317

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              +      +  +  + D L                                       
Sbjct: 318 GNIVQKLKTMIDLNYQKFDELVF-------------------------------RFDAKI 346

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +  +E Q+ I Q                    + +       +      ++ L  ++  +
Sbjct: 347 EQFVELQKRILQ--------------------NNVLIDPSKLVQLYALKLENLNNKLYQL 386

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +     +    V +   +L +  Y   LKRG+  I+      ++    L +  +I I   
Sbjct: 387 VKRLFVNLDNKVYLLDSLLNNMDYSRVLKRGFAIIRLVEGPVVSSLSQLKSNDKIKIQLQ 446

Query: 491 DGQANAIVIN 500
           DG   A + +
Sbjct: 447 DGVRQATIDS 456


>gi|78223055|ref|YP_384802.1| exodeoxyribonuclease VII large subunit [Geobacter metallireducens
           GS-15]
 gi|123571798|sp|Q39UJ7|EX7L_GEOMG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|78194310|gb|ABB32077.1| Exodeoxyribonuclease VII large subunit [Geobacter metallireducens
           GS-15]
          Length = 453

 Score =  342 bits (877), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 160/502 (31%), Positives = 248/502 (49%), Gaps = 61/502 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M  F +K        +VS+L+  ++ ++E N  HV V GE+S    + +SGH YF+LKD 
Sbjct: 1   MELFPEKR-----ILTVSQLTSLIRGVLEENFEHVWVEGEVSNL-AMPASGHLYFTLKDA 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            ++I  ++++ +   ++F P +G+  +V G+IT +     YQ ++E L P G G L  A 
Sbjct: 55  GAQIRCVMFRASARALKFRPRDGMGLIVRGRITVYEQRGDYQFLVEYLEPRGVGALQLAF 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
            + K+KL +EGLF+++HK PIP +P+ I V+TS TGA I DIL  ++ RF  + V+I PV
Sbjct: 115 IQLKEKLAKEGLFAEEHKRPIPSLPQRIGVVTSATGAAIHDILNVLNRRFANVEVLIRPV 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+    EIA AI+  N           D++I+ RGGGS+EDLW FN+E + RA+  S
Sbjct: 175 KVQGEGAADEIAEAIIDFNR------YGAVDVMIVGRGGGSLEDLWAFNEEKVARAVHRS 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPIISA+GHE D+T+AD+ ADLRAPTP+ AAE+ V  KE L S +  L  RL   + R+
Sbjct: 229 RIPIISAVGHEIDFTIADFVADLRAPTPSAAAELVVKSKEELASKVEFLRHRLIQTLRRI 288

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +      L SL +AL +    L     RLD +   LE  +   +  + R    + N ++ 
Sbjct: 289 LADAGGELESLSRALRDPTVLLGHLSQRLDDIFVRLERAIAGDLKDRGRMLEALKNHLRL 348

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +++ R+ ++      E  + +H                         +      
Sbjct: 349 RNPALKVERARERVIALSDKSEIALLRH-------------------------VDRYREA 383

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478
                 R+                      ++ +   TL RGY+          +   R 
Sbjct: 384 AAVHSARL----------------------ETLSPLGTLARGYSVALKLPERVPVKTFRQ 421

Query: 479 LATKTRILINFFDGQANAIVIN 500
           LA K R+ + F  G+A   V +
Sbjct: 422 LALKDRLELLFHHGRAWCRVES 443


>gi|220934209|ref|YP_002513108.1| Exodeoxyribonuclease VII [Thioalkalivibrio sp. HL-EbGR7]
 gi|259646300|sp|B8GP32|EX7L_THISH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|219995519|gb|ACL72121.1| Exodeoxyribonuclease VII [Thioalkalivibrio sp. HL-EbGR7]
          Length = 447

 Score =  342 bits (877), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 133/492 (27%), Positives = 231/492 (46%), Gaps = 57/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            D   ++V+ L+  ++ ++E     + V GE+S      +SGH YF+LKD+ +++   ++
Sbjct: 4   TDRDIFTVTRLNQAVQGLLEGTFPLIWVEGELSSV-SRPASGHLYFTLKDSGAQVRCALF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +     + F P +G++ LV  ++  +     YQ+I+E +  +G G L  A E+ K++L  
Sbjct: 63  RNRAQLMRFRPADGMQVLVRARVGLYAPRGDYQLIVEHMEEAGDGALRRAFEELKQRLER 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF  + K P+P  P+ + VITSPTGA IRDIL  +  RFP L  +I+PV VQG     
Sbjct: 123 EGLFDAERKRPLPRFPRRLGVITSPTGAAIRDILSVLRRRFPGLPALIYPVPVQGAAAAP 182

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA A+   +  K+       D++ILARGGGS+EDLW FN+E++ RAI +  IP++S +G
Sbjct: 183 AIAEALRTASARKD------CDVLILARGGGSLEDLWAFNEEIVARAIHDCEIPVVSGVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD AADLRA TP+ AAE+  P+++     +      L   + R ++++   L+
Sbjct: 237 HEVDVTIADLAADLRAATPSAAAELVSPLRDEWLLHVERQRRLLVERMQRGLQHQALKLD 296

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +L + L   + ++ L     R+D L R L   ++  +  +      + +R++       +
Sbjct: 297 NLERRLRQQHPERRLQNQAQRVDELERRLALAMQHRLRHRESRLARLQDRLQHRSPARAL 356

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++      + +  +                                              
Sbjct: 357 ERLEAREAQLRLRL---------------------------------------------- 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            +  L  ++      ++   R L S +   TL RGY+ +       I     +    R+ 
Sbjct: 371 -DSALRRRLDRFEARLAAAGRALHSVSPLATLGRGYSILTTAEGQVIRDASQVQVNDRVE 429

Query: 487 INFFDGQANAIV 498
                G+ +  V
Sbjct: 430 ARLGKGRLSCTV 441


>gi|94967310|ref|YP_589358.1| exodeoxyribonuclease VII large subunit [Candidatus Koribacter
           versatilis Ellin345]
 gi|124007142|sp|Q1IV16|EX7L_ACIBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|94549360|gb|ABF39284.1| Exodeoxyribonuclease VII large subunit [Candidatus Koribacter
           versatilis Ellin345]
          Length = 455

 Score =  342 bits (877), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 142/487 (29%), Positives = 227/487 (46%), Gaps = 53/487 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V ++   ++  +E   + V V GEIS +R    SGH YFSLKD  +++  ++++   
Sbjct: 18  IWQVRDIVSAVRAALEREYADVWVEGEISNFR-PADSGHLYFSLKDESTQLRIVMFRSQA 76

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F PE G++ +  GK+T + G  + Q++ E L P G+G L  A E+ K KL  EGLF
Sbjct: 77  RLLKFRPENGLKVIARGKVTLYEGRGELQLMAEYLEPQGAGALQIAFEQLKAKLQAEGLF 136

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K PIP +PK I V+TSP GAVI+DIL  +  R   + V+IFP +VQG+    E+A+
Sbjct: 137 ARERKKPIPALPKKIGVVTSPRGAVIQDILNVLRRRHNSVHVLIFPAQVQGETAASEVAS 196

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +   N           ++II+ARGGGSIEDL  FNDE + R+IA S+IP+ISA+GHETD
Sbjct: 197 GVRYFNKAA------NVEVIIVARGGGSIEDLAAFNDEGLARSIATSTIPVISAVGHETD 250

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ ADLRAPTP+ AAE+ +  K                                  
Sbjct: 251 FTICDFVADLRAPTPSAAAELVIRSK---------------------------------- 276

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                         RL  L   L   L + +    +  + +        +   I + +Q 
Sbjct: 277 ---------QEVDERLTALSTHLARALRVRLLEYEKKLDRLARHGAFGGMQTAIARRQQR 327

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + +    +        R   L ++  +A   +     ++R    H  +   + ++   L 
Sbjct: 328 VDDLAFRLSVAQTNVFRQ--LHRRLDVASTRVRHHDLRSRFAAEHRELSARVEKLAATLR 385

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +    T +      LQ  +  + L+RGY  + D     +   R +     I      G
Sbjct: 386 ANLMRRRTRIERLAGQLQGLSPISILERGYALVFDAEGRLLKDARQVREGNTIRAQLALG 445

Query: 493 QANAIVI 499
           Q +A+V 
Sbjct: 446 QISAVVK 452


>gi|78043300|ref|YP_360809.1| exodeoxyribonuclease VII large subunit [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|123743154|sp|Q3AAM5|EX7L_CARHZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|77995415|gb|ABB14314.1| exodeoxyribonuclease VII, large subunit [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 472

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 132/491 (26%), Positives = 229/491 (46%), Gaps = 39/491 (7%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VSEL+ ++    E +  L+ V V GE+S  +   S GH YF+LKD  + +  +++KG  
Sbjct: 7   TVSELTDYIAEKFEKDDWLNQVAVEGELSNCKF--SQGHLYFTLKDERAELKGVMYKGRA 64

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + + F+P++G + +V G++  +     YQI  E + P G G L    E+ K+KL ++G F
Sbjct: 65  SALPFIPQDGQKVIVFGQVAVYKKRGIYQIYAEMIEPLGIGALYLKFEQTKEKLRDKGYF 124

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +++ K  +P  P+ I ++TS  GA IRDIL  I  R+P   + + PV VQGDE P +I  
Sbjct: 125 AEERKKKLPRYPEKIGIVTSKNGAAIRDILTTIKKRWPKATLYLVPVAVQGDEAPGQIVK 184

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  LN           ++IILARGGGS E+L  FN+E +  AI  S+IP+++ IGHETD
Sbjct: 185 ALNLLNR------YKLCEVIILARGGGSFEELAAFNEETVADAIYASNIPVVTGIGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL-L 311
            ++AD  AD RAPTPTGAA  A P    + ++L     ++   +    + +   L     
Sbjct: 239 TSIADMVADRRAPTPTGAAVEATPNLVEIWNNLREQRQKMVKALANYFQREQKNLEFQER 298

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           + L   ++ ++     +      L  + +    ++    + +  ++         ++ ++
Sbjct: 299 RILRAYEKLITDKSREVTEGLERLLRSFKTTFQQEKNRLSLLKEKLILLSPYLRHKQQKE 358

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E ++ +                           +    +      + +   R+   +
Sbjct: 359 KLEELKERL-------------------------FLRCAELLKRNQAVLIQQSLRLRTSV 393

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            + +   +  +S     L+       L RGY  + D     +T   NL    R  I F D
Sbjct: 394 KNLVLQKNLVLSSYEERLKLLNPLKILNRGYAVVFDFEGRVVTSVNNLP--ERFKIKFSD 451

Query: 492 GQANAIVINKA 502
           G+A A  + K 
Sbjct: 452 GEALAKALGKN 462


>gi|317484632|ref|ZP_07943535.1| exonuclease VII [Bilophila wadsworthia 3_1_6]
 gi|316924106|gb|EFV45289.1| exonuclease VII [Bilophila wadsworthia 3_1_6]
          Length = 490

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 141/516 (27%), Positives = 228/516 (44%), Gaps = 54/516 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V +L+  +K  VES   +V VRGE++      SSGH YFSLKD ++ + A+ +KG+ 
Sbjct: 3   ILTVRQLTAQIKDAVESGFPYVWVRGEVTNV-SRPSSGHIYFSLKDENALLQAVWFKGSQ 61

Query: 74  N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
                                +      G + +  G++T +     YQ+++E    SG G
Sbjct: 62  KERETFDPLTGEVFEDGPRTSLAGTLRNGQQIICAGRLTVYAPRGGYQLVVELAQDSGEG 121

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLR 173
            L  ALE  K+KL E+G FS + K PIP  P  +AVIT+P+GA IRD L+    R     
Sbjct: 122 QLHLALEALKRKLAEKGYFSLERKRPIPEHPHRVAVITAPSGAAIRDFLRLSGERGTGCE 181

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           + I PV VQGD+ P  IA A+   N           D+++L RGGGS++DLW FNDE + 
Sbjct: 182 IRIHPVPVQGDDAPPRIAEALDDENRRGWA------DVLVLIRGGGSLQDLWAFNDERVA 235

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
            A+  S IP+++ IGHE D ++AD  ADLRA TP+ AA +  P ++     + +LEA L 
Sbjct: 236 DAVYRSRIPVVAGIGHEVDTSIADMVADLRAATPSHAALLLWPERQWYAQLVDDLEANLL 295

Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
               R +      L++L +AL   + ++ L+    R   L R L+  LE  + R      
Sbjct: 296 EAAERRLSQADQRLDTLGRALAWLSPERGLARLEERFGTLARRLDFALEQKLERTDARLR 355

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            +   +        +    +      + + Q                             
Sbjct: 356 FLEAGMSRYAESRVLDTRLEQTAALTRRLRQAQAL------------------------- 390

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
           R+  +   +    +R+E   + + +     +      L+    +  L+RGY      + +
Sbjct: 391 RLEQIGGRLDTASSRLEERFARQFEGLERQLERHDLRLRGLDPEGPLERGYAYAFTADGH 450

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           F+   R++     + +   DG+A+  V       E 
Sbjct: 451 FVRSIRDVQPGASLTVKIRDGEADTRVTAVRATGES 486


>gi|317128427|ref|YP_004094709.1| exodeoxyribonuclease VII large subunit [Bacillus cellulosilyticus
           DSM 2522]
 gi|315473375|gb|ADU29978.1| exodeoxyribonuclease VII, large subunit [Bacillus cellulosilyticus
           DSM 2522]
          Length = 460

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 162/498 (32%), Positives = 249/498 (50%), Gaps = 59/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +D    SVS+++  +K +VE++  L +V +R EIS ++  HS GH YF+LKD+ SRI+++
Sbjct: 1   MDQEFLSVSDVTRRIKRLVETDAVLQNVWLRAEISNFK-WHSRGHMYFTLKDDKSRINSV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    ++F PE G+  LV G I+ +    +YQ+ ++ + P G G L  A E+ KKKL
Sbjct: 60  MFAGNNRYLKFTPENGMNVLVRGDISVYEPHGQYQLYVKEMQPDGIGNLYLAYEELKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
              G FS + K  IP  PK IAV TSPTGA +RDIL  +  RFPL +VI+ PV VQG E 
Sbjct: 120 EMAGYFSRERKKAIPTFPKTIAVATSPTGAAVRDILTTVHRRFPLTKVILLPVLVQGPEA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              IA AI Q N           D++I+ RGGGS+E+LW FN++++  AI  S IPIISA
Sbjct: 180 APSIARAIKQAN------FAGIFDVMIIGRGGGSLEELWAFNEQIVAEAIYESKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T++D+ ADLRAPTPT AAE+AVP    L   + +  +RL   + RL   +   
Sbjct: 234 VGHETDVTISDFVADLRAPTPTAAAELAVPHIHELLKRVQDQRSRLIQTMDRLKSVQRER 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       + +      LDRL   +   + + + ++      +  RI+     H
Sbjct: 294 LGHLSKSYAFKYPKRLIEQKEQDLDRLVELMTKTMMLNVDKQKDKLQGLKGRIQRMHPTH 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + + R+ I +   ++ +                                          
Sbjct: 354 KLLQERKRISDAIVNLRR------------------------------------------ 371

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 ++  I S  +  S++   L+  +    +KRGY    +  NN I +  ++     
Sbjct: 372 -----AMNETINSKQSRFSLSLSKLELLSPLQMMKRGYNLAYNEENNLIKKLEDVKENEP 426

Query: 485 ILINFFDGQANAIVINKA 502
           I I   DG+ +  V  K+
Sbjct: 427 ISIRLQDGKLSCHVTEKS 444


>gi|116051802|ref|YP_789356.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|122260948|sp|Q02RT0|EX7L_PSEAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|115587023|gb|ABJ13038.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 459

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E     V V GE+S      +SGH YF+LKD++
Sbjct: 4   DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GKI+ F G   YQ+I +++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K P+P  P+ I +++SP+GAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A  +
Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L  L  RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L  + + L +  + L     RLD L   L    E  +  ++     +  R+ + 
Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERHLAVRHERLVRLETRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +      + +  ++ L+                               
Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAREVLKDRRQH-------------------------- 388

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +    + L   +   TL RGY+ + D     I       
Sbjct: 389 ---------------------LEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 PGQRLKARLAEGELEVRVED 447


>gi|314933697|ref|ZP_07841062.1| exodeoxyribonuclease VII, large subunit [Staphylococcus caprae C87]
 gi|313653847|gb|EFS17604.1| exodeoxyribonuclease VII, large subunit [Staphylococcus caprae C87]
          Length = 445

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVTTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLLEARVSVYVRRGNYQIYVNKMQLDGIGNLYQKLEELKKKLTKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K PIP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDSSVKKPIPKFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQIHISTLVQGTQAKQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   +TL         D II+ RGGGSIEDLW+FN+E +V+AI + + PIISA+GHET
Sbjct: 184 EKIEHADTL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIYSCNTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   +  L   I + ++ +   L+ L 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYVEQQKKQLSHLN 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L ++L+  +   + +  ++   +        L +NI ++
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQLMSTYLEKHTQNLKLLKQHFNLKTLNNNISQD 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           + H+ + ++ + Q +                                       +++++ 
Sbjct: 357 KMHVSQYRERMTQAITNE------------------------------------LSKLQT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L +KI++           L + +  NT+ RGY  + + ++  +T   ++     I +  
Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDITENDTITLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGNVDATVKKV 440


>gi|169350500|ref|ZP_02867438.1| hypothetical protein CLOSPI_01268 [Clostridium spiroforme DSM 1552]
 gi|169292820|gb|EDS74953.1| hypothetical protein CLOSPI_01268 [Clostridium spiroforme DSM 1552]
          Length = 438

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +VS L+ +LK  ++S+  L  + ++GE+S ++  HSSGH YF+LKD  SRI+A+
Sbjct: 1   MEKRYLTVSALNRYLKAKIDSDEQLQKILIKGEVSNFKH-HSSGHLYFTLKDETSRINAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     K+ F  E G++ L+   ++ +  +  YQ+ ++++   G G L    E+ KK L
Sbjct: 60  MFASKARKLPFELENGMKVLIQASVSVYDVAGTYQLYVDNIEQDGLGNLYLRYEQLKKTL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  +HK  IP  P  IAV+++   A + DI++ I  RFP +RVI+FP+ VQG   
Sbjct: 120 ALEGLFDQEHKQEIPKFPSKIAVLSAYPSAALADIVRTIKLRFPVVRVIVFPIPVQGKGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   +  +++L         + II+ARGGGS+EDLW+FN+E + RAI N   PIIS 
Sbjct: 180 YLHIIKTLNYVDSL-------GFNTIIIARGGGSLEDLWNFNEEALARAIYNCKTPIISG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ AD R  TPT A   A P    L+ ++ N+   LN ++ + I      
Sbjct: 233 VGHEIDYTICDFVADYRCATPTAAGIKATPDLVELKQNVNNINYTLNTLMKQKITLNKQM 292

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN L       N ++     + ++D L   L+      +                     
Sbjct: 293 LNKLNSFYLFKNPNKLFEDKKVKIDYLSERLKDIFTYNLN-------------------- 332

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
                        +++ Q          LE+K  + +++   EQ                
Sbjct: 333 -------FQSNNAKNLIQTFNHQANLFTLEQKNHLNLINQTMEQ---------------- 369

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                ++  KIK     +  T   L + +    L+RG+  +   +N  +T    L T  +
Sbjct: 370 -----LMKQKIKYEKEKLYYTLSKLNTLSPLKVLERGFAIVLKEDNVVLT-ANELKTGDK 423

Query: 485 ILINFFDGQANAIV 498
           I I   DG  NAI+
Sbjct: 424 IKIKMKDGSKNAII 437


>gi|189184650|ref|YP_001938435.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str.
           Ikeda]
 gi|189181421|dbj|BAG41201.1| exodeoxyribonuclease large subunit [Orientia tsutsugamushi str.
           Ikeda]
          Length = 456

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 160/490 (32%), Positives = 259/490 (52%), Gaps = 52/490 (10%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +  EY+V ELS H+K  +E     + VRGE+SG + I SS H+YF+LKD+ + ++ + WK
Sbjct: 19  NAKEYTVHELSLHIKSAIEYQFGVLKVRGEVSGLK-IASSCHSYFNLKDDKAVLNCVCWK 77

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
            TLN ++   E+GIE +  G++TT+ G S+YQ+++E++  +G G+L+    +RK+KL++E
Sbjct: 78  TTLNLVKIKVEDGIEVIATGRLTTYSGQSRYQLVVENICIAGLGSLMQIFFQRKEKLMKE 137

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF +  K  +P  P +I VITS +GAVIRDI  R++ RFP +++++PV VQG+    E+
Sbjct: 138 GLFDNSRKKKLPAFPMVIGVITSISGAVIRDIAHRVNDRFPSKLLVWPVTVQGNNSANEV 197

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+AI + N +        P++II+ARGGGS+EDLW FN+E++VRAIA+S IPI+SAIGHE
Sbjct: 198 ASAIQECNNMLTSNNDLAPEVIIIARGGGSVEDLWSFNEEIVVRAIASSVIPIVSAIGHE 257

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+TLAD+AADLRAPTP+ AAEM VPV   ++  L N   ++N++    +K  + +LN+ 
Sbjct: 258 VDFTLADFAADLRAPTPSAAAEMVVPVLADIKMRLNNSMNQINHVTFNYLKCSVMSLNNC 317

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              +      +  +  + D L                                       
Sbjct: 318 GNIVQKLKTMIDLNYQKFDELVF-------------------------------RFDTKV 346

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E Q+ I Q                    + +       +      ++ L  ++  +
Sbjct: 347 EQFGELQKRILQ--------------------NNVLIDPSKLVQLYALKLENLNNKLYQL 386

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +     +    V +   +L +  Y   LKRG+  I+  +   ++    L    +I I   
Sbjct: 387 VKRLFVNLDNKVYLLDSLLNNMDYSRVLKRGFAIIRLVDGPVVSSLSQLKGNDKIKIQLQ 446

Query: 491 DGQANAIVIN 500
           DG   A + +
Sbjct: 447 DGVRQATIDS 456


>gi|58582360|ref|YP_201376.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58426954|gb|AAW75991.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 504

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 127/492 (25%), Positives = 220/492 (44%), Gaps = 60/492 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 64  NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 122

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A +  + +L  E
Sbjct: 123 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 182

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 183 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 242

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 243 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 296

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 297 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 356

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +            +  R  +    +  R++         
Sbjct: 357 LALRLRAHSPQARLQLLHRRQEE-------AGRQLGARMTQVLERLQARVQRGHAQVQSH 409

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++H+   QQ +  +  Q                                         
Sbjct: 410 NPQRHLAGLQQRLRALHPQ----------------------------------------- 428

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
              +  +++     +    R L++     T+ RGY  +    + + +     +A   R+ 
Sbjct: 429 -AAMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLR 487

Query: 487 INFFDGQANAIV 498
               DG     V
Sbjct: 488 AQLADGSIEVRV 499


>gi|295425231|ref|ZP_06817934.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylolyticus
           DSM 11664]
 gi|295065007|gb|EFG55912.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylolyticus
           DSM 11664]
          Length = 452

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 138/502 (27%), Positives = 239/502 (47%), Gaps = 58/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            D+   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   ADNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V G ++ +     YQ   ES+ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAESMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD  
Sbjct: 121 AKEGLFNPEHKKQLPHFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVVAMQQILQHADD-----YDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305
           +GHETD TL D  AD+RA TPT AAE A P      +++  L+ RL   +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADVRAATPTAAAEYATPNLTDEIANIHQLQGRLLASVQAIIREKRDI 295

Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
               +    +    +        +D L + L +++   + R                   
Sbjct: 296 LQRINNSVIMREPTRLYDQQIQTVDMLKQRLANSMNNKLER------------------- 336

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
                RQ      Q ++                              +I  +      L 
Sbjct: 337 ----ARQQFNLAAQRLQS------------------------NSPDKQIIQMQQQRIFLA 368

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   +  ++     +   T + L  ++   TL+RG+T   + +   ++    +     
Sbjct: 369 KRLIDNMKKQLLLKRDAFKQTVQQLNDYSPLKTLERGFTYTTNESGQTVSSVDQIRNNDH 428

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + ++F DG A AIV      K+
Sbjct: 429 LKLHFKDGIAEAIVTAIRGDKD 450


>gi|302039002|ref|YP_003799324.1| exodeoxyribonuclease VII large subunit [Candidatus Nitrospira
           defluvii]
 gi|300607066|emb|CBK43399.1| Exodeoxyribonuclease VII, large subunit [Candidatus Nitrospira
           defluvii]
          Length = 452

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 232/494 (46%), Gaps = 56/494 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS+++  ++  +E+    + + GEI+  R   SSGH YF+LKD  S++  ++++    +
Sbjct: 13  SVSDVTRLIRDSLEAQFRDIWIEGEITNLRA-PSSGHLYFTLKDEQSQLRGVLFRSGALR 71

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F  +EG+  +  G+I+ +    +YQ+I++SL P G G    A E+ K++L  EGLF D
Sbjct: 72  LRFALQEGLTIVARGRISVYEPRGEYQLIVDSLEPKGVGAFQLAFEQLKERLAREGLFDD 131

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
             K P+P  P+ + V+TS TGA +RDI+  +  R P+  ++I PV VQG+   + IA+AI
Sbjct: 132 ARKRPLPPFPRTVGVVTSRTGAAVRDIVAVLRRRCPVANILIAPVPVQGEGAAERIADAI 191

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
             L+        P+ +++I+ RGGG+ EDLW FN+E++VRAI  S +P++SA+GHE D T
Sbjct: 192 TTLS------GMPQVEVMIVGRGGGASEDLWAFNEEVVVRAIVQSKVPVVSAVGHEIDVT 245

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           LAD+AAD RAPTP+ AAE  VPV + +   L     RL+ I+  L++ + +     +  +
Sbjct: 246 LADFAADYRAPTPSAAAEAVVPVLDEIVERLGETSNRLDRIVRTLLEMQRHRFERSVGVM 305

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                 +     RLD L   L   L   +   +R      + + +      IQ     I 
Sbjct: 306 REMRFRVQAHAQRLDELRDGLTRTLTERLTLLHRGMVERQHALLAQGPHRRIQTALVVIP 365

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           +  + +EQ                                                    
Sbjct: 366 QLYKRLEQET-----------------------------------------------RRG 378

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQ 493
           + S   +V+     L + +    L RGY+ IQ   +   +     +A    +     +G+
Sbjct: 379 LMSRRQAVASYMMALDALSPLAILSRGYSVIQAIPSGRIVRLASEVAVGDVVQARLAEGR 438

Query: 494 ANAIVINKAPPKEQ 507
               V    PP   
Sbjct: 439 LLCRVNEVLPPSMP 452


>gi|300811682|ref|ZP_07092158.1| exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300497383|gb|EFK32429.1| exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 456

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/507 (28%), Positives = 250/507 (49%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ P+G G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D AAD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSILTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D + N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           LA   ++ ++  DGQA   +      K
Sbjct: 428 LAPGDQVRLHLKDGQAIGRIEEIKEEK 454


>gi|88813482|ref|ZP_01128717.1| Exodeoxyribonuclease VII [Nitrococcus mobilis Nb-231]
 gi|88789272|gb|EAR20404.1| Exodeoxyribonuclease VII [Nitrococcus mobilis Nb-231]
          Length = 477

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 138/501 (27%), Positives = 232/501 (46%), Gaps = 58/501 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P    +      Y+VS L+  ++ ++E  L  + V GEIS       SGH YF+LKD  
Sbjct: 10  EPHPLSHETRRDVYTVSRLNQEVRLLLEHALPLLWVEGEISNL-SQPRSGHLYFTLKDEA 68

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++     + F P++ +  L   +I+ +     +Q+IIE +  +G G L  A E
Sbjct: 69  AQVRCAMFRNRSLYLRFRPKDSLHVLARARISLYAPRGDFQLIIEHMEEAGDGALRRAFE 128

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K +L +EGLF+ +HK P+P +P+ I V+TSP+GA +RD+L  +  RFP +RV+I+PV 
Sbjct: 129 ALKNRLAQEGLFAAEHKKPLPALPRRIGVVTSPSGAALRDVLSVLRRRFPAIRVLIYPVA 188

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG   P EI   I      +E       D ++L RGGGS+EDLW FN+E + RAI    
Sbjct: 189 VQGANAPGEITATIRLAARRRE------VDALLLTRGGGSLEDLWAFNEEAVARAIHECP 242

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +PI+SA+GHETD T+AD+ AD RAPTP+ AAE+  P      + + +L  RL   + R +
Sbjct: 243 LPIVSAVGHETDTTIADFVADQRAPTPSAAAELLSPDGPGWLTRIDHLAERLRQGLRRGL 302

Query: 301 KYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + + + L  L + L   +  + L     RLD L + +                H+ +R+ 
Sbjct: 303 ERQRHGLGRLERRLANQHPGRRLQERAQRLDELEQRMTRAERGRRRELTTRHGHLADRLH 362

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  +++  + I   ++ +                                      
Sbjct: 363 RQDPRCRVRERLEQIAALRRRLHA------------------------------------ 386

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKR 477
                       L   + S    ++ T R L++ +   TL RGY  ++   +++ + +  
Sbjct: 387 -----------ALGQDLGSRRQLLAATVRALEAVSPLKTLGRGYAIVRRQRDDHIVRRPS 435

Query: 478 NLATKTRILINFFDGQANAIV 498
            +    R+    + G+    V
Sbjct: 436 EVTPGERVSARLYSGELVCRV 456


>gi|319787573|ref|YP_004147048.1| exodeoxyribonuclease VII large subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466085|gb|ADV27817.1| exodeoxyribonuclease VII, large subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 451

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/509 (27%), Positives = 231/509 (45%), Gaps = 61/509 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
             ++NS      + ++L+   + ++ES    V V GE+       +SGH YF+LKD  ++
Sbjct: 1   MPEQNS----ILTPAQLNTLARDLLESAFPLVWVEGELGNVT-RPASGHLYFNLKDARAQ 55

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   ++K     ++F P EG++ L  G++T +     YQ++++ +  +G G L  A E  
Sbjct: 56  VRCAMFKPKSQWLKFAPREGLKVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAYEAL 115

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L  EGLF    K P+P   + +AVITSPTGA +RD+L  +S R P L V I P  VQ
Sbjct: 116 KARLEAEGLFDPARKRPLPAWVRRVAVITSPTGAAVRDVLSVLSRRCPLLDVEILPSLVQ 175

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           GD    +I       + L+      R D I+LARGGGS+EDLW FNDE + RAIA+S +P
Sbjct: 176 GDTAAPQI------TSLLQRAGASGRYDAILLARGGGSLEDLWAFNDERLARAIADSPVP 229

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SA+GHETD+TLAD+AAD+RAPTP+ AAE+ VP +  L + + +L  RL+      ++ 
Sbjct: 230 VVSAVGHETDFTLADFAADVRAPTPSVAAELLVPDRRDLLARIGSLHGRLHGTQGHRLRQ 289

Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +   +     L   +    L     R + L R LE      + + +    H    +++ 
Sbjct: 290 AMQRADRAALRLQAQSPRNRLRLLGQRQEALRRRLETRWREQLQQHHARVRHAGAVLRAH 349

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + R+ +   +   +  + + L+   L                           
Sbjct: 350 HPQRQLARLRERLQRLRARPQAAIARVLQRDAL--------------------------- 382

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                +    R L++ +   T+ RGY+ +       +     +A
Sbjct: 383 --------------------KLRALARSLEACSPLATVARGYSIVTTAEGALVHSTAQVA 422

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509
              R+     DG     V +  P      
Sbjct: 423 AGDRVQARLRDGSVVLSVQSVRPDPPPQP 451


>gi|71281697|ref|YP_270894.1| exodeoxyribonuclease VII large subunit [Colwellia psychrerythraea
           34H]
 gi|71147437|gb|AAZ27910.1| exodeoxyribonuclease VII, large subunit [Colwellia psychrerythraea
           34H]
          Length = 444

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 143/493 (29%), Positives = 230/493 (46%), Gaps = 61/493 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
              +SEL+  ++ I+ES L+ V + GE+S +    SSGH Y SLKD  S++   ++KG+ 
Sbjct: 6   ILQISELTKKVRFILESELNTVWLTGEVSNFIA-ASSGHWYLSLKDAKSQVKCAMFKGSN 64

Query: 74  NKIEFL----PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            ++       P  G + LV  K++ +     +Q+IIE +  +G+G L    E+ K KL  
Sbjct: 65  RRVRLSTGAAPSNGQQVLVRAKVSLYEPRGDFQLIIEHMEDAGTGLLRQQYEQLKNKLNN 124

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G+F    K  +P     + ++TSPTGA ++DIL  +  R P ++ II+P  VQG+    
Sbjct: 125 QGIFDLSRKQQLPKNISCVGIVTSPTGAAVKDILTVLKRRNPNIKAIIYPSLVQGEYAQG 184

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I +AI   N+  E       D++I+ RGGGS+EDLW FN+E +V AI  S++PIISA+G
Sbjct: 185 DICHAIESANSRNE------CDVLIVGRGGGSLEDLWPFNEESVVHAIYKSALPIISAVG 238

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D TL+DY ADLRAPTP+ AAE+       L + L+  + RL       + Y  N  +
Sbjct: 239 HEIDTTLSDYVADLRAPTPSAAAELVSSDSSELLNQLLMFKQRLIKAQQNKLVYLGNEQS 298

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L   L   + +Q L   + + D L   L+  ++  I +       +  R+     +  I
Sbjct: 299 YLQHRLSQVHPEQQLQLQQQKADELSLRLKQAMKRNIEQVQSKPIQLSQRLLQQSPLKTI 358

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q  +Q I +    I Q ++                                         
Sbjct: 359 QLQQQKIDQNAHRITQAMQ----------------------------------------- 377

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                 + ++            LQ  +   T+ RGY+  +++ N  I++   +     I 
Sbjct: 378 ------NSLQHNSEKFVHLIEQLQLVSPLATIARGYSVTRNSKNEVISKTAQVKIDEEIS 431

Query: 487 INFFDGQANAIVI 499
           +   DG  NA VI
Sbjct: 432 VQLSDGHINARVI 444


>gi|167756947|ref|ZP_02429074.1| hypothetical protein CLORAM_02496 [Clostridium ramosum DSM 1402]
 gi|237734650|ref|ZP_04565131.1| exodeoxyribonuclease large subunit [Mollicutes bacterium D7]
 gi|167703122|gb|EDS17701.1| hypothetical protein CLORAM_02496 [Clostridium ramosum DSM 1402]
 gi|229382470|gb|EEO32561.1| exodeoxyribonuclease large subunit [Coprobacillus sp. D7]
          Length = 438

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 128/492 (26%), Positives = 225/492 (45%), Gaps = 58/492 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +VS L+ +LK  ++S+  L  + ++GE+S ++  HSSGH YF+LKD HSRI+A+
Sbjct: 1   MEKRYLTVSALNRYLKAKIDSDSQLQRILIKGEVSNFKH-HSSGHFYFTLKDEHSRINAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++    +K+ F    G++ LV   ++ +  +  YQ+ ++++   G G L    E+ KK+L
Sbjct: 60  MFSSKASKVPFDLTNGMKVLVQASVSVYDVAGTYQLYVDTIEQDGLGNLFLKYEQLKKQL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+ ++K  IP  P  IAV+++   A + DI++ I  RFP +RVI+FP+ VQG + 
Sbjct: 120 ASEGLFNPENKLVIPKFPSKIAVLSAYPSAALADIIRTIHLRFPVVRVIVFPIPVQGKDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   +  ++TL           II+ARGGGS+EDLW+FN+E + RAI     PIIS 
Sbjct: 180 YLEIIRTLRYVDTL-------GFSEIIIARGGGSLEDLWNFNEEGLARAIYQCKTPIISG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ AD RA TPT AA  A P                              
Sbjct: 233 VGHEVDFTICDFVADYRAATPTAAAIKATPD----------------------------- 263

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                         L   +  +D +   L + ++  I     + N + +           
Sbjct: 264 --------------LFELQQAVDNIKYTLNNLMKQKIILNKENLNRLKSFYLFKNPQKMF 309

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +     I      +  +       +  ++ +   ++     Q           +  +   
Sbjct: 310 EDKTAKIDYLYDQLNNVF---NHDLIEKQNKASNLIQTFNHQANLFTLNQRNRLDTINRT 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  K++        +   L + +   TL+RGY  +   + + I+   +L +  +I 
Sbjct: 367 MSLEIKRKLQHNQEKFYYSLSKLNTLSPLKTLERGYAIVLKED-HVISSVDDLNSGDKIE 425

Query: 487 INFFDGQANAIV 498
           +   +G   AI+
Sbjct: 426 LKLHNGIKKAII 437


>gi|104783367|ref|YP_609865.1| exodeoxyribonuclease VII large subunit [Pseudomonas entomophila
           L48]
 gi|123079094|sp|Q1I5K4|EX7L_PSEE4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|95112354|emb|CAK17081.1| exonuclease VII, large subunit [Pseudomonas entomophila L48]
          Length = 459

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 142/500 (28%), Positives = 234/500 (46%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 4   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I   +++    ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 62  AQIRCALFRQNALRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLGAEGLFSTERKRPLPAHPQRIGIITSPTGAVIRDIISVFRRRAPQVELNLIPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 182 VQGREAINQIVRALQMADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    LQ  L +L+ RL   +   +
Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLDSLQRRLLLRMQSRL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    +  L + L +  + L     RLD L   L     + + +++     +  R+ + 
Sbjct: 295 AHDRLRVEGLARRLRHPGERLRQQAQRLDDLDMRLRRAFALNMNQRHERLGRLDTRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               +++  +Q +    + + + ++                                   
Sbjct: 355 HPGRSLKLLKQRLDSLAERLPKAMR----------------------------------- 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  R +                  + LQ  +   TL RGY+ + D +   I       
Sbjct: 380 DVLKDRRQR------------FQAQLQTLQVVSPLATLARGYSILLDEHGQAIRSAAQTH 427

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+     +G+    V +
Sbjct: 428 NGQRLTARLNEGELKVRVED 447


>gi|329910418|ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546186|gb|EGF31232.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 454

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 131/507 (25%), Positives = 221/507 (43%), Gaps = 57/507 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +   ++     P  +VS L+  +  ++E N   + V GE+S +    +SGH YFSLKD  
Sbjct: 4   DHLFEQPDTASPVLTVSALNQAVSRMLERNFPLMWVAGEVSNFT-RAASGHWYFSLKDAS 62

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++ A++++G      F+P+EG +  V   +T +     +Q+ +E++  +G G L  A  
Sbjct: 63  AQVRAVMFRGRAQYAGFIPKEGDKVEVRTLVTLYAARGDFQLSVEAIRRAGVGNLFEAFL 122

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K+KL  EGLF    K  +P  P+ I ++TS   A +RD+L  +  R P +RVI++P  
Sbjct: 123 QLKQKLESEGLFDPARKRALPVFPRTIGIVTSLQAAALRDVLATLKRRTPHIRVILYPTP 182

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD   ++IA AI   +   E       D+++L RGGGSIEDLW FNDE + R IA  +
Sbjct: 183 VQGDGAAQKIAQAIATASYRAE------CDLLLLCRGGGSIEDLWSFNDETVARTIAACT 236

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+I+ IGHETD+T+AD+AADLRAPTPT AAE+A P +    + +  +   L+ +  R +
Sbjct: 237 VPVIAGIGHETDFTIADFAADLRAPTPTAAAELAAPPRAEWIAHIEQVARNLSRMARRHV 296

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +                                               + +  R+   
Sbjct: 297 TDRSQ-------------------------------------------GLDWLSRRLV-- 311

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I+  +  +   Q  +        R      +  +  L                 +
Sbjct: 312 SPAATIRHEQVLLAGWQVRLGNAT----RTPLNNARHALRHLRSQLTSQLPDTRPARWQL 367

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
            +   R+   +  +       +S     L+    + TL+RGY  I D           L 
Sbjct: 368 TEQRRRMASGIGSRTSRLRLQLSGLEAQLELLNPQRTLERGYAIIVDAEGRIARTPAQLH 427

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507
            +  + +   +G A   + +  P   +
Sbjct: 428 AREIVTVRLAEGSARIGIASVQPTLPE 454


>gi|166711792|ref|ZP_02242999.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 445

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 129/492 (26%), Positives = 224/492 (45%), Gaps = 60/492 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A +  + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVELLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +   R+L   +  ++ R      H   +++S        
Sbjct: 298 LALRLRAHSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQHGHAQVQSHNPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +  +                                            
Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +  +  +++     +    R L++ +   T+ RGY  +    + + +     +A   R+ 
Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRSAAEVAAGERLR 428

Query: 487 INFFDGQANAIV 498
               DG     V
Sbjct: 429 AQLADGSIEVRV 440


>gi|30249159|ref|NP_841229.1| exodeoxyribonuclease VII large subunit protein [Nitrosomonas
           europaea ATCC 19718]
 gi|81838736|sp|Q82VC2|EX7L_NITEU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|30180478|emb|CAD85083.1| xseA; exodeoxyribonuclease vII large subunit protein [Nitrosomonas
           europaea ATCC 19718]
          Length = 448

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 60/503 (11%)

Query: 4   FSQKNSLDHPE---YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
            +  N L  P+   + VSEL+ + + I+E     + V GEIS  +    SGH YFSLKD+
Sbjct: 1   MTDHNLLPEPKKILWRVSELNRNARVILEQTFPLLWVSGEISNLKRYP-SGHWYFSLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  ++++     ++++P+EG++      +T +    ++Q+ +E L  +G G L  A 
Sbjct: 60  SAQVRCVMFRHKNLYLDWIPQEGMQVEAQALVTLYEARGEFQLTVEQLRRAGLGALFEAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L +EGLFS ++K P+P  P+ I +ITSP  A +RD+L  +  R P + V+I+P 
Sbjct: 120 ERLKARLQQEGLFSPEYKQPLPRFPRQIGIITSPNTAALRDVLTTLQLRLPSIPVVIYPA 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     I  A+       E       D++IL RGGGSIEDLW FN+E++ RAIA  
Sbjct: 180 PVQGEGSAAAITTALHTAAVRGE------CDVLILCRGGGSIEDLWAFNEEIVARAIAAC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IPI++ IGHETD+T+AD+ AD RAPTPTGAA++A P ++ +   L     RL   + R 
Sbjct: 234 PIPIVTGIGHETDFTIADFVADARAPTPTGAAQLASPDRQAILHRLQYWLHRLQQTMERH 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           I+ ++   + L   L +  + +   +  L +L   L++     +  +         RI S
Sbjct: 294 IERRMQATDLLAHRLIHPGERIRHQQMHLLQLRGRLQNAWNRQVEIRTWRIEETGRRIHS 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                      Q   E    +++ +                                   
Sbjct: 354 AKPDIQAGIRHQQ--ELAARLQRAMAH--------------------------------- 378

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                 R+E  L  K++     +            K  L RGY+       + +   R  
Sbjct: 379 ------RLE-NLQFKLRQQQQHLIH-------LDPKAVLARGYSIAYTARGDILHDSRQT 424

Query: 480 ATKTRILINFFDGQANAIVINKA 502
                + + F  G A A +    
Sbjct: 425 RAGDNVRLVFASGWAKADITETG 447


>gi|319944095|ref|ZP_08018373.1| exodeoxyribonuclease 7 large subunit [Lautropia mirabilis ATCC
           51599]
 gi|319742589|gb|EFV94998.1| exodeoxyribonuclease 7 large subunit [Lautropia mirabilis ATCC
           51599]
          Length = 479

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 110/497 (22%), Positives = 211/497 (42%), Gaps = 37/497 (7%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S +        +V +L+     +++     V V GE+S +    +SGH YF+LK+  + 
Sbjct: 10  ASSQPFTGEQALTVGQLNRMAGRLLQDTFGTVRVVGELSNFT-RAASGHWYFTLKETGAA 68

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A++++ +  ++ F+P EG    V+ ++T +     +Q+ +E +  +G+G +     + 
Sbjct: 69  VRAVMFRMSAQRVGFVPREGDRVEVVARVTLYEARGDFQLGVERMQLAGAGNVWQRFARL 128

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K  L  EGLF    K  +P     + VI+S   A ++D+L  +  R P LRVII+P  VQ
Sbjct: 129 KTLLAAEGLFDPGRKQLLPPYIHTVGVISSLKAAALQDVLTTLRRRAPQLRVIIYPASVQ 188

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G + P         L  ++        D+++L RGGGS EDL  FNDE + R +A  ++P
Sbjct: 189 GQQAPA------ELLAAVEAAEARLECDVLLLVRGGGSFEDLDAFNDETLARRLARCTLP 242

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++S +GHE+D+T+ D+ AD+RAPTPT AAE+    +      L +   RL  ++ R ++ 
Sbjct: 243 VVSGVGHESDFTICDFVADVRAPTPTAAAELVSTDRRESLQRLRHQRVRLQQVMQRQLER 302

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
               L+   + L +  + L     R                         +  R++    
Sbjct: 303 LEQRLDMAERLLRSPARQLQAHGQR----------------------LEQLAERLQRW-P 339

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           +  + +    +    + +++ +        +E + +                     + +
Sbjct: 340 LQELPRQEMRVERLAERLQRAMT----SRLVESQGRWQRAADTLRPPST--AAAGFRLAQ 393

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
              R+        +     + +    L   +    L RGY  ++D + + +T        
Sbjct: 394 AEQRLAHAARGCWQRAAARLEMAENSLALISPLAVLGRGYALVRDADGHLLTTVDEARPG 453

Query: 483 TRILINFFDGQANAIVI 499
            ++ +   DG   A V 
Sbjct: 454 GQVEVRLQDGSLQATVD 470


>gi|325126075|gb|ADY85405.1| Exodeoxyribonuclease VII [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 456

 Score =  340 bits (872), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ P+G G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D AAD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D + N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           L    ++ ++  DGQA   +      K
Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454


>gi|149908787|ref|ZP_01897447.1| exodeoxyribonuclease VII large subunit [Moritella sp. PE36]
 gi|149808061|gb|EDM68002.1| exodeoxyribonuclease VII large subunit [Moritella sp. PE36]
          Length = 417

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 144/471 (30%), Positives = 221/471 (46%), Gaps = 57/471 (12%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  + + GEIS +    +SGH Y SLKD+ S++   ++KG   ++ F P  G + L   +
Sbjct: 1   MGTLWLTGEISNFVA-PASGHWYLSLKDSRSQVRCAMFKGNNRRVTFRPANGQQVLAKVR 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           +T +    +YQ++IESL P+G G L    E+ K  L  +G F+  HK  +P  PK I ++
Sbjct: 60  VTMYEPRGEYQLVIESLSPAGDGLLQQQYEQLKASLDAQGYFAQAHKKALPLHPKRIGIV 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS TGA + DIL  +  R P L VII+P  VQG +    I NAI   N   E       D
Sbjct: 120 TSATGAAVHDILTVLERRSPNLPVIIYPTLVQGAQAASAIVNAINIANQRNE------VD 173

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FN+  +  AI NS +PIISA+GHE D T+AD+ AD+RAPTP+ A
Sbjct: 174 LLIVGRGGGSLEDLWCFNEASVAEAIFNSQLPIISAVGHEIDVTIADFVADMRAPTPSAA 233

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRL 328
           AE+    + HLQ  + NL  RLN  I   +  K +    L ++L   +    L     +L
Sbjct: 234 AELVSQDQAHLQQQVTNLSQRLNKAIQTQLAKKQHQQRYLQQSLMSQHPQHKLQQQNQKL 293

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           D L   L   +   I ++  H   +  R++S   +H     +Q     Q  +   +    
Sbjct: 294 DELSLRLNQAVNRHISKQKLHLTQLTGRLQSRSPVHKFTAMQQQQANFQTRLHSAM---- 349

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                                + R+     H++                         + 
Sbjct: 350 ---------------------QRRLQQEQNHLQ----------------------NLAQQ 366

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           LQ+ +   TL RGY+  Q+     IT    L +  +++  F DG+  + + 
Sbjct: 367 LQTVSPLATLTRGYSITQNDKQQVITSVAKLKSGDKLITRFTDGEIQSTID 417


>gi|21243144|ref|NP_642726.1| exodeoxyribonuclease VII large subunit [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|23821542|sp|Q8PJW7|EX7L_XANAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|21108665|gb|AAM37262.1| exodeoxyribonuclease VII large subunit [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 445

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 56/494 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E     V V  E+S      +SGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNSLARDLLEGGFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLTAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQALPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L          + RL  L R  E     +  R       +  R++           
Sbjct: 298 LALRLRA-----QSPQARLQLLHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNP 352

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++H+   QQ +  +                                            + 
Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488
            +  +++     +    R L++ +   T+ RGY  +    N + +     + T  R+   
Sbjct: 371 AMQRRLQHDQLQLRRIARSLEAVSPLATVARGYAIVTRPANGSVVRSAAEVVTGERLRAQ 430

Query: 489 FFDGQANAIVINKA 502
             DG     V +  
Sbjct: 431 LADGSIEVRVESGE 444


>gi|328956984|ref|YP_004374370.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. 17-4]
 gi|328673308|gb|AEB29354.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. 17-4]
          Length = 454

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 151/504 (29%), Positives = 236/504 (46%), Gaps = 61/504 (12%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
           N L +   +V+ L+ ++K   E +  L  + + GEIS +R   ++ H YFSLKD+H++I 
Sbjct: 7   NKLSNDYLTVTALTKYIKRKFERDPYLERIYLTGEISNFRNRANA-HQYFSLKDDHAKIS 65

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           AI++K    K++F PEEG++ LVIG+I+ +  S  YQI IE + P G G L  ALE+ KK
Sbjct: 66  AIMFKAAFQKLKFTPEEGMKVLVIGRISLYEASGNYQITIEHMEPDGVGALYQALEEMKK 125

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           KL  EGLF    +  IP  PK IAV+TSP+GAVIRDI+  I  RFP ++++I+P  VQG+
Sbjct: 126 KLKNEGLFDAPKQL-IPTFPKRIAVVTSPSGAVIRDIMTTIKRRFPIVQLVIYPTLVQGN 184

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +    I  +I  +            D +ILARGGGSIEDLW FN+E + RAI  +  PII
Sbjct: 185 KAADAIVASIRMV------EEKGDFDTMILARGGGSIEDLWPFNEEKVARAIFEAQTPII 238

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           S++GHETD T+AD  AD+RA TPT AAE++VP+       +  L+ RL     R ++   
Sbjct: 239 SSVGHETDTTIADLVADVRAATPTAAAEISVPLLSEELIKIEQLKLRLVQSYARKVEILN 298

Query: 305 NT--LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                           +       +LD L   L   +E    +     N  + ++ +   
Sbjct: 299 QRLTSQLNSYIFNQPQRLYEGYAQKLDLLTERLVRAMEEKNQQLKNDLNVHMLQLNAQNP 358

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              +++    +    + +   ++ +                                   
Sbjct: 359 TQLVKQKHSDLNVMNKQLTTQMEWY----------------------------------- 383

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                   + ++ K          + L   +    + RGY+     +   I   + +  +
Sbjct: 384 --------MENQTKR----FQYAVQSLDYLSPLKIMNRGYSYAT-KDGKVIKDSKQVEVE 430

Query: 483 TRILINFFDGQANAIVINKAPPKE 506
            +I I+   G   A VI K    +
Sbjct: 431 DKIHIHLHKGTFEAKVIKKEEESK 454


>gi|187478590|ref|YP_786614.1| exodeoxyribonuclease VII large subunit [Bordetella avium 197N]
 gi|123514710|sp|Q2KZF3|EX7L_BORA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|115423176|emb|CAJ49707.1| exodeoxyribonuclease VII large subunit [Bordetella avium 197N]
          Length = 452

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 57/491 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV++L+  +  ++E ++  + VRGE+S +    +SGH YF+LKD  + +  ++++G  
Sbjct: 16  ILSVAQLNQAVGQLMERSIPPLWVRGEVSNFT-QAASGHWYFTLKDAGAAVRTVMFRGRA 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + + F+P  G E  + G+++ +     YQ+  +++  +G G L  A  + K KL  EGLF
Sbjct: 75  SMVGFVPRPGDEVEIRGRVSLYEPRGDYQLQADAMRRAGVGNLFEAFSRLKDKLASEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K     +P+ I V+TS   A +RD+L  ++ R P + ++I+P  VQG +    +A 
Sbjct: 135 DASRKRVPLRLPRAIGVVTSLQAAALRDVLSALARRAPQVEIVIYPAPVQGADAASRLAA 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + Q +  +E       D ++L RGGGSIEDLW FNDE + RA+A+ +IP+IS +GHETD
Sbjct: 195 QVRQASARRE------VDTLLLVRGGGSIEDLWSFNDEDLARAVADCAIPVISGVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ ADLRAPTPT AAE+A   +  L S+                            
Sbjct: 249 FTIADFVADLRAPTPTAAAELACVPRAELLSA---------------------------- 280

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L ++   LS ++ R   L  +                +    ++        +    + 
Sbjct: 281 -LGHAASRLSRAQQRRLDLAAQ--------------RLDRASAQLV--SPAQRLAHQCER 323

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +  +        +        ++  L     +   +   +   ++ L  R+     
Sbjct: 324 LNTLRHRLAASA----QRPLAASAARLTGLAQRLARRAPQTARVQDRVQSLAQRLLRGQQ 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +      +      L++   ++TL RGY  ++D     ++    L     + I+   G
Sbjct: 380 AGLAERGVRLQALAAQLRALDPEHTLARGYAVLRDAQGRVVSNASALVVGEGVRIDLAQG 439

Query: 493 QANAIVINKAP 503
           +  A + +  P
Sbjct: 440 RVQADITDVQP 450


>gi|84624239|ref|YP_451611.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|123521754|sp|Q2P290|EX7L_XANOM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|84368179|dbj|BAE69337.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 445

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 56/490 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A +  + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L   +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVPRVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L          + RL  L R  E     +  R  +    +  R++           
Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++H+   QQ +  +                                            + 
Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488
            +  +++     +    R L++     T+ RGY  +    + + +     +A   R+   
Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430

Query: 489 FFDGQANAIV 498
             DG     V
Sbjct: 431 LADGSIEVRV 440


>gi|170693527|ref|ZP_02884686.1| exodeoxyribonuclease VII, large subunit [Burkholderia graminis
           C4D1M]
 gi|170141682|gb|EDT09851.1| exodeoxyribonuclease VII, large subunit [Burkholderia graminis
           C4D1M]
          Length = 489

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 138/509 (27%), Positives = 241/509 (47%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MN  S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 31  MNSDSSLTSSTMPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 89

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF P+EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 90  IKDAQAQMRCVMFRGRAQYAEFTPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 149

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 150 YEAFLRLKAQLEAEGLFAAERKRALPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 209

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +  ++  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 210 VYPAPVQGVGASAKLAAMVDAVSARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 263

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S++P++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 264 IAESAVPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 323

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+    
Sbjct: 324 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSARLASAGARPVRDARARFS---- 379

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
                 L    Q+ R  +   Q  +  + ++    +  + + + A               
Sbjct: 380 -----LLQMRWQRWRPDLAAHQARLGNLTQRLDAALLRQHERQAAR-------------- 420

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
                                     ++  +  L+  + + TL+RGY ++ D      + 
Sbjct: 421 --------------------------IATLSARLEVLSPQRTLERGYAAVLDAQTGRAVR 454

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +  P
Sbjct: 455 APSSLKPGRRLTMHLAEGTADVALADVQP 483


>gi|116514373|ref|YP_813279.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|122274895|sp|Q049N1|EX7L_LACDB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116093688|gb|ABJ58841.1| Exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 456

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 144/507 (28%), Positives = 249/507 (49%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ PSG G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPSGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D AAD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D + N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           L    ++ ++  DGQA   +      K
Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454


>gi|188576156|ref|YP_001913085.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|226697622|sp|B2SHP3|EX7L_XANOP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|188520608|gb|ACD58553.1| exodeoxyribonuclease VII, large subunit [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 445

 Score =  339 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 56/490 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A +  + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQLLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L   +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVPRVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L          + RL  L R  E     +  R  +    +  R++           
Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++H+   QQ +  +                                            + 
Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488
            +  +++     +    R L++     T+ RGY  +    + + +     +A   R+   
Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430

Query: 489 FFDGQANAIV 498
             DG     V
Sbjct: 431 LADGSIEVRV 440


>gi|313124104|ref|YP_004034363.1| exodeoxyribonuclease 7 large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280667|gb|ADQ61386.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 456

 Score =  339 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 144/507 (28%), Positives = 251/507 (49%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ P+G G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D AAD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D ++N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASDNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           LA   ++ ++  DGQA   +      K
Sbjct: 428 LAPGDQVHLHLKDGQAIGRIEEIKEGK 454


>gi|56964230|ref|YP_175961.1| exodeoxyribonuclease VII large subunit [Bacillus clausii KSM-K16]
 gi|81822079|sp|Q5WF60|EX7L_BACSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|56910473|dbj|BAD65000.1| exodeoxyribonuclease VII large subunit [Bacillus clausii KSM-K16]
          Length = 458

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 151/492 (30%), Positives = 248/492 (50%), Gaps = 60/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           ++VSE + ++K ++E +  L  + +RGE+S ++  H+ GH YF++KD  SR+ A+++ G 
Sbjct: 11  WTVSEATRYIKQLLEDDPHLPEIWIRGELSNFK-QHTRGHMYFTIKDEGSRMQAVMFAGY 69

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F PE G+  L+ G+I  +    +YQ   + + P G G+L    E+ KK L  EGL
Sbjct: 70  NRFLRFKPENGMNVLIRGEINVYEPYGQYQFYAKEMQPDGIGSLFAEYERLKKALEAEGL 129

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+++ K PIP  P  IA+ITSPTGAVIRD++  +  R+P +RV +FPV VQG+  P  I+
Sbjct: 130 FAEERKRPIPRFPTHIAIITSPTGAVIRDMMTTLKRRYPQIRVTLFPVLVQGEGAPLSIS 189

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ Q             D++I+ARGGGSIE+LW FN+EM+ RAIA +++P+ISA+GHET
Sbjct: 190 RALEQ------ASMANIFDVVIVARGGGSIEELWAFNEEMVARAIAEAAVPVISAVGHET 243

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T++D+AAD RAPTPT AAE AVP    L   + +L+ RL   ++  +K +   L  L 
Sbjct: 244 DFTISDFAADRRAPTPTAAAEFAVPDARELMEHIGHLKKRLERSLVEQVKTRRRELERLK 303

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           ++       Q +     +LD L   L   ++I + +K   F H+   I        + + 
Sbjct: 304 RSYAFRYPVQLVHQKEQQLDGLMERLNRAMQIKLEQKTLAFKHMNQAILRQHPATRVSQL 363

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++   +    + + +                                         R   
Sbjct: 364 QKERRQNHARLVRAMAAE------------------------------------TQRKRQ 387

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            LS  I+            LQ  +    + RGY+ +   +   +   +++  +  I++  
Sbjct: 388 SLSAVIQQ-----------LQLLSPLAVMDRGYSLVY-KDEALVKTAKDVEIEDDIVVKL 435

Query: 490 FDGQANAIVINK 501
            DG  +  V+ K
Sbjct: 436 ADGNLHCQVVGK 447


>gi|210622492|ref|ZP_03293197.1| hypothetical protein CLOHIR_01145 [Clostridium hiranonis DSM 13275]
 gi|210154205|gb|EEA85211.1| hypothetical protein CLOHIR_01145 [Clostridium hiranonis DSM 13275]
          Length = 466

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 145/500 (29%), Positives = 243/500 (48%), Gaps = 39/500 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++     +SE + ++K ++ ++  L ++ VRGEIS ++ I+SSGH Y +LKD  S++  +
Sbjct: 1   MEIRALEISEANSYIKKVLSNDPILYNLKVRGEISNFK-INSSGHVYLTLKDETSKMKCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           I+KG  +K     E+G++ +  G I+ +     YQ+ I  +   G G L    E+ KKKL
Sbjct: 60  IFKGNYDK-SLQLEDGMKIVANGYISVYERDGAYQLYIRKVEKDGVGNLHIEFERLKKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF  + K  IP++PK I V+TS TGAVIRDI+  +  RFP + V ++PV VQG   
Sbjct: 119 NREGLFDPRFKKKIPYMPKSIGVVTSQTGAVIRDIINVVRRRFPKVNVYLYPVAVQGANS 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI   I   N ++        D +I+ RGGGS+E+LW FN+E + RAI  S IPIISA
Sbjct: 179 ADEIVKGIEFFNKMQ------NVDTMIVGRGGGSLEELWSFNEEKVARAIFASDIPIISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ +D+RAPTP+ AAE+AVP    +   L N +++L N +  +I+   N 
Sbjct: 233 VGHEVDYTICDFVSDMRAPTPSAAAEIAVPDLNEVLYRLDNCKSQLKNNMSAVIERDRNK 292

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            ++   ++     +  +   +  L+ +  +L   +E  I ++     +    I S     
Sbjct: 293 ADNTFNSICTIVKNDVIKSGKNNLELISNKLTRGIESKIEKEKYQLENNFLEICSIVKNE 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ + ++      IE                             N+I      +    
Sbjct: 353 VIKEGKNNLKVISNRIE-------------------------NSISNKIDIEKYRLDTAS 387

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +   + S   ++  T  +L S +   T+ RGY  +Q      +    ++     
Sbjct: 388 VNMVNSMEQIMSSKKENMRNTGALLHSLSPLATIDRGYCMVQ-KEGKTVNSTEDINVGES 446

Query: 485 ILINFFDGQANAIVINKAPP 504
           + I   DG A+  V +    
Sbjct: 447 LSIMMSDGNADCTVNSIEKK 466


>gi|294626016|ref|ZP_06704626.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599686|gb|EFF43813.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 445

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 129/496 (26%), Positives = 225/496 (45%), Gaps = 60/496 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ L  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHLEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +   R+L   +  ++ R          +++S        
Sbjct: 298 LALRLRVQSPQARLQLFHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +  +                                            
Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +  +  +++     +    R L++ +   T+ RGY  +    + + +     + T  R+ 
Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRNAAEVVTGERLR 428

Query: 487 INFFDGQANAIVINKA 502
               DG     V +  
Sbjct: 429 AQLADGSIEVRVESGE 444


>gi|124007174|sp|Q5GZ80|EX7L_XANOR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 445

 Score =  339 bits (869), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 222/490 (45%), Gaps = 56/490 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A +  + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L          + RL  L R  E     +  R  +    +  R++           
Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++H+   QQ +  +                                            + 
Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488
            +  +++     +    R L++     T+ RGY  +    + + +     +A   R+   
Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430

Query: 489 FFDGQANAIV 498
             DG     V
Sbjct: 431 LADGSIEVRV 440


>gi|91785012|ref|YP_560218.1| exodeoxyribonuclease VII large subunit [Burkholderia xenovorans
           LB400]
 gi|91688966|gb|ABE32166.1| Exodeoxyribonuclease VII large subunit [Burkholderia xenovorans
           LB400]
          Length = 459

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 142/509 (27%), Positives = 238/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MNP S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRPLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +   N  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGAGVSGKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASGGTRPVRDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++  +R  +      ++  + +                             
Sbjct: 354 RWQRWRP--DLAGHRAKLGNLAGRLDTALLRQH-------------------------ER 386

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + + TL+RGY ++ D      + 
Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +  P
Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQP 453


>gi|85712715|ref|ZP_01043760.1| exodeoxyribonuclease VII large subunit [Idiomarina baltica OS145]
 gi|85693447|gb|EAQ31400.1| exodeoxyribonuclease VII large subunit [Idiomarina baltica OS145]
          Length = 439

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 53/485 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V++L+  ++  +E    HV + GEIS +    +SGH Y +LKD  ++I   +++G  
Sbjct: 3   IYTVTQLNSDIRKAIEQGFGHVWLMGEISNF-AAPNSGHWYLTLKDERAQIRCAMFRGNN 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            + +  P+ G++ LV G++T +     YQ+I+E +  +G G L    E+ K KL  EGLF
Sbjct: 62  QRAKVRPQNGLQVLVRGRVTVYEPRGDYQLIVEHMEEAGIGLLQQQFEQLKVKLAAEGLF 121

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P   + + VITSPTGA I+D+L  +  R P + VII+P  VQGD    +I  
Sbjct: 122 AQERKRPLPEHIRRVGVITSPTGAAIQDVLAVMKRRDPSVDVIIYPTAVQGDAAIPQI-- 179

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                N L         D++I+ RGGGS+EDLW FNDE + R + ++ +P+ISAIGHE D
Sbjct: 180 ----KNALHTAFQRNEVDVLIVTRGGGSLEDLWCFNDEQVGRLLLDAPVPVISAIGHEVD 235

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ ADLRAPTP+ AAE     +    +                             
Sbjct: 236 FTICDFIADLRAPTPSAAAEQVTQDRSAQVNR---------------------------- 267

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L    Q L+  + R       L   L+I + +++          + D L+  + + +Q 
Sbjct: 268 -LQQLQQRLATGQKRRIERQHSLLQQLQIRLNQQHPQRQLQQQSQRLDELLARVYRAQQR 326

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
            L  QQ   Q      R   +  + +++       Q + RI  +              L 
Sbjct: 327 TLVNQQQRRQ--HAIQRLQQVHPQRELSRAQQKLSQIQQRIPLVAEAW----------LK 374

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
            + +     +      L   +  NTL RGY  ++D   + ITQ      + ++ +    G
Sbjct: 375 QQHQRQRALLHA----LNLVSPLNTLDRGYAIVRDEEGHVITQPEQTQAEQKLSVKVAGG 430

Query: 493 QANAI 497
           + N  
Sbjct: 431 EFNVR 435


>gi|307730800|ref|YP_003908024.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. CCGE1003]
 gi|307585335|gb|ADN58733.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1003]
          Length = 459

 Score =  339 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 140/509 (27%), Positives = 238/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MN  S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNSDSPFTSSTLPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF+P+EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFMPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRTLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +   +  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGAGASAKLAAMVEAASARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L    A L   
Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDQRHATLARG 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRMHLQQLSARLTSAGARPVRDARARFSLLHM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++  +R  +    Q ++  + +                             
Sbjct: 354 RWQRWRP--DLDAHRARLDGLAQRLDAALLRQHERQVA---------------------- 389

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + + TL+RGY ++ D      + 
Sbjct: 390 ---RIATLSAR----------------------LEVLSPQRTLERGYAAVLDAQTGRAVR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +  P
Sbjct: 425 APASLKPGRRLTVHLAEGAADVALSDVQP 453


>gi|296157202|ref|ZP_06840038.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. Ch1-1]
 gi|295892538|gb|EFG72320.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. Ch1-1]
          Length = 459

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/509 (27%), Positives = 239/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MNP S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRPLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +   N  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGAGVSAKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASAGTRPVRDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++  ++  +    Q ++  + +                             
Sbjct: 354 RWQRWRP--DLAGHQAKLGNLAQRLDMALLRQH-------------------------ER 386

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + + TL+RGY ++ D      + 
Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +  P
Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQP 453


>gi|104774288|ref|YP_619268.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|123077235|sp|Q1G9H2|EX7L_LACDA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|103423369|emb|CAI98225.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 456

 Score =  339 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/507 (28%), Positives = 248/507 (48%), Gaps = 58/507 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  D    +VSEL++++K   + +  L  + ++GE+S +R     GH YFSLKD+ 
Sbjct: 1   MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           S+I+ ++++G  +K++F PEEG++  V G+++T+     YQ   +S+ P+G G L     
Sbjct: 60  SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180
           + ++KL +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RF    + +FP +
Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFSHAEIDLFPAQ 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+     + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    
Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS++GHETD TL D AAD RA TPT AAEMA P    + + +  L+ RL   I  +I
Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294

Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     +    +       ++D+L ++L   +E+I+  + +  + +  R++
Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  I++ +Q      + +E  +K+ L       ++                     
Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                                       + L  ++   TL RGY+   D + N +   + 
Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427

Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505
           L    ++ ++  DGQA   +      K
Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454


>gi|74317529|ref|YP_315269.1| exodeoxyribonuclease VII large subunit [Thiobacillus denitrificans
           ATCC 25259]
 gi|123745467|sp|Q3SIR1|EX7L_THIDA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|74057024|gb|AAZ97464.1| Exonuclease VII, large subunit [Thiobacillus denitrificans ATCC
           25259]
          Length = 451

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 144/492 (29%), Positives = 219/492 (44%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   +  +ES L  + V GE+S +    +SGH YFSLKD  +++  ++++G  
Sbjct: 16  VLSVSELNRMARRALESQLPLLWVEGEVSNF-MRAASGHWYFSLKDATAQVRCVMFRGRN 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              EF P  G    +    + +    ++Q+  ES+  +G+G L  A  + K KL  EGLF
Sbjct: 75  QFAEFTPANGDHVEIRALPSLYEARGEFQLGAESIRRAGAGRLYEAFVRLKAKLEGEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P  P+ + V+TSP  A +RD+L  +  R P L VI++P  VQG     +IA 
Sbjct: 135 DPAKKRALPRFPRCLGVVTSPQAAALRDVLTALGRRMPGLPVILYPTPVQGSGAGAQIAA 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI    T  E       D++++ RGGG++EDLW FNDE + RAIA S IP++S +GHETD
Sbjct: 195 AIRAAGTRAE------CDVLLVCRGGGALEDLWAFNDEAVARAIAASPIPVVSGVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+AADLRAPTPT AAE+A PV E +  +L      L     R  +  +  L+ L +
Sbjct: 249 FTLADFAADLRAPTPTAAAELASPVAEEMLRALERHARLLRQHHARRQQADMQRLDYLAR 308

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  Q L   +  + +L + L   +   + R+      +    +     H +Q+ +Q 
Sbjct: 309 RLIHPAQQLRRRQLGIAQLAQRLHGAVRARLTREQLRIAQLGE--RRTSPRHALQRQQQV 366

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +        +  +       L                                       
Sbjct: 367 LESLGARAARAAESARIGRGLTLAR----------------------------------- 391

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                           L      N L RGY+ +Q  N   +     L     + I F  G
Sbjct: 392 ------------LASSLAHLNPDNVLARGYSIVQQENGAVVHDAATLRAGDGLEIRFHRG 439

Query: 493 QANAIVINKAPP 504
            A+A V +  P 
Sbjct: 440 AAHARVESAQPE 451


>gi|325923182|ref|ZP_08184867.1| Exodeoxyribonuclease VII large subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546327|gb|EGD17496.1| Exodeoxyribonuclease VII large subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 453

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 129/494 (26%), Positives = 224/494 (45%), Gaps = 60/494 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNTLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K P+P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +    AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAHARMAQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +   R+L   +  ++ R          R+ +        
Sbjct: 298 LALRLRAHSPQARLQLLHRRQEDAGRQLRARMTQVLERLQARVQRGQARLHAHNPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                +   QQ ++ +  Q                                    +  R+
Sbjct: 355 ----DLANLQQRLQALHPQ----------------------------------AAMQRRL 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRIL 486
           +             +    R L++ +   T+ RGY  +    + + +     ++   R+ 
Sbjct: 377 QH--------DQLRLRGLARSLEAVSPLATVARGYAIVTRPTDGSVVRSAGEVSPGERLR 428

Query: 487 INFFDGQANAIVIN 500
               DG     V +
Sbjct: 429 AQLADGSIEVRVES 442


>gi|330686013|gb|EGG97636.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           VCU121]
          Length = 445

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 150/492 (30%), Positives = 239/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LTVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLSKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F + +K PIP  PK IAV+T+ TGA IRDI   I+ R+P +  +     VQG +   +I 
Sbjct: 124 FDNSNKKPIPRFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQVQISTLVQGKQAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   + L         D II+ RGGGSIEDLW+FN+E +V+AI     PIISA+GHET
Sbjct: 184 EKIKYADQL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIFECQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA MA P +  L   +   +  L   I + ++     L  L 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVMATPDQYELLQQIKQYQFTLTRHIKQYVEQHKKHLEHLA 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L ++L   L   + ++    N +  R     L  +I +N
Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLEKQLNQKLASKLEQQQHQLNILKQRFNPKHLETSIVRN 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q   + +  + Q                                     I   +++ + 
Sbjct: 357 QQQNGQLKSRLTQ------------------------------------KINNDLSQYKN 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L  KI+            L   +  NT+ RGY  + + +++ +T  ++++    I++  
Sbjct: 381 ALKSKIEQ-----------LNQLSPTNTMLRGYAIV-NKDDDVVTSTKDMSENDEIVLTM 428

Query: 490 FDGQANAIVINK 501
            DGQ +AIV   
Sbjct: 429 KDGQIDAIVKKV 440


>gi|227513487|ref|ZP_03943536.1| exodeoxyribonuclease VII large subunit [Lactobacillus buchneri ATCC
           11577]
 gi|227083360|gb|EEI18672.1| exodeoxyribonuclease VII large subunit [Lactobacillus buchneri ATCC
           11577]
          Length = 452

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 164/502 (32%), Positives = 258/502 (51%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV+ L+ ++K    V+  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   N+I+F+PEEG++ LV G I+ +  S  YQI ++S+ P G G L  A E+ KKKL
Sbjct: 60  MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLFS   +  + F PK IAV+TSP+GAV+RDI+  +  R+P+ ++++FP  VQGDE 
Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVVRDIITTVRRRYPIAQIVLFPALVQGDEA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I+++N L         D +I+ RGGGSIEDLW FN+E + RAI+ S+IP+IS+
Sbjct: 179 STDIVRQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISASTIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVP  + +   L   + R+ N   +LI+     
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKTTQNRIINAEYQLIEQAKLR 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L +     +  +       +LD L + LE+  + +   +  + + +  R++     +
Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKVTASRKNNLSQLHMRLRLVAPTY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ +Q +   Q  ++Q                                          
Sbjct: 353 MIKEQKQRLNVLQLRLKQ------------------------------------------ 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +        +    L   +    L RGYT   D N++FI++  +L  K  
Sbjct: 371 -----SQLQNLNKVKQQYLMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I ++F DG  NA +      KE
Sbjct: 425 INVHFSDGVINASINKMTKGKE 446


>gi|294666465|ref|ZP_06731708.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603771|gb|EFF47179.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 445

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 225/496 (45%), Gaps = 60/496 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ L  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHLEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 M------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +   R+L   +  ++ R          +++S        
Sbjct: 298 LALRLRVQSPQARLQLFHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +  +                                            
Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +  +  +++     +    R L++ +   T+ RGY  +    + + +     + T  R+ 
Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRNAAEVVTGERLR 428

Query: 487 INFFDGQANAIVINKA 502
               DG     V +  
Sbjct: 429 AQLADGSIEVRVESGE 444


>gi|325273795|ref|ZP_08139984.1| exodeoxyribonuclease VII large subunit [Pseudomonas sp. TJI-51]
 gi|324101076|gb|EGB98733.1| exodeoxyribonuclease VII large subunit [Pseudomonas sp. TJI-51]
          Length = 462

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/500 (28%), Positives = 238/500 (47%), Gaps = 57/500 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF ++  LD    +VS+L+   + ++E     V V GEIS      +SGH YF+LKD+ 
Sbjct: 7   DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 64

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++     +G+   V GK++ F G   YQ+I++++ P+G G L  A E
Sbjct: 65  AQVRCALFRQSATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 124

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLFS + K P+P  P+ I +ITSPTGAVIRDI+     R P + + + P  
Sbjct: 125 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 184

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  AI   + L         D +ILARGGGS+EDLW FN+E + RA+A   
Sbjct: 185 VQGREAIAQIVRAIRLADGL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    ++  L  L+ RL   +   +
Sbjct: 238 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGIRQRLEGLQRRLLLRMQNRL 297

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +    L+SL + L +  + L     RLD L   L     + + ++         R+ + 
Sbjct: 298 SHDRLRLDSLTRRLRHPGERLRQQAQRLDDLDMRLRRAFLLSLNQRRERLARAETRLAAQ 357

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               N++   Q +    + + + +++              +L   R++ + ++       
Sbjct: 358 HPGRNLKLLAQRLDSLAERLPRAMRE--------------LLKDRRQRFQTQL------- 396

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                     + LQ  +   TL RGY+ + D     I       
Sbjct: 397 --------------------------QTLQVVSPLATLARGYSILLDDQGQAIRSAEQTR 430

Query: 481 TKTRILINFFDGQANAIVIN 500
              R+      G+    V +
Sbjct: 431 NGQRLTARLDQGELLVRVED 450


>gi|329896813|ref|ZP_08271729.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC3088]
 gi|328921568|gb|EGG28948.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC3088]
          Length = 456

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 145/499 (29%), Positives = 230/499 (46%), Gaps = 52/499 (10%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
           Q ++ D  EY+VS L+   + ++E +   + V GEIS +    SSGH YFSLKD+++++ 
Sbjct: 6   QPHNADTQEYTVSALNGAARRLLEGHFQILWVVGEISNFT-RASSGHWYFSLKDDNAQVR 64

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             ++K     ++F+P+ G +  +  K++ + G  ++Q+I E + P+G+G L  A  + K 
Sbjct: 65  CAMFKNRNQFLKFIPKHGDKVRLRAKVSLYEGRGEFQLIGEYIEPAGTGDLQLAFIQLKA 124

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184
           +L  EGLF+ + K  IP   K I VITS  GA + DIL  +  R+  L VII    VQG 
Sbjct: 125 QLEAEGLFAPERKKSIPSQVKRIGVITSAKGAALHDILSVLHGRWAGLEVIIADTPVQGA 184

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E P  +  A+ +L    E       DI+I+ RGGGS+EDLW FN+E + R IA   IP I
Sbjct: 185 EAPAGLTYALHKLARFHETAP---IDIVIIGRGGGSLEDLWAFNNEQLARTIAAYKIPTI 241

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD+T+ D+ AD RAPTP+ AA MA P      S +     RL+     ++K K 
Sbjct: 242 SAVGHETDFTICDWVADARAPTPSAAAAMASPDHSKAPSRIHEALVRLSKGYTAILKTKG 301

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L +    L +  + +     R+D L   L+     +  +K   +  +  R+       
Sbjct: 302 TELRNSRARLRHPGELIEQRVLRIDELELRLKAQQSRLTQQKTAQYQQLFKRLSWHSPAR 361

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N++   + +L+ Q  +                                            
Sbjct: 362 NLRALNEQVLKLQTRLI------------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     + +       T  +L S +   T+ RGY  +++ + + +T     A KT+
Sbjct: 379 ----SGQQRLLSAHTGRHKQTEYVLHSLSPMRTVDRGYAILRNADGHVVTGVSGFAEKTK 434

Query: 485 ILINFFDGQANAIVINKAP 503
                 DGQ N  V    P
Sbjct: 435 GSATLKDGQINFEVSAINP 453


>gi|209522452|ref|ZP_03271053.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. H160]
 gi|209497114|gb|EDZ97368.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. H160]
          Length = 459

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 142/509 (27%), Positives = 231/509 (45%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           M P +   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MTPENPFASAATPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  ++I  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQIRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRTLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +      +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGAGVSAKLAAMVEAAGARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 234 IAESVIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRAVLLRELDHRHATLARA 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L   R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLERQRTHLQQLRVRLASAGARPVRDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++   R  I    Q +   + +                             
Sbjct: 354 RWQRWRP--DLAAERTRIDTLAQRLNAALSRQHERQVA---------------------- 389

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + K TL+RGY ++ D      I 
Sbjct: 390 ---RIDMLGAR----------------------LEVLSPKRTLERGYAAVLDAQSGRAIR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +   
Sbjct: 425 TASSLKPGRRLTMHLAEGSADVALADVQA 453


>gi|15615346|ref|NP_243649.1| exodeoxyribonuclease VII large subunit [Bacillus halodurans C-125]
 gi|14194728|sp|Q9K967|EX7L_BACHD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|10175404|dbj|BAB06502.1| exodeoxyribonuclease VII (large subunit) [Bacillus halodurans
           C-125]
          Length = 458

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 157/501 (31%), Positives = 241/501 (48%), Gaps = 60/501 (11%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            P  +VSE++ HLK  +E +  L  V +RGEIS ++  HS GH YF+LKD H+++ A+++
Sbjct: 5   QPILTVSEVTRHLKRTIEDDPLLQDVWMRGEISNFKH-HSRGHMYFTLKDEHAKMSAVMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F PE G++ +V G++  +    +YQ+    + P G G L  A E+ K++L +
Sbjct: 64  AGNNRFLNFKPENGMKVIVRGEVNVYEPFGQYQLYALEMQPDGIGNLYLAYEQLKERLEQ 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF +++K P+P + + IA++TSPTGA IRDI   I  RFP+ ++ + PV VQG+E P 
Sbjct: 124 EGLFKEENKKPLPPVARQIAIVTSPTGAAIRDIASTIKRRFPVAQLTLLPVLVQGEEAPH 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA AI Q N           D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA+G
Sbjct: 184 SIAKAIRQAN------EVGGFDLLIVGRGGGSIEELWAFNEELVARAIYQSVIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ AD+RA TPTGAAE+AVP  + L S +     RL      L+K +   L 
Sbjct: 238 HETDYTIADFVADVRAATPTGAAELAVPDLKELISRVNQYTERLKRAQHELLKRQKEHLQ 297

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L K+       Q +      LD+    L  +   ++       + +  R+K        
Sbjct: 298 RLQKSYAFRYPAQLVKQKELELDQQLERLTKHQRRMVSDAKDRLSQLEYRLKRIHP---- 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
                     +  + Q  +  ++   L KKE   ++    +Q +  I             
Sbjct: 354 ----------EGRLRQAEQARVKLEVLLKKEFQQMMERKEQQFQQAISS----------- 392

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRI 485
                                 L   +    ++RGY           I   + +    R+
Sbjct: 393 ----------------------LNLLSPLRVMERGYALPYKAKTQELIKSVKQVRMNDRL 430

Query: 486 LINFFDGQANAIVINKAPPKE 506
            +   DGQ    V        
Sbjct: 431 HLRVTDGQLICDVKEIESESG 451


>gi|226946018|ref|YP_002801091.1| exodeoxyribonuclease VII large subunit [Azotobacter vinelandii DJ]
 gi|259646284|sp|C1DE08|EX7L_AZOVD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226720945|gb|ACO80116.1| exodeoxyribonuclease VII large subunit [Azotobacter vinelandii DJ]
          Length = 456

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 145/508 (28%), Positives = 236/508 (46%), Gaps = 57/508 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF Q+  LD    +VS+L+   + ++E   + V V GEIS      +SGH YF+LKD  
Sbjct: 4   DPF-QRLGLDREILTVSQLNGRARALLEDVFAQVWVEGEISNL-ARPASGHLYFTLKDRQ 61

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++    ++  +  +G+   V G+++ + G   +Q+I++ L P+G G L  A E
Sbjct: 62  AQVRCALFRQNALRVREILRDGLAVRVRGRVSLYEGRGDFQLILDLLEPAGDGALRLAFE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+KL  EGLF+ + K P+P  P+ I +++SPTGAVIRDI+     R P + + + P  
Sbjct: 122 ALKEKLAAEGLFAAERKRPLPAHPRSIGIVSSPTGAVIRDIVSVFRRRAPQVELTLVPTA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I +A+   +           D +ILARGGGS+EDLW FN+E++ RA+A  +
Sbjct: 182 VQGREAVAQIVHALELADRQ-------GFDALILARGGGSLEDLWCFNEEVVARAVAACA 234

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SA+GHETD T+AD+ ADLRAPTP+ AAE+  P    LQ  L  L+ RL   +  L+
Sbjct: 235 TPVVSAVGHETDVTIADFVADLRAPTPSAAAELLAPDSSDLQRRLDGLQRRLQLRMRHLL 294

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+ L + L +  + L     RLD L   L   ++  +         +  R+ + 
Sbjct: 295 AARRLQLDGLSRRLRHPGERLQQQAQRLDDLELRLRRAMQRRLQGDAERLARLDTRLAAQ 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ +    + + + +                                 + +
Sbjct: 355 HPERLLGLLRQRLEHLAERLPRAM--------------------------------RSTL 382

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++   R+E                    LQ+ +   TL RGY  + D     I       
Sbjct: 383 RERRQRLEATAQT---------------LQAVSPLATLGRGYAILLDERGRAIRAAVQAH 427

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQP 508
              R+     +G     V    P   QP
Sbjct: 428 PGQRLHARLAEGALELRVEAAFPSPPQP 455


>gi|237747399|ref|ZP_04577879.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes
           HOxBLS]
 gi|229378750|gb|EEO28841.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes
           HOxBLS]
          Length = 459

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 145/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +      +V+EL+  +  I+E +   V + GEIS +    +SGH YF+LKD  +++ AI+
Sbjct: 17  NASSTVLTVTELNNTVAEILECSFPLVWIAGEISNFT-RAASGHWYFTLKDKMAQVRAIM 75

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    ++F P+EG +  V   ++ +     +Q+ +E++  +GSG L  A    K KL 
Sbjct: 76  FKGRTQSVDFFPKEGDKVEVRATVSLYTARGDFQLNVEAIRHAGSGNLYEAFLHLKSKLE 135

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           EEGLFS + K PIP   + I ++TSP  A +RD+L  +  R P +R++++PV VQGD   
Sbjct: 136 EEGLFSGERKRPIPAFARTIGIVTSPQAAALRDVLTTLGRRAPHIRLVLYPVPVQGDGAA 195

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           ++IA  +   +   E       D++++ RGGGSIEDLW FN+E++ RAIA  +IP +S I
Sbjct: 196 EKIARMLTVASDRAE------CDVLLICRGGGSIEDLWSFNEEIVARAIAACAIPTVSGI 249

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ +DLRAPTPT AAE+A         ++     +L  II RL+   + T 
Sbjct: 250 GHETDFTIADFVSDLRAPTPTAAAEVATRTHRDWMDAIGIHAGKLQYIIKRLLHNAMQTA 309

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           ++L K L +        R +L+ L   L+H    ++       +H+   +KS     +  
Sbjct: 310 DNLAKRLISPATHTERERIKLNALTARLKHVSSNLLVASRYELSHLNTCLKSRLP--DTV 367

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R  +  + + + Q +               ++L   R+ T                  
Sbjct: 368 QLRTDLANQSKQLSQGMS--------------SLLAHRRQST------------------ 395

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
            F+L  +++                + + TL+RGY  + DT    I     L  +  + +
Sbjct: 396 -FLLDSQLE--------------LLSPERTLERGYAIMTDTRGQIIRSPEQLPVRKPVSV 440

Query: 488 NFFDGQANAIVINKAP 503
               G A   + +  P
Sbjct: 441 QLAKGSAKISIESVQP 456


>gi|194016883|ref|ZP_03055496.1| exodeoxyribonuclease VII, large subunit [Bacillus pumilus ATCC
           7061]
 gi|194011489|gb|EDW21058.1| exodeoxyribonuclease VII, large subunit [Bacillus pumilus ATCC
           7061]
          Length = 448

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 140/492 (28%), Positives = 235/492 (47%), Gaps = 60/492 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+ L+ ++K    V+ +L  + ++GE+S  + IHS GH YF+LKD ++R+ A++++ + 
Sbjct: 8   TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHVYFTLKDENARMQAVMFQRSA 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K+ F P+ G++  V G I  +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  AKLPFSPKSGMKVFVRGGIQVYEPSGNYQLYAKEMQPDGVGALHLAYEELKKKLASEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
             ++K PIP  P+++ VITSPTGA +RD++  I+ R+   ++I+ P  VQG+   + I  
Sbjct: 127 DARYKKPIPEYPEVVGVITSPTGAAVRDVITTINRRYQQAKIIVLPALVQGEHATRSIVE 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                  +KE       D++I+ RGGGSIE+LW FN+E + RAI  S IPIISA+GHETD
Sbjct: 187 ------RIKEANEKQLCDVLIVGRGGGSIEELWAFNEEAVARAIFASDIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RAPTPTGAAE+AVP    L   + +++ RL   +        + L +L  
Sbjct: 241 FTISDFTADMRAPTPTGAAELAVPSTTDLIERIKSIDIRLTRAVKNRTSQAKDRLVALQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +       + D +    +  L   I  K    +    R+K       + + +
Sbjct: 301 SYAFRFPKRLQEQKEQQFDLVFDRFQKQLSRQIELKRSQLDRQTYRLKPLHPKEQLLQAK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +    + + + + +   ++ I                                       
Sbjct: 361 KRHANETEQLIRSMNVQMKTI--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L +      ++RGY+     +   I     + T+ ++ I   
Sbjct: 382 --------HSQFQSVLGKLNALNPLQVMERGYSLAYKED-ELIKSVNQVETQDQLTITMK 432

Query: 491 DGQANAIVINKA 502
           DG+    VI K 
Sbjct: 433 DGRLICEVIEKE 444


>gi|157692929|ref|YP_001487391.1| exodeoxyribonuclease VII large subunit [Bacillus pumilus SAFR-032]
 gi|166919631|sp|A8FF14|EX7L_BACP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157681687|gb|ABV62831.1| exodeoxyribonuclease VII large subunit [Bacillus pumilus SAFR-032]
          Length = 448

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 236/492 (47%), Gaps = 60/492 (12%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+ L+ ++K    V+ +L  + ++GE+S  + IHS GH YF+LKD ++R+ A++++ + 
Sbjct: 8   TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHVYFTLKDENARMQAVMFQRSA 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K+ F P+ G++  V G I  +  S  YQ+  + + P G G L  A E+ KKKL  EGLF
Sbjct: 67  AKLPFSPKSGMKVFVRGGIQVYEPSGNYQLYAKEMQPDGVGALHLAYEELKKKLASEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
             ++K PIP  P+++ VITSPTGA +RD++  I+ R+   ++I+ P  VQG+   + I  
Sbjct: 127 DARYKKPIPEYPEVVGVITSPTGAAVRDVITTINRRYQQAKIIVLPALVQGEHATRSIVE 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                  +KE       D++I+ RGGGSIE+LW FN+E + RAI  S IPIISA+GHETD
Sbjct: 187 ------RIKEANEKQLCDVLIVGRGGGSIEELWAFNEEAVARAIFASDIPIISAVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ AD+RAPTPTGAAE+AVP    L   + +++ RL   +        + L +L  
Sbjct: 241 FTISDFTADMRAPTPTGAAELAVPSTTDLIERIKSIDIRLTRAVKNQTSQAKDRLLALQS 300

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +       +       + D +    +  L   I +K    +    R+K       + + +
Sbjct: 301 SYAFRFPKRLQEQKEQQFDLVFDRFQKQLTRQIEQKRSQLDRQTYRLKPLHPKEQLLQAK 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +    + + + + +   ++ I                                       
Sbjct: 361 KRHANETEQLIRSMNVQMKTI--------------------------------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                   H+        L +      ++RGY+     +   I     + TK ++ I   
Sbjct: 382 --------HSQFQSVLGKLNALNPLQVMERGYSLAYKED-ELIKSVNQVETKDQLTITMK 432

Query: 491 DGQANAIVINKA 502
           DG+    VI K 
Sbjct: 433 DGRLICEVIEKE 444


>gi|227524629|ref|ZP_03954678.1| exodeoxyribonuclease VII large subunit [Lactobacillus hilgardii
           ATCC 8290]
 gi|227088113|gb|EEI23425.1| exodeoxyribonuclease VII large subunit [Lactobacillus hilgardii
           ATCC 8290]
          Length = 452

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 163/502 (32%), Positives = 258/502 (51%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV+ L+ ++K    V+  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   N+I+F+PEEG++ LV G I+ +  S  YQI ++S+ P G G L  A E+ KK+L
Sbjct: 60  MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLFS   +  + F PK IAV+TSP+GAV+RDI+  +  R+P+ ++++FP  VQGDE 
Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVVRDIITTVRRRYPIAQIVLFPALVQGDEA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I+++N L         D +I+ RGGGSIEDLW FN+E + RAI+ S+IP+IS+
Sbjct: 179 STDIVRQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISASTIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVP  + +   L   + R+ N   +LI+     
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKTTQNRIINAEYQLIEQAKLR 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L +     +  +       +LD L + LE+  + +   +  + + +  R++     +
Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKVTASRKNNLSQLHMRLRLVAPTY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ +Q +   Q  ++Q                                          
Sbjct: 353 MIKEQKQRLNVLQLRLKQ------------------------------------------ 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +        +    L   +    L RGYT   D N++FI++  +L  K  
Sbjct: 371 -----SQLQNLNKVKQQYLMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I ++F DG  NA +      KE
Sbjct: 425 INVHFSDGVINASINKMTKGKE 446


>gi|259503555|ref|ZP_05746457.1| exodeoxyribonuclease VII [Lactobacillus antri DSM 16041]
 gi|259168468|gb|EEW52963.1| exodeoxyribonuclease VII [Lactobacillus antri DSM 16041]
          Length = 449

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 144/500 (28%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VS+L+ +LK   + +  L  V + GE+S +R    SGH YFSLKD+H+ IDA+++
Sbjct: 4   SKYLTVSQLTKYLKLKFDRDPYLQTVYLTGELSNFRLR--SGHQYFSLKDDHAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G  +K++F PEEG++  V G +  +  S +YQI I+++ P G G+L  A E+ KKKL  
Sbjct: 62  RGQFSKVKFTPEEGMKLCVTGHVGLYERSGRYQIYIDTMEPDGIGSLYLAFEQLKKKLSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLFS   K P+P  P+ IAV+TS  GAVIRDI   +  R+P+ +V++FP  VQG++   
Sbjct: 122 EGLFSRPKK-PVPLFPRRIAVVTSLNGAVIRDINTTVRRRYPIAQVVLFPTVVQGEKAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I +             D +I+ RGGGSIEDLW FN+E++ RAIA+  +P+IS++G
Sbjct: 181 DIARQIKR------AGERGDFDTLIIGRGGGSIEDLWPFNEEVVARAIADCPLPVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVP---VKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           HETD T+AD  AD RA TPT AAE+A P       +                     K  
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPQRLDNTLMLIGDFQRRLYNTLRAQIDFDRKQL 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
              +         +       ++D+L ++L    +  +         + NR+ +      
Sbjct: 295 AKLTGSYIFQQPTRLYENYAQKVDQLTQQLRQQQDNRLTSAANDVAQLENRLLAYNPQRL 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +++  + +    ++  V+  ++ +  + +                             
Sbjct: 355 VDQDQLTVQQLTARLQTAVQARVQQVSQQLQ----------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               T+ L S      ++RGYT +   +   + Q   LA    +
Sbjct: 386 ------------------ALTKQLHSLDPLKIMERGYTYVT-KDGKVVNQAAQLAPGEPL 426

Query: 486 LINFFDGQANAIVINKAPPK 505
           L++F DG+    +      K
Sbjct: 427 LLHFADGEVTVTITKIKEKK 446


>gi|157804055|ref|YP_001492604.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
 gi|166232363|sp|A8EZN6|EX7L_RICCK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157785318|gb|ABV73819.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
          Length = 444

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 261/489 (53%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ ++GEISG++ I SSGHAYF+LK+N + +    
Sbjct: 8   NQATKEFSVSEISNKIKELLENNFGYIKIKGEISGFK-IASSGHAYFNLKENTAILACTC 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+ TL KI+F  ++G+E ++ GK++++ G+S+YQ+ +++L P+G GT+L  L +RK +L 
Sbjct: 67  WRPTLAKIKFPLKDGMEVVISGKLSSYAGNSRYQLAVDNLQPAGLGTMLQILNERKTRLE 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+   + PIPF+P  I VITS TGAVI+DI+ RI  RFP  +II+PV VQG+    
Sbjct: 127 KEGLFNK-RRIPIPFLPTRIGVITSITGAVIKDIIHRIRERFPTHIIIWPVSVQGENSGN 185

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+G
Sbjct: 186 EIAAAIEGFNKLEEA---NKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   +LI Y    + 
Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKVLLNNTKQLINYHEQNIA 302

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        ++  +  LD            ++            ++K          
Sbjct: 303 NYDKIHRYLTNYINHRQQLLDETGF-------NLLDVLPCFIELQETKLKFCS------- 348

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                                R      I Y    +      + 
Sbjct: 349 -----------------------------------KERINPAKIINYKTLELTHQTAYLS 373

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I 
Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGAMGNFLSSKITAADEKIFNIK 433

Query: 489 FFDGQANAI 497
           F DG+   +
Sbjct: 434 FSDGEIKVV 442


>gi|148244837|ref|YP_001219531.1| exodeoxyribonuclease VII large subunit [Candidatus Vesicomyosocius
           okutanii HA]
 gi|166232370|sp|A5CW49|EX7L_VESOH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|146326664|dbj|BAF61807.1| exodeoxyribonuclease VII large subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 466

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 145/490 (29%), Positives = 231/490 (47%), Gaps = 33/490 (6%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y++S         +E+N+    ++GEIS      +SGH YFSLKDN  ++   +++   
Sbjct: 7   VYTISSFLSVCNKTIENNIPTCWLQGEISNLT-RPASGHWYFSLKDNTVQVRCALFRFNQ 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             I+F P+ GIE LV    T +     +Q++I+ +   G G L  A ++ KK L  EGLF
Sbjct: 66  RYIKFSPKNGIEVLVRVVPTLYEARGNFQLVIQQIEQIGIGNLNLAFKQLKKDLDNEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + HK P+P     I VI+S TGAVI+DI++ ++ R+P  ++++F   VQG +  K++  
Sbjct: 126 DNIHKKPLPNTINTIGVISSSTGAVIQDIIKVLNNRYPFVKILLFDSIVQGQDSIKKL-- 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                N L       + D+II+ARGGGS+EDLW FN+E++ RAI N+  PIISAIGHETD
Sbjct: 184 ----TNALNIADQSGKCDVIIIARGGGSLEDLWAFNEEILARAIFNAKTPIISAIGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  +D+RAPTP+ AA +    +  L S+   L  +L+    + + Y  + LN L  
Sbjct: 240 TTIADLVSDIRAPTPSFAAMLVTSNRLELLSNTNKLYTQLHQSYRQTLHYYQSRLNQLKL 299

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + N ++ +     +LD L   L    E I        N +   +K    I  I+  +  
Sbjct: 300 KISNPNKQIDYLNQKLDYLSINLTTRKESIFTLNNAKLNSLFTTLKQHSPIKTIKHAK-- 357

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                        L+ L+ Q K  I   +  +     R++ I+ 
Sbjct: 358 -----------------------SLNQMSLNQLKYQIKQIINTNNNMLYLATERLQKIIM 394

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    +SI    L   +  N L RG++   DT N  ++   N+     I+    +G
Sbjct: 395 ALTNKHKARLSIQANSLHYLSPLNILARGFSITSDTKNQVLSSVTNIKINQTIITQLDNG 454

Query: 493 QANAIVINKA 502
              + +    
Sbjct: 455 ALYSNIEKIE 464


>gi|227510478|ref|ZP_03940527.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190130|gb|EEI70197.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 452

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 167/502 (33%), Positives = 259/502 (51%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV+ L+ ++K    V+  L  V + GEIS +R      H YFSLKD+H++I AI
Sbjct: 1   MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPMR-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   N+I+F+PEEG++ LV G I+ +  S  YQI ++S+ P G G L  A E+ KKKL
Sbjct: 60  MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLFS   +  + F PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQGDE 
Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVIRDIITTVRRRYPIAQIVLFPALVQGDEA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I+++N L         D +I+ RGGGSIEDLW FN+E + RAI++S+IP+IS+
Sbjct: 179 STDIVKQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISSSTIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVP  + +   L   + R+ N   +LI+     
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKATQNRIINAEYQLIEQAKLR 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L +     +  +       +LD L + LE+  + I   +  + + +  R++     +
Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKITTSRKNNLSQLHMRLRLVAPTY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ +Q +   Q  ++Q   Q+                                     
Sbjct: 353 MIKEQKQRLNVLQLRLKQNQLQN------------------------------------- 375

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +        +    L   +    L RGYT   D N++FI++  +L  K  
Sbjct: 376 ----------LNKVKQQYQMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I ++F DG  NA +      KE
Sbjct: 425 INVHFSDGVINASINKMTKGKE 446


>gi|332686258|ref|YP_004456032.1| exodeoxyribonuclease VII large subunit [Melissococcus plutonius
           ATCC 35311]
 gi|332370267|dbj|BAK21223.1| exodeoxyribonuclease VII large subunit [Melissococcus plutonius
           ATCC 35311]
          Length = 448

 Score =  337 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 150/503 (29%), Positives = 248/503 (49%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  + + GEIS +R   ++ H YFSLKD+ ++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRIYLTGEISNFRLRVNA-HQYFSLKDDGAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ LV+G+I+ +  +  YQI I+ + P G G L  AL + K+KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVLVVGRISLYENNGAYQIYIDHMEPDGIGALYQALAELKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF+   +  +P  PK IAVITSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 AKEGLFNKVKRK-LPLYPKRIAVITSPSGAVIRDIITTVHRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D IIL RGGGSIEDLW FN+E + RAI  S IPIIS+
Sbjct: 179 ADDIVRNIER------AEKIGNFDTIILGRGGGSIEDLWPFNEESVARAIYQSKIPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAEMAVPV       +   + RL    + L++ +   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAEMAVPVLSEELLKIKERQERLAQAFLYLVQQQEEH 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LD++ + L+   E I  +K      I+N++     ++
Sbjct: 293 FKHLKNSYVFKQPERLYEGQTLKLDQVTQRLQQLAEAIYHQKQLQTQSILNQLYQQAPLN 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++ +Q+     +++    +Q                                      
Sbjct: 353 QIKEKKQYTSFLNKNLTTATQQ-------------------------------------- 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K          + L   +    + RGY+     N   I   + +    +
Sbjct: 375 ---------IVKDKRKQFISLVQQLDLLSPLKIMGRGYSYTT-KNEKVIRSAQEVKVADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A+V +K   +++
Sbjct: 425 LTIHYTDGMVKAVVESKTSLEKE 447


>gi|295677491|ref|YP_003606015.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1002]
 gi|295437334|gb|ADG16504.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1002]
          Length = 459

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 137/509 (26%), Positives = 235/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MNP +   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNPENPFASAATPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF+P EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFMPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRALPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +      +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGAGVSAKLAAMVETAGARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 234 IAESVIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVMLLRELDHRHATLARA 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLRVRLASAGARPVRDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++   R  +    Q +   + +                             
Sbjct: 354 RWQRWRP--DLAGERTRVDTLAQRLNAALSRQHERQV----------------------- 388

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFIT 474
                                     + + +  L+  + + TL+RGY ++ D  +   I 
Sbjct: 389 ------------------------ARICMLSARLEVLSPQRTLERGYAAVLDTQSGRAIR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +   
Sbjct: 425 TPSSLKPGRRLTMHLAEGSADVALADVQA 453


>gi|293606238|ref|ZP_06688601.1| exodeoxyribonuclease VII [Achromobacter piechaudii ATCC 43553]
 gi|292815385|gb|EFF74503.1| exodeoxyribonuclease VII [Achromobacter piechaudii ATCC 43553]
          Length = 455

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 114/484 (23%), Positives = 213/484 (44%), Gaps = 57/484 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            N+      +V++L+  +  ++E ++  + VRGEIS +    +SGH YF+LKD+ + + A
Sbjct: 9   NNAFTRDILTVAQLNQAVGQLLERSIPALWVRGEISNFT-QAASGHWYFTLKDSRASVRA 67

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++   + + F+P+ G +  +  +++ +     YQ+  +++  +G G L  A  + K++
Sbjct: 68  VMFRSRASAVGFVPKAGDQVEIRARVSLYEPRGDYQLQADAMRRAGLGNLYEAFLRLKEQ 127

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF    K     +P+ I VITS   A +RD+L  ++ R P + +II+P  VQG +
Sbjct: 128 LASEGLFDPARKREPVRLPRAIGVITSLHAAALRDVLSALARRAPQVPIIIYPAPVQGAD 187

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               +A  +   N   E       D ++L RGGGSIEDLW FNDE + R +A S IP+IS
Sbjct: 188 AASRLAAQVRLANARAE------VDTLLLVRGGGSIEDLWSFNDEDLARQVAASEIPVIS 241

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHETD+T+ D+ AD+RAPTPT AAE+A   +  L                        
Sbjct: 242 GVGHETDFTIVDFVADVRAPTPTAAAELACVPRSELMG---------------------- 279

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                                R+ +  + +    +  + R  +  +    ++        
Sbjct: 280 ---------------------RVMQSAQAMVRGQQRRLERAAQRLDRASAQLV--SPSQR 316

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           ++  ++ +   +  +              +  ++ +L                 +     
Sbjct: 317 LEHQQERLNSLRFRLASAWSGPQGR----RSARVNLLTQRLAHRVPDTGRAADRLAGAAR 372

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++    +  +      ++  T  L++    NTL RGY   +D +   +     LA    +
Sbjct: 373 QLGQAHARLLVQGRNRLAAATAQLRALDPGNTLSRGYAIARDADGRIVRDAATLAAGQAL 432

Query: 486 LINF 489
            ++F
Sbjct: 433 DLSF 436


>gi|33593722|ref|NP_881366.1| exodeoxyribonuclease VII large subunit [Bordetella pertussis Tohama
           I]
 gi|81836223|sp|Q7VVB6|EX7L_BORPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|33563795|emb|CAE43037.1| exodeoxyribonuclease large subunit [Bordetella pertussis Tohama I]
 gi|332383125|gb|AEE67972.1| exodeoxyribonuclease VII large subunit [Bordetella pertussis CS]
          Length = 463

 Score =  336 bits (862), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 131/503 (26%), Positives = 218/503 (43%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V++L+  +  ++E ++  + VRGEIS +    +SGH YF+LKD+ + +  ++++   
Sbjct: 16  ILTVAQLNQAVGQLLERSIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRTVMFRSRA 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F+P  G +  V  +++ +     YQ+  + +  +G G L  A  + K +L +EGLF
Sbjct: 75  AQVGFVPRPGDQVEVRARVSLYEPRGDYQLQADGMRRAGVGNLYEAFLRLKAQLQDEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             Q K     +P+ I V+TS   A +RD+L  ++ R P + VII+P  VQG +    +A 
Sbjct: 135 DPQRKRQPARLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAARLAA 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + Q N   E       D ++L RGGGSIEDLW FNDE + R +A S IP+IS +GHETD
Sbjct: 195 RVAQANQRAE------VDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVISGVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ ADLRAPTPT AAE+A   +  L ++L +    L     R +      L+    
Sbjct: 249 FTIVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAEWLARAQQRRLDQAAQRLDRAAA 308

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  Q L+  + RL+ L   L          +    + +  R+               
Sbjct: 309 MLTSPAQRLAHQQERLNTLRHRLASAWRGPQGHRVARLDMLAQRLAHRRP---------- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                             L+ ++    +
Sbjct: 359 ---------------------------------------DTGRAAERSAALLAQLGRAQA 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
               +    +      L++   ++TL RGY  ++D     +T    LA + RI I    G
Sbjct: 380 RLAAARQARLDTLAAQLRALDPQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARG 439

Query: 493 QANAIVINKAPPKEQPTKKCQLH 515
           +  A V +   P           
Sbjct: 440 RIGADVTDIGTPDGTDGNPALRR 462


>gi|229587029|ref|YP_002845530.1| exodeoxyribonuclease VII large subunit [Rickettsia africae ESF-5]
 gi|259646299|sp|C3PPC7|EX7L_RICAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|228022079|gb|ACP53787.1| Exodeoxyribonuclease VII, large subunit [Rickettsia africae ESF-5]
          Length = 444

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 179/487 (36%), Positives = 258/487 (52%), Gaps = 54/487 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+
Sbjct: 10  TTKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWR 68

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L +E
Sbjct: 69  PILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKE 128

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EI
Sbjct: 129 GLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEI 187

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE
Sbjct: 188 AEAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHE 244

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+TL D AAD RAPTPT AAE AVPV   L ++L + E  L N   RLIKY    + + 
Sbjct: 245 VDYTLIDLAADKRAPTPTAAAEFAVPVHSILNNTLQSYEKILLNNTSRLIKYHEQNIVNY 304

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K        ++  +  LD     L   L   I                           
Sbjct: 305 NKIHRYLSHYINHRQQLLDETGFNLLDALPCFIEL------------------------- 339

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
                                   ++ KI      R      I Y    +      +   
Sbjct: 340 ------------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKS 375

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
            ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F 
Sbjct: 376 ANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFS 435

Query: 491 DGQANAI 497
           DG+   +
Sbjct: 436 DGEIKVV 442


>gi|323527165|ref|YP_004229318.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. CCGE1001]
 gi|323384167|gb|ADX56258.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1001]
          Length = 459

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 140/509 (27%), Positives = 237/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MN  S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNSDSPFTSSTMPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF P+EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFTPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K   P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRAPPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           I+P  VQG     ++A  +   +  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 IYPAPVQGAGVSAKLAAMVDAASARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L +  A L   
Sbjct: 234 IAASAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHAALARG 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L       +      F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSARLASAGARPVRDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++  ++  +    Q ++  + +                             
Sbjct: 354 RWQRWRP--DLAAHQARLGSLAQRLDAALLRQHERQAA---------------------- 389

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + + TL+RGY ++ D      + 
Sbjct: 390 ---RIATLSAR----------------------LEVLSPQRTLERGYAAVLDAQTGRAVR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +  P
Sbjct: 425 APSSLKPGRRLTMHLAEGTADVALADVQP 453


>gi|227499082|ref|ZP_03929219.1| exodeoxyribonuclease VII large subunit [Acidaminococcus sp. D21]
 gi|226904531|gb|EEH90449.1| exodeoxyribonuclease VII large subunit [Acidaminococcus sp. D21]
          Length = 447

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 148/495 (29%), Positives = 243/495 (49%), Gaps = 59/495 (11%)

Query: 13  PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             ++VSE++  LK ++  +   +++ ++GE+S +R  ++SGH YF+LKD+   I  +++K
Sbjct: 5   KVFTVSEVNLSLKELIHKDPTFANLQIQGEVSNFR-RYASGHCYFNLKDSKGLIKCVMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G   +++ LP +G + + IG+I  +     YQ  ++ L+P G+G L+ A E  K+KL  E
Sbjct: 64  GAAQRLKKLPRDGDQVVGIGRIDVYERDGVYQFYVDMLMPVGTGDLMAAYEALKQKLSAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189
           GLF +  K PIP  P+I+ V+TS  GA IRDI++    R   +++ ++PVKVQG E P E
Sbjct: 124 GLFDETRKQPIPVSPRIVGVVTSADGAAIRDIIKVAGRRDSSVKIRLYPVKVQGKEAPPE 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA  I  +N           D++I+ RGGGS+EDLW FNDE +VRAIA S IPIISA+GH
Sbjct: 184 IAAGIHFMNR------HNLCDVLIVGRGGGSMEDLWAFNDEKVVRAIAASRIPIISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+TL+D+AAD RA TP+ AAE AVP +    +S   L  RL   +   +  +   L+ 
Sbjct: 238 EIDFTLSDFAADKRAATPSQAAEFAVPDRSKDIASYEKLNLRLKKAVADRLAMERQCLDG 297

Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           +L+       ++       RLD+L + L  +    + R+      + +          + 
Sbjct: 298 VLQRPVFRYPERLTEGQSQRLDQLGQSLSTSFSRRLERETMRLMKLRDHWFFRHPEVFVA 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +++ H+      + + +  H RY   E ++++  + +  +                    
Sbjct: 358 RHQDHLT----RLTKDLDLHFRYTLSETQQRLKEVSVKFQ-------------------- 393

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                      +  L+RGYT  +      ++    L     I  
Sbjct: 394 -----------------------LLDPQKVLERGYTMTEGPGGKILSSMGTLKEGDTIKT 430

Query: 488 NFFDGQANAIVINKA 502
            F DG   +IV  K 
Sbjct: 431 YFKDGVLRSIVSKKE 445


>gi|116492585|ref|YP_804320.1| exodeoxyribonuclease VII large subunit [Pediococcus pentosaceus
           ATCC 25745]
 gi|122265951|sp|Q03FZ4|EX7L_PEDPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116102735|gb|ABJ67878.1| Exodeoxyribonuclease VII large subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 447

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 153/501 (30%), Positives = 248/501 (49%), Gaps = 61/501 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    +VS L+ ++K   +++  L  V + GEIS +R   +S H YFSLKD +++I AI+
Sbjct: 3   EDKYLTVSALTNYIKRKFDADPYLHRVYLVGEISNFRLRTNS-HQYFSLKDENAKISAIM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K    K++F PEEG+  +V G+I+ +PG+  YQI ++S+ P G G L  A E+ K KL 
Sbjct: 62  FKSAFAKVKFQPEEGMRVIVSGRISLYPGNGSYQIYVDSMQPDGVGALYQAYEQLKIKLS 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF      PIP  P+ IA++TSP+GAVIRDI+  +S R+P +++++FP  VQG+E  
Sbjct: 122 QEGLFEAPK-LPIPKYPRKIAIVTSPSGAVIRDIITTVSRRYPIVQLVLFPALVQGNEAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             IA  I  +NTL         D II+ RGGGSIEDLW FN+E++ RAI  S +P+IS++
Sbjct: 181 NSIAAQIKMINTL------DDFDTIIIGRGGGSIEDLWPFNEEVVARAIFASKLPVISSV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD  AD+RA TPT AAE+A PV   +   L  L+ +       ++K +   +
Sbjct: 235 GHETDTTIADLVADMRAATPTAAAELATPVLTDILEELQKLQLQTIVAFRNILKMRSQQV 294

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L +        +        +D L  +L    +  I      F  + +R+ ++     
Sbjct: 295 QHLQQSYIFQEPQRLYEGYVQNVDILTEKLISLEKQQITTAEGSFKTLNSRLLANTPASR 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I+  +Q++   +Q                                               
Sbjct: 355 IKMAKQNVEHLRQMTNN------------------------------------------- 371

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                ++++       ++     L + +    + RGYT +   +   +    +L+   +I
Sbjct: 372 ----NITNRFSKYANDLNSLIGSLDTLSPLKIMSRGYTYVTR-DTKVVKSIEDLSIDDKI 426

Query: 486 LINFFDGQANAIVINKAPPKE 506
            +NF DG ANA++       +
Sbjct: 427 QLNFSDGSANAVIKTINSEDK 447


>gi|254496307|ref|ZP_05109193.1| exonuclease VII, large subunit [Legionella drancourtii LLAP12]
 gi|254354468|gb|EET13117.1| exonuclease VII, large subunit [Legionella drancourtii LLAP12]
          Length = 445

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 143/498 (28%), Positives = 230/498 (46%), Gaps = 57/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                 +VS+L+  +K  +E+ L  V V GEIS      +SGH YF+LKD+ ++I  + +
Sbjct: 3   TQASILTVSQLNRQVKSYLENELGTVHVEGEISNL-SKPASGHFYFTLKDSGAQIRCVFF 61

Query: 70  KGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           K      I     +G   +  GK++ +     YQ+IIE +  +G G L    E+ K KL 
Sbjct: 62  KNRHFGAIAAKLGDGQHIIASGKLSLYEARGDYQLIIEQVTEAGLGALYQRFEELKNKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLF   +K P+P +P+II VITS TGA IRDIL  ++ RFPL +V+I+P +VQG    
Sbjct: 122 AEGLFQPSNKKPLPTMPQIIGVITSTTGAAIRDILSTLARRFPLAQVLIYPSEVQGAGAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            ++  A+ + N         R D++ILARGGGSIEDLW FN+E + R IA+S IPI+S +
Sbjct: 182 PQLIKALQRANK------DKRCDVLILARGGGSIEDLWAFNEEQLARQIADSLIPIVSGV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ AD RA TPT AA    P    L   L +   RL+  + R+++     L
Sbjct: 236 GHETDFTIADFVADYRAETPTAAATAVTPNSLELLKLLNHSIVRLHEAMHRIVQRNQIRL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L   + +  + ++      D L R+L   +   + RK    +   +++ +      I+
Sbjct: 296 QHLKDKISSPQKAIASYWQTTDYLERQLLSCMMHALQRKKHQLHLCTHQLNAQNPTTQIK 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +                                 +L++ T   I  ++  + +L  ++
Sbjct: 356 QAQ--------------------------------ILLQQITTQLIQNIYNKVNQLSYQL 383

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           +                    L + +   TL RGY      +   +   +++     I +
Sbjct: 384 K---------------GLLSTLHAVSPLATLDRGYAIATQKD-KVLFSSKHVQIGDLIDV 427

Query: 488 NFFDGQANAIVINKAPPK 505
               G+    V       
Sbjct: 428 RLAQGKLTCEVTQTQSTS 445


>gi|254281708|ref|ZP_04956676.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           NOR51-B]
 gi|219677911|gb|EED34260.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium
           NOR51-B]
          Length = 449

 Score =  335 bits (860), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 50/485 (10%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           ++VSEL+  +K +++ + + V V GEIS +    SSGH YFSLKD+ S++   +++    
Sbjct: 7   FTVSELNGDVKTLLQDHYATVLVEGEISNFVA-ASSGHWYFSLKDDRSQVRCAMFRRANL 65

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++   PE G +  +   ++ +    ++Q+I E++  +G G L  A E+ KK+L +EGLF 
Sbjct: 66  RVRPRPENGDQVTIRAAVSLYEARGEFQLICETMDAAGDGALQLAFERLKKRLADEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIANA 193
            + K  +P     + V+TSPTGA I DI   +  R P+  V + PV VQG+     I+ A
Sbjct: 126 PELKKAVPGDCATVGVVTSPTGAAIHDIQSVLERRSPMTAVYLLPVAVQGNGAAAAISAA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I Q N L         D +I+ RGGGS+EDLW FN+E + RAIA S+IP++SA+GHE D+
Sbjct: 186 IDQANRLVTAGQ-LSLDALIVGRGGGSLEDLWSFNEESVARAIAASAIPVVSAVGHEIDF 244

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           ++AD+AAD+RA TP+ AAE+    +      L  + A+LN  ++         L  L   
Sbjct: 245 SIADFAADIRAATPSAAAELVTTDQRERMQQLDAITAQLNRFMVGRTSQYREKLGHLRAR 304

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +    +     RL  L   L   ++  +  K  H   +  R+  +   +  Q +R+ +
Sbjct: 305 LRHPSSQVRQQEARLTDLKTRLRRAIDAQLVAKNDHMRSLRLRLHRESPAYRAQISRKQV 364

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           ++  Q                                         +  LI R       
Sbjct: 365 VDAGQR----------------------------------------MSLLIHRKLTSTKE 384

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           ++           R+LQS   + TL RGY  +Q  +   + ++  + +   + +    G 
Sbjct: 385 RLNQQR-------RLLQSLGPEGTLARGYAIVQTEDGAVVKRQNQVQSGQSLRVRLGSGN 437

Query: 494 ANAIV 498
            +  V
Sbjct: 438 IDVAV 442


>gi|315171917|gb|EFU15934.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX1342]
          Length = 448

 Score =  335 bits (860), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVAELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|239637667|ref|ZP_04678639.1| exodeoxyribonuclease VII, large subunit [Staphylococcus warneri
           L37603]
 gi|239596885|gb|EEQ79410.1| exodeoxyribonuclease VII, large subunit [Staphylococcus warneri
           L37603]
          Length = 445

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 149/492 (30%), Positives = 237/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LTVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLSKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F + +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +   +I 
Sbjct: 124 FDNSNKKTIPRFPKKIAVLTASTGAAIRDIHSTINSRYPLVEQIQISTLVQGQQAKADII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   + L         D II+ RGGGSIEDLW+FN+E +V+AI     PIISA+GHET
Sbjct: 184 EKIKYADQL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIFECQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA MA P +  L   +   +  L   I + ++     L  L 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVMATPDQYELLQQIKQYQFTLTRHIKQYVEQHKKHLEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L ++L   L   + ++    + +  R     L  +I +N
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLNQKLTSKLEQQQHQLSILKQRFNPKHLESSIIRN 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q   + +  + Q                                     I   +++ + 
Sbjct: 357 QQQNGQLKSRLTQ------------------------------------KINNDLSQYKN 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L  KI+            L   +  NT+ RGY  + +  +N +T  ++++    I++  
Sbjct: 381 ALKSKIEQ-----------LNQLSPTNTMLRGYAIV-NKEDNVVTSTKDMSENDEIVLTM 428

Query: 490 FDGQANAIVINK 501
            DGQ +AIV   
Sbjct: 429 KDGQIDAIVKKV 440


>gi|163856980|ref|YP_001631278.1| exodeoxyribonuclease VII large subunit [Bordetella petrii DSM
           12804]
 gi|163260708|emb|CAP43010.1| exodeoxyribonuclease large subunit [Bordetella petrii]
          Length = 435

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 124/490 (25%), Positives = 212/490 (43%), Gaps = 57/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +V++L+  +  ++E N+  + VRGEIS +    +SGH YF+LKD+ + + A++++G    
Sbjct: 2   TVAQLNQAVGQLLERNIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRAVMFRGRAAA 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F+P  G +  V  +++ +     YQ+  E++  +G G L  A  + K +L EEGLF  
Sbjct: 61  VGFVPRAGDQVEVRARVSLYEPRGDYQLQAEAMRRAGLGNLYEAFLRLKAQLAEEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K     +P+ I VITS   A +RD+L  ++ R P + V+++P  VQG +    +A  +
Sbjct: 121 AVKRTPVALPRAIGVITSLHAAALRDVLSALARRAPQVPVLVYPAPVQGADAAARLAVQL 180

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D ++L RGGGSIEDLW FNDE + R +A S+IP+IS +GHETD+T
Sbjct: 181 QVANARQE------VDTLLLVRGGGSIEDLWSFNDESLARLVAASAIPVISGVGHETDFT 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           + D+ AD+RAPTPT AAE+A   +  L   +     RL     R ++     L+     L
Sbjct: 235 IVDFVADVRAPTPTAAAELACVPRADLLGQVEQAARRLARAQQRRLELAAQRLDRAAAQL 294

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                                                              +    + + 
Sbjct: 295 ---------------------------------------------VSPARRLAHQAERLN 309

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
             +  +              +  +I +L          +      +  L  R+    + +
Sbjct: 310 TLRHRLAGAWNGPQGR----RNARIGLLAQRLAHATPDLGRASERLAALARRLGQAQARQ 365

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           +             L++   ++TL RGY  ++D     +    +LA    +   F  G A
Sbjct: 366 LAVRKARAEAVAAHLRALDPQHTLARGYAIVRDAQGRIVRDGSSLARAQELDATFAQGGA 425

Query: 495 NAIVINKAPP 504
              V++    
Sbjct: 426 RVQVLDPRSS 435


>gi|255506909|ref|ZP_05382548.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           D(s)2923]
          Length = 516

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 251/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   +++   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRSALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  + +      +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|187925169|ref|YP_001896811.1| exodeoxyribonuclease VII large subunit [Burkholderia phytofirmans
           PsJN]
 gi|187716363|gb|ACD17587.1| exodeoxyribonuclease VII, large subunit [Burkholderia phytofirmans
           PsJN]
          Length = 459

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 140/509 (27%), Positives = 235/509 (46%), Gaps = 62/509 (12%)

Query: 1   MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           MNP S   S   P       VS L+  +  ++E +   V V GE+S +    +SGH YFS
Sbjct: 1   MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +KD  +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L
Sbjct: 60  IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  +S R P + VI
Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRALPSHPRSIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           ++P  VQG     ++A  +   N  +E       D++I+ RGGGSIEDLW FN+E++ RA
Sbjct: 180 VYPAPVQGVGVSSKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L    A L   
Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDQRHATLARG 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R+++ +   L+ L + L +  + L+  R  L +L   L              F+ +  
Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASAGARPARDARARFSLLQM 353

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R +      ++  ++  +    Q ++  + +                             
Sbjct: 354 RWQRWRP--DLAGHQVKLGNLSQRLDAALLRQH-------------------------ER 386

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
               I  L  R                      L+  + + TL+RGY ++ D      + 
Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503
              +L    R+ ++  +G A+  + +   
Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQA 453


>gi|76789053|ref|YP_328139.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           A/HAR-13]
 gi|237802752|ref|YP_002887946.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237804674|ref|YP_002888828.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|255348691|ref|ZP_05380698.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 70]
 gi|255503231|ref|ZP_05381621.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 70s]
 gi|123772407|sp|Q3KM31|EX7L_CHLTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|76167583|gb|AAX50591.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           A/HAR-13]
 gi|231272974|emb|CAX09886.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231273986|emb|CAX10779.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           B/Jali20/OT]
 gi|296435846|gb|ADH18020.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           G/9768]
 gi|296437706|gb|ADH19867.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           G/11074]
 gi|297140205|gb|ADH96963.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           G/9301]
          Length = 516

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 251/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   +++   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  + +      +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|308274745|emb|CBX31344.1| Exodeoxyribonuclease 7 large subunit [uncultured Desulfobacterium
           sp.]
          Length = 447

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 155/494 (31%), Positives = 239/494 (48%), Gaps = 56/494 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           ++   YSV+EL+  LK+++E     V V G+IS       SGH YF+LKD  +RI+AII+
Sbjct: 1   MEIKIYSVTELTSELKNLIEEKYPLVWVFGQISNLST-PFSGHFYFTLKDESARINAIIF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG    ++F PE G+  +  G++  +     YQ+I E L P G G+L  A E+ K KL  
Sbjct: 60  KGQRKNLKFTPENGMSVIGFGRLGLYETKGSYQVIFEYLEPKGIGSLQIAYEQLKAKLSS 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF  ++K  +PF+P+ I +ITSPTG+V+ DI+  IS R+P + + I PV VQG     
Sbjct: 120 EGLFDSKYKKKLPFLPENICIITSPTGSVLYDIINIISRRYPSVNLKIIPVSVQGIFSEN 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI +AI  LN           D+ I+ARGGGS+E+L  FN E + RAI  S IPIISAIG
Sbjct: 180 EIVSAIKLLNKYCCS------DVAIIARGGGSLEELHAFNSESVARAIFESKIPIISAIG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T++D+ +D RAPTP+ AAE+ VP+K  L      L   L + + +++    N LN
Sbjct: 234 HETDYTISDFVSDYRAPTPSAAAEIVVPLKNDLLIKNQKLYLSLKSGMEKILNNHRNNLN 293

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + K + +    L     + D L + L  +    I +        I+++ ++  +     
Sbjct: 294 KISKRIKDPKSKLYDLILKNDDLTKRLVRSEINYINQLKERTVWKIDKLNNNNPLR---- 349

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                                       I   +  +K ++T + 
Sbjct: 350 -------------------------------------------YILIYNDKVKIIVTNLY 366

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487
             ++ K+ +    ++  +  L     K  LKRGY+  +       IT   N+    +I +
Sbjct: 367 KSINIKLNNSKNKLNEFSAKLSVLNPKGILKRGYSIARTIPGKNIITDSNNVEIAQQIEV 426

Query: 488 NFFDGQANAIVINK 501
              +G     V  K
Sbjct: 427 IVNEGSLICRVERK 440


>gi|33597151|ref|NP_884794.1| exodeoxyribonuclease VII large subunit [Bordetella parapertussis
           12822]
 gi|33600996|ref|NP_888556.1| exodeoxyribonuclease VII large subunit [Bordetella bronchiseptica
           RB50]
 gi|81836603|sp|Q7W7F4|EX7L_BORPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81837027|sp|Q7WKU2|EX7L_BORBR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|33566602|emb|CAE37860.1| exodeoxyribonuclease large subunit [Bordetella parapertussis]
 gi|33575431|emb|CAE32508.1| exodeoxyribonuclease large subunit [Bordetella bronchiseptica RB50]
          Length = 463

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 133/503 (26%), Positives = 220/503 (43%), Gaps = 57/503 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V++L+  +  ++E ++  + VRGEIS +    +SGH YF+LKD+ + +  ++++   
Sbjct: 16  ILTVAQLNQAVGQLLERSIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRTVMFRSRA 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F+P  G +  V  +++ +     YQ+  + +  +G G L  A  + K +L +EGLF
Sbjct: 75  AQVGFVPRPGDQVEVRARVSLYEPRGDYQLQADGMRRAGVGNLYEAFLRLKAQLQDEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             Q K     +P+ I V+TS   A +RD+L  ++ R P + VII+P  VQG +    +A 
Sbjct: 135 DPQRKRQPARLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAARLAA 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + Q N   E       D ++L RGGGSIEDLW FNDE + R +A S IP+IS +GHETD
Sbjct: 195 RVAQANQRAE------VDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVISGVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ ADLRAPTPT AAE+A   +  L ++L +   RL     R +      L+    
Sbjct: 249 FTIVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAERLARAQQRRLDQAAQRLDRAAA 308

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  Q L+  + RL+ L   L         R+    + +  R+               
Sbjct: 309 MLTSPAQRLAHQQERLNTLRHRLASAWRGPQGRRVARLDMLAQRLAHRRP---------- 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                                             L+ ++    +
Sbjct: 359 ---------------------------------------DTGRAAERSAALLAQLGRAQA 379

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
               +    +      L++   ++TL RGY  ++D     +T    LA + RI I    G
Sbjct: 380 RLAAARQARLDTLAAQLRALDPQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARG 439

Query: 493 QANAIVINKAPPKEQPTKKCQLH 515
           +  A V +   P           
Sbjct: 440 RIGADVTDIGTPDGTDGNPALRR 462


>gi|157964823|ref|YP_001499647.1| exodeoxyribonuclease VII large subunit [Rickettsia massiliae MTU5]
 gi|157844599|gb|ABV85100.1| Exodeoxyribonuclease VII, large subunit [Rickettsia massiliae MTU5]
          Length = 458

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 179/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    W+ 
Sbjct: 25  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTCWRP 83

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L +EG
Sbjct: 84  ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 143

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 144 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 202

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   + L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 203 EAIEGFHNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 259

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 260 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYD 319

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 320 KIHRYLSHYINNRQQLLDETGFNLLDALPYFIEL-------------------------- 353

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  +  KI      R      I Y    +      +    
Sbjct: 354 -----------------------QDTKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 390

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 391 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 450

Query: 492 GQANAI 497
           G+   +
Sbjct: 451 GEIKVV 456


>gi|118595125|ref|ZP_01552472.1| xseA; exodeoxyribonuclease vII large subunit protein
           [Methylophilales bacterium HTCC2181]
 gi|118440903|gb|EAV47530.1| xseA; exodeoxyribonuclease vII large subunit protein
           [Methylophilales bacterium HTCC2181]
          Length = 452

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 57/495 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  +SVSEL+  +K+I+ +  S V ++GE+SG+    SSGH YF LKDN +++D +++  
Sbjct: 14  NKIFSVSELNRLVKNILNTTFSLVWIKGEVSGFSSY-SSGHWYFKLKDNTAQVDCVMFAR 72

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++++ P+ G    +  +++ +  + KYQ+IIE++  +G G L       K KL + G
Sbjct: 73  KNQQLQWQPKNGDFLELQCQVSLYEANGKYQLIIETMQKAGLGELFEKYIDLKNKLEQAG 132

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
           LF++  K  +P  P++I VITS  GA +RD+L  +  R   + +II+P  VQG      I
Sbjct: 133 LFNEATKKLLPRFPRVIGVITSSDGAALRDVLSTLLRRNRSVSIIIYPTLVQGAAATSGI 192

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            NAI + N   E       D +I+ RGGGSIEDLW FN E +  AI NS +P+ISA+GHE
Sbjct: 193 CNAITKANERNE------VDALIICRGGGSIEDLWSFNTESVAYAIFNSILPVISAVGHE 246

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ AD RAPTPT AAE+       + S++      +  +  R I+     LN L
Sbjct: 247 TDFTIADFVADTRAPTPTAAAEIISEGSNQILSTIDVYLNSMTKMFERKIEQSQLKLNFL 306

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + L +  Q ++  +  L    + +  N+   +          I ++        IQ+ +
Sbjct: 307 ERRLISPIQRIAGQKDLLKSYEKRMLLNINAKLESYRNKITRTIIQLPP--PKQLIQEKK 364

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I   ++ +E                           T+++I    + I  +   +   
Sbjct: 365 EQIDTLRRRLE-------------------------INTRSQITSYSSKILSIKKNLLM- 398

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                                   K+ LKRGY+ +QD +   +   +N++    I+I F 
Sbjct: 399 ---------------------LNPKSILKRGYSIVQDVDEKILRDTKNISVDDNIVITFH 437

Query: 491 DGQANAIVINKAPPK 505
           +G A A++  K   K
Sbjct: 438 NGYAKAMITEKNSKK 452


>gi|255974046|ref|ZP_05424632.1| exonuclease VII [Enterococcus faecalis T2]
 gi|307278971|ref|ZP_07560030.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0860]
 gi|255966918|gb|EET97540.1| exonuclease VII [Enterococcus faecalis T2]
 gi|306504358|gb|EFM73569.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0860]
          Length = 448

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHKKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|312900450|ref|ZP_07759757.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0470]
 gi|311292426|gb|EFQ70982.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0470]
          Length = 448

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 146/503 (29%), Positives = 245/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHATTTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+ I   +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYITKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|239947021|ref|ZP_04698774.1| exodeoxyribonuclease VII, large subunit [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239921297|gb|EER21321.1| exodeoxyribonuclease VII, large subunit [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 487

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 176/489 (35%), Positives = 257/489 (52%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    
Sbjct: 51  NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 109

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+  L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L 
Sbjct: 110 WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLRPAGLGAMLQILNERKARLE 169

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+ +   PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    
Sbjct: 170 KEGLFNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 228

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VR   NS IPIISA+G
Sbjct: 229 EIARAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRTAYNSKIPIISAVG 285

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + 
Sbjct: 286 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIV 345

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        ++  +  LD     L   L   I  +                      
Sbjct: 346 NYDKIYRYLSHYINNRQQLLDETGFNLLDALPCFIELQGTKLKSFSK------------- 392

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                                R      + Y    +      + 
Sbjct: 393 ------------------------------------ERVNPAKILNYKTLELTHQTAYLS 416

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I 
Sbjct: 417 KSANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 476

Query: 489 FFDGQANAI 497
           F DG+   +
Sbjct: 477 FSDGEIKVV 485


>gi|227517902|ref|ZP_03947951.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis
           TX0104]
 gi|229546826|ref|ZP_04435551.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis
           TX1322]
 gi|229548920|ref|ZP_04437645.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis ATCC
           29200]
 gi|255971433|ref|ZP_05422019.1| exonuclease VII [Enterococcus faecalis T1]
 gi|256617902|ref|ZP_05474748.1| exonuclease VII [Enterococcus faecalis ATCC 4200]
 gi|256761735|ref|ZP_05502315.1| exonuclease VII [Enterococcus faecalis T3]
 gi|256852632|ref|ZP_05558003.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T8]
 gi|256957071|ref|ZP_05561242.1| exonuclease VII [Enterococcus faecalis DS5]
 gi|256962596|ref|ZP_05566767.1| exonuclease VII [Enterococcus faecalis HIP11704]
 gi|257077867|ref|ZP_05572228.1| exonuclease VII [Enterococcus faecalis JH1]
 gi|257083888|ref|ZP_05578249.1| exonuclease VII [Enterococcus faecalis Fly1]
 gi|257089388|ref|ZP_05583749.1| exonuclease VII large subunit [Enterococcus faecalis CH188]
 gi|257415597|ref|ZP_05592591.1| exonuclease VII [Enterococcus faecalis AR01/DG]
 gi|257418570|ref|ZP_05595564.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T11]
 gi|257421228|ref|ZP_05598218.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis X98]
 gi|294780569|ref|ZP_06745932.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           PC1.1]
 gi|300859769|ref|ZP_07105857.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TUSoD Ef11]
 gi|307268060|ref|ZP_07549448.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX4248]
 gi|307271990|ref|ZP_07553257.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0855]
 gi|307289418|ref|ZP_07569372.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0109]
 gi|312904542|ref|ZP_07763700.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0635]
 gi|312952748|ref|ZP_07771610.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0102]
 gi|227074656|gb|EEI12619.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis
           TX0104]
 gi|229305941|gb|EEN71937.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis ATCC
           29200]
 gi|229307991|gb|EEN73978.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis
           TX1322]
 gi|255962451|gb|EET94927.1| exonuclease VII [Enterococcus faecalis T1]
 gi|256597429|gb|EEU16605.1| exonuclease VII [Enterococcus faecalis ATCC 4200]
 gi|256682986|gb|EEU22681.1| exonuclease VII [Enterococcus faecalis T3]
 gi|256711977|gb|EEU27014.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T8]
 gi|256947567|gb|EEU64199.1| exonuclease VII [Enterococcus faecalis DS5]
 gi|256953092|gb|EEU69724.1| exonuclease VII [Enterococcus faecalis HIP11704]
 gi|256985897|gb|EEU73199.1| exonuclease VII [Enterococcus faecalis JH1]
 gi|256991918|gb|EEU79220.1| exonuclease VII [Enterococcus faecalis Fly1]
 gi|256998200|gb|EEU84720.1| exonuclease VII large subunit [Enterococcus faecalis CH188]
 gi|257157425|gb|EEU87385.1| exonuclease VII [Enterococcus faecalis ARO1/DG]
 gi|257160398|gb|EEU90358.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T11]
 gi|257163052|gb|EEU93012.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis X98]
 gi|294452396|gb|EFG20835.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           PC1.1]
 gi|295113843|emb|CBL32480.1| Exodeoxyribonuclease VII large subunit [Enterococcus sp. 7L76]
 gi|300850587|gb|EFK78336.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TUSoD Ef11]
 gi|306499673|gb|EFM69036.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0109]
 gi|306511337|gb|EFM80340.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0855]
 gi|306515701|gb|EFM84228.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX4248]
 gi|310629264|gb|EFQ12547.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0102]
 gi|310632055|gb|EFQ15338.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0635]
 gi|315029669|gb|EFT41601.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX4000]
 gi|315031734|gb|EFT43666.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0017]
 gi|315034209|gb|EFT46141.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0027]
 gi|315144363|gb|EFT88379.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX2141]
 gi|315147931|gb|EFT91947.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX4244]
 gi|315153056|gb|EFT97072.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0031]
 gi|315156828|gb|EFU00845.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0043]
 gi|315157615|gb|EFU01632.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0312]
 gi|315162957|gb|EFU06974.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0645]
 gi|315165155|gb|EFU09172.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX1302]
 gi|315168055|gb|EFU12072.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX1341]
 gi|315577404|gb|EFU89595.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0630]
 gi|323480219|gb|ADX79658.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis 62]
 gi|327534566|gb|AEA93400.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis
           OG1RF]
 gi|329574368|gb|EGG55940.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX1467]
          Length = 448

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|34581352|ref|ZP_00142832.1| exodeoxyribonuclease large subunit [Rickettsia sibirica 246]
 gi|28262737|gb|EAA26241.1| exodeoxyribonuclease large subunit [Rickettsia sibirica 246]
          Length = 457

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 179/486 (36%), Positives = 259/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+ 
Sbjct: 24  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L +EG
Sbjct: 83  ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 142

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449

Query: 492 GQANAI 497
           G+   +
Sbjct: 450 GEIKVV 455


>gi|227544391|ref|ZP_03974440.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           CF48-3A]
 gi|300909748|ref|ZP_07127209.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           SD2112]
 gi|227185654|gb|EEI65725.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           CF48-3A]
 gi|300893613|gb|EFK86972.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           SD2112]
          Length = 445

 Score =  335 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 152/497 (30%), Positives = 242/497 (48%), Gaps = 63/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VSEL+ +LK   + +  L  V + GE+S +R      H YFSLKD+++ IDA+++
Sbjct: 4   SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    KI+F PE+G++  V+G ++ +  S +YQI I+ + P G G+L  A E+ KKKL  
Sbjct: 62  EHQFRKIKFTPEQGMKVCVVGHVSLYEKSGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF+   K  IP  PK IAV+TS  GAVIRDI   +  R+P+ +V+++P  VQGD+   
Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I + N           D +I+ RGGGS+EDLW FN+E++ RAIANS IP+IS++G
Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKIPVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD T+AD  AD RA TPT AAE+A PVK   +  +L + + RL N +   I +    L
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDVLMTLKDDQNRLLNTMRTKINFDRQQL 294

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N  L+        +       ++D+L ++L    +  +     +   +  R+ +   +H 
Sbjct: 295 NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQEMRMNVERLSGRLTAISPLHR 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+  Q + + Q+ +                                             
Sbjct: 355 VQQQEQLVNQLQKQLVTASLASQ------------------------------------- 377

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           V+   + L S +    + RGYT +  ++   +     L     +
Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426

Query: 486 LINFFDGQANAIVINKA 502
            ++F DG+  A +    
Sbjct: 427 HLHFDDGEVQAEIKKVK 443


>gi|56461112|ref|YP_156393.1| exodeoxyribonuclease VII large subunit [Idiomarina loihiensis L2TR]
 gi|56180122|gb|AAV82844.1| Exonuclease VII, large subunit [Idiomarina loihiensis L2TR]
          Length = 436

 Score =  335 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 123/487 (25%), Positives = 226/487 (46%), Gaps = 57/487 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YSV +L+  ++ ++E     + + GEIS +     SGH YF+LKD  +++   +++   
Sbjct: 2   VYSVRQLNTEIRQLLEQGFGQISLVGEISNF-AAPGSGHWYFTLKDERAQVRCAMFRNAN 60

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            + +  P+ G++ LV  K+T +     YQ+IIE +  +G G L    E+ K+KL  EGLF
Sbjct: 61  QRAKVRPQNGMQVLVRAKVTVYEPRGDYQLIIEQVEDAGQGLLQQRYEQLKEKLSAEGLF 120

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K  +P   + + V+TSPTGA I+DIL  +  R P + VII+P  VQG+    ++  
Sbjct: 121 AAERKRLLPDHIRKVGVLTSPTGAAIKDILAVMKRRDPGVEVIIYPSAVQGEAAVPQLQA 180

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +       E       D+++++RGGGS+EDLW FNDE   R +A + +P ISA+GHE D
Sbjct: 181 MLKTAFERNE------VDVLLVSRGGGSLEDLWCFNDETFARLLATAPMPTISAVGHEID 234

Query: 253 WTLADYAADLRAPTPTGAAEMAVPV--KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           +T+AD+ AD+RAPTP+ AAE+      ++  ++  +     L    +     +       
Sbjct: 235 FTIADFVADVRAPTPSAAAELVTRDQQQQQQKAQALQQRLGLAQQRLLQRLQQRWQFLQT 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                +  + L       D L       L+  + R+ +  +++  R+++      +Q+ +
Sbjct: 295 RLQQQHPQRQLQQQSQLADELQARANRALQNRLARQKQQVSYLHGRLQAMHPQKELQRLQ 354

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +  +QQ + Q++++ L+    ++++ +                               
Sbjct: 355 QKLQTQQQRLPQVMQRVLKDKRTQQQQLMQA----------------------------- 385

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L   +  NTL+RGY  ++    + +  ++ +     I +   
Sbjct: 386 ------------------LNLVSPLNTLERGYAIVRTEKGDVVRSEKQVTVGESIEVRLA 427

Query: 491 DGQANAI 497
           DG   A 
Sbjct: 428 DGNITAK 434


>gi|289525368|emb|CBJ14845.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           Sweden2]
 gi|296434920|gb|ADH17098.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           E/150]
 gi|296438640|gb|ADH20793.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           E/11023]
          Length = 516

 Score =  335 bits (858), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+  S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVFSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   +++   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRSALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  + +      +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|238650991|ref|YP_002916847.1| exodeoxyribonuclease VII large subunit [Rickettsia peacockii str.
           Rustic]
 gi|238625089|gb|ACR47795.1| exodeoxyribonuclease VII large subunit [Rickettsia peacockii str.
           Rustic]
          Length = 457

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 179/486 (36%), Positives = 259/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+ 
Sbjct: 24  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L +EG
Sbjct: 83  ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 142

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYETILLNNTSRLIKYHEQNIVNYN 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449

Query: 492 GQANAI 497
           G+   +
Sbjct: 450 GEIKVV 455


>gi|315149501|gb|EFT93517.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0012]
          Length = 448

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFFQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|307290058|ref|ZP_07569982.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0411]
 gi|306498900|gb|EFM68394.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0411]
          Length = 448

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFE-GPEQQLPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|124007173|sp|Q4UMV4|EX7L_RICFE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 450

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 179/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    
Sbjct: 8   NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+  L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L 
Sbjct: 67  WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNERKARLE 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    
Sbjct: 127 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 185

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+G
Sbjct: 186 EIAEAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + 
Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNII 302

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        ++  +  LD     L   L   I                         
Sbjct: 303 NYDKIHRYLSHYMNNKQQLLDETGFNLLDALPCFIEL----------------------- 339

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                     ++ KI      R      + Y    +      + 
Sbjct: 340 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 373

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I 
Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 433

Query: 489 FFDGQANAI 497
           F DG+   +
Sbjct: 434 FSDGEIKVV 442


>gi|67458645|ref|YP_246269.1| exodeoxyribonuclease VII large subunit [Rickettsia felis URRWXCal2]
 gi|67004178|gb|AAY61104.1| Exodeoxyribonuclease VII, large subunit [Rickettsia felis
           URRWXCal2]
          Length = 462

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 179/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    
Sbjct: 20  NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 78

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+  L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L 
Sbjct: 79  WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNERKARLE 138

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    
Sbjct: 139 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 197

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+G
Sbjct: 198 EIAEAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 254

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + 
Sbjct: 255 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNII 314

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        ++  +  LD     L   L   I                         
Sbjct: 315 NYDKIHRYLSHYMNNKQQLLDETGFNLLDALPCFIEL----------------------- 351

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                     ++ KI      R      + Y    +      + 
Sbjct: 352 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I 
Sbjct: 386 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 445

Query: 489 FFDGQANAI 497
           F DG+   +
Sbjct: 446 FSDGEIKVV 454


>gi|116333614|ref|YP_795141.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis ATCC
           367]
 gi|116098961|gb|ABJ64110.1| Exodeoxyribonuclease VII large subunit [Lactobacillus brevis ATCC
           367]
          Length = 451

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 241/500 (48%), Gaps = 62/500 (12%)

Query: 15  YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK    V+  L  V + GEIS +R    + H YFSLKD+H++I AI++K  
Sbjct: 7   LTVTALTQYLKRKFDVDPYLGKVYLTGEISNFRLRPHA-HQYFSLKDDHAKISAIMFKSA 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F PE G++ LV G+I+ +  S  YQI +E + P G G L  A E+ K+KL  EGL
Sbjct: 66  FEKLKFTPETGMKVLVTGRISLYEPSGSYQIYVERMEPDGVGQLYQAYEQLKRKLAAEGL 125

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+   + P+   PK IAV+TSP+GAVIRDI+     RFP+ +++++P  VQGD    +I 
Sbjct: 126 FTAPKR-PLSRFPKRIAVVTSPSGAVIRDIITTTRRRFPIAQIVLYPAVVQGDAAADDIV 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  +        D +I+ RGGGSIEDLW FN+E + RAIA S +P+IS++GHET
Sbjct: 185 RQIQRANAAQ------SFDTLIIGRGGGSIEDLWPFNEERVARAIAASQLPVISSVGHET 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--S 309
           D T+AD  AD+RA TPT AAE+AVPV       L     RL N +   I ++   LN   
Sbjct: 239 DTTIADLVADVRAATPTAAAELAVPVLSDELLKLQQQRTRLLNAMANRINFQQERLNKLM 298

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                    +       RLDR  + L  N++ ++ ++ + F      + S   +  +Q+N
Sbjct: 299 TAYVFRQPQRLYETYVQRLDRAQQALGRNMQDLVTQRQQQFQLAQQALASRSPLARVQRN 358

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +  + +    +    +                                            
Sbjct: 359 QLVVQQTATRLATEAR-------------------------------------------- 374

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                + +    V      L   +    + RGY+ +   +++ +   + L     + ++ 
Sbjct: 375 ---RYVTAKQEHVGQLINGLDYLSPLKIMGRGYSYVT-QDDHVVRSVQQLQPGPAM-VHL 429

Query: 490 FDGQANAIVINKAPPKEQPT 509
            DG A+A +    P  E+ T
Sbjct: 430 SDGTASAEIKTITPASEEKT 449


>gi|315173306|gb|EFU17323.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX1346]
          Length = 448

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 146/503 (29%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQGD+ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGDQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|70726393|ref|YP_253307.1| exodeoxyribonuclease VII large subunit [Staphylococcus haemolyticus
           JCSC1435]
 gi|82592840|sp|Q4L6M4|EX7L_STAHJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|68447117|dbj|BAE04701.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 445

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 151/495 (30%), Positives = 241/495 (48%), Gaps = 61/495 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ ++K+  + +  L  + ++GE+S ++  HSSGH YF++KD  S I A+++
Sbjct: 2   SEYLSVTTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKDSVISAMMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG  N++ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ K+KL +
Sbjct: 61  KGNANQLTFEPKEGDEVLLEARVSVYERRGNYQIYVNKMELDGIGNLYQKLEQLKQKLKK 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EG F+++HK PIP  PK IA++T+ TGA IRDI   I+ R+PL   I     VQG +  +
Sbjct: 121 EGFFNNEHKKPIPRFPKKIAILTASTGAAIRDIQSTINSRYPLAEKIQISTLVQGTQAKE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I   ++L         D II+ RGGGSIEDLW+FN+E +V+AI     PIISA+G
Sbjct: 181 DIIKNIKYADSL-------GVDTIIVGRGGGSIEDLWNFNEEDVVKAIFECQTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL+D+ AD+RA TPT AA MA P +  L   +   +  L+  I + ++ +   L+
Sbjct: 234 HETDFTLSDFVADVRAATPTQAAVMATPDQYELMQQIKQYQFSLSRYIKQYLEKQYKQLD 293

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L                  R D L R+L   L   I  K      +        L   I
Sbjct: 294 HLASYYKFKQPSLLYDQQIQRKDDLERQLTQLLLSKIENKKYQLKVLHQNFNVKTLNQTI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +N++ ++  +  +  +  +++    LE K K+                           
Sbjct: 354 LQNKRQLVNVKNRLSNLTMKNIHNNKLEFKNKV--------------------------- 386

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                                +L + +  NT+ RGY+ I + ++  IT  ++L+    I 
Sbjct: 387 --------------------ELLNNLSPTNTMLRGYSII-NKDDKVITSTQDLSKDDEIT 425

Query: 487 INFFDGQANAIVINK 501
           +   DG  +AIV   
Sbjct: 426 LAMKDGNVDAIVKKV 440


>gi|166154539|ref|YP_001654657.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           434/Bu]
 gi|166155414|ref|YP_001653669.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335801|ref|ZP_07224045.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           L2tet1]
 gi|226694640|sp|B0B7P6|EX7L_CHLT2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226694641|sp|B0BBW1|EX7L_CHLTB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|165930527|emb|CAP04022.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           434/Bu]
 gi|165931402|emb|CAP06976.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 516

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 161/514 (31%), Positives = 252/514 (49%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N         R   +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMRVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   +++   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  + +      +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|29375561|ref|NP_814715.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis V583]
 gi|227555089|ref|ZP_03985136.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis HH22]
 gi|81838968|sp|Q836W6|EX7L_ENTFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|29343022|gb|AAO80785.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           V583]
 gi|227175757|gb|EEI56729.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis HH22]
 gi|315574276|gb|EFU86467.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0309B]
 gi|315581569|gb|EFU93760.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX0309A]
          Length = 448

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 246/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I + +   +       D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQRADAQSD------FDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|307275461|ref|ZP_07556603.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX2134]
 gi|306507849|gb|EFM76977.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX2134]
          Length = 448

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LKIHYADGTVQANVETITAKKEE 447


>gi|15892949|ref|NP_360663.1| exodeoxyribonuclease VII large subunit [Rickettsia conorii str.
           Malish 7]
 gi|15620143|gb|AAL03564.1| exodeoxyribonuclease large subunit [Rickettsia conorii str. Malish
           7]
          Length = 457

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 180/486 (37%), Positives = 258/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+ 
Sbjct: 24  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK KL +EG
Sbjct: 83  ILAKITFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKAKLEKEG 142

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKMTAANEKIFNIKFSD 449

Query: 492 GQANAI 497
           G+   +
Sbjct: 450 GEIKVV 455


>gi|22095672|sp|Q92GU6|EX7L_RICCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 444

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 180/486 (37%), Positives = 258/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+ 
Sbjct: 11  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 69

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK KL +EG
Sbjct: 70  ILAKITFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKAKLEKEG 129

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 130 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 188

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 189 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 245

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 246 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 305

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 306 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 339

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 340 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 376

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 377 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKMTAANEKIFNIKFSD 436

Query: 492 GQANAI 497
           G+   +
Sbjct: 437 GEIKVV 442


>gi|297748459|gb|ADI51005.1| Exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D-EC]
 gi|297749339|gb|ADI52017.1| Exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D-LC]
          Length = 542

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 28  SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 86

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 87  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 146

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 147 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 206

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 207 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 261

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   + +   + I  K N L
Sbjct: 262 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 321

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 322 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 380

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  +        +  Q   R+   
Sbjct: 381 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 440

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 441 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 500

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 501 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 534


>gi|257081232|ref|ZP_05575593.1| exonuclease VII [Enterococcus faecalis E1Sol]
 gi|256989262|gb|EEU76564.1| exonuclease VII [Enterococcus faecalis E1Sol]
          Length = 448

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 144/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YF+LKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFNLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|28378301|ref|NP_785193.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           WCFS1]
 gi|254556508|ref|YP_003062925.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           JDM1]
 gi|31563098|sp|Q88WM7|EX7L_LACPL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|28271136|emb|CAD64041.1| exodeoxyribonuclease VII, large subunit [Lactobacillus plantarum
           WCFS1]
 gi|254045435|gb|ACT62228.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           JDM1]
          Length = 447

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 157/498 (31%), Positives = 243/498 (48%), Gaps = 61/498 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +V+ L+ +LK   E    L  V + GE+S YR   ++ H YFSLKD+H++I A
Sbjct: 2   SESQQYLTVTALTQYLKRKFEVDPYLGKVYLTGEVSNYRPRPNT-HQYFSLKDDHAKISA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           I++K    K++F PEEG++ LV+G+I  +  S  YQI +E + P G G L  A E+ KKK
Sbjct: 61  IMFKSAFAKVKFQPEEGMKVLVVGRIGLYEPSGSYQIYVERMEPDGVGALYQAYEQLKKK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L  EGLFS   K P+P  PK IAV+TS +GAVIRDI+     RFP+ ++++FP +VQGD 
Sbjct: 121 LAAEGLFSAPKK-PLPRFPKRIAVVTSRSGAVIRDIITTTRRRFPIAQIVLFPSQVQGDA 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              EI+  I + N           D +I+ RGGGSIEDLW FN+E++ RAIA S +P+IS
Sbjct: 180 AAAEISRQIERANA------QGDFDTLIIGRGGGSIEDLWPFNEEVVARAIAQSQLPVIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD T+AD  AD+RA TPT AAE+AVPV   +   L   + R+ N     ++    
Sbjct: 234 SVGHETDTTIADLVADVRAATPTAAAELAVPVYNDVLLQLKQDQTRVFNAFQNFVQRDRQ 293

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            LN L         ++       +LD L   L+   +       +H+  +  +++    I
Sbjct: 294 RLNKLQTSYVFTQPNRLYEGYLQKLDFLNERLKQAGQNNFNLASQHYQRVFQQLRQQTPI 353

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
           H +++ +  +L  QQ + +  +  +R    +  + +                        
Sbjct: 354 HQVRQAQTQLLNLQQRLNRGTQLVVRQKRQQLTQTVQS---------------------- 391

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                                    L   +    + RGY  +   +   +   + L  + 
Sbjct: 392 -------------------------LDLLSPLKIMTRGYAFVT-ADEQVVHGVKQLQPEQ 425

Query: 484 RILINFFDGQANAIVINK 501
            + I+  DG+A A +   
Sbjct: 426 TVAIHMADGEAQAQITKI 443


>gi|296436772|gb|ADH18942.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           G/11222]
          Length = 516

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   +++   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  +        +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|257086338|ref|ZP_05580699.1| exonuclease VII [Enterococcus faecalis D6]
 gi|256994368|gb|EEU81670.1| exonuclease VII [Enterococcus faecalis D6]
 gi|315026956|gb|EFT38888.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           TX2137]
          Length = 448

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 144/503 (28%), Positives = 243/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    I  +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGITAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGAVQANVETITAKKEE 447


>gi|255311132|ref|ZP_05353702.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 6276]
 gi|255317433|ref|ZP_05358679.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           6276s]
          Length = 516

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   + +   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTLAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  +        +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|299137944|ref|ZP_07031124.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298599874|gb|EFI56032.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 531

 Score =  334 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 123/503 (24%), Positives = 224/503 (44%), Gaps = 58/503 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +     +   ++V +L   ++ +VE +   + V GEIS +R   +SGH YF+LKD ++
Sbjct: 84  PVASTPQAEARVWTVGDLVREVRGLVERSYGQITVDGEISNWR-PAASGHCYFTLKDGNA 142

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  ++++   + + F P++G    + G+++ +    + Q+I E++   G G LL A+++
Sbjct: 143 QLSVVMFRRQASLLRFRPKDGDAVRLHGQVSVYESRGQMQLIAETMEEVGQGALLAAVQR 202

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            K++L  EG+F  +    +P  PK I V+TS  GA +RDI++    R   + ++I+P  V
Sbjct: 203 LKERLRREGVFDRERP--LPAFPKCIGVVTSLQGAALRDIVKVCRRRHAAVNLLIYPAAV 260

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG  C +E+   +   +   +       D++I+ARGGGS EDL  F+DE + RAIA  +I
Sbjct: 261 QGPRCAEEVIAGVEWFSAHPQLA-----DVLIVARGGGSWEDLHGFDDEGVARAIAACAI 315

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I+ IGH TD T+ D AAD+ APTP+ AAE+    +  ++  +  L +R+       I 
Sbjct: 316 PVIAGIGHATDTTITDAAADVCAPTPSAAAELVTAAQYRIEERVERLRSRVFRAGNYEIL 375

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                 + L     L      L     RLD L    E      +  +      + +R++ 
Sbjct: 376 RARQRFSRLSAESALRRLRDALGRREQRLDELSFRAESAAARTLRSREERLARLTSRLQR 435

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             +   + ++++ +   Q  ++ +                +   M R Q           
Sbjct: 436 QDVALRLAEDKRRLERLQVRLQSVG---------------STATMRRNQ----------- 469

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                 V      L++ +    L+RGY  +   +   +    N+
Sbjct: 470 ---------------------QVERCVSRLEALSPLRVLERGYALVYGPDGKLLRSTANV 508

Query: 480 ATKTRILINFFDGQANAIVINKA 502
                I+    DG   A V +K 
Sbjct: 509 VAYDTIVARLADGSVRARVTSKE 531


>gi|148544407|ref|YP_001271777.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri DSM
           20016]
 gi|184153770|ref|YP_001842111.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri JCM
           1112]
 gi|227363168|ref|ZP_03847302.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           MM2-3]
 gi|325682727|ref|ZP_08162243.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           MM4-1A]
 gi|226697592|sp|A5VKR6|EX7L_LACRD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697593|sp|B2G849|EX7L_LACRJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|148531441|gb|ABQ83440.1| Exodeoxyribonuclease VII large subunit [Lactobacillus reuteri DSM
           20016]
 gi|183225114|dbj|BAG25631.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri JCM
           1112]
 gi|227071774|gb|EEI10063.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           MM2-3]
 gi|324977077|gb|EGC14028.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri
           MM4-1A]
          Length = 445

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 151/497 (30%), Positives = 241/497 (48%), Gaps = 63/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VSEL+ +LK   + +  L  V + GE+S +R      H YFSLKD+++ IDA+++
Sbjct: 4   SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    KI+F PE+G++  V+G ++ +  S +YQI I+ + P G G+L  A E+ KKKL  
Sbjct: 62  EHQFRKIKFTPEQGMKVCVVGHVSLYEKSGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF+   K  IP  PK IAV+TS  GAVIRDI   +  R+P+ +V+++P  VQGD+   
Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I + N           D +I+ RGGGS+EDLW FN+E++ RAIANS IP+IS++G
Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKIPVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD T+AD  AD RA TPT AAE+A PVK      +L + + RL N +   I +    L
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDALMTLKDDQNRLLNTMRTKINFDRQQL 294

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N  L+        +       ++D+L ++L    +  +     +   +  R+ +   +H 
Sbjct: 295 NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQELQMNVERLSGRLTAASPLHR 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+  Q + + ++ +                                             
Sbjct: 355 VQQQEQLVDQLKKQLVTASLASQ------------------------------------- 377

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           V+   + L S +    + RGYT +  ++   +     L     +
Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426

Query: 486 LINFFDGQANAIVINKA 502
            ++F DG+  A +    
Sbjct: 427 HLHFDDGEVQAEIKKVK 443


>gi|15605052|ref|NP_219836.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis
           D/UW-3/CX]
 gi|14194712|sp|O84333|EX7L_CHLTR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|3328747|gb|AAC67922.1| Exodoxyribonuclease VII [Chlamydia trachomatis D/UW-3/CX]
          Length = 516

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K P+P   ++I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N             +I+ARGGGSIEDLW FN+E +V++I  SSIPIISA+
Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+A+D+RAPTP+ AAE+     +  +  L NL   + +   + I  K N L
Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     ++  LD     LE  +E  +    + F      +KSD LI    
Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354

Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
                    +   +  I  K+  + Q+    L+   L  +        +  Q   R+   
Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414

Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                      + +L   + F + H +               S   KN LKRG+  + D 
Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508


>gi|332638328|ref|ZP_08417191.1| exodeoxyribonuclease VII large subunit [Weissella cibaria KACC
           11862]
          Length = 421

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 138/494 (27%), Positives = 214/494 (43%), Gaps = 80/494 (16%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS L+ +LK     +  L  V V GEIS YR     GH YFSLKD+ + ++A ++K  
Sbjct: 5   LTVSALTSYLKRKFTADPYLKEVYVTGEISNYRQRP--GHQYFSLKDDGAVLNATMFKFA 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  E G++   +G +  +  +  Y +II+ L P G G L  A E+ K KL  EGL
Sbjct: 63  FQKLQFKLEPGMKVNAVGHMDLYAPNGSYSLIIDKLEPDGVGALYQAYEQLKAKLSAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    + PIP  PK IAVITSP+GAVIRDI+  +  R+P+  ++++P  VQGD     + 
Sbjct: 123 FDQLRR-PIPRFPKKIAVITSPSGAVIRDIMTTVRRRYPIAEIVLYPAVVQGDGAVPSLT 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             +  +            D++I+ RGGGSIEDLW FN+E + R +    +PIIS++GHET
Sbjct: 182 KQMTAV------AEAADYDVLIMGRGGGSIEDLWAFNEEAVARQMLTMPMPIISSVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+AD+ AD RA TPT AAE+A PV                                  
Sbjct: 236 DTTIADFVADQRAATPTAAAELATPVPLADLWLG-------------------------- 269

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                    +   + RL          ++  +       + + N           +   Q
Sbjct: 270 ---------IQQMQQRLVNQ-------MQRQVVANQERLSRLQNSYVLTQPARLYEGYLQ 313

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +   QQ ++Q V                            +         L  R+   +
Sbjct: 314 RLDIAQQRLQQAVTTT-------------------------VTQRQHQFDLLAPRLVNAM 348

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           + +++     V      LQ  +    L RGY+ ++  + + +T   ++A    + I    
Sbjct: 349 TRQVERSQERVGRAVAGLQLVSPLAILARGYSVVEH-DTHILTTVDDVAVGDTVHIRLAT 407

Query: 492 GQANAIVINKAPPK 505
           G+ +A V  K   K
Sbjct: 408 GELDATVTAKESEK 421


>gi|165933606|ref|YP_001650395.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str.
           Iowa]
 gi|165908693|gb|ABY72989.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str.
           Iowa]
          Length = 457

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 179/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    W+ 
Sbjct: 24  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTCWRP 82

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L + G
Sbjct: 83  ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKAG 142

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449

Query: 492 GQANAI 497
           G+   +
Sbjct: 450 GEIKVV 455


>gi|256960161|ref|ZP_05564332.1| exonuclease VII [Enterococcus faecalis Merz96]
 gi|293382529|ref|ZP_06628463.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           R712]
 gi|293387871|ref|ZP_06632410.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           S613]
 gi|312906868|ref|ZP_07765865.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           DAPTO 512]
 gi|312978877|ref|ZP_07790603.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           DAPTO 516]
 gi|256950657|gb|EEU67289.1| exonuclease VII [Enterococcus faecalis Merz96]
 gi|291080077|gb|EFE17441.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           R712]
 gi|291082718|gb|EFE19681.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           S613]
 gi|310627122|gb|EFQ10405.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           DAPTO 512]
 gi|311288314|gb|EFQ66870.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis
           DAPTO 516]
          Length = 448

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F P+EG++ +V+G+I+ +  S  YQI IE + P G G L  AL + ++KL
Sbjct: 60  MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IAV+TSP+GAVIRDI+  +  R+P+ ++++FP  VQG++ 
Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I +             D +I+ RGGGSIEDLW FN+E + RAI  ++ PIIS+
Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVSRAIHAATTPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +    +RL    + L++ +   
Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L         ++       +LDR+ + L   +  I  +K R    II +++      
Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++++Q +   Q++++  +                                        
Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                       +     +   + L   +    + RGY+     +   +     L    +
Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I++ DG   A V      KE+
Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447


>gi|239627504|ref|ZP_04670535.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517650|gb|EEQ57516.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 428

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 130/493 (26%), Positives = 223/493 (45%), Gaps = 79/493 (16%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+VS+++ +++++   +   + + ++GE+S  +  H+SGH YF+LKD  S+I A+++ G
Sbjct: 4   VYTVSQVTAYIRNMFTQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDGGSQIAAVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  EEG E  V G +  +    +YQ+  + +   G G L    EK + +L E G
Sbjct: 63  QRKGLAFELEEGQEVTVTGNVDVYERDGRYQLYAKEITREGRGDLFARFEKLRGELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F   +K PIP   + + ++T+ TGA IRDI+   + R P ++++++P  VQG++    I
Sbjct: 123 MFDGCYKQPIPKYARKVGIVTASTGAAIRDIMNISARRNPYVQLVLYPALVQGEKAKYSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+ +         D+II+ RGGGSIEDLW FN+EM+ RAI N S P+ISA+GHE
Sbjct: 183 VKGIETLDAM-------GLDVIIVGRGGGSIEDLWAFNEEMVARAIFNCSTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV                                   
Sbjct: 236 TDVTIADYVADLRAPTPSAAAELAVFDYS------------------------------- 264

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                           ++    + L  ++E  + R +        R+K       +   R
Sbjct: 265 ------------QFEEQVRLYSQVLNRSMERKLERLHFRLEQGKMRLKLRSPERLLVDRR 312

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + + +  +E+                         + K+++      ++    R++  
Sbjct: 313 QRLADIESFLER-------------------------RLKDKLEQDRRSLEDRRQRLDMY 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +S  +K+    +++    L + +    L  GY  + D     +          RI I+  
Sbjct: 348 MSDSLKAGQHRLALAAGRLDALSPLKKLSGGYGFVTDPRGKAVRSIEQTGIGDRIGISVR 407

Query: 491 DGQANAIVINKAP 503
           DG+  A V     
Sbjct: 408 DGRIEAQVTKTVA 420


>gi|304413110|ref|ZP_07394583.1| exodeoxyribonuclease VII large subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283953|gb|EFL92346.1| exodeoxyribonuclease VII large subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 451

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 133/500 (26%), Positives = 224/500 (44%), Gaps = 54/500 (10%)

Query: 8   NSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            S+  P  ++VS L+ H++ ++E  +  + +  EIS +    SSGH YF+LKD  +++  
Sbjct: 2   PSISVPSIFTVSLLNQHVRQLLEMEMGQIRLSAEISNF-SQPSSGHWYFTLKDERAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++ +   + F P  G + L+   IT +     YQ+I E++ P+G G L    E+ +++
Sbjct: 61  VMFRNSNRFVTFKPRNGQQVLIRASITLYEARGDYQLIAENMQPAGDGLLQQQFEQLRQQ 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF   HK P+P   K I VITS  GAV+ D+LQ +  R P L V+I+P  VQG +
Sbjct: 121 LTAEGLFKQDHKKPLPHSAKQIGVITSIHGAVLHDVLQVLQRRDPSLPVVIYPTSVQGVD 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI   N   E       D++I+ RGGG++EDLW FNDE +VRAI NS +PI+S
Sbjct: 181 APWQIMKAIEIANQRAE------CDVLIVCRGGGALEDLWSFNDERVVRAIFNSRLPIVS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD TL D+ ADLRAPTP+ AAE+    +  L   +   + R+   +   +     
Sbjct: 235 AVGHETDVTLVDFVADLRAPTPSAAAELLSRDQLELMRQIAVQQQRMAMALDYYLAQCQR 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             +     L      L  +  + +                                    
Sbjct: 295 QFSQFKHRLQRQHPQLQLANQQTE------------------------------------ 318

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                  ++  Q  +EQ +   +      ++       +++ +     +  H  I++   
Sbjct: 319 -------LVRLQNRLEQAISTQM--AEQLQQLHFLQQRLIKLRLLEYFYGYHQRIQQQAY 369

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            ++  L  +        S+    L++ +    L RGY     +    +   +      +I
Sbjct: 370 GLKQALERQCNQYRQRFSVVCSRLEAVSPLAILARGYNVTHTSAGTVLNSIKQGQRGEKI 429

Query: 486 LINFFDGQANAIVINKAPPK 505
           +    DG   + +      K
Sbjct: 430 ITRLQDGSIESEITQINAVK 449


>gi|300767237|ref|ZP_07077149.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180451|ref|YP_003924579.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|300495056|gb|EFK30212.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308045942|gb|ADN98485.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 447

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 61/498 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +V+ L+ +LK   E    L  V + GE+S YR   ++ H YFSLKD+H++I A
Sbjct: 2   SESQQYLTVTALTQYLKRKFEVDPYLGKVYLTGEVSNYRPRPNT-HQYFSLKDDHAKISA 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           I++K    K++F PEEG++ LV+G+I  +  S  YQI +E + P G G L  A E+ KKK
Sbjct: 61  IMFKSAFAKVKFQPEEGMKVLVVGRIGLYEPSGSYQIYVERMEPDGVGALYQAYEQLKKK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L  EGLFS   K P+P  P+ IAV+TS +GAVIRDI+     RFP+ ++++FP +VQGD 
Sbjct: 121 LAAEGLFSAPKK-PLPRFPRRIAVVTSRSGAVIRDIITTTRRRFPIAQIVLFPSQVQGDA 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              EI+  I + N           D +I+ RGGGSIEDLW FN+E++ RAIA S +P+IS
Sbjct: 180 AAAEISRQIERANA------QGDFDTLIIGRGGGSIEDLWPFNEEVVARAIAQSQLPVIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD T+AD  AD+RA TPT AAE+AVPV   +   L   + R+ N     ++    
Sbjct: 234 SVGHETDTTIADLVADVRAATPTAAAELAVPVYNDVLLQLKQDQTRVFNAFQNFVQRDRQ 293

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            LN L         ++       +LD L   L+   +       +H+  +  +++    I
Sbjct: 294 RLNKLQTSYVFTQPNRLYEGYLQKLDFLNERLKQAGQNNFNLASQHYQRVFQQLRQQTPI 353

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
           H +++ +  +L  QQ + +  +  +R    +  + +                        
Sbjct: 354 HQVRQAQTQLLNLQQRLNRGTQLVVRQKRQQLTQTVQS---------------------- 391

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                                    L   +    + RGY  +   +   +   + L  + 
Sbjct: 392 -------------------------LDLLSPLKIMTRGYAFVT-ADEQVVHGVKQLQPEQ 425

Query: 484 RILINFFDGQANAIVINK 501
            + I+  DG+A A +   
Sbjct: 426 TVAIHMADGEAQAQITKI 443


>gi|289665663|ref|ZP_06487244.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289671326|ref|ZP_06492401.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 445

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 126/492 (25%), Positives = 223/492 (45%), Gaps = 60/492 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      SSGH YF+LKD  ++I   ++K
Sbjct: 5   NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  +  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVVARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GL   + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLLDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARIAQLQQHALGSAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R +   R+L   +  ++ R          +++S        
Sbjct: 298 LALRLRAHSPQARLQLLHRRQEEAGRQLRARMTQVLERLQARVQRGQAQLQSHNPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +  +                                            
Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRIL 486
           +  +  +++     +   TR L++ +   T+ RGY    +  + + +     +    R+ 
Sbjct: 369 QAAMQRRLQHDQVQLRSITRSLEAVSPLATVARGYAIMTRPADGSVVRSAAEVVAGERLR 428

Query: 487 INFFDGQANAIV 498
               DG     V
Sbjct: 429 AQLADGSIEVRV 440


>gi|186475307|ref|YP_001856777.1| exodeoxyribonuclease VII large subunit [Burkholderia phymatum
           STM815]
 gi|184191766|gb|ACC69731.1| exodeoxyribonuclease VII, large subunit [Burkholderia phymatum
           STM815]
          Length = 459

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 134/490 (27%), Positives = 234/490 (47%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  + +++E +   V V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 20  PVSVLNRAIGNMLERSFPLVWVAGEVSNFT-RAASGHWYFSIKDAQAQMRCVMFRGRAQY 78

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF  
Sbjct: 79  AEFTPREGDKIEVRALVTMYEPRGELQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFDP 138

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           Q K  +P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG     ++A  +
Sbjct: 139 QRKRALPAHPRSIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGVSAKLAAMV 198

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N   E       D++I+ RGGGSIEDLW FN+E++ RAIA S +P++S +GHETD+T
Sbjct: 199 EAANRRHE------VDVLIVCRGGGSIEDLWAFNEEVLARAIAASDVPVVSGVGHETDFT 252

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L +  A L     R+++ +   L+ L + L
Sbjct: 253 IADFAADVRAPTPTGAAELVSPQRVLLLRDLDHRHATLARGFGRMMERRAQQLDWLARRL 312

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L+  R  L +L   L       +      F+ +  R +      ++  +R H+ 
Sbjct: 313 VSPAERLARQRTHLQQLSVRLASAGVRPVRDARARFSLVQMRWQRWRP--DLTSHRSHVT 370

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              + +E+ + +                                 ++ L  R+       
Sbjct: 371 GLAERLERALLRQHERQVA-------------------------RVETLAARL------- 398

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                          +  + + TL+RGY ++ D      +    +L    R+ ++  +G 
Sbjct: 399 ---------------EVLSPQRTLERGYAALLDAQSGRAVRAPSSLKPGRRMTVHLAEGS 443

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 444 ADIALSDVQP 453


>gi|269468101|gb|EEZ79811.1| exonuclease VII, large subunit [uncultured SUP05 cluster bacterium]
          Length = 430

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 142/458 (31%), Positives = 220/458 (48%), Gaps = 32/458 (6%)

Query: 46  GIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105
              +SGH YFSLKD+  +I   +++     I+F PE G+E LV    T +     +Q+II
Sbjct: 2   SRPASGHWYFSLKDSRGQIRCALFRLNQRNIKFNPENGMEILVRAAPTLYEARGDFQLII 61

Query: 106 ESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
           + + P G G L  A E+ K KL +EGLF   HK  +P  PK I VI+S  GAVIRDI++ 
Sbjct: 62  QHVEPVGVGNLNLAFEQLKNKLKKEGLFDTIHKKSLPKEPKTIGVISSSNGAVIRDIVKV 121

Query: 166 ISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224
           +  R+P   V++F   VQG+   + +A A+             R D++I+ARGGGS+EDL
Sbjct: 122 LHRRYPFAEVLLFDSMVQGEGSAERLATAVQ------MADESNRCDVLIIARGGGSLEDL 175

Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284
           W FN+E++ RAI     P+ISA+GHETD T+AD+ +D+RAPTP+ AA MA P +  L S+
Sbjct: 176 WAFNEEVLARAIFMVKTPLISAVGHETDTTIADFVSDVRAPTPSAAAMMATPDRLELLSN 235

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
              L  +L     + +    + +N L   +P   + L     +LD     L H  + I+ 
Sbjct: 236 TDKLYLQLRQFSKQKLTLYKHQINQLKARIPTPSKQLYLFSQQLDYFTFRLSHQTKTIVG 295

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
                   +  ++K    I NIQ  ++     +Q + Q                      
Sbjct: 296 LNRGKLTTLFEQLKQHSPIANIQHKKEINALSKQQLTQ---------------------- 333

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
              Q  + +   ++ +  L  R+E  ++  ++S    +S     L   +  NTL RGY+ 
Sbjct: 334 ---QIYHLVGQNNSALHALSERLEQSINALVESQKNKLSSCIIGLNHLSPLNTLSRGYSI 390

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
               NN  +  K  +   + I     DG+  + V    
Sbjct: 391 TSTDNNQVLLSKNTVKIGSSITTQLADGKIYSKVSKIE 428


>gi|15604518|ref|NP_221036.1| exodeoxyribonuclease VII large subunit [Rickettsia prowazekii str.
           Madrid E]
 gi|14194742|sp|Q9ZCP8|EX7L_RICPR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|3861212|emb|CAA15112.1| EXODEOXYRIBONUCLEASE LARGE SUBUNIT (xseA) [Rickettsia prowazekii]
 gi|292572306|gb|ADE30221.1| Exodeoxyribonuclease VII,large subunit [Rickettsia prowazekii Rp22]
          Length = 453

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 178/489 (36%), Positives = 264/489 (53%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ V+GEISG +   SSGHAYF+LK+N + +    
Sbjct: 8   NQASKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-RASSGHAYFNLKENTAILACTC 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+  L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L 
Sbjct: 67  WRPILAKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAGLGAMLQILNERKTRLE 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+ +   PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+ V VQG+    
Sbjct: 127 KEGLFNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWQVSVQGENSGH 185

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+G
Sbjct: 186 EMAEAIEGFNNLEE---IHKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L +++ + E  L N   RLIKY   ++ 
Sbjct: 243 HEADYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTIQSYEKILFNNTNRLIKYHEQSIV 302

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        ++  +  LD +   L   L   I                         
Sbjct: 303 NYDKIHSYFSYYINNRQQLLDEIGFNLLDVLIRFI------------------------- 337

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                     K+ KI      R      I Y    +      + 
Sbjct: 338 ------------------------ALKETKIKSFSKERINYAKIINYKILELTHQTAYLF 373

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K     +  + I 
Sbjct: 374 KSVNNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGDAGNFLSSKSAATNEQSLNIK 433

Query: 489 FFDGQANAI 497
           FFDG+ N +
Sbjct: 434 FFDGEINVV 442


>gi|322436639|ref|YP_004218851.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321164366|gb|ADW70071.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 528

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 57/497 (11%)

Query: 15  YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           Y+V +L   ++  VE +    + V GEIS  R   +SGH Y +LKD  +++  ++++   
Sbjct: 83  YTVRQLLNEIRQSVERSYEGTLTVEGEISNCR-PAASGHVYLTLKDGDAQLSVVMFRRQA 141

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + + F P++G+   V G+I+ +    + Q+I E++ P G G L  A E+ KK+L  EGLF
Sbjct: 142 SLLGFKPKDGLSVEVRGRISVYETRGQLQLIAETMRPRGEGALQLAFEQLKKRLAAEGLF 201

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P  + ++TS  GA + DI+  +  R   L ++++P  +QG +C   +  
Sbjct: 202 DAARKKPLPPFPHCVGIVTSANGAALTDIINVVRRRHARLNLLVYPATMQGPQCAPSVMA 261

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +   N   +     R D+I++ARGGGS EDL  FNDE + R IA S +P++SAIGHE D
Sbjct: 262 GVRWFNKHPD-----RVDLILIARGGGSFEDLAGFNDEALARVIAESELPVVSAIGHEID 316

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311
            T+AD+ ADLRAPTP+ AAE+    +  +   +  LEAR+       + +    L  L  
Sbjct: 317 TTIADFVADLRAPTPSAAAELITVAQHRIGERISALEARVQRAGRYHLMHARQRLFRLSA 376

Query: 312 -KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + L     ++S    ++D L   +      +   +      +  R++       +   +
Sbjct: 377 EQVLARLRDSISLRHQKVDELQFRMVAAFARVERLRSGRVIALEARLRRQDPTVRVAMAK 436

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +      +++  K  +    +                                R+E  
Sbjct: 437 RRLEIAVARMDRAGKDMVARRGV--------------------------------RLERA 464

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                          +  L++ +    L RGY  +   +   +        +  I     
Sbjct: 465 ---------------SARLEALSPLAVLNRGYAIVYGADGGILRDAGEAGVEQVIRARLA 509

Query: 491 DGQANAIVINKAPPKEQ 507
            G   A +      ++ 
Sbjct: 510 RGSVRARITEIETTEKA 526


>gi|148979630|ref|ZP_01815635.1| exodeoxyribonuclease VII large subunit [Vibrionales bacterium
           SWAT-3]
 gi|145961715|gb|EDK27012.1| exodeoxyribonuclease VII large subunit [Vibrionales bacterium
           SWAT-3]
          Length = 414

 Score =  333 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 218/468 (46%), Gaps = 57/468 (12%)

Query: 41  ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK 100
           IS +     SGH Y +LKD+ +++   +++G   ++ F P+ G + LV  +++ +     
Sbjct: 1   ISNFSA-PVSGHWYLTLKDSRAQVKCAMFRGNNRRVTFRPQNGNQVLVKARLSLYEPRGD 59

Query: 101 YQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIR 160
           YQ+IIES+ P G G L    EK K  L  EGLF+   K  +P  PK + V+TS TGA + 
Sbjct: 60  YQLIIESMQPEGDGKLQQEFEKLKMNLAAEGLFAQSSKQALPEHPKRVGVVTSKTGAALF 119

Query: 161 DILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219
           DIL  +  R P L V+++P  VQG+E   +IA AI + N   E       D++I+ RGGG
Sbjct: 120 DILDVLKRRDPSLPVVVYPTMVQGEEAAIQIAQAIGRANERNE------CDVLIVGRGGG 173

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
           S+EDLW FN+E++ R IA S IPIISA+GHE D T+AD+ AD+RAPTP+ AAE+      
Sbjct: 174 SLEDLWCFNNEIVARTIAASQIPIISAVGHEVDVTIADFVADMRAPTPSAAAELVSRDNS 233

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEH 337
           H + +  +  ARL + I  ++  +  +  +L   L   +    L     +LD L   L  
Sbjct: 234 HKEQAFASKRARLVSAIRHVLIKQAQSTQALKHRLERQHPSYQLQKQSQQLDDLDMRLRR 293

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
            +   + +  +      ++++ +  +  + + + H+   +Q                   
Sbjct: 294 GMAQYLKQHAQRVERKQHQLQLNSPVKRLGEQKLHLQRSEQ------------------- 334

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                                       ++   +   + +    +++    L++ +   T
Sbjct: 335 ----------------------------KLLDAMDKTLLTTRHQLAMAAEKLETVSPLAT 366

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           LKRGY+    T++  ++   ++     I     DG   + V  K    
Sbjct: 367 LKRGYSITHSTSSKTVSSINDVEVGEVITTQVEDGVIESQVTQKTAKA 414


>gi|194466517|ref|ZP_03072504.1| exodeoxyribonuclease VII, large subunit [Lactobacillus reuteri
           100-23]
 gi|194453553|gb|EDX42450.1| exodeoxyribonuclease VII, large subunit [Lactobacillus reuteri
           100-23]
          Length = 445

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 142/497 (28%), Positives = 230/497 (46%), Gaps = 63/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VSEL+ +LK   + +  L  V + GE+S +R      H YFSLKD+++ IDA+++
Sbjct: 4   SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    KI+F PE+G++  V+G ++ +  + +YQI I+ + P G G+L  A E+ KKKL  
Sbjct: 62  EHQFRKIKFTPEQGMKVCVVGHVSLYEKNGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF+   K  IP  PK IAV+TS  GAVIRDI   +  R+P+ +V+++P  VQGD+   
Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I + N           D +I+ RGGGS+EDLW FN+E++ RAIANS I +IS++G
Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKISVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKIN 305
           HETD T+AD  AD RA TPT AAE+A PVK +                         +  
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDVLLTLKDDQNRLLNTMRTKINFDRQQL 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       ++D+L ++L    +  +     +   +  R+ +   +H 
Sbjct: 295 NKQLQSYIFQQPERLYENYAQKVDQLTQQLGQAAQNKMQDMRINVERLSGRLTAISPLHQ 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+  Q + + Q+ +      +                                      
Sbjct: 355 VQQQEQLVNQLQKQLVTASLANQ------------------------------------- 377

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           V+   + L S +    + RGYT +  ++   +     L     +
Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426

Query: 486 LINFFDGQANAIVINKA 502
            ++F DG+  A +    
Sbjct: 427 HLHFDDGEVQAEIKKVK 443


>gi|23099334|ref|NP_692800.1| exodeoxyribonuclease VII large subunit [Oceanobacillus iheyensis
           HTE831]
 gi|31563140|sp|Q8EQ44|EX7L_OCEIH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|22777563|dbj|BAC13835.1| exodeoxyribonuclease VII large subunit [Oceanobacillus iheyensis
           HTE831]
          Length = 455

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 148/502 (29%), Positives = 242/502 (48%), Gaps = 60/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ ++K  ++S+  L  + +RGEIS ++  HS GH Y ++KD+ +RI A+
Sbjct: 1   MKDKYLTVTALTKYVKRKMDSDPHLRDIWLRGEISNFKH-HSRGHMYLTIKDDSARIQAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++  +  K+ F PE G+  L+ G+I+ F    +YQ+ I  + P G G+L  A E+ K++L
Sbjct: 60  MFASSNRKLLFHPENGMNVLIRGEISVFEAYGQYQLYIHEMEPDGIGSLYQAFEQLKERL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            ++G F+D++K PIP  PK IAVITSPTGA IRDIL  +  R+P +++ +FPV VQG++ 
Sbjct: 120 HKQGYFADEYKKPIPRYPKNIAVITSPTGAAIRDILTTMKRRYPSVKITVFPVLVQGNQA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              IA +I Q ++L         D+II+ RGGGSIE+LW FN+E + RAI  S  PIISA
Sbjct: 180 KASIARSIQQADSL-------SYDVIIVGRGGGSIEELWSFNEEEVARAIFESKTPIISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T++D+ ADLRAPTPT A E+AVP +  L   +   + +L  ++ + I      
Sbjct: 233 VGHETDTTISDFVADLRAPTPTAAGELAVPSQVELLDKIEIQKRQLARLLKQYISQHETI 292

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+ L +        Q +      LD     L+  ++  +       NH+I R+ S     
Sbjct: 293 LHQLRQTYAFKYPHQLVKQKEQELDSTMDNLQRRMKSKVSDDKLTHNHLIKRLSSQHPQR 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++     +    + +  +  + +     ++ +                           
Sbjct: 353 ELRLAIDKL----RQLHSLQNKMMNNYLEQQSQ--------------------------- 381

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                            +      L        +KRGY    + +   I   ++L     
Sbjct: 382 ----------------RLYSQIDKLSLVNPLEIMKRGYALPYNEDGALIKSVKHLHINDT 425

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           I +   DG+    V       E
Sbjct: 426 IQLRIADGEVTGKVTAIKEANE 447


>gi|15835222|ref|NP_296981.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Nigg]
 gi|270285393|ref|ZP_06194787.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Nigg]
 gi|270289407|ref|ZP_06195709.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Weiss]
 gi|301336790|ref|ZP_07224992.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum
           MopnTet14]
 gi|14194733|sp|Q9PK65|EX7L_CHLMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|7190643|gb|AAF39436.1| exodeoxyribonuclease, large subunit [Chlamydia muridarum Nigg]
          Length = 516

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 164/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+  P   VS L+  +K+++E N   V V+GE+S    + +SGH YF++KD+ + ++   
Sbjct: 2   SITSPPVEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L  SG G LL   E+RK++L 
Sbjct: 61  FHFRSKYFDRRPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EG F  + K  IP   + I VITSPTGAVI+DIL+ +S R    +VI++PV VQG    
Sbjct: 121 AEGYFDPKRKRQIPSEARTIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGPTAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI+ AI   N         + D +I+ARGGGSIEDLW FN+E++V+AIA SSIPIISA+
Sbjct: 181 QEISRAIQVFNQ-----ENIKIDTLIVARGGGSIEDLWAFNEEILVKAIAASSIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+AAD+RAPTP+ AAE+     E     L NL   L++   + I  K N L
Sbjct: 236 GHETDFTLCDFAADVRAPTPSAAAEIVCKSSEQYHQELQNLLRHLSSHSRQFIAAKKNLL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           +   K L  +D     ++  LD     LE  L+  +    +H       +KSD LI   +
Sbjct: 296 SHWKKHLATAD-FYHTAQQTLDYTRLSLERTLDAKLEHYKQHLAQYKRWLKSDILIRVEK 354

Query: 368 K-----------NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI--- 413
                        +  +   +  + Q+     +      + +      L  Q   R+   
Sbjct: 355 HLSNLNQALESAIKNKLYSNKVSLHQLYTSRFKNELPNLQHRTQHAKHLLNQLSRRLHFV 414

Query: 414 -----FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                        +L     F++ H +             + S   KN LKRG+  + D 
Sbjct: 415 MANSQETKLQRFARLQEEFSFMIQHLLTKAKERCQSVQEQMASLNPKNVLKRGFAQLFDF 474

Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501
           N +  I    +L     + +   DG+A   V   
Sbjct: 475 NKHSVIISAESLKQSDLVRVCLQDGEAVLSVKEV 508


>gi|325569746|ref|ZP_08145770.1| exodeoxyribonuclease VII large subunit [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157051|gb|EGC69217.1| exodeoxyribonuclease VII large subunit [Enterococcus casseliflavus
           ATCC 12755]
          Length = 450

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 244/498 (48%), Gaps = 62/498 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ ++K    V+  L  V + GEIS +R   +  H YFSLKD+ ++I  +
Sbjct: 1   MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  +K+ F PEEG++ + +G+IT +  S  YQ++I+ + P G G L  A E+ K+KL
Sbjct: 59  MFKGAFDKLRFQPEEGMKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS   ++ +P  PK IAV+TSP+GAVIRDI+     R+P+ +++++P  VQG++ 
Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++   I ++            D +I+ RGGGSIEDLW FN+E + RAI ++  P+IS+
Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPVISS 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +  I+YK   
Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291

Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +         ++       +LD+L + ++  L+ +++ K RH   +I+R+       
Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRHAQQLISRLAQQQPKA 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q + Q +    Q + + +K        +    +                         
Sbjct: 352 RLQASNQEVSYLSQRLMKAMKDIYAAKENQFANAVQS----------------------- 388

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+     N   I     +  + +
Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDTIEPEDQ 423

Query: 485 ILINFFDGQANAIVINKA 502
           + I++ DGQA   VI+  
Sbjct: 424 LTIHYQDGQALVEVISTE 441


>gi|320528398|ref|ZP_08029560.1| exodeoxyribonuclease VII, large subunit [Solobacterium moorei
           F0204]
 gi|320131312|gb|EFW23880.1| exodeoxyribonuclease VII, large subunit [Solobacterium moorei
           F0204]
          Length = 469

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 137/498 (27%), Positives = 217/498 (43%), Gaps = 41/498 (8%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      VS L  +LK +++ N  L  V + GEIS  R    SGH YFSLKD+H+ +  +
Sbjct: 1   MSRRIVPVSTLVNYLKKVMDENPVLHGVMIEGEISNIRM-PYSGHWYFSLKDDHATLKCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     K+ F PE G + ++ G ++ +      Q+I  ++  SG G L    E  KKKL
Sbjct: 60  MFSSANQKLGFKPENGDKVVLKGDVSVYVVDGSMQMIATNMERSGIGQLYQQFELLKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF  ++K P+P  P  IA++T    A   D L  +  R+P+ ++  +P  VQG + 
Sbjct: 120 SDEGLFDVRYKKPLPAYPMDIALVTGNNTAAREDALITLKKRWPIAKLTEYPAPVQGMDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I  A+   +            +I+L RGGGSIEDLW FNDE + R I     PI++ 
Sbjct: 180 APKIITALQAADDGNHQ-------VIMLVRGGGSIEDLWCFNDEALARYIFQMKTPIVTG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHE D+TL D+ +D RA TPTGA E  VP  + + ++L N  +RL N +     +    
Sbjct: 233 IGHEIDFTLVDFVSDYRANTPTGAVEATVPDIQEVLATLQNSRSRLMNAMRNTFMHAKKR 292

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                    L   ++        LD L              K   F  +           
Sbjct: 293 FVYNASQPVLAKPERLYRDYITHLDYLA------------EKLIRFQEL----------- 329

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             +  R  + +K     Q++++    +    +E    L +     K  +      + +  
Sbjct: 330 -PKDKRHELNDKFHRFSQLIRERSTALHESIQEDKQRLLIY---AKQSVQSNKNLLIQYQ 385

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
           ++++  LS       T +     +L +++    L RGY+     NN  +     L     
Sbjct: 386 SQMKHTLSITADDRRTKLEKNMSLLNAYSPLLVLNRGYSVTY-KNNKVVNTTDILEIGDE 444

Query: 485 ILINFFDGQANAIVINKA 502
           I I   DG   AIV  K 
Sbjct: 445 INIRLADGTVGAIVQTKE 462


>gi|157828879|ref|YP_001495121.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|157801360|gb|ABV76613.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 457

 Score =  332 bits (851), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 178/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             E+SVSE+S  +K ++E+N  ++ V+GEISG + I +SGHAYF+LK+N + +    W+ 
Sbjct: 24  TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L  L +RK +L + G
Sbjct: 83  ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKAG 142

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    EIA
Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE 
Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY    + +  
Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           K        ++  +  LD     L   L   I                            
Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                                  ++ KI      R      I Y    +      +    
Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I F D
Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449

Query: 492 GQANAI 497
           G+   +
Sbjct: 450 GEIKVV 455


>gi|76809216|ref|YP_332496.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           1710b]
 gi|76578669|gb|ABA48144.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1710b]
          Length = 510

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 71  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 129

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 130 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 189

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 190 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 249

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 250 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 303

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 304 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 363

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 364 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 421

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +++                                                
Sbjct: 422 AFAQRLDATLQRR----------------------------------------------- 434

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
           ++     V+     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 435 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 494

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 495 ADVSLADVQP 504


>gi|257869056|ref|ZP_05648709.1| exonuclease VII [Enterococcus gallinarum EG2]
 gi|257803220|gb|EEV32042.1| exonuclease VII [Enterococcus gallinarum EG2]
          Length = 450

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 144/498 (28%), Positives = 236/498 (47%), Gaps = 62/498 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   +  H YFSLKD+ ++I  +
Sbjct: 1   MAQQYLTVTALTKYLKRKFDADPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  +K+ F PEEG++ L +G+I+ +  S  YQ+ IE + P G G L  A E+ KKKL
Sbjct: 59  MFKGAFDKLRFQPEEGMKVLAVGRISLYEASGNYQMYIEHMEPDGVGALYQAYEQLKKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS   K  +P  PK IAV+TSP+GAVIRDI+     R+P+  +++FP  VQGD+ 
Sbjct: 119 AEEGLFSAPKKI-LPRFPKRIAVLTSPSGAVIRDIITTAQRRYPIAEIVLFPTVVQGDKA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++   I ++            D +I+ RGGGSIEDLW FN+E + RAI  +  P+IS+
Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFAAETPVISS 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   + RL    +  I+ K   
Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEEKQTRLEQAFMYQIQRKQER 291

Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                        ++       +LD+L + +  +L+  ++ K +  + +I+R++      
Sbjct: 292 FQRAVGSYIFRQPERLYEAQAIKLDQLQQRMNQSLQTQLYDKEKVASQLIHRLEQQLPKA 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +    Q +    Q +E+ ++  +                                    
Sbjct: 352 RLSAAGQEVTYLTQRLEKAIQLSVEKKEQ------------------------------- 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                 + L   +    + RGY+     +   +    ++     
Sbjct: 381 ----------------RFLSALQSLDLLSPLKIMGRGYSFTT-KDEQVVKTIADIEAGDE 423

Query: 485 ILINFFDGQANAIVINKA 502
           + +++ DGQA   VI   
Sbjct: 424 LNVHYQDGQALVKVIATE 441


>gi|306841706|ref|ZP_07474393.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO2]
 gi|306288236|gb|EFM59620.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO2]
          Length = 437

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 169/423 (39%), Positives = 255/423 (60%), Gaps = 2/423 (0%)

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++ F PEEG+E +  GK+TT+PGSSKYQI+IE + P+G+G L+  LE+RK++L  EGLF 
Sbjct: 3   RLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLAAEGLFD 62

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
              K  +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+VQGD C  E+A A+
Sbjct: 63  PALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRVQGDTCGPEVAMAV 122

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N L +    PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+GHETDWT
Sbjct: 123 NGFNALPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVGHETDWT 182

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D AAD+RAPTPTGAAEMAVPVK  LQ++L +  ARL++ + R    K     +  +A+
Sbjct: 183 LIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSTMSRFFDQKRQAHRAAARAM 242

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
           P++DQ L+  R R D     L   L +   +K  HF+    ++    L   + +  + + 
Sbjct: 243 PSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRLLQRRLVELERGVT 302

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q + + ++  LR        +   L    E    R     + +++L  R +  +   
Sbjct: 303 MLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLEQLDRRRDQAVRLL 360

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
           I+          R++++ +Y++ L+RG+  + D     + Q   ++    + + F DG  
Sbjct: 361 IERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSPGDALSVRFRDGDV 420

Query: 495 NAI 497
             +
Sbjct: 421 GVV 423


>gi|108758486|ref|YP_632813.1| exodeoxyribonuclease VII large subunit [Myxococcus xanthus DK 1622]
 gi|108462366|gb|ABF87551.1| exodeoxyribonuclease VII, large subunit [Myxococcus xanthus DK
           1622]
          Length = 500

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 137/505 (27%), Positives = 233/505 (46%), Gaps = 23/505 (4%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV EL+  LK  +ES  + V VRGE++G+RG ++ GH YFSLKD  + ID  +W    
Sbjct: 2   VLSVGELTRQLKQTLESRFARVIVRGEVTGFRGPNARGHWYFSLKDAGAAIDTKVWASMA 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F   +G+E +  G +  +    +Y +I++ L P G G L  A E+ K++L +EGL 
Sbjct: 62  ARLRFALRDGMEVIAEGSVDLYEPQGRYSLIVQRLEPVGEGALALAFEQLKERLAQEGLI 121

Query: 134 SDQH---KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKE 189
                    P+P++P+ I V+TS TGA ++D L+ +  R P + V++   +VQG+    E
Sbjct: 122 GPGRVRPPRPLPYLPRRIGVVTSRTGAALQDFLRVLHSRNPRQSVLVADARVQGEGSAVE 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A AI +L            D+I++ RGGGS+EDLW FN+E + RAI  S +P++SAIGH
Sbjct: 182 VARAIERLAR-------TDVDVIVVTRGGGSVEDLWTFNEERVARAIFASPVPVVSAIGH 234

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T++D+ ADLRAPTP+ AAE   PV   L+ +L     RL   + R +         
Sbjct: 235 EIDFTISDFVADLRAPTPSAAAERLAPVLADLELTLATQAGRLRRAMERRVLELREEQGQ 294

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L   L +  + ++  R  L      +   L   +         +  R++       + + 
Sbjct: 295 LASRLEDPRRAINHQRLHLSEQVESMMRVLRPAVRGHREELRSLTERLQRARPQARLGEQ 354

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R H+L+    + + V+  +           A L + R     ++      +     R+  
Sbjct: 355 RAHLLKLAMRLSEAVRAGV--ATRHGALATARLGLERASPAAQVSRERARLAAHRARLLA 412

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILIN 488
           +    +             L + +    + RGY+ +    +   +    ++    R+ + 
Sbjct: 413 LQQGALADAQKRFQRLEGRLDAMSPLKVMSRGYSVVFRQRDGAVVRTGADVQVGERLGLK 472

Query: 489 FF-DG--------QANAIVINKAPP 504
              +G        +  A V     P
Sbjct: 473 LASNGAKSLGGCEEIEATVTAVKGP 497


>gi|42519421|ref|NP_965351.1| exonuclease VII large subunit [Lactobacillus johnsonii NCC 533]
 gi|81832191|sp|Q74IM1|EX7L_LACJO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|41583709|gb|AAS09317.1| exonuclease VII large subunit [Lactobacillus johnsonii NCC 533]
          Length = 456

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 143/500 (28%), Positives = 236/500 (47%), Gaps = 58/500 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SVS+L++++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ ++
Sbjct: 4   NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++KL 
Sbjct: 63  FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF+++HK  IP  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE  
Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS++
Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   +   I  K   L
Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHTKHQIL 297

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L     L    +       ++D L   L   ++  +         +  R+K+      
Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLIHRLNQAMDNRLQHDGSTLRLLQERLKALSPSRK 357

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++                                               L      +++
Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +   +++ +K     ++   + L   +   T+ RGY    D   N +T    L    ++
Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNIVTSVDQLKIDEKL 430

Query: 486 LINFFDGQANAIVINKAPPK 505
            ++F DGQ    V N    K
Sbjct: 431 KLHFKDGQVQVNVENIRREK 450


>gi|56478314|ref|YP_159903.1| exodeoxyribonuclease VII, large subunit [Aromatoleum aromaticum
           EbN1]
 gi|56314357|emb|CAI09002.1| exodeoxyribonuclease vII, large subunit [Aromatoleum aromaticum
           EbN1]
          Length = 458

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 125/491 (25%), Positives = 205/491 (41%), Gaps = 54/491 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV+EL+   +  +ES    + V GE+S       SGH YF+LKD  +++   +W+   
Sbjct: 21  VLSVAELNRLARQTLESRFPLLWVGGELSNLTRAP-SGHLYFTLKDAQAQVRCTMWRNRA 79

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G+       +T +     +Q+ IE+L  +G G L     + K +L  EGLF
Sbjct: 80  QLLPFRPENGMRVEARALVTLYEVRGDFQLGIEALRQAGVGNLFETFVRLKDRLAGEGLF 139

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P  P+ + V+TSP  A   D+L  +  R P L V+++P  VQG+     +A 
Sbjct: 140 DAALKRALPRYPRRLGVVTSPAAAAWHDVLATLRRRAPHLEVVLYPAPVQGEAARTRLA- 198

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
               +            D+++L RGGG IEDLW FNDE + RAI    +P++S IGHETD
Sbjct: 199 --EAVRVASARAATDGIDLLLLVRGGGGIEDLWAFNDENLARAIRACPVPVVSGIGHETD 256

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+AADLRA TPTGAAE+A        + L +L   L+  +   +      L+    
Sbjct: 257 FTIADFAADLRAATPTGAAELASAGYHEACARLTSLGRTLSAALHYRLDTLAQRLDRAAL 316

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  + L+ +  R  RL   L   +   + R +     +            ++  R  
Sbjct: 317 RLVHPRERLAVAHERTARLGVRLAAAMSRRLERLHARNEQLC---------LRLEARRPD 367

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           I  + +   ++                                    +     R+     
Sbjct: 368 IDREAERCARLA---------------------------------NRLVLAADRL----- 389

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             I      +      LQ  A    L RGY+  +D   + +     + +  ++ +    G
Sbjct: 390 --IDRQSARLEGLAAHLQHLAPHAVLARGYSITRDAQGHILRTSAGVGSGEKVSVELATG 447

Query: 493 QANAIVINKAP 503
           + +A V +   
Sbjct: 448 RLHATVNSTDA 458


>gi|300310499|ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herbaspirillum seropedicae
           SmR1]
 gi|300073284|gb|ADJ62683.1| exodeoxyribonuclease VII, large subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 438

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/490 (28%), Positives = 231/490 (47%), Gaps = 57/490 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            +VS L+  +  ++E N   + V+GE+S +    +SGH YF+LKD  +++ A+++KG   
Sbjct: 2   LTVSALNQAVGRMLERNFPLLWVKGEVSNFT-RAASGHWYFNLKDEGAQVRAVMFKGRAQ 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
              F+P EG +  V   +T +     YQ+ +E++  SG G L  A  + K++L  EGLF+
Sbjct: 61  YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFLQLKERLEREGLFA 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K  +P  P+ I ++TSP  A +RD+L  +  R P + V+++P  VQG+   + IA A
Sbjct: 121 RERKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVVLYPTPVQGEGAGQRIAAA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I + +   E       D++++ RGGGSIEDLW FN+E++ RAI  +++P+IS +GHETD+
Sbjct: 181 IGRASERAE------CDVLLVCRGGGSIEDLWSFNEEVVARAIVAATMPVISGVGHETDF 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+AD+AADLRAPTPT AAE+A   ++   + L    A L   + R +  K  +++ L + 
Sbjct: 235 TIADFAADLRAPTPTAAAELAASSRQDWLAELRGHAADLTRALRRTLADKAQSVDWLSRR 294

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +    +   R +L  L   L H  +I + R       + +R+            R+ +
Sbjct: 295 LVSPSAYIQHERVKLLALQNRLSHANQIPLTRMRHGLQQLASRLAHQLPDTR--HARRDL 352

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E  + +++                 + L +L  Q                         
Sbjct: 353 AELARRLQRAQGAQQSAQRQTLTTLHSQLELLNPQ------------------------- 387

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                        R L+         RGY  + D     +     LA ++ I I    G 
Sbjct: 388 -------------RTLE---------RGYAIVSDHQGRVLHSPAELAARSEITIRLAQGS 425

Query: 494 ANAIVINKAP 503
           A   + +  P
Sbjct: 426 AEVGIASVQP 435


>gi|329725466|gb|EGG61949.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           VCU144]
          Length = 445

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 153/492 (31%), Positives = 238/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE  KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+ I N   PIISA+GHET
Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  I + I+++   LN + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L R+L H L   + +   H   +        L   I + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q I +    + +I+  +                                    IT ++ 
Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L +K++S           L + +  NT+ RGY  + + +N  +T    L    +I +  
Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGSVDATVKKV 440


>gi|242242792|ref|ZP_04797237.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           W23144]
 gi|242233928|gb|EES36240.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           W23144]
          Length = 445

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 151/492 (30%), Positives = 240/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQIDGIGNLYQKLEQLKKKLKKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+AI N   PIISA+GHET
Sbjct: 184 KKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKAIFNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  I + I+++   LN + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L R+L   L   + +   H   +        L   I + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNLLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q + +    + +I+  +                                    IT ++ 
Sbjct: 357 KQSVYQLHSRLSKIMSNN------------------------------------ITNLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L +K+++           L + +  NT+ RGY  + + ++  IT    L    +I +  
Sbjct: 381 VLKNKLEN-----------LNNLSPTNTMLRGYAIV-NKDDEVITSTHKLNENDKISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A+V   
Sbjct: 429 KDGSVDAMVKKV 440


>gi|62184936|ref|YP_219721.1| exodeoxyribonuclease VII large subunit [Chlamydophila abortus
           S26/3]
 gi|81312892|sp|Q5L6H1|EX7L_CHLAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|62148003|emb|CAH63754.1| probable exodeoxyribonuclease VII large subunit [Chlamydophila
           abortus S26/3]
          Length = 555

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 166/555 (29%), Positives = 261/555 (47%), Gaps = 69/555 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   P  +V+ L+  +K+++ESN  H+ V+GE+S       SGH YF +KD+ S ++   
Sbjct: 2   ATSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDSKSFLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L+ +G G LL   E+ KK+L 
Sbjct: 61  FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EG FS + K P+P IPK I VITSPTGAVI+DIL+ +S R +  +V+I+PV VQG    
Sbjct: 121 AEGYFSIEKKQPLPRIPKCIGVITSPTGAVIQDILRILSRRCYQYKVLIYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           KEI+ AI  +N           D++++ARGGGSIEDLW FN+E+IV+AI  S+IPIISA+
Sbjct: 181 KEISQAIEVMNR------DKLVDVLVIARGGGSIEDLWAFNEEIIVKAIDASTIPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+AAD+RAPTP+ A E+     +       +    LN    +L+  K   +
Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAGEIVCQSSQEQIQIFKSHLRYLNAHAQQLLAGKAKQI 294

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363
               + L + D         LD L   +E +++  + +  + +      ++SD L     
Sbjct: 295 QQWKRYLDHVD-FFRPPHQSLDYLRVSIERSIQTTLSQSKQRYRQYTRWLQSDILQRMTY 353

Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
                                            HN Q+ RQ     +  I + + Q L Y
Sbjct: 354 RLQDLWKMINLAFQNRLLALKHHCVHIKKNLVIHNTQQYRQRFDPCRDQIHRALSQRLGY 413

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------------------- 430
                  K  +L     +         + +  L  R+                       
Sbjct: 414 FQQSLAHKQTLLKHFTTKINQLFIKETSALNLLKKRLNKAFVYTVCERREHFLYAKENLF 473

Query: 431 --LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487
             L+H ++         ++ L S   KN LKRGY  + D N N+ I   ++L   + + +
Sbjct: 474 LSLNHLVERHRAKYHTVSQQLISLNPKNVLKRGYAMLFDFNENSAIISAKSLHKHSCVRV 533

Query: 488 NFFDGQANAIVINKA 502
              DG+A   V +  
Sbjct: 534 RLQDGEATLTVTDVQ 548


>gi|21231741|ref|NP_637658.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768133|ref|YP_242895.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|23821538|sp|Q8P8D9|EX7L_XANCP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81305890|sp|Q4UVP8|EX7L_XANC8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|21113446|gb|AAM41582.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573465|gb|AAY48875.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 446

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 134/493 (27%), Positives = 225/493 (45%), Gaps = 60/493 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
                + S+L+   + ++E +   V V  E+       +SGH YF+LKD  ++I   ++K
Sbjct: 5   TEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVT-RPASGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A E+ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G+F  + K P+P   + +AVITSP+GA +RD+L  ++ RFP L V I P  VQGD    +
Sbjct: 124 GVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD +L+D+AAD+RAPTP+ AAE+ VP +  L + +   +ARL+ +    +   +   + 
Sbjct: 238 ETDVSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQLQQHTLGQAMQHADR 297

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L   + R +   R L   ++ I+ R           ++S        
Sbjct: 298 LALRLRARSPQARLQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +     Q                                    +  R+
Sbjct: 355 ----HLAPLQQRLRAAHPQ----------------------------------AAMQRRL 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486
           +          H  +    R L++ +   T+ RGY  + +  + + +     L    R+ 
Sbjct: 377 Q--------QDHLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVVRSAAELTQGDRLR 428

Query: 487 INFFDGQANAIVI 499
               DG    +V 
Sbjct: 429 AQLADGSVTVVVD 441


>gi|227890286|ref|ZP_04008091.1| exonuclease VII large subunit [Lactobacillus johnsonii ATCC 33200]
 gi|227849100|gb|EEJ59186.1| exonuclease VII large subunit [Lactobacillus johnsonii ATCC 33200]
          Length = 453

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 143/500 (28%), Positives = 236/500 (47%), Gaps = 58/500 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SVS+L++++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ ++
Sbjct: 4   NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++KL 
Sbjct: 63  FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF+++HK  IP  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE  
Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS++
Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   +   I  K   L
Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHTKRQIL 297

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L     L    +       ++D L   L   ++  +         +   +K+      
Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMDNRLQHDGSTLRLLQEHLKALNPSRK 357

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++                                               L      +++
Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +   +++ +K     ++   + L   +   T+ RGY    D   N +T    L    ++
Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVGQLKIDEKL 430

Query: 486 LINFFDGQANAIVINKAPPK 505
            ++F DGQA   V N    K
Sbjct: 431 KLHFKDGQAQVNVENIRREK 450


>gi|94309483|ref|YP_582693.1| exodeoxyribonuclease VII large subunit [Cupriavidus metallidurans
           CH34]
 gi|93353335|gb|ABF07424.1| exonuclease VII, large subunit [Cupriavidus metallidurans CH34]
          Length = 481

 Score =  330 bits (847), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 136/501 (27%), Positives = 231/501 (46%), Gaps = 57/501 (11%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           SQ  +       VSEL++ +  ++E +     VRGEIS +    +SGH YFSLKD  ++I
Sbjct: 33  SQPPTRTRDVIQVSELNHAIAGVLERSFPLAWVRGEISNFT-RAASGHWYFSLKDARAQI 91

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
             ++++G    ++F P EG    V   ++ +    + Q+ +E++  +G G L  A  + K
Sbjct: 92  RCVMFRGRNQHVDFSPREGEAVEVRALVSMYEARGELQLGVEAMRRAGLGNLYEAFLRLK 151

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQG 183
           +KL + GLF  + K PIP  P++I V+TS   A +RD+L  +  R   + VI++PV VQG
Sbjct: 152 EKLAQAGLFDTERKRPIPDHPRVIGVVTSLQAAAMRDVLTTLQRRAPHVPVIVYPVPVQG 211

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               ++IA  +   +  +E       D++IL RGGGSIEDLW FN+E++  AIA  ++P+
Sbjct: 212 AGAAEKIAAMLDTASARRE------CDVLILCRGGGSIEDLWSFNEEVVAHAIARCAVPV 265

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +S +GHETD+T+AD+ AD+RAPTPTGAAE+  P + HL  +       L   + R ++ +
Sbjct: 266 VSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRAHLLQATRRARDALAQAMDRQLERR 325

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L  L + L +    L   R ++D L R +   L   +  +    + +  R ++    
Sbjct: 326 AQHLEWLGRRLRSPQAQLQERRAQVDNLARHMRSALRDTVAVQRHRVDVLAMRWRACKP- 384

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                                                            I      + +L
Sbjct: 385 ------------------------------------------------DIGAAQAELGRL 396

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R+    + + +     ++  +  L+  A + TL+RGY  + D     +     L   +
Sbjct: 397 AARMAAAAARRHERETARLARASGALELLAPQRTLERGYAVLLDNRGRALRSPVELRAGS 456

Query: 484 RILINFFDGQANAIVINKAPP 504
            +  +  DG A+  +      
Sbjct: 457 IVEAHLADGVADIEIAGVQAK 477


>gi|297207757|ref|ZP_06924192.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|296887774|gb|EFH26672.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLISVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|78048163|ref|YP_364338.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123757456|sp|Q3BSC5|EX7L_XANC5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|78036593|emb|CAJ24284.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 127/496 (25%), Positives = 223/496 (44%), Gaps = 60/496 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      +SGH YF+LKD  ++I   ++K
Sbjct: 5   NDQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R     R+L   +  ++ R          ++++        
Sbjct: 298 LALRLRAQSPQARLQLLHRRQQDAGRQLRARMMQVLERLQARVQQGQAQLQAHNPQRQ-- 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                +   QQ +  +  Q                                    +  R+
Sbjct: 356 -----LAGLQQRLRALHPQ----------------------------------AAMQRRL 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +             +    R L++ +   T+ RGY  +    + + +     + T  R+ 
Sbjct: 377 QH--------DQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRSAAEVVTGERLR 428

Query: 487 INFFDGQANAIVINKA 502
               DG     V +  
Sbjct: 429 AQLADGSIQVRVESGE 444


>gi|57867013|ref|YP_188661.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           RP62A]
 gi|293366520|ref|ZP_06613197.1| exodeoxyribonuclease VII [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|81819389|sp|Q5HP29|EX7L_STAEQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|57637671|gb|AAW54459.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           RP62A]
 gi|291319289|gb|EFE59658.1| exodeoxyribonuclease VII [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735353|gb|EGG71645.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           VCU045]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 152/492 (30%), Positives = 237/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I  +++KG 
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISGMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE  KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+ I N   PIISA+GHET
Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  I + I+++   LN + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L R+L H L   + +   H   +        L   I + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q I +    + +I+  +                                    IT ++ 
Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L +K++S           L + +  NT+ RGY  + + +N  +T    L    +I +  
Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGSVDATVKKV 440


>gi|329667054|gb|AEB93002.1| exonuclease VII large subunit [Lactobacillus johnsonii DPC 6026]
          Length = 456

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 145/500 (29%), Positives = 236/500 (47%), Gaps = 58/500 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SVS+L++++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ ++
Sbjct: 4   NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++KL 
Sbjct: 63  FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF+++HK  IP  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE  
Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS++
Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   I   I  K   L
Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLADVLTQIVQLRARLYAAIQANIHTKHQIL 297

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L     L    +       ++D L   L   +E  +         +  R+K+      
Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAIENRLQHDGSTLRLLQERLKALSPSRK 357

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++                                               L      +++
Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +   +++ +K     ++   + L   +   T+ RGY    D   N +T    L    ++
Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVDQLKIDEKL 430

Query: 486 LINFFDGQANAIVINKAPPK 505
            ++F DGQ    V N    K
Sbjct: 431 KLHFKDGQVQVNVENIRREK 450


>gi|82751128|ref|YP_416869.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           RF122]
 gi|123549248|sp|Q2YYB8|EX7L_STAAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|82656659|emb|CAI81085.1| probable exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus RF122]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHIEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|15924513|ref|NP_372047.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15927104|ref|NP_374637.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus N315]
 gi|21283205|ref|NP_646293.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49483773|ref|YP_040997.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49486360|ref|YP_043581.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57650480|ref|YP_186409.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160641|ref|YP_494168.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88195330|ref|YP_500134.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|151221640|ref|YP_001332462.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156979842|ref|YP_001442101.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|161509752|ref|YP_001575411.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140056|ref|ZP_03564549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|253314893|ref|ZP_04838106.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253732177|ref|ZP_04866342.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253733227|ref|ZP_04867392.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255006310|ref|ZP_05144911.2| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257425649|ref|ZP_05602073.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257428310|ref|ZP_05604708.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257430947|ref|ZP_05607327.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257433636|ref|ZP_05609994.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436549|ref|ZP_05612593.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M876]
 gi|258411100|ref|ZP_05681380.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A9763]
 gi|258437356|ref|ZP_05689340.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A9299]
 gi|258443562|ref|ZP_05691901.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A8115]
 gi|258446769|ref|ZP_05694923.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A6300]
 gi|258448683|ref|ZP_05696795.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A6224]
 gi|258451181|ref|ZP_05699216.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A5948]
 gi|258453500|ref|ZP_05701478.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A5937]
 gi|262049109|ref|ZP_06021986.1| hypothetical protein SAD30_0266 [Staphylococcus aureus D30]
 gi|262051190|ref|ZP_06023414.1| hypothetical protein SA930_1621 [Staphylococcus aureus 930918-3]
 gi|269203153|ref|YP_003282422.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893025|ref|ZP_06301259.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A8117]
 gi|282904106|ref|ZP_06311994.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C160]
 gi|282905933|ref|ZP_06313788.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908843|ref|ZP_06316661.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282914331|ref|ZP_06322117.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M899]
 gi|282919300|ref|ZP_06327035.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C427]
 gi|282924625|ref|ZP_06332293.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C101]
 gi|282924772|ref|ZP_06332439.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9765]
 gi|282928995|ref|ZP_06336582.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A10102]
 gi|283958288|ref|ZP_06375739.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|284024583|ref|ZP_06378981.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus 132]
 gi|293503406|ref|ZP_06667253.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510422|ref|ZP_06669128.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M809]
 gi|293530962|ref|ZP_06671644.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M1015]
 gi|294848554|ref|ZP_06789300.1| exodeoxyribonuclease VII [Staphylococcus aureus A9754]
 gi|295428102|ref|ZP_06820734.1| exodeoxyribonuclease VII [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275120|ref|ZP_06857627.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297590932|ref|ZP_06949570.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300911838|ref|ZP_07129281.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304380888|ref|ZP_07363548.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|54037076|sp|P67450|EX7L_STAAN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|54037077|sp|P67451|EX7L_STAAW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|54041042|sp|P67449|EX7L_STAAM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|73919344|sp|Q5HFP8|EX7L_STAAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|73919345|sp|Q6GGH5|EX7L_STAAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|73919346|sp|Q6G942|EX7L_STAAS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122539437|sp|Q2FY46|EX7L_STAA8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|123485721|sp|Q2FGL0|EX7L_STAA3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|166232368|sp|A7X2Q2|EX7L_STAA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|172048898|sp|A6QH68|EX7L_STAAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|189037815|sp|A8Z463|EX7L_STAAT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|13701322|dbj|BAB42616.1| SA1354 [Staphylococcus aureus subsp. aureus N315]
 gi|14247294|dbj|BAB57685.1| probable exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21204645|dbj|BAB95341.1| MW1476 [Staphylococcus aureus subsp. aureus MW2]
 gi|49241902|emb|CAG40596.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49244803|emb|CAG43252.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57284666|gb|AAW36760.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus COL]
 gi|87126615|gb|ABD21129.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202888|gb|ABD30698.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374440|dbj|BAF67700.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156721977|dbj|BAF78394.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368561|gb|ABX29532.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253723966|gb|EES92695.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253728767|gb|EES97496.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257271343|gb|EEV03489.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257275151|gb|EEV06638.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257278377|gb|EEV09013.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257281729|gb|EEV11866.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257283900|gb|EEV14023.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M876]
 gi|257840250|gb|EEV64714.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A9763]
 gi|257848561|gb|EEV72549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A9299]
 gi|257850968|gb|EEV74911.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A8115]
 gi|257854344|gb|EEV77293.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A6300]
 gi|257857961|gb|EEV80850.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A6224]
 gi|257861236|gb|EEV84049.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A5948]
 gi|257864231|gb|EEV86981.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           A5937]
 gi|259160827|gb|EEW45847.1| hypothetical protein SA930_1621 [Staphylococcus aureus 930918-3]
 gi|259162778|gb|EEW47343.1| hypothetical protein SAD30_0266 [Staphylococcus aureus D30]
 gi|262075443|gb|ACY11416.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269941014|emb|CBI49398.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282313460|gb|EFB43855.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C101]
 gi|282317110|gb|EFB47484.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C427]
 gi|282321512|gb|EFB51837.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M899]
 gi|282327107|gb|EFB57402.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282331225|gb|EFB60739.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282589402|gb|EFB94493.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A10102]
 gi|282592779|gb|EFB97785.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9765]
 gi|282595724|gb|EFC00688.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus C160]
 gi|282764343|gb|EFC04469.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A8117]
 gi|283790437|gb|EFC29254.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|285817206|gb|ADC37693.1| Exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           04-02981]
 gi|290920230|gb|EFD97296.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095072|gb|EFE25337.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466786|gb|EFF09306.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus M809]
 gi|294824580|gb|EFG41003.1| exodeoxyribonuclease VII [Staphylococcus aureus A9754]
 gi|295128460|gb|EFG58094.1| exodeoxyribonuclease VII [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575818|gb|EFH94534.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298694806|gb|ADI98028.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300886084|gb|EFK81286.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302751355|gb|ADL65532.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304340615|gb|EFM06549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312829913|emb|CBX34755.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315195425|gb|EFU25812.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315198782|gb|EFU29110.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140591|gb|EFW32445.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320144128|gb|EFW35897.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|323443195|gb|EGB00813.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus O46]
 gi|329314201|gb|AEB88614.1| Exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329728441|gb|EGG64878.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329730838|gb|EGG67216.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|329942663|ref|ZP_08291442.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci
           Cal10]
 gi|332287258|ref|YP_004422159.1| exodeoxyribonuclease VII large subunit [Chlamydophila psittaci 6BC]
 gi|313847844|emb|CBY16838.1| probable exodeoxyribonuclease VII large subunit [Chlamydophila
           psittaci RD1]
 gi|325506549|gb|ADZ18187.1| exodeoxyribonuclease VII large subunit [Chlamydophila psittaci 6BC]
 gi|328814923|gb|EGF84912.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci
           Cal10]
 gi|328914504|gb|AEB55337.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci
           6BC]
          Length = 555

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 167/555 (30%), Positives = 262/555 (47%), Gaps = 69/555 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   P  +V+ L+  +K+++ESN  H+ V+GE+S       SGH YF +KD+ S ++   
Sbjct: 2   ATSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDSKSFLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L+ +G G LL   E+ KK+L 
Sbjct: 61  FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EG FS + K P+P IPK I VITSPTGAVI+DIL+ +S R +  +V+I+PV VQG    
Sbjct: 121 AEGYFSIEKKQPLPRIPKCIGVITSPTGAVIQDILRILSRRCYQYKVLIYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           KEI+ AI  +N           D++++ARGGGSIEDLW FN+E+IV+AI  S+IPIISA+
Sbjct: 181 KEISQAIEVMNR------DKLVDVLVIARGGGSIEDLWAFNEEIIVKAIDASTIPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+AAD+RAPTP+ AAE+     +       +    LN    +L+  K   +
Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSQEQIQIFKSHLRYLNAHAQQLLAGKAKQI 294

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363
               + L + D         LD L   +E +++  + +  + +      ++SD L     
Sbjct: 295 QQWKRYLDHVD-FFRPPHQSLDYLRVSIERSIQTKLSQSKQRYMQYTRWLQSDILQRMTY 353

Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
                                            HN Q+ RQ     +  I + + Q L Y
Sbjct: 354 RLQDLWKMINLAFQNRLLALKHHCVHIKKNLVIHNTQQYRQRFDPCRDQIHRALSQRLGY 413

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------------------- 430
                  K  +L     +         + +  L  R+                       
Sbjct: 414 FQQSLAHKQTLLKHFTTKINQLFIKETSALNLLKRRLNKAFVYTVCERREHFLYAKENLF 473

Query: 431 --LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487
             L+H ++         ++ L S   KN LKRGY  + D N N+ I   ++L   + + +
Sbjct: 474 LSLNHLVERHRAKYHTVSKQLISLNPKNVLKRGYAMLFDFNENSAIISAKSLHKHSCVRV 533

Query: 488 NFFDGQANAIVINKA 502
              DG+A   V +  
Sbjct: 534 RLQDGEATLTVTDVQ 548


>gi|238021484|ref|ZP_04601910.1| hypothetical protein GCWU000324_01384 [Kingella oralis ATCC 51147]
 gi|237868464|gb|EEP69470.1| hypothetical protein GCWU000324_01384 [Kingella oralis ATCC 51147]
          Length = 469

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 124/516 (24%), Positives = 222/516 (43%), Gaps = 78/516 (15%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+     ++      V V GE+S      +SGH YF LKD+ +++   ++K    
Sbjct: 30  LSVSELNSIADELLGQQFLGVWVAGEVSNLT-RAASGHYYFLLKDDLAQVRCTLFKFAAA 88

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++     EG    V GKI  +    ++QI +  +   G G L    E+ KKKL  EGLF+
Sbjct: 89  RLAQPLREGEHIEVCGKIGIYAARGEFQINVNEVRQVGVGQLFERYERLKKKLDAEGLFA 148

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K  +P  P+ I V+TS   A +RD++  +  R P + ++++P  VQG    ++IA A
Sbjct: 149 PERKQRLPENPQRIGVVTSLAAAALRDVVSTLRRRAPHIALVVYPTPVQGAGSEQQIAQA 208

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   +   E       D++I+ RGGGS+EDLW FN+E + RAIA+ ++P++S +GHETD+
Sbjct: 209 IRAADERAE------VDVLIVCRGGGSLEDLWAFNEEAVARAIADCALPVVSGVGHETDF 262

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL D+ AD+RAPTPTGAAE+  P +  L   L N +AR    + +  +     ++ L K 
Sbjct: 263 TLVDFVADVRAPTPTGAAELVSPNRAELLHKLANYQARFQAALQQRYQNAAQQMDFLAKQ 322

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  Q     R ++ +   +L   +   +  +          ++              +
Sbjct: 323 LQHPRQKWQTQRAQVAQWHAQLTWAMGQQLGGQRHRLTQAAQALRGQQPDVA------RL 376

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            ++ +  +  +    +                                            
Sbjct: 377 QQRVERFQAALSFGWQ-------------------------------------------T 393

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           + ++    ++    +L + +    L+RG+  + +     +    +L     + ++F  G 
Sbjct: 394 RFQAASARLAKQADVLAAMSPHAVLERGFAIVHNARGQVVRDADSLKQGQTLHVSFAHGA 453

Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           ++  V++                        QG+LF
Sbjct: 454 SDVQVLSLQ---------------------KQGDLF 468


>gi|258423177|ref|ZP_05686070.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9635]
 gi|257846627|gb|EEV70648.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9635]
          Length = 445

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 233/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F + +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDNANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|253996076|ref|YP_003048140.1| exodeoxyribonuclease VII large subunit [Methylotenera mobilis JLW8]
 gi|253982755|gb|ACT47613.1| exodeoxyribonuclease VII, large subunit [Methylotenera mobilis
           JLW8]
          Length = 409

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 130/378 (34%), Positives = 209/378 (55%), Gaps = 8/378 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            SQ+ + +    SVSEL+   K+I+E +     V GE+S +    +SGH YFSLKD  ++
Sbjct: 8   LSQEAATNAKVLSVSELNRMAKNILEQSFPLFWVSGEVSNFT-RAASGHWYFSLKDAGAQ 66

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +  +++KG  + ++F P EG +      +T +     +Q+ +E +  +G G L  A EK 
Sbjct: 67  VRCVMFKGRNSYVDFTPREGDKIEARATVTLYEARGDFQLTVEFVQRAGLGALFEAFEKL 126

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+KL  EGLF    K  IP  PK I V+TS   A +RD+L  +  R P + +II+P  VQ
Sbjct: 127 KRKLSNEGLFDASTKRAIPKHPKQIGVVTSADAAALRDVLTTLKRRMPNIPIIIYPTPVQ 186

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    + IANAI   +   E       D++I+ RGGGSIEDLW FN+E++ RAIA+ +IP
Sbjct: 187 GKGVAQLIANAINTAHERAE------CDVLIICRGGGSIEDLWQFNEEVVARAIAHCNIP 240

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
            IS +GHETD+T+ D+ AD+RA TPT AAE+A P +E + +    L+ RL   +  ++ +
Sbjct: 241 TISGVGHETDFTICDFVADIRAATPTAAAELATPSREDMLNKSNQLKLRLAKDMQFVLNH 300

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           K   L+ L + L +  Q ++  + ++ +L   L H+    + RK ++   +   ++    
Sbjct: 301 KSQALDYLARRLISPSQQIAQQKTQVTQLAYRLNHSTNQQLQRKQQNLLRLNQNLQHLNP 360

Query: 363 IHNIQKNRQHILEKQQHI 380
              + +    +  K  +I
Sbjct: 361 QAVLTRGYAFVQNKSGNI 378



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 54/134 (40%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           +R+ +L K   ++  + + ++++   K + +  L         +I    T + +L  R+ 
Sbjct: 275 SREDMLNKSNQLKLRLAKDMQFVLNHKSQALDYLARRLISPSQQIAQQKTQVTQLAYRLN 334

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              + +++    ++    + LQ    +  L RGY  +Q+ + N I     L     + + 
Sbjct: 335 HSTNQQLQRKQQNLLRLNQNLQHLNPQAVLTRGYAFVQNKSGNIINTSSQLLNGDEVTLT 394

Query: 489 FFDGQANAIVINKA 502
           F  G A A +    
Sbjct: 395 FGAGSAEANITKIK 408


>gi|257865768|ref|ZP_05645421.1| exonuclease VII [Enterococcus casseliflavus EC30]
 gi|257872103|ref|ZP_05651756.1| exonuclease VII [Enterococcus casseliflavus EC10]
 gi|257799702|gb|EEV28754.1| exonuclease VII [Enterococcus casseliflavus EC30]
 gi|257806267|gb|EEV35089.1| exonuclease VII [Enterococcus casseliflavus EC10]
          Length = 450

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 244/498 (48%), Gaps = 62/498 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ ++K    V+  L  V + GEIS +R   +  H YFSLKD+ ++I  +
Sbjct: 1   MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  +K+ F PEEG++ + +G+IT +  S  YQ++I+ + P G G L  A E+ K+KL
Sbjct: 59  MFKGAFDKLRFQPEEGMKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS   ++ +P  PK IAV+TSP+GAVIRDI+     R+P+ +++++P  VQG++ 
Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++   I ++            D +I+ RGGGSIEDLW FN+E + RAI ++  PIIS+
Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPIISS 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +  I+YK   
Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291

Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +         ++       +LD+L + ++  L+ +++ K R    +I+R+       
Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRQAQQLISRLAQQQPKA 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q + Q +    Q + + +K        +    +                         
Sbjct: 352 RLQASNQEVSYLSQRLTKAMKDIYAAKENQFANAVQS----------------------- 388

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+     N   I     +  + +
Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDAIEPEDQ 423

Query: 485 ILINFFDGQANAIVINKA 502
           ++I++ DGQA   VI+  
Sbjct: 424 LMIHYQDGQALVEVISTE 441


>gi|302333200|gb|ADL23393.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
          Length = 445

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 147/492 (29%), Positives = 231/492 (46%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+  +    + ++                                           +  
Sbjct: 357 QQNNFQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|134296729|ref|YP_001120464.1| exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis
           G4]
 gi|134139886|gb|ABO55629.1| Exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis
           G4]
          Length = 460

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 132/490 (26%), Positives = 231/490 (47%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWIAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P L VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPVHPRAIGIVTSLQAAALRDVLTTLARRAPHLPVIVYPAPVQGAGAAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+A P +  L   L   +  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELSERQRALARCVARGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  +D+L   L       +                        + R  + 
Sbjct: 314 VSPAERLQRQRVHVDQLAARLASAASRPV---------------------RDARARFALA 352

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           + +    +      R++     +++A+    R                            
Sbjct: 353 QLRWQRARPDPAQARHVLAGLSQRLAVALQRRH--------------------------- 385

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
            +     VS     L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 386 -ERDSARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRSPSALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|282911162|ref|ZP_06318964.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282324857|gb|EFB55167.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|312438008|gb|ADQ77079.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus TCH60]
          Length = 445

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 147/492 (29%), Positives = 231/492 (46%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   P ISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPTISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|157826084|ref|YP_001493804.1| exodeoxyribonuclease VII large subunit [Rickettsia akari str.
           Hartford]
 gi|166232361|sp|A8GPH1|EX7L_RICAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157800042|gb|ABV75296.1| exodeoxyribonuclease VII large subunit [Rickettsia akari str.
           Hartford]
          Length = 444

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 180/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +    
Sbjct: 8   NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+  L KI+F   +GIE ++ GK++++ G+S+YQ+ +++L P+G G +L  L  RK +L 
Sbjct: 67  WRPILAKIKFPLNDGIEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNDRKARLE 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF+     PIPF+P  I VITS TGAVI+DI+ RI  RFP R+II+PV VQG+    
Sbjct: 127 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSSN 185

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA AI   N L E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+G
Sbjct: 186 EIAEAIEGFNNLAE---VNKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+TL D AAD RAPTPT AAE AVPV+  L ++L + E  L N   RLIKY  + + 
Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLHSYEKILLNNTSRLIKYHEHNII 302

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  K        +   +  LD                    FN +   +    L      
Sbjct: 303 NYDKIHRYLSHYMDNRQQLLDETG-----------------FNLLDALLCFIEL------ 339

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                                     ++ KI      R      + Y    +      + 
Sbjct: 340 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 373

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              ++ +K+    + + + +L S  Y N LKRG+  ++    NF++ K   A +    I 
Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKIAAANEKIFNIK 433

Query: 489 FFDGQANAI 497
           F DG+   +
Sbjct: 434 FSDGEIKVV 442


>gi|268319200|ref|YP_003292856.1| exodeoxyribonuclease VII, large subunit [Lactobacillus johnsonii
           FI9785]
 gi|262397575|emb|CAX66589.1| exodeoxyribonuclease VII, large subunit [Lactobacillus johnsonii
           FI9785]
          Length = 453

 Score =  330 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 144/500 (28%), Positives = 237/500 (47%), Gaps = 58/500 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SVS+L++++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ ++
Sbjct: 4   NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++KL 
Sbjct: 63  FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF+++HK  IP  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE  
Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS++
Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   +   I  K   L
Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHAKRQIL 297

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           + L     L    +       ++D L   L   ++  +         +  R+K+      
Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMDNRLQHDGSTLRLLQERLKALNPSRK 357

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++                                               L      +++
Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +   +++ +K     ++   + L   +   T+ RGY    D   N +T    L    ++
Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVDQLKIDEKL 430

Query: 486 LINFFDGQANAIVINKAPPK 505
            ++F DGQA   V N    K
Sbjct: 431 KLHFKDGQAQVNVENIRREK 450


>gi|190575214|ref|YP_001973059.1| exodeoxyribonuclease VII large subunit [Stenotrophomonas
           maltophilia K279a]
 gi|226697613|sp|B2FN41|EX7L_STRMK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|190013136|emb|CAQ46768.1| putative exodeoxyribonuclease VII large subunit [Stenotrophomonas
           maltophilia K279a]
          Length = 443

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 131/495 (26%), Positives = 221/495 (44%), Gaps = 58/495 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             ++   + S+L+   + ++E +   + V  E+ G     +SGH YF+LKD  +++ A +
Sbjct: 3   PRNNDILTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPASGHLYFTLKDARAQLRAAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F+P EG+  LV GK+T +    +YQ++++ +  +G G L  A E+ K +L 
Sbjct: 62  FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF    K P+P   + +AVITSPTGA +RD+L  +  RFP L V + P  VQG    
Sbjct: 122 AEGLFDPARKRPLPTHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGSSAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I   +             R D+I+L RGGGS+EDLW FNDE + RAIA S  P++SA+
Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAASRTPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD++L+D+AADLRAPTP+ AAE+ VP +  L   L    AR+  +    ++  +   
Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRTAARMVQLQRHAMQQAMQRA 295

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           +  L  L   +    L   R R   L R L         R+     H    ++       
Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAVFNQQQERRAARLRHAAAVLRGHHPQRQ 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +   +  ++                                        
Sbjct: 356 LDAMQRRLAALRGRPQAAMQ---------------------------------------- 375

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484
                    ++     +    R L++ +   T+ RGY+   +  +   + +   +     
Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRTDDGTLVRKVNQVQPGDA 428

Query: 485 ILINFFDGQANAIVI 499
           +     DG  +  V 
Sbjct: 429 LQARVGDGVIDVQVK 443


>gi|228476091|ref|ZP_04060799.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis
           SK119]
 gi|228269914|gb|EEK11394.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis
           SK119]
          Length = 445

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 154/495 (31%), Positives = 236/495 (47%), Gaps = 61/495 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ ++K+  + +  L  + ++GE+S ++  HSSGH YF++KD +S I A+++
Sbjct: 2   SEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG  +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ K+KL +
Sbjct: 61  KGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNK 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G+F+  HK  IP  PK IA++T+ TGA IRDI   I  R+P +  I     VQG     
Sbjct: 121 QGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTTIDSRYPLVEKISISTLVQGINAKN 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I   +TL         D IIL RGGGSIEDLW+FN+E +VRAI     PIISA+G
Sbjct: 181 DIIEKIKYADTL-------GVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL+D+ AD+RA TPT AA +A P +  L   +      L   I +LI+ +   L+
Sbjct: 234 HETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLIEKQHKQLD 293

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L                  R D L ++L   L + I +K  +   +        L  +I
Sbjct: 294 YLSSYYKFKQPTLLYEQQIQRRDDLEKKLTQRLTLNIEKKRNNITVLRQHFNIRRLNDSI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + ++ I   +  +  +                                       LI  
Sbjct: 354 VQYQKMIRNNENRLINLTY------------------------------------NLINH 377

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            +  L +KI+            L   +  NT+ RGY+ I + +N  IT   +L  +  I 
Sbjct: 378 NKANLKNKIEQ-----------LNQLSPTNTMLRGYSII-NKDNKVITSTHDLNEQDEIT 425

Query: 487 INFFDGQANAIVINK 501
           ++  DG  +AIV   
Sbjct: 426 LSMKDGNIDAIVKKV 440


>gi|126455268|ref|YP_001065213.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           1106a]
 gi|242317050|ref|ZP_04816066.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1106b]
 gi|254296390|ref|ZP_04963847.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           406e]
 gi|254298214|ref|ZP_04965666.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           406e]
 gi|126228910|gb|ABN92450.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1106a]
 gi|157805939|gb|EDO83109.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           406e]
 gi|157808327|gb|EDO85497.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           406e]
 gi|242140289|gb|EES26691.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1106b]
          Length = 460

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +++                                                
Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
           ++     V+     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|148268008|ref|YP_001246951.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150394075|ref|YP_001316750.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|257793600|ref|ZP_05642579.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9781]
 gi|258420096|ref|ZP_05683051.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9719]
 gi|295406646|ref|ZP_06816451.1| exodeoxyribonuclease VII [Staphylococcus aureus A8819]
 gi|297245771|ref|ZP_06929636.1| exodeoxyribonuclease VII [Staphylococcus aureus A8796]
 gi|189037813|sp|A6U1Z5|EX7L_STAA2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|189037814|sp|A5IT52|EX7L_STAA9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|147741077|gb|ABQ49375.1| Exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946527|gb|ABR52463.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|257787572|gb|EEV25912.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9781]
 gi|257843807|gb|EEV68201.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           A9719]
 gi|294968393|gb|EFG44417.1| exodeoxyribonuclease VII [Staphylococcus aureus A8819]
 gi|297177422|gb|EFH36674.1| exodeoxyribonuclease VII [Staphylococcus aureus A8796]
 gi|315129801|gb|EFT85791.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|329727668|gb|EGG64124.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 445

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKKPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|53718518|ref|YP_107504.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           K96243]
 gi|126440472|ref|YP_001057980.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           668]
 gi|217420070|ref|ZP_03451576.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           576]
 gi|237811128|ref|YP_002895579.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           MSHR346]
 gi|254181532|ref|ZP_04888129.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1655]
 gi|254187490|ref|ZP_04894002.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254259099|ref|ZP_04950153.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1710a]
 gi|52208932|emb|CAH34871.1| putative exodeoxyribonuclease VII large subunit [Burkholderia
           pseudomallei K96243]
 gi|126219965|gb|ABN83471.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           668]
 gi|157935170|gb|EDO90840.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184212070|gb|EDU09113.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1655]
 gi|217397374|gb|EEC37390.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           576]
 gi|237505303|gb|ACQ97621.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           MSHR346]
 gi|254217788|gb|EET07172.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           1710a]
          Length = 460

 Score =  329 bits (844), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +++                                                
Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
           ++     V+     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|314936354|ref|ZP_07843701.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis
           subsp. hominis C80]
 gi|313654973|gb|EFS18718.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis
           subsp. hominis C80]
          Length = 445

 Score =  329 bits (844), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 154/495 (31%), Positives = 236/495 (47%), Gaps = 61/495 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ ++K+  + +  L  + ++GE+S ++  HSSGH YF++KD +S I A+++
Sbjct: 2   SEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG  +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ K+KL +
Sbjct: 61  KGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNK 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G+F+  HK  IP  PK IA++T+ TGA IRDI   I  R+P +  I     VQG     
Sbjct: 121 QGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTIIDSRYPLVEKISISTLVQGINAKN 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I   +TL         D IIL RGGGSIEDLW+FN+E +VRAI     PIISA+G
Sbjct: 181 DIIEKIKYADTL-------GVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL+D+ AD+RA TPT AA +A P +  L   +      L   I +LI+ +   L+
Sbjct: 234 HETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLIEKQHKQLD 293

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L                  R D L ++L   L + I +K  +   +        L  +I
Sbjct: 294 YLSSYYKFKQPTLLYEQQIQRRDDLEKKLTQRLTLNIEKKRNNITVLRQHFNIRRLNDSI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + ++ I   +  +  +                                       LI  
Sbjct: 354 VQYQKMIRNNENRLINLTY------------------------------------NLINH 377

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            +  L +KI+            L   +  NT+ RGY+ I + +N  IT   +L  +  I 
Sbjct: 378 NKANLKNKIEQ-----------LNQLSPTNTMLRGYSII-NKDNKVITSTHDLNEQDEIT 425

Query: 487 INFFDGQANAIVINK 501
           ++  DG  +AIV   
Sbjct: 426 LSMKDGNIDAIVKKV 440


>gi|302343361|ref|YP_003807890.1| exodeoxyribonuclease VII, large subunit [Desulfarculus baarsii DSM
           2075]
 gi|301639974|gb|ADK85296.1| exodeoxyribonuclease VII, large subunit [Desulfarculus baarsii DSM
           2075]
          Length = 448

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 135/493 (27%), Positives = 223/493 (45%), Gaps = 55/493 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                  VSEL   LK   E++   V V GE+SG R   +SGH YFSLKD+   + A+++
Sbjct: 8   TPRQVLGVSELLNRLKKQAEASFDFVWVEGEVSGLR-RPASGHCYFSLKDDGGVLRAVMF 66

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +     + F  E+G   L  G+++ +    + Q+++++  P G+G L  A E+ K++L  
Sbjct: 67  RHQAGLLRFRLEDGQRVLCQGRLSVYVARGEVQLVVDTAEPLGAGALALAFEQLKRRLAA 126

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G+F  + K P+P +P+ +AV+TSPTGA +RD L+ +  R   L V ++PV+VQG+    
Sbjct: 127 QGVFDAERKKPLPELPRRVAVVTSPTGAALRDFLKVVERRGQRLEVAVYPVQVQGEAAAG 186

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++  A      L E      P++I+L RGGGS EDLW +NDE +  AIA   +P++SA+G
Sbjct: 187 QMVVA------LAELAAWGWPEVIVLTRGGGSPEDLWAYNDEALALAIAACPLPVVSAVG 240

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD AADLRAPTPT AAE+ +  +E L   L      L   + R +  +   L 
Sbjct: 241 HEIDVTIADLAADLRAPTPTAAAELLLAGREELTLRLKAARQALAMAMARSLARRRVDLR 300

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L +A+ +  + L+  R RLD +   L       +  +    + ++ R+        + +
Sbjct: 301 HLRRAMADPRRRLADHRQRLDDVSARLLMAQRTALAGRQARLHRLVGRLAQARPERRLTQ 360

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   +  +   +   LR      +                                
Sbjct: 361 AQGRLEGLRGRLWAAMIARLRGRRAAAE-------------------------------- 388

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                          +    L++      L RGY  + D     + +  + A    I + 
Sbjct: 389 ---------------LLRGRLRALGPLAVLGRGYALVFDEKGRLLREAAHTAPGRAIEVK 433

Query: 489 FFDGQANAIVINK 501
              G   A+V   
Sbjct: 434 LQHGALRAVVEEV 446


>gi|270159878|ref|ZP_06188534.1| exodeoxyribonuclease VII large subunit [Legionella longbeachae
           D-4968]
 gi|289165368|ref|YP_003455506.1| Exonuclease VII, large subunit [Legionella longbeachae NSW150]
 gi|269988217|gb|EEZ94472.1| exodeoxyribonuclease VII large subunit [Legionella longbeachae
           D-4968]
 gi|288858541|emb|CBJ12422.1| Exonuclease VII, large subunit [Legionella longbeachae NSW150]
          Length = 442

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 144/494 (29%), Positives = 231/494 (46%), Gaps = 56/494 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                 +V++L+  +K  +E+ L  V V GE+S       SGH YF+LKD+ ++I  + +
Sbjct: 3   TQIAILTVAQLNRQVKSYLENELGIVYVEGELSNL-SKPVSGHYYFTLKDDVAQIRCVYF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K   +       +G   +  G+++ +     YQ+I+E +  +G G L    E+ K KL  
Sbjct: 62  KNRHSTATNKLSDGQHIIAGGRLSLYEARGDYQLIVEQVTEAGLGALYQRFEELKNKLAA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF+  +K PIP +P+ I V+TS TGA IRDIL  ++ RFPL  V+I+P +VQG    +
Sbjct: 122 EGLFASINKRPIPTMPRTIGVVTSTTGAAIRDILSTLARRFPLAHVLIYPSEVQGAGAAQ 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++  A+ + N         R D+++LARGGGSIEDLW FNDE + R IA+SSIPII+ +G
Sbjct: 182 QLIQALQRAN------EDKRSDVLLLARGGGSIEDLWAFNDEGLARQIASSSIPIITGVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ AD RA TPT AA  A P    L   L +  ARL + + R ++     L+
Sbjct: 236 HETDFTIADFVADYRAETPTAAAIAATPDCHELFKLLNHALARLQDAMHRFLQKYQIKLH 295

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L+  + +  + +S      D L R+L  ++  II +K    +     +K+      I +
Sbjct: 296 HLMDKISSPQKAISHYWQTTDYLERQLVSHMNSIIKQKKHQLHLFAINLKARNPKIQISQ 355

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            + ++ +    + Q++                                   + +L  ++ 
Sbjct: 356 IQINLQQLSTQLIQLM--------------------------------QAKLNQLKYQLS 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             LS                L + +   TL RGY      N   +   R +     I + 
Sbjct: 384 TQLST---------------LHAVSPLATLDRGYAIATKKN-KVLLSSRQVHIGDAINVR 427

Query: 489 FFDGQANAIVINKA 502
              G     +    
Sbjct: 428 LAVGNLTCAITQIQ 441


>gi|27468122|ref|NP_764759.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           ATCC 12228]
 gi|251810936|ref|ZP_04825409.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876055|ref|ZP_06284922.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           SK135]
 gi|31563112|sp|Q8CP38|EX7L_STAES RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|27315668|gb|AAO04803.1|AE016748_37 exodeoxyribonuclease large subunit [Staphylococcus epidermidis ATCC
           12228]
 gi|251805616|gb|EES58273.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295080|gb|EFA87607.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           SK135]
 gi|329737457|gb|EGG73711.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           VCU028]
          Length = 445

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 153/492 (31%), Positives = 239/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE  KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+  +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FNQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+ I N   PIISA+GHET
Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  I + I+++   LN + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L R+L H L   + +   H   +        L   I + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q I +    + +I+  +                                    IT ++ 
Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L +K++S           L + +  NT+ RGY  + + +N  +T    L    +I +  
Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGSVDATVKKV 440


>gi|283470802|emb|CAQ50013.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus ST398]
          Length = 445

 Score =  329 bits (843), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F + +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDNANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DVTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|283770600|ref|ZP_06343492.1| exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp.
           aureus H19]
 gi|283460747|gb|EFC07837.1| exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp.
           aureus H19]
          Length = 445

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLIENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|282916794|ref|ZP_06324552.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus D139]
 gi|282319281|gb|EFB49633.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus
           subsp. aureus D139]
          Length = 445

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 149/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++KH  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKHKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLIENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|319400859|gb|EFV89078.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis
           FRI909]
          Length = 445

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 151/492 (30%), Positives = 241/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQIDGIGNLYQKLEQLKKKLKKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+  +K  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FNQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+AI N   PIISA+GHET
Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKAIFNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  I + I+++   LN + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L R+L   L   + +   H   +        L   I + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNLLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q + +    + +I+  +                                    IT ++ 
Sbjct: 357 KQSVYQLHSRLSKIMSNN------------------------------------ITNLKT 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L +K+++           L + +  NT+ RGY  + + ++  IT    L    +I +  
Sbjct: 381 VLKNKLEN-----------LNNLSPTNTMLRGYAIV-NKDDEVITSTHKLNENDKISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A+V   
Sbjct: 429 KDGSVDAMVKKV 440


>gi|58337604|ref|YP_194189.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus
           NCFM]
 gi|227904244|ref|ZP_04022049.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus
           acidophilus ATCC 4796]
 gi|81311437|sp|Q5FJG6|EX7L_LACAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|58254921|gb|AAV43158.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus
           acidophilus NCFM]
 gi|227867892|gb|EEJ75313.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus
           acidophilus ATCC 4796]
          Length = 455

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 139/507 (27%), Positives = 249/507 (49%), Gaps = 58/507 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQVKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ +HK  IP  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD  
Sbjct: 121 AKEGLFNPEHKKKIPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR + N  +P+IS+
Sbjct: 181 AESLVRAMRQIAA-----EGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYNMQMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L++RL + +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLMDELAGIHQLQSRLFSSMQTIIRQKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +        +DRL + L+++++  +    + +  +  R+ +     
Sbjct: 296 LNRIQNSIIMREPTRLYDQQIETVDRLKQRLQNSMQNKLDHSKQDYRLLNQRLFAVNPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +Q  L   + +   ++ +L+                                   
Sbjct: 356 QINQMKQQRLFLAKRLSDNMQHYLKDK--------------------------------- 382

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                             +   + L  ++   TL+RG+    D +   I+  + +     
Sbjct: 383 --------------RNIFAQIVQQLDDYSPLKTLERGFVYTTDRDGKTISSVKQVNKNDS 428

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           + ++F DGQ  A V+     K    +K
Sbjct: 429 LNLHFKDGQVAAKVVEVKEEKNANEEK 455


>gi|226192868|ref|ZP_03788481.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|225935118|gb|EEH31092.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           Pakistan 9]
          Length = 460

 Score =  329 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +++                                                
Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
           ++     V+     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+    +  P
Sbjct: 445 ADVSFADVQP 454


>gi|315038643|ref|YP_004032211.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus
           GRL 1112]
 gi|312276776|gb|ADQ59416.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus
           GRL 1112]
          Length = 452

 Score =  329 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 138/498 (27%), Positives = 243/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+  HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS+
Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L +RL + +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +        +DRL   L ++++ ++    + +  +  R+ S     
Sbjct: 296 LNRVKNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMVDHSKQSYLLLKQRLFSASPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+ +Q      + +   ++ +                                     
Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K    S S T + L  ++   TL+RG+    D N   ++  + +  +  
Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKQES 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DGQ  A V    
Sbjct: 429 LNLHFKDGQVEATVTKIE 446


>gi|312869988|ref|ZP_07730127.1| exodeoxyribonuclease VII, large subunit [Lactobacillus oris
           PB013-T2-3]
 gi|311094573|gb|EFQ52878.1| exodeoxyribonuclease VII, large subunit [Lactobacillus oris
           PB013-T2-3]
          Length = 449

 Score =  329 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 240/500 (48%), Gaps = 63/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VS+L+ +LK   + +  L  V + GE+S +R    SGH YFSLKD+ + IDA+++
Sbjct: 4   SKYLTVSQLTKYLKLKFDRDPYLQTVYLTGELSNFRLR--SGHQYFSLKDDQAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +   +K++F PEEG++  V G +  +  S +YQI I+++ P G G+L  A E+ KKKL  
Sbjct: 62  RSQFSKVKFTPEEGMKLCVTGHVGLYERSGRYQIYIDTMEPDGVGSLYLAFEQLKKKLNA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLFS   K  +P  P+ IAV+TS  GAVIRDI   +  R+P+ +V++FP  VQG++   
Sbjct: 122 EGLFSRPKKA-VPLFPRRIAVVTSLNGAVIRDINTTVRRRYPIAQVVLFPTVVQGEKAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I +             D +I+ RGGGSIEDLW FN+E++ RAIA+  +P+IS++G
Sbjct: 181 DIARQIKR------AGERGDFDTLIIGRGGGSIEDLWPFNEEVVARAIADCPLPVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD T+AD  AD RA TPT AAE+A P + ++    + + + RL N +   I ++   L
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPQRLDNTLMLISDFQQRLYNTMRAQIDFEKKQL 294

Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L          +       ++D+L ++L    E  +         + NR+ +      
Sbjct: 295 AKLTDSYIFQQPTRLYENYAQKVDQLTQQLRQQQECRLTNAANDVAQVYNRLLAYNPQRL 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  + +    ++   +   +    + +                             
Sbjct: 355 VDQERLTVQQLAARLQTAAQAKTQQTAQQLQALT-------------------------- 388

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                                + L S      ++RGYT +   N   + Q   L T   +
Sbjct: 389 ---------------------KQLHSLDPLKIMERGYTYVTR-NGKVVNQAAQLNTGEPL 426

Query: 486 LINFFDGQANAIVINKAPPK 505
           L++F DG+    + +    K
Sbjct: 427 LLHFADGEVTVTITDIKEKK 446


>gi|188991270|ref|YP_001903280.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris str. B100]
 gi|226697621|sp|B0RRZ3|EX7L_XANCB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|167733030|emb|CAP51228.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv.
           campestris]
          Length = 446

 Score =  329 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 133/493 (26%), Positives = 224/493 (45%), Gaps = 60/493 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
                + S+L+   + ++E +   V V  E+       +SGH YF+LKD  ++I   ++K
Sbjct: 5   TEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVT-RPASGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A E+ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G+F  + K P+P   + +AVITSP+GA +RD+L  ++ RFP L V I P  VQGD    +
Sbjct: 124 GVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD +L+D+AAD+RAPTP+ AAE+ VP +  L + +   +ARL+ +    +   +   + 
Sbjct: 238 ETDVSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQLQQHTLGQAMQHADR 297

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +        + R +   R L   ++ I+ R           ++S        
Sbjct: 298 LALRLRARSPQARPQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQR--- 354

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
               H+   QQ +     Q                                    +  R+
Sbjct: 355 ----HLAPLQQRLRAAHPQ----------------------------------AAMQRRL 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486
           +          H  +    R L++ +   T+ RGY  + +  + + +     L    R+ 
Sbjct: 377 Q--------QDHLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVVRSAAELTQGDRLR 428

Query: 487 INFFDGQANAIVI 499
               DG    +V 
Sbjct: 429 AQLADGSVTVVVD 441


>gi|161523932|ref|YP_001578944.1| exodeoxyribonuclease VII large subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189351307|ref|YP_001946935.1| exodeoxyribonuclease VII large subunit [Burkholderia multivorans
           ATCC 17616]
 gi|221211445|ref|ZP_03584424.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD1]
 gi|160341361|gb|ABX14447.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189335329|dbj|BAG44399.1| exodeoxyribonuclease VII [Burkholderia multivorans ATCC 17616]
 gi|221168806|gb|EEE01274.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD1]
          Length = 460

 Score =  329 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 232/490 (47%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF+P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+A P +  L   L   E  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELAERERALARALARGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  + +L   L       +                        + R  + 
Sbjct: 314 VSPAERLQRQRAHVGQLAVRLATAAARPV---------------------RDARARFALA 352

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           + +    +    H R++     +++A+    R                            
Sbjct: 353 QLRWQRARPDPAHARHVLAGLSQRLAVALQRRH--------------------------- 385

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
            +     V+     L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 386 -ERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|262199955|ref|YP_003271164.1| exodeoxyribonuclease VII large subunit [Haliangium ochraceum DSM
           14365]
 gi|262083302|gb|ACY19271.1| exodeoxyribonuclease VII, large subunit [Haliangium ochraceum DSM
           14365]
          Length = 501

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 129/500 (25%), Positives = 214/500 (42%), Gaps = 55/500 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           +        SVS+       +++  +  V + GEI+      SSGH YFSLKD  S++ A
Sbjct: 14  RPGSRERPLSVSQTVGAAGRVLQQRIGTVWIEGEIASL-SRPSSGHLYFSLKDQRSQMRA 72

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++W+    ++ F  E+G      G++  +    K+Q   +   P+G G    ALE+ K+K
Sbjct: 73  VMWRSAAQRLRFRIEDGQTLRCHGELGIYERDGKFQFYAKYAEPAGLGAEALALEQLKRK 132

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186
           L  EGLF +  K P+P +P+ I ++TS +GA +RD+++ +  RFP+ +++    VQG E 
Sbjct: 133 LAAEGLFDEARKRPLPPLPRRIGLVTSKSGAAVRDVIRAVQRRFPVPILVADAVVQGREA 192

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P  I  A+  +            D++I+ RGGG+  DL  FNDE +VRA+A   +P+ISA
Sbjct: 193 PARIVRALRAI-------AQTDVDLVIVGRGGGAASDLAAFNDEQVVRAVAACPVPVISA 245

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D +L D AAD RA TPT A EMAVPV   L + L+  E                 
Sbjct: 246 VGHEIDMSLTDLAADRRAATPTAAGEMAVPVLADLAALLVEEER---------------- 289

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                +        L   R  LD+L R  +         + R    +  R++       +
Sbjct: 290 -----RLHRELSLLLQDYRQELDQLARSADAAWSRTTAARRRALGELRTRLEMRHPRAQL 344

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
             +R  + E +  +    ++       E                          ++L  R
Sbjct: 345 VAHRGVLSELENRMHVAEQRRRERARREL-------------------------EQLSER 379

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +      ++       ++    L++ +    L+RGY          +T    LA    + 
Sbjct: 380 VHTAGRQRLDGAGRDFALLVARLRAMSPLQVLERGYALAVGPAG-VVTDAAQLAPGDALQ 438

Query: 487 INFFDGQANAIVINKAPPKE 506
           +    G+ +  V +  PP  
Sbjct: 439 VRLARGELDCRVESVHPPGA 458


>gi|197121564|ref|YP_002133515.1| exodeoxyribonuclease VII large subunit [Anaeromyxobacter sp. K]
 gi|196171413|gb|ACG72386.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp. K]
          Length = 542

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 146/515 (28%), Positives = 231/515 (44%), Gaps = 58/515 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V EL+  LK  +E     V V GE++  R   +SGH YFSLKD+ + I A++W    
Sbjct: 76  PYTVRELTRALKSAIEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 134

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P EG+E L  G +  +P   KYQ++++ L P G+G     L++ K++L  EGL 
Sbjct: 135 RRLAFAPGEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQAEGLL 194

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+PF+P  + V TSPTGA +RD+L+ +  RFP   V+I P +VQG+     + +
Sbjct: 195 DPARKRPLPFLPARVGVATSPTGAALRDLLRVLHARFPGAPVLIAPCRVQGEGAAATVIS 254

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  L            D++++ RGGGS EDLW FNDE + RAIA   +P++SA+GHE D
Sbjct: 255 AVRALCRA-------GVDVVVVTRGGGSQEDLWAFNDERLARAIAACPVPVVSAVGHEVD 307

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD+RA TPT AA++ VPV++ L   +  L ARL       ++ +  TL +L  
Sbjct: 308 VTVADLVADVRAATPTHAAQLVVPVRDELVERVAALRARLARAQAGAVEGRRRTLRALRA 367

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    LS  R+RLD L    E  +     R+    + +  R+        ++  R  
Sbjct: 368 ELADPKHLLSRERHRLDDLAHRGEAAVRGPRRRERAALDALRGRLTRLEPRARVRALRAR 427

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +    + +        R   +                                R+E    
Sbjct: 428 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 452

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                           L+       L RG+      + + + +  +      + +   +G
Sbjct: 453 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSADAQVGDAVRVALAEG 499

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527
             +A +       E P         + E+ G  GE
Sbjct: 500 WLDARITG-RDAGEDPLPGRSGPAGEPERPGHGGE 533


>gi|254521090|ref|ZP_05133145.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas sp.
           SKA14]
 gi|219718681|gb|EED37206.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas sp.
           SKA14]
          Length = 443

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 130/495 (26%), Positives = 219/495 (44%), Gaps = 58/495 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             +   ++ S+L+   + ++E +   + V  E+ G     +SGH YF+LKD  +++ A +
Sbjct: 3   PRNDDIFTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPASGHLYFTLKDARAQLRAAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F+P EG+  LV GK+T +    +YQ++++ +  +G G L  A E+ K +L 
Sbjct: 62  FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF    K P+P   + +AVITSPTGA +RD+L  +  RFP L V + P  VQG    
Sbjct: 122 AEGLFDPARKRPMPAHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGSSAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I   +             R D+I+L RGGGS+EDLW FNDE + RAIA    P++SA+
Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAAGHTPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD++L+D+AADLRAPTP+ AAE+ VP +  L   L    AR+  +    ++  +   
Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRTAARMVQLQRHAMQQAMQRA 295

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           +  L  L   +    L   R R   L R L         R+     H    ++       
Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAAFNQQHERRAARLRHAAAVLRGHHPQRQ 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +   +  ++                                        
Sbjct: 356 LDAMQRRLAALRGRPQSAMQ---------------------------------------- 375

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484
                    ++     +    R L++ +   T+ RGY+   +  +   +     +     
Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRSDDGALVRHVDQVQPGDA 428

Query: 485 ILINFFDGQANAIVI 499
           +     DG  +  V 
Sbjct: 429 LQARVGDGVIDVQVK 443


>gi|257875396|ref|ZP_05655049.1| exonuclease VII [Enterococcus casseliflavus EC20]
 gi|257809562|gb|EEV38382.1| exonuclease VII [Enterococcus casseliflavus EC20]
          Length = 450

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 146/498 (29%), Positives = 243/498 (48%), Gaps = 62/498 (12%)

Query: 10  LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ ++K    V+  L  V + GEIS +R   +  H YFSLKD+ ++I  +
Sbjct: 1   MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  +K+ F PEEG++ + +G+IT +  S  YQ++I+ + P G G L  A E+ K+KL
Sbjct: 59  MFKGAFDKLRFQPEEGLKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLFS   ++ +P  PK IAV+TSP+GAVIRDI+     R+P+ +++++P  VQG++ 
Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++   I ++            D +I+ RGGGSIEDLW FN+E + RAI ++  PIIS+
Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPIISS 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +  I+YK   
Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291

Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              +         ++       +LD+L + ++  L+ +++ K R    +I+R+       
Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRQAQQLISRLAQQQPKA 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q + Q +    Q + + +K        +    +                         
Sbjct: 352 RLQASNQEVSYLSQRLTKAMKDIYAAKENQFANAVQS----------------------- 388

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+     N   I     +  + +
Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDAIEPEDQ 423

Query: 485 ILINFFDGQANAIVINKA 502
           + I++ DGQA   VI+  
Sbjct: 424 LAIHYQDGQALVEVISTE 441


>gi|255020993|ref|ZP_05293047.1| Exodeoxyribonuclease VII large subunit [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969548|gb|EET27056.1| Exodeoxyribonuclease VII large subunit [Acidithiobacillus caldus
           ATCC 51756]
          Length = 446

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 137/499 (27%), Positives = 245/499 (49%), Gaps = 55/499 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            N  + P  SVSEL+  ++ I+E N   + V GEIS +    +SGH YFSLKD+ +++  
Sbjct: 2   TNEAEIPALSVSELNRSVREILEGNFPLLRVTGEISNFV-QPASGHWYFSLKDDRAQVRC 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++         P++G++  V+ + T + G   +Q++IESL   G+G L       K+K
Sbjct: 61  AMFRARNALCRLRPKDGLQVQVLAQPTLYEGRGDFQLLIESLTAVGAGDLQARFAALKEK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L  EGLF+ + K P+P  P+ +AVI+S +GA + DI   ++ R+P+  ++++PV VQGD+
Sbjct: 121 LAAEGLFAPELKRPLPAWPRRVAVISSASGAALHDIRVTLARRWPVLEIVVYPVLVQGDQ 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +I  A+ +     +       D++ILARGGGS EDLW FN+E + RAI    +P+++
Sbjct: 181 AAAQICAALQRAGQRAQE------DLVILARGGGSAEDLWCFNEESVARAIRACPLPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T+AD+AADLRAPTPT AAE A P    ++  +  L+ +L   ++R ++ +  
Sbjct: 235 GIGHEIDFTIADFAADLRAPTPTAAAEAASPDGIEIRDRIEKLKQQLTRAMVRRLREETQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L+ L   L +  Q L   ++RL  L + L   +   ++       ++  R +S    H 
Sbjct: 295 RLDHLRLRLRDPRQALDHGQHRLAGLQQRLRQAVRRRLWEARERLANLDRRRRSHHPQHL 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  +++L +++ +E+ +   L +     ++                            
Sbjct: 355 LLQGERNLLNQRKALERAMGLRLEHQQQRLQQLRNA------------------------ 390

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                                  LQ    +  L+RG++ ++D +   +   R++     +
Sbjct: 391 -----------------------LQLLNPEAVLQRGFSILRDGDGQIVRDSRSVGLGAEL 427

Query: 486 LINFFDGQANAIVINKAPP 504
                 G+    V  ++P 
Sbjct: 428 DATLARGRLRLQVRGRSPE 446


>gi|194366532|ref|YP_002029142.1| exodeoxyribonuclease VII large subunit [Stenotrophomonas
           maltophilia R551-3]
 gi|226697612|sp|B4SQC8|EX7L_STRM5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194349336|gb|ACF52459.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas
           maltophilia R551-3]
          Length = 443

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 133/495 (26%), Positives = 222/495 (44%), Gaps = 58/495 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             ++   + S+L+   + ++E +   + V  E+ G     SSGH YF+LKD  +++ A +
Sbjct: 3   PRNNDILTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPSSGHLYFTLKDARAQLRAAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F+P EG+  LV GK+T +    +YQ++++ +  +G G L  A E+ K +L 
Sbjct: 62  FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF    K P+P   + +AVITSPTGA +RD+L  +  RFP L V + P  VQG+   
Sbjct: 122 AEGLFDQARKRPMPAHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGNSAA 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I   +             R D+I+L RGGGS+EDLW FNDE + RAIA S  P++SA+
Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAASRTPVVSAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD++L+D+AADLRAPTP+ AAE+ VP +  L   L    AR+  +    ++  +   
Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRNAARMVQLQRHTMQQAMQRA 295

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           +  L  L   +    L   R R   L R L         R+     H    ++       
Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAAFNQQQERRAARLRHAAAILRGHHPQRQ 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +   +  ++                                        
Sbjct: 356 LDAMQRRLAALRGRPQIAMQ---------------------------------------- 375

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484
                    ++     +    R L++ +   T+ RGY+   +  +   + Q   +     
Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRSDDGTLVRQVDQVQPGDA 428

Query: 485 ILINFFDGQANAIVI 499
           +     DG  +  V 
Sbjct: 429 LQARVGDGVIDVQVK 443


>gi|46446255|ref|YP_007620.1| putative exodeoxyribonuclease VII, large chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46399896|emb|CAF23345.1| putative exodeoxyribonuclease VII, large chain [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 482

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 249/489 (50%), Gaps = 16/489 (3%)

Query: 21  SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80
           +  +K  +ES    + ++GEIS ++   SSGH YFSLKD  ++I A+++K   + ++  P
Sbjct: 2   TQAIKLNLESMFPFIYLQGEISNFKEQ-SSGHFYFSLKDATAQISAVMFKAEASLLKTPP 60

Query: 81  EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140
           + G   ++ G+I+ +P    YQ+II  L   G G LL  LE+ K KL ++G F   HK P
Sbjct: 61  KGGDHVMIKGEISVYPPKGNYQLIIRELSYVGIGELLQKLEQLKIKLHQKGWFKAIHKKP 120

Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNT 199
           IP  PK I VITSPTGAVI+DILQ ++ RF    +I+ PVKVQG+   KEIA AI Q N 
Sbjct: 121 IPRFPKKIGVITSPTGAVIQDILQILTRRFSGFHLILNPVKVQGEGAAKEIARAIEQFNR 180

Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259
            +        D++I+ RGGGS+EDLW FN+E++  AI NS IPIISA+GHETD  +ADY 
Sbjct: 181 YQ------LVDVLIVGRGGGSLEDLWPFNEEIVAEAIYNSQIPIISAVGHETDHCIADYV 234

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNS 317
           AD+RAPTP+ AAE+ +  K      L  L  R+   I  LI+     L    K L   + 
Sbjct: 235 ADIRAPTPSAAAEIVISEKNQQLEHLKTLRRRIQQAIQNLIQSGHYRLKGFSKHLFITHP 294

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    +LD L  +L + L+ II  K         + +     + I   R+H+ +  
Sbjct: 295 HVITEWRMQKLDDLKEDLSNQLKQIITFKKHQLESFARQTQLLKPSNQIIHLRKHLRDWN 354

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EFILSHKI 435
               + ++     +   KK+   I + L++Q    I       K    RI    ++  +I
Sbjct: 355 GIFSRKMQD---LLLQNKKKIEQIEYRLKQQWTYLIGQKKYLFKGKDYRIKNNQLIRDRI 411

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFFDGQA 494
            S    +   T IL++   KN LK+GY+ +        I     L    +  +   DG+A
Sbjct: 412 LSSKQKILHITNILKAVDPKNLLKQGYSILFAEKEVFVINSICKLKKGQKAKLLLSDGEA 471

Query: 495 NAIVINKAP 503
              +    P
Sbjct: 472 LITINEVNP 480


>gi|323440421|gb|EGA98133.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus O11]
          Length = 445

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 231/492 (46%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG+
Sbjct: 5   LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ F     YQI +  +   G G L   LE  KKKL EEG 
Sbjct: 64  ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  IP  PK IAV+T+ TGA IRDI   I+ RFPL   I     VQG++   +I 
Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIEYADSL-------GVDAIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D AAD+RA TPT AA +A P +  L   +   +  L   I + ++ +   +  L 
Sbjct: 237 DFTLSDVAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L + L+  ++    ++      +  R     L+ ++ + 
Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+ L+    + ++                                           +  
Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +          V      L + +  NT+ RGY  + +  +  IT  ++L    ++ +  
Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +A V   
Sbjct: 429 KDGLVDAKVTKV 440


>gi|256851328|ref|ZP_05556717.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           27-2-CHN]
 gi|260660752|ref|ZP_05861667.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           115-3-CHN]
 gi|282933227|ref|ZP_06338614.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           208-1]
 gi|297206198|ref|ZP_06923593.1| exodeoxyribonuclease VII large subunit [Lactobacillus jensenii
           JV-V16]
 gi|256616390|gb|EEU21578.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           27-2-CHN]
 gi|260548474|gb|EEX24449.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           115-3-CHN]
 gi|281302731|gb|EFA94946.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           208-1]
 gi|297149324|gb|EFH29622.1| exodeoxyribonuclease VII large subunit [Lactobacillus jensenii
           JV-V16]
          Length = 453

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 137/501 (27%), Positives = 239/501 (47%), Gaps = 58/501 (11%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              SVS+L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  ++I  ++++
Sbjct: 6   KYLSVSDLNYYINLKFKNDPYLHQVFLKGELSNFRYRRNS-HQYFSLKDEKAKISVVMFR 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               K++F PEEG++  V G I  +P    YQ   +++ P+G G L   L + + KL +E
Sbjct: 65  SAFEKLKFKPEEGMKVYVSGYIGVYPPQGTYQFYAQTMEPAGLGELYERLRQLQDKLSKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD   + 
Sbjct: 125 GLFAAEHKKKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTAAES 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           + NA+ Q+            D++I+ RGGGS+EDLW FN+E++VR++ +  +P+IS++GH
Sbjct: 185 LVNAMNQIKERASE-----YDVMIIGRGGGSLEDLWPFNEEIVVRSVYSMPMPVISSVGH 239

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD TL D  AD+RA TPT AAE A P      + L  L++RL   +   I+ +   L  
Sbjct: 240 ETDTTLCDLVADVRAATPTAAAEYATPNLSDELAGLHQLQSRLLTSMQACIRERKQALLR 299

Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           +     +    +        +D+L   L   +++I+    ++      ++ +      ++
Sbjct: 300 IQNSPIMREPMRLYDQQVQSVDQLTGRLMQIIKVILQNNRQNLKISEQKLLAQSPKRLLE 359

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +Q      Q +   +K  L+   +  ++                              
Sbjct: 360 RTKQSNDYLNQRLLNAIKTLLKDKRIAFQQ------------------------------ 389

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                              + L+  +    L RGY    D     I   +N+A    + +
Sbjct: 390 -----------------QVQTLEDISPLKVLSRGYVYTTDQAGKTIMSTKNIAKDEVLNL 432

Query: 488 NFFDGQANAIVINKAPPKEQP 508
           +F DG+A A ++     ++  
Sbjct: 433 HFADGKAKAKILEVEDNEDAK 453


>gi|221199220|ref|ZP_03572264.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2M]
 gi|221180505|gb|EEE12908.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2M]
          Length = 460

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 232/490 (47%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF+P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    + +  A+
Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAERLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+A P +  L   L   E  L   ++R ++ +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELAERERALARALVRGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  + +L   L       +                        + R  + 
Sbjct: 314 VSPAERLQRQRAHVGQLAVRLATAAARPV---------------------RDARARFALA 352

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           + +    +    H R++     +++A+    R                            
Sbjct: 353 QLRWQRARPDPAHARHVLAGLSQRLAVALQRRH--------------------------- 385

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
            +     V+     L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 386 -ERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|296106405|ref|YP_003618105.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila
           2300/99 Alcoy]
 gi|295648306|gb|ADG24153.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila
           2300/99 Alcoy]
          Length = 443

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 156/496 (31%), Positives = 237/496 (47%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S   P  +VS+L+  +K  +E+ +  V V GEIS      SSGH YF+LKD+ ++I    
Sbjct: 2   SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60

Query: 69  WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +K    + +     +G + +  GK++ +    +YQ+I+E ++ +G G L    E+ K KL
Sbjct: 61  FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGVLYQRFEELKIKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+ + K  +P IP+ I +ITSPTGA I+DIL  ++ RFP+ RVII+P +VQG   
Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARVIIYPSEVQGQTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P+++ NA+   N         R  ++ILARGGGSIEDLW FNDE + R IA S IP++S 
Sbjct: 181 PQQLVNALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+ AD RA TPT AA    P    L + L     RL++ IIRLIK     
Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN L+  + +  Q +S     LD L R+L   +   I       N  + +++++     I
Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFLTQLQANNPKIQI 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ +  +                                    +  I  L   I+  + +
Sbjct: 355 ERTKIQL------------------------------------QQLIMQLTQEIRIKVNQ 378

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++  LS  + + H             +   TL RGY  +   N   +   +       I 
Sbjct: 379 LKNQLSTILSTLHA-----------VSPLATLDRGYAIV-SKNQRILFAAQQAQIGDTID 426

Query: 487 INFFDGQANAIVINKA 502
           I    G     V    
Sbjct: 427 IRLAKGSLACEVTQIK 442


>gi|325957125|ref|YP_004292537.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus
           30SC]
 gi|325333690|gb|ADZ07598.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus
           30SC]
          Length = 452

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 139/498 (27%), Positives = 242/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+  HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS+
Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L +RL + +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +        +DRL   L ++++ +I    + +  +  R+ S     
Sbjct: 296 LNRVKNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMIDHSKQSYLLLKQRLFSASPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+ +Q      + +   ++ +                                     
Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K    S S T + L  ++   TL+RG+    D N   ++  + +     
Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKLES 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DGQ  A V    
Sbjct: 429 LNLHFKDGQVEATVTKIE 446


>gi|330444324|ref|YP_004377310.1| exonuclease VII large subunit [Chlamydophila pecorum E58]
 gi|328807434|gb|AEB41607.1| exonuclease VII large subunit [Chlamydophila pecorum E58]
          Length = 554

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 153/560 (27%), Positives = 252/560 (45%), Gaps = 70/560 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  P  +V+ L+ ++K ++ES+  H+ V+GE+S       SGH YF +KD  S ++   +
Sbjct: 1   MSVPPQAVTSLTENIKTLLESHFCHIVVKGELSNVSLQP-SGHLYFGIKDEKSFLNGAFF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                     P++G   ++ GK+T +     YQI+  +L+ +G G LL   E+ KK+L  
Sbjct: 60  HFKSKFFGRRPKDGDAVILHGKLTVYAPRGLYQIVAHALVYAGEGDLLQKFEELKKRLTT 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPK 188
           EG F+ + K  +P  PK I VITSPTGAV++DIL+ +S R +  +V+I+PV VQG+   K
Sbjct: 120 EGYFAMEKKKSLPKAPKCIGVITSPTGAVVQDILRVLSRRCYNYKVLIYPVTVQGESATK 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI  A+  +N           D++ILARGGGSIEDLW FN+E +V+AI  S IPIISA+G
Sbjct: 180 EICKALEVMNA------ENIADVLILARGGGSIEDLWSFNEEALVKAIHASKIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL D AAD+RAPTP+ AAE+  P  E     L  +   L +   +  + K + L 
Sbjct: 234 HETDYTLCDLAADVRAPTPSAAAEIVCPSSEQQLQQLQGILNHLLSHSQQFFQGKKDQLL 293

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---- 364
              + L N  +    ++ +LD +   +   +   +    +   H    ++ D L      
Sbjct: 294 VWKRQL-NRTEFFRTAQQQLDFVRIAIHREMLGKLLHYQQRCEHFSRWLQGDLLNKLSFR 352

Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390
                                              + ++ Q ++  +Q ++ ++ + L  
Sbjct: 353 LQDVKKMLNHACTHKLSSLQNHYDLTKKKFSTLPQLHESAQRLISLKQQLDTLIFRRLYL 412

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH----------- 439
                  K ++L  +      ++      +  L  R+       + +             
Sbjct: 413 YSQAFAHKRSLLKHVETTLYQQLHTHRQTLDLLQKRLFSHAQVVLANNKATHAHVRDRLS 472

Query: 440 ----TSVSITT-------RILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILI 487
                 +           + L     KN LKRGY  + D N    I   ++L   +R+ +
Sbjct: 473 ATMQQRLESAAVLYKNVCKHLLVLNPKNVLKRGYAMLFDFNEKIAILSVKSLQPSSRVRV 532

Query: 488 NFFDGQANAIVINKAPPKEQ 507
              DG+A   V      +  
Sbjct: 533 QLHDGEAILAVTETKSFEPT 552


>gi|121601292|ref|YP_991915.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei SAVP1]
 gi|121230102|gb|ABM52620.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei SAVP1]
          Length = 510

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 130/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 71  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 129

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 130 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 189

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 190 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 249

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 250 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 303

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 304 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 363

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 364 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 421

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +                         + RI      +              
Sbjct: 422 AFAQRLDATL-------------------------QRRIERDTARV-------------- 442

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                   +     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 443 --------AACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 494

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 495 ADVSLADVQP 504


>gi|242373823|ref|ZP_04819397.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           M23864:W1]
 gi|242348377|gb|EES39979.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis
           M23864:W1]
          Length = 445

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 150/492 (30%), Positives = 245/492 (49%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD  S I A+++KG 
Sbjct: 5   LSVSTLTKYIKYKFDQDPHLQSVLLKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EG 
Sbjct: 64  ASKLGFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLAKEGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F +  K PIP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +  ++I 
Sbjct: 124 FDNNIKKPIPKFPKKIAVLTASTGAAIRDIHSTINSRYPLVEQIQISTLVQGTQAKEDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +V+AI   + PIISA+GHET
Sbjct: 184 EKIQYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVKAIYQCATPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   +  L   I + I+ +   L+ L 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYIEQQKKQLSHLS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D L ++L+      I R+++H   +        L  +I ++
Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQITLTNIERQHQHLKLLRQSFNLKILSQHINQD 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q+I + +  + Q                                     I   +++++ 
Sbjct: 357 KQNISQLRSRMSQ------------------------------------KINNDLSKMKA 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L +KI++           L + +  NT+ RGY  + + ++  +T   +++    I +  
Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDISENDSISLTM 428

Query: 490 FDGQANAIVINK 501
            DG  +AIV   
Sbjct: 429 KDGNVDAIVKKV 440


>gi|328952414|ref|YP_004369748.1| Exodeoxyribonuclease 7 large subunit [Desulfobacca acetoxidans DSM
           11109]
 gi|328452738|gb|AEB08567.1| Exodeoxyribonuclease 7 large subunit [Desulfobacca acetoxidans DSM
           11109]
          Length = 460

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 232/500 (46%), Gaps = 56/500 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YSV++L+  +K  +E     V V+GE+S  R  H SGH YF+LKD  S++  +I++   
Sbjct: 15  IYSVADLTRMIKDRLEQEFPLVWVQGEVSNLRSPH-SGHCYFTLKDEASQLRVVIFRSYY 73

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P + ++ +  G++T +    +YQ++ +   P G G L  A E+ K +L  EGLF
Sbjct: 74  QAMRFKPVDSLKIVCRGQLTVYEPRGEYQLLADYTEPLGMGALAQAFEQLKARLDAEGLF 133

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             ++K P+P++P  +AV+TSP+GA IRD LQ +  RFP ++V+++PV+VQG    +EI  
Sbjct: 134 DPRYKKPLPYLPHRLAVVTSPSGAAIRDFLQILHRRFPNIQVLVYPVRVQGAGAAEEIVG 193

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  LNT+      P  D+IIL RGGGS+EDLW FN+E + RAI  S+IP+ISA+GHE D
Sbjct: 194 ALRTLNTM------PDLDVIILTRGGGSLEDLWAFNEEKVARAIFQSTIPVISAVGHEID 247

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD RAPTP+ AAE+ V   E LQ  L  L   L    + L++     L     
Sbjct: 248 FTIADFVADRRAPTPSAAAELVVRPLEELQLELQRLSLSLQRRFLNLLQQGRERLRLSGH 307

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  + ++  R RLD    +L+   +               R+    +    +  R  
Sbjct: 308 RLKDPRRRVADLRLRLDERAEQLQRLWQTKRRDAAAKLRLAAARLSLLSVRRRSEGQR-- 365

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                          +L +Q   R+  +         R+     
Sbjct: 366 -------------------------------LLLQQDNRRLQQVLRRRLSDHRRL----- 389

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRILINFFD 491
                    +   T  L+       L RGY   +   +   +   +  A    +L++   
Sbjct: 390 ---------LEHLTDRLRPLNPAAILARGYAVALTLPDRAVLRTSQQTAVGAPVLVHLHH 440

Query: 492 GQANAIVINKAPPKEQPTKK 511
           G     V +          K
Sbjct: 441 GALRCQVTSITDETLPLPTK 460


>gi|160938276|ref|ZP_02085631.1| hypothetical protein CLOBOL_03172 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438649|gb|EDP16406.1| hypothetical protein CLOBOL_03172 [Clostridium bolteae ATCC
           BAA-613]
          Length = 428

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 126/495 (25%), Positives = 223/495 (45%), Gaps = 79/495 (15%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+VS+++ +++++   +   + + +RGE+S  +  H+SGH YF+LKD  ++I A+++ G
Sbjct: 4   VYTVSQVTAYIRNMFTQDFALNRISIRGEVSNCK-YHTSGHIYFTLKDGGAQIAAVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               ++F   EG E  V G +  +    +YQ+  + +   G G L    EK + +L E G
Sbjct: 63  QRKGLDFELREGQEVTVSGTVDVYERDGRYQLYAKEITREGKGDLFRQFEKLRNELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F   +K PIP   + + ++T+ TGA IRDI+   + R P +++I++P  VQG++    I
Sbjct: 123 MFDSCYKQPIPKYARKVGIVTAGTGAAIRDIMNISARRNPYVQLILYPALVQGEQAKYSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A  I  L+ +         D++I+ RGGGSIEDLW FN+EM+ RAI N + P+ISA+GHE
Sbjct: 183 AKGIETLDRM-------GLDVLIVGRGGGSIEDLWAFNEEMVARAIFNCTTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV         +      L                  
Sbjct: 236 TDVTIADYVADLRAPTPSAAAELAVFDYGQFVEQVNLYRQVL------------------ 277

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                                    E ++E  + + +   +    R+K       +   R
Sbjct: 278 -------------------------ERSMERRLEKLHFRLDQCGMRLKLLSPEKQLNDRR 312

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + + +  +E+++                         +  +      ++    R+E  
Sbjct: 313 QRLADMESRLERMM-------------------------EENLGLSRRKLEDRRRRLEAR 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++  +      +++ +  L   +    L  G+  + D      T          I ++  
Sbjct: 348 MALGLTEGKHRLALLSGRLDGLSPLKKLGGGFGFVTDARGRAFTSITQAEPGDIIRVSVK 407

Query: 491 DGQANAIVINKAPPK 505
           DG+ +A V+     K
Sbjct: 408 DGRVDARVVETESMK 422


>gi|227530528|ref|ZP_03960577.1| exodeoxyribonuclease VII large subunit [Lactobacillus vaginalis
           ATCC 49540]
 gi|227349534|gb|EEJ39825.1| exodeoxyribonuclease VII large subunit [Lactobacillus vaginalis
           ATCC 49540]
          Length = 445

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 148/497 (29%), Positives = 238/497 (47%), Gaps = 63/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +VSEL+ +LK   + +  L  V + GE+S +R      H YFS+KD ++ IDA+++
Sbjct: 4   SQYLTVSELTSYLKQKFDRDPYLKTVYLTGELSNFRLRQR--HQYFSIKDENAVIDAVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    ++ F PE G++ LV+G I  +  S +YQI ++ + P G G L    E+ KKKL  
Sbjct: 62  ERQFRQVNFRPETGMKILVVGHIGLYEKSGRYQIYVDRMEPDGLGALYLQFEQLKKKLGA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF  Q   PIP  PK IAV+TS  GAVIRDI   +  R+P+ +V++FP  VQGD+   
Sbjct: 122 EGLFD-QIPRPIPQFPKRIAVVTSLDGAVIRDINTTVRRRYPIAQVVLFPTVVQGDKAAT 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA  I + N +         D +I+ RGGGS+EDLW FN+E++ RAIA+S IP+IS++G
Sbjct: 181 DIARQINRANQI------GNFDTMIIGRGGGSLEDLWPFNEEIVARAIADSHIPVISSVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL---IKYKIN 305
           HETD T+AD  AD RA TPT AAE+A P +       I  +    N  ++       K  
Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPNRLADVLMTIQDDQVRLNNTMKKLIDFDRKQL 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                        +       +LD+L + LE+N+  ++  +      +  R++ +   H 
Sbjct: 295 QKQLQSYIFQQPSRLYENYAQKLDQLTQTLENNVSNLVKDRLNRVQQLQGRLQINSPQHT 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ ++ + + Q  +    K   +                                    
Sbjct: 355 IERAQETVTQLQNRLLSSAKNSQQQRHQ-------------------------------- 382

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                           V+   + L S +    + RGY+ +    N+ +   + L +  ++
Sbjct: 383 ---------------QVTSLIQQLDSLSPLKIMGRGYSYVTY-RNSVVNTVKELKSGQQV 426

Query: 486 LINFFDGQANAIVINKA 502
            ++F DG+A A +I   
Sbjct: 427 SLHFNDGKATAKIIGTK 443


>gi|325928072|ref|ZP_08189285.1| Exodeoxyribonuclease VII large subunit [Xanthomonas perforans
           91-118]
 gi|325541570|gb|EGD13099.1| Exodeoxyribonuclease VII large subunit [Xanthomonas perforans
           91-118]
          Length = 445

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 127/496 (25%), Positives = 224/496 (45%), Gaps = 60/496 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +    + S+L+   + ++E +   V V  E+S      +SGH YF+LKD  ++I   ++K
Sbjct: 5   NDQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                ++F P EG+  L  G++T +     YQ++++ +  +G G L  A ++ + +L  E
Sbjct: 64  PKSTWLKFQPREGLRVLARGRVTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K  +P   + +AVITSP+GA +RD+L  ++ RFP L V + P  VQGD    +
Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I       + L+      R D+I++ RGGGS+EDLW FNDE + RAIA +  P++SA+GH
Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D+ AD+RAPTP+ AAE+ VP +  L + +   +AR+  +    +   +   + 
Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +    L     R     R+L   +  ++ R          ++++        
Sbjct: 298 LALRLRAQSPQARLQLLHRRQQDAGRQLRARMTQVLERLQARLQRGQAQLQAHNPQRQ-- 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                +   QQ +  +  Q                                    +  R+
Sbjct: 356 -----LAGLQQRLRALHPQ----------------------------------AAMQRRL 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486
           +             +    R L++ +   T+ RGY  +    +++ +     + T  R+ 
Sbjct: 377 QH--------DQLQLRSIARSLEAVSPLATVARGYAIVTRPADSSVVRSAAEVVTGERLR 428

Query: 487 INFFDGQANAIVINKA 502
               DG     V +  
Sbjct: 429 AQLADGSIQVRVESGE 444


>gi|325266885|ref|ZP_08133556.1| exodeoxyribonuclease VII large subunit [Kingella denitrificans ATCC
           33394]
 gi|324981626|gb|EGC17267.1| exodeoxyribonuclease VII large subunit [Kingella denitrificans ATCC
           33394]
          Length = 450

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 125/493 (25%), Positives = 233/493 (47%), Gaps = 57/493 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            +VSEL+     ++++ L+   V GEIS      +SGH YF+LKD+ +++   ++K    
Sbjct: 11  LTVSELNAAADDLLQTELAGYWVSGEISNLT-RAASGHYYFALKDDQAQVRCALFKFAAA 69

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++    +EG    V+GKI  +    ++QI +  +   G G L    E+ K +L E+G F 
Sbjct: 70  RLAQPLKEGDHVEVLGKIGIYGARGEFQITVNEVRQMGLGRLFERYERLKARLQEQGFFD 129

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           ++ K  +P  P+ I ++TS   A +RD++  +  R P + VI++P  VQG    ++IA A
Sbjct: 130 EERKRRLPAQPRAIGIVTSLAAAALRDVVSTLKRRAPHIPVIVYPTPVQGAGSEQQIAQA 189

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I      +E       D++I+ RGGGSIEDLW FN+E +V A+A  ++P++S +GHETD+
Sbjct: 190 IQTAQQRQE------VDVLIVCRGGGSIEDLWAFNEEAVVYAVAACTLPVVSGVGHETDF 243

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL D+ AD+RAPTPT AAE+  P        L ++   L     +  +      + L + 
Sbjct: 244 TLCDFVADVRAPTPTAAAELVSPNNAEHLRRLQHIGQVLQQYAWQHYRNAAQKTDWLAQR 303

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           + +  Q L+     L  L + ++H       R+      +   + ++    +I + +Q +
Sbjct: 304 IQHPRQKLAEQNKTLQYLAQSMQHYGRQRCERQQHRLQQLAYNLAANRP--DIAQQKQRL 361

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            + Q  +   +K                                   + L  +I+ ++ +
Sbjct: 362 SQVQAALSAAIK-----------------------------------QNLQDKIQRVMQY 386

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           +            +++ + +  + L+RGY  ++D   + + Q   L    ++ + F +GQ
Sbjct: 387 R------------QLMDATSPYSVLRRGYALVRDARGHVVRQAERLRLGQKVRVEFAEGQ 434

Query: 494 ANAIVINKAPPKE 506
           A+  V+ +    +
Sbjct: 435 ADMQVLPQQAQDD 447


>gi|327183849|gb|AEA32296.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus
           GRL 1118]
          Length = 452

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 138/498 (27%), Positives = 242/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+  HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS+
Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L +RL + +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +        +DRL   L ++++ ++    + +  +  R+ S     
Sbjct: 296 LNRVQNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMVDHSKQSYLLLKQRLFSASPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +Q+ +Q      + +   ++ +                                     
Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K    S S T + L  ++   TL+RG+    D N   ++  + +     
Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKLES 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DGQ  A V    
Sbjct: 429 LNLHFKDGQVEATVTKIE 446


>gi|89898503|ref|YP_515613.1| exodeoxyribonuclease VII large subunit [Chlamydophila felis
           Fe/C-56]
 gi|123483062|sp|Q253S0|EX7L_CHLFF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|89331875|dbj|BAE81468.1| exodeoxyribonuclease VII large subunit [Chlamydophila felis
           Fe/C-56]
          Length = 555

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 165/555 (29%), Positives = 261/555 (47%), Gaps = 69/555 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   P  +V+ L+  +K+++ESN  HV V+GE+S       SGH YF +KD+ S ++   
Sbjct: 2   TTSSPPQAVTTLTESIKNLLESNFCHVVVKGELSNVSLQP-SGHLYFGIKDSRSFLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQI+  +L+ +G G LL   E+ KK+L 
Sbjct: 61  FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EG F+ + K  +P IP+ I VITSPTGAVI+DIL+ +S R +  +++I+PV VQG    
Sbjct: 121 AEGYFALEKKQTLPNIPQSIGVITSPTGAVIQDILRVLSRRCYQYKILIYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           KEI+ AI ++N           D++ILARGGGSIEDLW FN+E++V+AI  SSIPIISAI
Sbjct: 181 KEISRAIEEMNK------ENLADVLILARGGGSIEDLWAFNEEIVVKAIDASSIPIISAI 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+AAD+RAPTP+ AAE+     E       +    LN    +L+  KI  +
Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSEQQIQVFKSYLRYLNAHSQQLLSGKIKQI 294

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363
               + L + D     +   LD L   +E +++  + +  + +      ++SD L     
Sbjct: 295 QQWKRYLDHVD-FFRSAHQSLDYLCLSVERSIQTKLSQYKQRYMQYARWLQSDVLQRMTY 353

Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
                                            HN Q+  Q +   +Q + + + Q L Y
Sbjct: 354 RLHDLWKMIVQAFHNRLTAAKHLCMQKKKNLTFHNTQQFIQKLDLWKQQLHRALTQRLGY 413

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429
                  +  +L     +   +       +  L  R+                       
Sbjct: 414 CSQSLTHQQTLLKHFTIKLNQQFTKGKHTLNLLQKRLTRTFANTVDEHRENYVRSRENLI 473

Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487
             L H ++         ++ L     KN  KRGY  + D N N  I   ++L   + + +
Sbjct: 474 FSLHHLVERNREKYYTLSKQLTLLNPKNVFKRGYAMLFDFNENFAIISAKSLHKHSCVRV 533

Query: 488 NFFDGQANAIVINKA 502
              DG+A   V +  
Sbjct: 534 RLQDGEATLTVTDIQ 548


>gi|220904225|ref|YP_002479537.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868524|gb|ACL48859.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 496

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 126/523 (24%), Positives = 210/523 (40%), Gaps = 49/523 (9%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     +V EL+  L+  +E     V VRGE++ +     SGH YFSLKD  +++  + +
Sbjct: 1   MQEAILTVRELTEQLRKSLEGRFPFVWVRGEVTNF-SRPGSGHVYFSLKDQDAQLQCVWF 59

Query: 70  KGTLNKIE--FLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
           +    + +  F P                   G++ L  G+I+ +    +YQ+ +E + P
Sbjct: 60  RHMQRQADQGFDPLTGEVFDEPRPSPLELLRNGLDVLCAGRISVYAPRGQYQLAVELVQP 119

Query: 111 SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170
           +G G L  A E+ K+KL   G F    K P+P  P+ +A++TSPTGA I D L+    R 
Sbjct: 120 AGEGLLAQAFEESKRKLAALGYFDHGRKRPLPRDPQRVALVTSPTGAAIHDFLELARDRG 179

Query: 171 -PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
               + +FP  VQG E    I  A+ + N+  +      P +I+L RGGGS+EDLW FN+
Sbjct: 180 SGSCIRLFPSLVQGAEAAPAIVRALAEANS--QAGQNDGPQVIVLVRGGGSLEDLWAFNE 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
           E + +A+  S +P+++ IGHE D TLAD  AD+RA TP+ AA++  P +  L   +    
Sbjct: 238 ESVAKAVFESRLPVLAGIGHEVDMTLADMTADMRAATPSHAAQLLWPPRLELHQRVDEAR 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           A L   + R ++     L    KAL                              R +  
Sbjct: 298 AALRRAMERRLESAGQRLREYEKALAWFSP------------------------QRHHER 333

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
               +  + +               +  +    +              ++  LH      
Sbjct: 334 LYERLAVLDAALARAARHWLESREAQTVRLECALRGSFGLEKLDIFDARLKHLHARLHAA 393

Query: 410 KNRIFYLHTH-IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
             R+       +     R++    + +     S+ +    L +      L RGY  +   
Sbjct: 394 LPRLTDERQRALNYAALRLQSAARNHVAQHERSLDVLGAALDAGDPLMPLSRGYALV-SA 452

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
             + +         T I +   DG   A+V +         KK
Sbjct: 453 GGSLVRSVETAPPGTEIQVRLADGSLAAVVGSVNHAGRGKRKK 495


>gi|220916327|ref|YP_002491631.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954181|gb|ACL64565.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 542

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 145/515 (28%), Positives = 232/515 (45%), Gaps = 58/515 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V EL+  LK  +E     V V GE++  R   +SGH YFSLKD+ + I A++W    
Sbjct: 76  PYTVRELTRALKSAIEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 134

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P EG+E L  G +  +P   KYQ++++ L P G+G     L++ K++L  EGL 
Sbjct: 135 RRLAFAPGEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQAEGLL 194

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+PF+P  + V TSPTGA +RD+L+ +  RFP   V+I P +VQG+     + +
Sbjct: 195 DPARKRPLPFLPARVGVATSPTGAALRDLLRVLHARFPGAPVLIAPCRVQGEGAAATVIS 254

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  L            D++++ RGGGS EDLW FNDE + RAIA   +P++SA+GHE D
Sbjct: 255 AVRALCRA-------GVDVVVVTRGGGSQEDLWAFNDERLARAIAACPVPVVSAVGHEVD 307

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD+RA TPT AA++ VPV++ L   +  L ARL       ++ +  TL +L  
Sbjct: 308 VTVADLVADVRAATPTHAAQLVVPVRDELVERVAALRARLARAQAGAVEGRRRTLRALRA 367

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    LS  R+RLD L    E  +     R+    + +  R+        ++  R  
Sbjct: 368 ELADPKHLLSRERHRLDDLAHRAEAAVRGPRRRERAALDALRGRLTRLEPRARVRALRAR 427

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +    + +        R   +                                R+E    
Sbjct: 428 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 452

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                           L+       L RG+      + + + +  +      + +   +G
Sbjct: 453 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSADAQVGDGVRVALAEG 499

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527
             +A +  +    + P         + E+ G  GE
Sbjct: 500 WLDARITGRDAGDD-PLPGRSGPAGEPERPGHGGE 533


>gi|227550444|ref|ZP_03980493.1| Exodeoxyribonuclease VII [Enterococcus faecium TX1330]
 gi|257897153|ref|ZP_05676806.1| exonuclease VII [Enterococcus faecium Com12]
 gi|293377378|ref|ZP_06623582.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           PC4.1]
 gi|227180345|gb|EEI61317.1| Exodeoxyribonuclease VII [Enterococcus faecium TX1330]
 gi|257833718|gb|EEV60139.1| exonuclease VII [Enterococcus faecium Com12]
 gi|292644070|gb|EFF62176.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           PC4.1]
          Length = 453

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 145/507 (28%), Positives = 246/507 (48%), Gaps = 61/507 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IA++TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +  I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVHQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    I+
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPIY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           + I++ DG     V      +++  K 
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGEKKYGKS 451


>gi|332283949|ref|YP_004415860.1| exodeoxyribonuclease VII large subunit [Pusillimonas sp. T7-7]
 gi|330427902|gb|AEC19236.1| exodeoxyribonuclease VII large subunit [Pusillimonas sp. T7-7]
          Length = 444

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 132/492 (26%), Positives = 215/492 (43%), Gaps = 57/492 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                   +VS+L+  +  ++ S+ S + VRGE+S +    +SGH YFS+KD  + + A+
Sbjct: 2   PPDTDGVLTVSQLNRRVGDLLSSHFSRIWVRGEVSNFT-QAASGHWYFSVKDEGAAVRAV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G    + F+P+ G +F     +T +     YQ+ +ESL  +G G L  A    K KL
Sbjct: 61  MFRGRAQAVGFVPKPGEKFEFRVNVTLYEPRGDYQVQVESLRRAGRGDLHEAFLILKDKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF    K P+  +P+ I V+TS   A +RD+L  ++ R P + VII+P  VQG + 
Sbjct: 121 EAEGLFDPARKRPVKALPQAIGVVTSLAAAALRDVLSALARRAPHVSVIIYPAPVQGLDA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q     E       D ++L RGGGS+EDLW FNDE + R IA S IP+IS 
Sbjct: 181 AGRLNQALQQAIQRNE------VDTLLLVRGGGSLEDLWSFNDEALARTIAASPIPVISG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ AD+RAPTPT AAE+    ++   S++    A L    +R ++     
Sbjct: 235 VGHETDFTIADFVADVRAPTPTAAAELCCRSRQSCTSAVDAALATLAARQMRNLERSALR 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L+  +  L +  Q L     RL  L + L          +      +  R+         
Sbjct: 295 LDRAVALLVSPQQRLRQQGERLQTLVQRLAQAPARPHEARAARLAMLSARLTHASP--RP 352

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              R  +  + + +                                              
Sbjct: 353 AGLRSDVAAQARRLAAE------------------------------------------- 369

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +E  L  +       ++ + + LQ+      L+RGY  ++  N   +    +L     + 
Sbjct: 370 LERGLERR----QQRLAASMQTLQALNPHKILERGYAIVRKDNGEVVKNALDLNVGESLN 425

Query: 487 INFFDGQANAIV 498
           +    G     V
Sbjct: 426 VELGRGSVRVSV 437


>gi|107023481|ref|YP_621808.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia AU
           1054]
 gi|116690564|ref|YP_836187.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia
           HI2424]
 gi|105893670|gb|ABF76835.1| Exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia AU
           1054]
 gi|116648653|gb|ABK09294.1| Exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia
           HI2424]
          Length = 460

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 138/506 (27%), Positives = 233/506 (46%), Gaps = 60/506 (11%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PFS   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 5   SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 64  QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P
Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG    +++  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAIA 
Sbjct: 184 APVQGAGSAEKLVAAVATANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P +  L   +   +  L   + R
Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L+ L + L +  + L   R  + +L   L       +      F        
Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVQQLAARLASAASRPVRDARARFA------- 350

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                                + Q+  Q  R    + +  +A L         R     T
Sbjct: 351 ---------------------LAQLRWQRARPDASQARHALAGLSQRLASALQRRHERDT 389

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477
                                  VS     L+  + + TL+RGY ++ D      +    
Sbjct: 390 ---------------------ARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPN 428

Query: 478 NLATKTRILINFFDGQANAIVINKAP 503
            L  + R+ ++  +G A+  + +  P
Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454


>gi|315658201|ref|ZP_07911073.1| exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis
           M23590]
 gi|315496530|gb|EFU84853.1| exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis
           M23590]
          Length = 445

 Score =  327 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 154/492 (31%), Positives = 231/492 (46%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD +S I A+++KG 
Sbjct: 5   LSVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-RHSSGHLYFNVKDQNSVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             KI F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EGL
Sbjct: 64  AAKINFDPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQRLEELKKKLTKEGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  Q+K  IP  PK IA++T+ TGA IRDI   I  R+P +  I     VQG +  ++I 
Sbjct: 124 FDQQYKKSIPKYPKKIAILTASTGAAIRDIQTTIESRYPLVEKIPISTLVQGTQAKQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIRYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVRAIYNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + I+     L  + 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYDLMQQIKQQQFTLTRYIRQRIEQHRKQLQHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L        + +  +           ++      NI+  
Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLE-------KQLNLKIITKLKEQKQNLQIIQQRFNIKNF 349

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +QHIL +Q+   Q+     + I  + K+   +                            
Sbjct: 350 KQHILTEQRQTNQLETNLTKIIQHQLKQFSTL---------------------------- 381

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                       +      L   +  NT+ RGY+ I   +N  +T   +L     I +N 
Sbjct: 382 ------------LHNQVEQLNHLSPTNTMLRGYSII-HKDNQVVTSTHDLTVNDDITLNM 428

Query: 490 FDGQANAIVINK 501
            DGQ  A +   
Sbjct: 429 KDGQVEATIKKV 440


>gi|289550705|ref|YP_003471609.1| Exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180237|gb|ADC87482.1| Exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis
           HKU09-01]
          Length = 445

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 155/492 (31%), Positives = 231/492 (46%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD +S I A+++KG 
Sbjct: 5   LSVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-RHSSGHLYFNVKDQNSVISAMMFKGN 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             KI F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +EGL
Sbjct: 64  AAKINFDPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQRLEELKKKLTKEGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  Q+K  IP  PK IA++T+ TGA IRDI   I  R+P +  I     VQG +  ++I 
Sbjct: 124 FDQQYKKSIPKYPKKIAILTASTGAAIRDIQTTIESRYPLVEKIPISTLVQGTQAKQDII 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   ++L         D II+ RGGGSIEDLW+FN+E +VRAI N   PIISA+GHET
Sbjct: 184 EKIRYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVRAIYNCQTPIISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+AAD+RA TPT AA +A P +  L   +   +  L   I + IK     L  + 
Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYDLMQQIKQQQFTLTRYIRQRIKQHRKQLQHIS 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            R D L        + +  +           ++      NI+  
Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLE-------KQLNLKIITKLKEQKQNLQIIQQRFNIKNF 349

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +QHIL +Q+   Q+     + I  + K+   +                            
Sbjct: 350 KQHILTEQRQTNQLETNLTKIIQHQLKQFSTL---------------------------- 381

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                       +      L   +  NT+ RGY+ I   +N  +T   +L     I +N 
Sbjct: 382 ------------LHNQVEQLNHLSPTNTMLRGYSII-HKDNQVVTSTHDLTVNDDITLNM 428

Query: 490 FDGQANAIVINK 501
            DGQ  A +   
Sbjct: 429 KDGQVEATIKKV 440


>gi|149922023|ref|ZP_01910464.1| exodeoxyribonuclease VII, large subunit [Plesiocystis pacifica
           SIR-1]
 gi|149817075|gb|EDM76556.1| exodeoxyribonuclease VII, large subunit [Plesiocystis pacifica
           SIR-1]
          Length = 444

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 125/489 (25%), Positives = 212/489 (43%), Gaps = 52/489 (10%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           ++VSE        +E +++ + V GE+S    +  SGHAYF+LKD    +   +W  ++ 
Sbjct: 2   FAVSEAVELAHRTLEQHIAGLWVEGEVSNLV-LPRSGHAYFTLKDGRGALPTAMWATSVR 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++ F  +EG    V G++  +    ++Q+  E   P G G L  ALE+ K+KL +EGLF+
Sbjct: 61  RLRFRLQEGQRLRVFGRMGIYAAQGRFQLYAERAEPVGVGELALALEQLKRKLHDEGLFA 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
           +  K P+P  P+ I V+TSP GA + DI++ +  R P  +++ P KVQG E P E+  A+
Sbjct: 121 EARKRPLPAWPRGIGVVTSPNGAAVHDIIKVVRRRMPTPILLSPAKVQGPEAPYELIAAL 180

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
                L         ++IIL RGGGS+EDLW FN E + RA+ +  +P++SA+GHE D T
Sbjct: 181 RL---LARAAEARDIEVIILGRGGGSMEDLWAFNHEGLARAVVDCPVPVVSAVGHEVDVT 237

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           + D  AD RA TP+ A E+ VP +  L +     + R+   I R        L+   + L
Sbjct: 238 VCDLVADRRAATPSQAGELVVPDRRELAARFDEYQRRMVRNIERRTVDLGARLHGGSRRL 297

Query: 315 PNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                  +   R +L+     L   +   +    R    +  R+ +      + + R+ +
Sbjct: 298 ERWGRSWVREQRGQLEHSHARLLVEVRGALEADRRRHRALAERLAAVDPRVRVAQQRRAL 357

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E ++ + +                                                   
Sbjct: 358 HELERRLIR-----------------------------------------------AGRS 370

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                   ++     L + +    L RGY   +D     I +   +     + +   +GQ
Sbjct: 371 MTAELRPRLARAAGKLDALSPLAVLGRGYALARDEGGRVIRKASEVEVGDAVSLRLSEGQ 430

Query: 494 ANAIVINKA 502
            +  V +KA
Sbjct: 431 LSVEVRSKA 439


>gi|223937606|ref|ZP_03629509.1| exodeoxyribonuclease VII, large subunit [bacterium Ellin514]
 gi|223893769|gb|EEF60227.1| exodeoxyribonuclease VII, large subunit [bacterium Ellin514]
          Length = 469

 Score =  326 bits (835), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 126/495 (25%), Positives = 232/495 (46%), Gaps = 55/495 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VSE++  +K ++E  +  V V GE++ +R   SSGH YF++KD  S++  ++++   
Sbjct: 23  VLTVSEVTSKVKGLLERQIGQVWVTGEVTNFRAQ-SSGHFYFTIKDVESQLSCVLFRNDA 81

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
                  ++G + ++ G++T +    +YQ+ + ++   G G L  A EK K+KL  EGLF
Sbjct: 82  RDSRNFIQDGRKVILQGELTVYVPRGQYQMRVTAVELQGVGALQAAFEKLKQKLNTEGLF 141

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K  +P  P+ I ++TSPTGA IRD+L  I  R P L +I+ P +VQG    +EIA 
Sbjct: 142 AQERKRALPRFPQCIGIVTSPTGAAIRDVLHVIQRRNPALEIILAPCRVQGQGAAEEIAA 201

Query: 193 AIL---QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +I    + N+     +    D+I++ RGGGS+EDLW FN+E++ RAI  S +P++SA+GH
Sbjct: 202 SIRLLNEWNSKMSPASGQPLDLILITRGGGSLEDLWAFNEEVVARAIFESQLPVVSAVGH 261

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T++D+ AD RA TP+ AAE+           L  + AR+  +  + ++ K   +  
Sbjct: 262 EIDFTISDFVADFRAATPSAAAEIITQDVVASCQFLSAVNARMRELFRQRLEDKEYEMVH 321

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           LL+ L   +  + ++     LD L   L    +  +  +   + ++  R++       ++
Sbjct: 322 LLQRLQRTHPSRRVNEFLQHLDDLRSSLLRCAKHGVRNQQTDWRNLFERLQRVRPRQLLK 381

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R+ + + Q  +                                      H++   +R 
Sbjct: 382 QRRELLNQAQNRLH--------------------------------EQAGHHLQNCQSR- 408

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRIL 486
                         ++     L+    +  L RGY+   D      I   + +    ++ 
Sbjct: 409 --------------LATLNARLRLLGPEQVLARGYSITLDAETGALIYSDKQVRAGQKLK 454

Query: 487 INFFDGQANAIVINK 501
                G+  + V + 
Sbjct: 455 TRLKTGEVRSTVDDG 469


>gi|103488581|ref|YP_618142.1| exodeoxyribonuclease VII large subunit [Sphingopyxis alaskensis
           RB2256]
 gi|98978658|gb|ABF54809.1| Exodeoxyribonuclease VII large subunit [Sphingopyxis alaskensis
           RB2256]
          Length = 475

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 163/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                  + P  SVS+LS  +K  VE   + V VRGE+SG +   +SGH Y +LKD+++ 
Sbjct: 20  AEAAPGDNVPPLSVSQLSAAIKRTVEDGFARVRVRGELSGAK-RAASGHFYAALKDDNAL 78

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKG   ++ F PE+GIE +  GK+TT+PG SKYQ+++ESL  +G G L+   EK 
Sbjct: 79  IDMVMWKGQAARLAFRPEDGIEVIATGKLTTYPGRSKYQLVVESLEVAGEGALMLLFEKL 138

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           K +L  EGLF    K P+P++P+ I V+TSPTGAVIRDIL R++ R P  VI++PV VQG
Sbjct: 139 KARLGGEGLFDRDRKQPLPYLPRTIGVVTSPTGAVIRDILHRLADRCPSHVIVWPVLVQG 198

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +    ++A AI   + L  G    RPD++I+ARGGGSIEDLW FN+E++VRAIA+  IP 
Sbjct: 199 EGAAAQVAAAIRGFDALAPGGKVARPDLVIVARGGGSIEDLWAFNEEVVVRAIADCRIPT 258

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TLADYAAD+RAPTPT AAEMAVPV+  LQ+ L     R+     R    +
Sbjct: 259 ISAVGHETDVTLADYAADMRAPTPTAAAEMAVPVRAELQAQLATWGGRMIGAANRQQALR 318

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L +L + LP  D   +  R RLD +   L       +             ++   L 
Sbjct: 319 GERLTALARHLPRRDALYAPQRQRLDDVGERLGRGQRQRLAMLGERLGARGAALRPALLA 378

Query: 364 HNIQKNRQHILEKQQHIEQI 383
               ++R  +    + +  +
Sbjct: 379 RAWDRDRAKLDGLGRLLASL 398



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 5/205 (2%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           D                       +  ++ +         NRQ  L + + +  + +   
Sbjct: 272 DYAADMRAPTPTAAAEMAVPVRAELQAQLATWGGRMIGAANRQQAL-RGERLTALARHLP 330

Query: 389 RYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSI 444
           R   L    ++    +   L    + R+  L   +      +   L +         +  
Sbjct: 331 RRDALYAPQRQRLDDVGERLGRGQRQRLAMLGERLGARGAALRPALLARAWDRDRAKLDG 390

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
             R+L S   +  L RGY  ++D     +T          + + F DG+    V     P
Sbjct: 391 LGRLLASLDPRALLSRGYAMVRDAGGAIVTSAAKARDAGHLRLQFADGELPVTVGEGGDP 450

Query: 505 KEQPTKKCQLHNNKREKQGTQGELF 529
                 +     +    +  QGELF
Sbjct: 451 APSSGPRPARKASPSAPKAGQGELF 475


>gi|323700411|ref|ZP_08112323.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. ND132]
 gi|323460343|gb|EGB16208.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 496

 Score =  325 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 133/526 (25%), Positives = 220/526 (41%), Gaps = 62/526 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               +VSEL+  +K ++E+    V VRG++S      +SGH YF+L D  + +  + +K 
Sbjct: 2   SNILTVSELTKSVKALLEAEFPFVWVRGQVSNL-ARPASGHVYFTLTDGDAALSVVWFKS 60

Query: 72  TLNKIEFL---------------------------PEEGIEFLVIGKITTFPGSSKYQII 104
           +    E +                            E+G+E L  G++  +    +YQ++
Sbjct: 61  SQRSAEPVRQGGDMVNPLTGEIEETEGGTALTGSGLEDGLEVLCAGRLNVYEPRGQYQLV 120

Query: 105 IESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164
            E +   G G L  A E  KKKL E+G F +  K  +P  P+ +AVITS +GA IRD L+
Sbjct: 121 AELVQARGVGDLAVAFEALKKKLAEKGYFDEDRKLGLPRDPRRVAVITSKSGAAIRDFLR 180

Query: 165 RISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223
               R     + I+PV VQGD  P +IA A+  ++           ++ +L RGGGS+ED
Sbjct: 181 IADTRGTGAEIRIYPVLVQGDRAPGQIAAALDLVDAEGWA------EVAVLIRGGGSLED 234

Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283
           LW FN E +  AI  + +P+++ +GHE D ++AD+ AD RA TP+ AA+   P +E L  
Sbjct: 235 LWAFNTEAVADAIYRARLPVLTGVGHEPDVSIADFVADKRAATPSHAAQELWPRRETLAQ 294

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEI 341
            +  L+  LN      +  K      L KAL   +  + L     R   L   L+     
Sbjct: 295 RVDALDLGLNRAYEGWLSDKAGAFEQLRKALVWLSPARRLERMEDRFSALMARLQGAGLD 354

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
             F +          +   F  H +    +      + +E+                   
Sbjct: 355 HYFDRAGETVRAAEGLDRAFGTHRLDGLSRDAAGLARRLERAFGP--------------- 399

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
                     R+  L   +  L  R+      ++      +++    L+    +  L+RG
Sbjct: 400 ---------ERVDRLAEGVAGLGQRLTSSGQGRLDGMAQRLAVLETGLRGLDPEGPLERG 450

Query: 462 YTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           Y  ++      F+   R +     + I   DG+  A V +  P +E
Sbjct: 451 YALVRVAGTGEFLRDPRRVTKGDALDITVRDGRVAATVTDTRPNEE 496


>gi|53725862|ref|YP_103835.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei ATCC
           23344]
 gi|67641289|ref|ZP_00440071.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei GB8
           horse 4]
 gi|124385302|ref|YP_001027030.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei NCTC
           10229]
 gi|126448505|ref|YP_001081679.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei NCTC
           10247]
 gi|134279594|ref|ZP_01766306.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           305]
 gi|254196541|ref|ZP_04902965.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           S13]
 gi|254202540|ref|ZP_04908903.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei FMH]
 gi|254356227|ref|ZP_04972503.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei
           2002721280]
 gi|52429285|gb|AAU49878.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei ATCC
           23344]
 gi|124293322|gb|ABN02591.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei NCTC
           10229]
 gi|126241375|gb|ABO04468.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei NCTC
           10247]
 gi|134248794|gb|EBA48876.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           305]
 gi|147746787|gb|EDK53864.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei FMH]
 gi|148025224|gb|EDK83378.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei
           2002721280]
 gi|169653284|gb|EDS85977.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei
           S13]
 gi|238522198|gb|EEP85644.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei GB8
           horse 4]
          Length = 460

 Score =  325 bits (834), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 130/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F+ +  R +      +  + RQ + 
Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +                         + RI      +              
Sbjct: 372 AFAQRLDATL-------------------------QRRIERDTARV-------------- 392

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                   +     L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 393 --------AACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|254446514|ref|ZP_05059990.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobiae bacterium
           DG1235]
 gi|198260822|gb|EDY85130.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobiae bacterium
           DG1235]
          Length = 460

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 137/499 (27%), Positives = 230/499 (46%), Gaps = 57/499 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           D P  SV++ +  +K ++E N+    V GE+S  R   +SGH YFSLKD  S+I A++++
Sbjct: 9   DLPRVSVTKYTAAIKKLLEGNIPPCWVVGEVSNLR-RQASGHIYFSLKDAGSQIPAVMFR 67

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G  ++++F P +G++ L  G+I+ +    +YQ++I  L  SG G L    E+ K+KL +E
Sbjct: 68  GQASRLKFAPADGMQVLAFGEISVYEPYGRYQLVIRELKESGEGRLFREFERLKRKLADE 127

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKE 189
           GLF  + K  IP  P  +A++TSPTGA ++D ++ +  R +   + +FP KVQG    +E
Sbjct: 128 GLFDSERKRAIPNFPLRVAIVTSPTGAALQDFIRILKRRGWGGGLHVFPAKVQGVGSAEE 187

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I +AI  +N L         D++++ARGGGSIEDLW FN+E + RA+A S +P+IS +GH
Sbjct: 188 IESAIRYVNEL------GVYDLLVVARGGGSIEDLWSFNEERVARAVAESEVPVISGVGH 241

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+TL+D+AAD RA TP+  AEM                  L+++ +  +  +   L+ 
Sbjct: 242 EIDFTLSDFAADARAETPSAVAEMISSAYLETIERYRTAREALDSLAVEGLAERELALDR 301

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L   +    L  +  R+D L           +  +   F                 
Sbjct: 302 LRRELKSVSPVAALERAFLRIDELGTRFLSAYRTSVQERRNVFQG--------------- 346

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                                                L +     +  L   + +L  R+
Sbjct: 347 --------------------------------KERRYLAQDVSGAVLRLRDRLDRLERRM 374

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           +  L   +    + + +    L++     TLKRGY  ++D +   +T+         ++ 
Sbjct: 375 DGCLMAGVAELRSRLDVAGATLKAIGPAATLKRGYAILEDASGKPLTRIAATQRGAAVVA 434

Query: 488 NFFDGQANAIVINKAPPKE 506
           +  DG+    V        
Sbjct: 435 SLSDGRLEMTVDAVDAAPS 453


>gi|78067344|ref|YP_370113.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. 383]
 gi|77968089|gb|ABB09469.1| Exodeoxyribonuclease VII large subunit [Burkholderia sp. 383]
          Length = 460

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLESEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG     ++  A+
Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSADKLVTAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T
Sbjct: 200 ETANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AADLRAPTPTGAAE+A P +  L   +   +  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVGERQRALARGMERRLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  +++L   L       +      F     R +      +  + RQ + 
Sbjct: 314 VSPAERLQRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPSQARQALA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   +                         + R       +     R        
Sbjct: 372 GLSQRLALAL-------------------------QRRHERDTARVSACAAR-------- 398

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                         L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRTPNALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|83719967|ref|YP_441299.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           E264]
 gi|83653792|gb|ABC37855.1| exodeoxyribonuclease VII, large subunit [Burkholderia thailandensis
           E264]
          Length = 561

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 129/490 (26%), Positives = 224/490 (45%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 122 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 180

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 181 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 240

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K  +P  P+ I V+TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 241 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 300

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 301 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 354

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 355 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDARAQQLDWLARRL 414

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L      + +L   L       +      F  +  R +      ++   RQ + 
Sbjct: 415 ISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARP--DVAPARQVLA 472

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q ++  +                         + R+      +              
Sbjct: 473 TLAQRLDATL-------------------------RRRVERDTARV-------------- 493

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                   +     L+  + + TL+RGY   I       +     L  + R+ ++  +G 
Sbjct: 494 --------AACAARLEVLSPQRTLERGYAALIDTQTGRAVRAPAALKPQRRLTVHLAEGS 545

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 546 ADVSLADVQP 555


>gi|302387569|ref|YP_003823391.1| exodeoxyribonuclease VII, large subunit [Clostridium
           saccharolyticum WM1]
 gi|302198197|gb|ADL05768.1| exodeoxyribonuclease VII, large subunit [Clostridium
           saccharolyticum WM1]
          Length = 441

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 125/496 (25%), Positives = 226/496 (45%), Gaps = 79/496 (15%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV++++ ++K++   +   + + ++GE+S  +  H+SGH YF+LKD  S + A+++ G
Sbjct: 4   VYSVTQVNAYIKNMFAQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDGTSSMAAVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  EEG + +  G +  +    +YQ+  + +   G G L    +K + +L E G
Sbjct: 63  HRKGLAFRLEEGQQVVAKGSVEVYERDGRYQLYAQEITKEGIGDLFERFQKLRDELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +FS ++K PIP   K + ++T+PTGA IRDI+   + R P +++ ++P  VQG+   + I
Sbjct: 123 MFSPEYKKPIPKYAKTVGIVTAPTGAAIRDIMNISARRNPYVQLYLYPALVQGENAKESI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+ +         D++I+ RGGGSIEDLW FN+E + RA+ N + P+ISA+GHE
Sbjct: 183 GKGIRILDQM-------GLDVLIVGRGGGSIEDLWAFNEEAVARAVFNCTTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ DY AD+RAPTP+ AAE+AV                                   
Sbjct: 236 TDVTITDYVADMRAPTPSAAAELAVFDYG------------------------------- 264

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                         + +       L   +E  + R   H N    ++K       I ++R
Sbjct: 265 ------------LFQEQTGLYGNTLLRTMERKLERCRYHGNQYALKLKLFDPKRRIHESR 312

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +++ +  ++ ++                          +R     +  ++   R++ +
Sbjct: 313 QRLVDIEDKLKSLIL-------------------------SRTAAERSRAEESRFRMQQL 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +       + +    L + +    +  GY  + D  +  I   + L T  RI +   
Sbjct: 348 IEKQAVRDRHRLELLISRLDARSPLKRIGGGYGYVTDEKDKRIDSVKQLHTGDRIGVRLR 407

Query: 491 DGQANAIVINKAPPKE 506
           DG   A++ + A  K 
Sbjct: 408 DGGIEAVISSIARAKS 423


>gi|299822997|ref|ZP_07054883.1| exodeoxyribonuclease VII large subunit [Listeria grayi DSM 20601]
 gi|299816526|gb|EFI83764.1| exodeoxyribonuclease VII large subunit [Listeria grayi DSM 20601]
          Length = 446

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 149/495 (30%), Positives = 238/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              SV  L+ +++   +++  L HV V+GEIS  +   +SGH YF++KD+ + I  +++ 
Sbjct: 5   KYLSVIALTKYIERKFDADPYLKHVYVKGEISNLK-KPASGHIYFTVKDDLAMIRCVMFA 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
            ++ K+ F PE+G+   + G++  F  + +YQ   E + P G G L   LE+ K KL EE
Sbjct: 64  KSVAKLGFDPEDGMNIRLQGRVNVFTKAGRYQFYAEEMEPDGVGALYVKLEQLKSKLTEE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+D HK P+P  P  +AV+TS TGA IRD++  I  R P  +++++P  VQGD   K 
Sbjct: 124 GLFADSHKKPLPLFPAKVAVVTSRTGAAIRDVITTIQRRMPTTQILVYPTVVQGDHAGKT 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D+II  RGGGS+E+LW FN+E +VRA+ +S IPIISA+GH
Sbjct: 184 IVANIERINQR------NDIDVIITGRGGGSLEELWAFNEEPVVRAVYHSDIPIISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L D+AAD+RA TPT AAE+AVP +  L+  L+    RL N + R+++ K   +  
Sbjct: 238 ETDFALTDFAADVRAATPTAAAELAVPDQRDLKERLLERHYRLVNQMNRVVERKEVQMKR 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L      + +     ++D     L   L   + +K   +  +  RI+   L  +I+
Sbjct: 298 LQDRLKLLTPKRQMEQQAEKIDYFSERLVRALRTQVTQKRTDWQQLAYRIEHVELAKDIR 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             R+ +  ++Q +++ ++  +          +                            
Sbjct: 358 AERERLELREQSLKRALRTQIDRKRESFFRHVQA-------------------------- 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +    +KRGY          I   + L      L+
Sbjct: 392 ---------------------LEHLSPLALIKRGYALPY-KEGQVIRSAKELTVGDSFLL 429

Query: 488 NFFDGQANAIVINKA 502
              DGQ  A V  K 
Sbjct: 430 KLQDGQIKAEVTAKE 444


>gi|332977567|gb|EGK14337.1| exodeoxyribonuclease VII large subunit [Desmospora sp. 8437]
          Length = 456

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 145/494 (29%), Positives = 232/494 (46%), Gaps = 60/494 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    +V+ L   L  ++E +  LS + V+GEIS ++  H  GH YF+LKD+ +RI A++
Sbjct: 5   EQDVLTVTGLVQRLTQVIEEDPGLSRIWVQGEISNFKH-HGRGHMYFTLKDDQTRIRAVM 63

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           + G   ++ F+P++G + L+ G++  F    + Q+ +  + P+G G L  A ++ K+KL 
Sbjct: 64  FAGNNRRLRFMPKDGDDVLIRGRVGVFERDGQTQLYVTHMQPNGVGELYVAFQQLKEKLN 123

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
           EEGLFS   K  +PF P+ + V+TS  GA +RDI+  I  R   + ++++PV VQG + P
Sbjct: 124 EEGLFSPTLKKGLPFFPRCVGVVTSAHGAAVRDIITTIRRRSRGVDILLYPVPVQGPQAP 183

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            EIA A+ QLN   E       D+II+ RGGGS+E+LW FN+E++ R+I  S IP++SA+
Sbjct: 184 LEIAQALDQLNQAGE------VDVIIVGRGGGSLEELWAFNEEVVARSIHQSRIPVVSAV 237

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ AD+RA TPT AAEM VP  E LQ  L  ++ RL   + + +      L
Sbjct: 238 GHETDTTIADFVADVRAATPTAAAEMIVPRLEELQIGLKAVQERLTKGMKQCLTDGRVRL 297

Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N  L    L      L  +  RLD L  +L                    R+K       
Sbjct: 298 NRSLDRPVLRRPATGLEQAEQRLDILTGDLVRAAREGFAPVRSRLESRTYRLKGHHPALR 357

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + ++ ++  Q+  +  +                                        T
Sbjct: 358 VPRLKERLVRLQRQSKVGM----------------------------------------T 377

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTR 484
           R+              V      L + +    + RGY+ +   +    I     +     
Sbjct: 378 RLLREHRR---RWQGRVEH----LDALSPLKVMSRGYSLLYRYDGQELIKSVEQVQAGDL 430

Query: 485 ILINFFDGQANAIV 498
           + I   DG+    V
Sbjct: 431 VRIRLSDGRLKCQV 444


>gi|241894942|ref|ZP_04782238.1| exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313]
 gi|241871660|gb|EER75411.1| exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313]
          Length = 420

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 137/491 (27%), Positives = 215/491 (43%), Gaps = 80/491 (16%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS L+ +LK     +  L  V V GEIS YR     GH YF +KD+ + + A ++K  
Sbjct: 5   LTVSALTAYLKRKFTADPYLKKVYVTGEISNYRQRP--GHQYFKIKDDQAVVSATMFKSA 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            ++++F  E G++  V G +  +  +  Y +IIE++ P G G L  A E+ K+KL +EGL
Sbjct: 63  FSRLKFQLEPGMKVNVTGHMDLYAPNGSYSLIIETIEPDGVGALYQAYEQLKEKLEKEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    +  IP  P+ IAVITSP+GAVIRDI+  +  R+P+  ++++P  VQGD     + 
Sbjct: 123 F-QARQAKIPLFPRKIAVITSPSGAVIRDIMTTVQRRYPIAEIVLYPAVVQGDGAVPSLC 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I  +N   +       D++I+ RGGGSIEDLW FNDE + R +    IP+IS++GHET
Sbjct: 182 QQIDAVNQSSD------YDVLIIGRGGGSIEDLWAFNDEKLARQLLTVKIPVISSVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+AD+ AD RA TPT AAE+A P                                   
Sbjct: 236 DTTIADFIADKRAATPTAAAELATP----------------------------------- 260

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L +    +   + +L          L+  I ++  + + +             +   Q
Sbjct: 261 MPLADLWLAIQQDQQKL-------VMILQREIAQRKDYLSRLQQSYVLTNPERLYEGYLQ 313

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +   Q  + +                             +I      +  L  R++  +
Sbjct: 314 RLDIAQDKLIRTASL-------------------------QINQQKQQVATLKPRLKMSM 348

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            H++K            LQ  +    L RGY+ +    +  + Q   +A    I I   D
Sbjct: 349 DHEMKQAQQRFGQAAAGLQLVSPLAILARGYS-VTKKESEVVRQLDQVALDDNISIQVSD 407

Query: 492 GQANAIVINKA 502
           G+  A V  K 
Sbjct: 408 GEILARVTEKK 418


>gi|115352643|ref|YP_774482.1| exodeoxyribonuclease VII large subunit [Burkholderia ambifaria
           AMMD]
 gi|115282631|gb|ABI88148.1| Exodeoxyribonuclease VII large subunit [Burkholderia ambifaria
           AMMD]
          Length = 460

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDGQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T
Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AADLRAPTPTGAAE+A P +  L   + + +  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  +++L   L       +      F     R +      +  + R  + 
Sbjct: 314 VSPAERLRRQRIHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   +                         + R       +     R        
Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                         L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G 
Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSSLKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|238028444|ref|YP_002912675.1| exodeoxyribonuclease VII large subunit [Burkholderia glumae BGR1]
 gi|237877638|gb|ACR29971.1| Exodeoxyribonuclease VII large subunit [Burkholderia glumae BGR1]
          Length = 466

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 136/490 (27%), Positives = 225/490 (45%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +     V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 27  PVSALNRAIGSMLERSFPLCWVSGEVSNFT-RAASGHWYFSIKDKDAQMRCVMFRGRAQH 85

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
             F P EG    V   ++ +    + Q+ +E++  +G G L  A  + K +L  EGLF  
Sbjct: 86  APFTPREGDRIEVRALVSMYEPRGEVQLNVEAVRRTGQGKLFEAFLRLKAQLESEGLFDP 145

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           Q K P+P  P+ I ++TS   A +RD+L  ++ R P L VI++P  VQG    +++A  +
Sbjct: 146 QRKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHLPVIVYPAPVQGSGAAEKLAAMV 205

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S++P++S +GHETD+T
Sbjct: 206 ETANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASALPVVSGVGHETDFT 259

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AADLRAPTPTGAAE+  P +  L   L   +A L   + R +  +   L+ L + L
Sbjct: 260 IADFAADLRAPTPTGAAELVSPQRALLLRELAERQAALARGLRRGLDARAQQLDWLARRL 319

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L+  R  L +L   L       +      F  +   ++   +  +    RQ + 
Sbjct: 320 VSPAERLARQRTHLQQLALRLASAGARPVRDARARFALV--MLRWQRVRPDAAAARQALA 377

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   ++                                                 
Sbjct: 378 GWSQRLATALRHRHERAA------------------------------------------ 395

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                  VS     L+  + + TL+RGY   I       +     LA + R+ ++  +G 
Sbjct: 396 -----ARVSGCAARLEVLSPQRTLERGYAALIDTQTGRAVRAPGALAPQRRLTVHLAEGT 450

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 451 ADVSIADVQP 460


>gi|73540302|ref|YP_294822.1| exodeoxyribonuclease VII large subunit [Ralstonia eutropha JMP134]
 gi|123732989|sp|Q475F5|EX7L_RALEJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|72117715|gb|AAZ59978.1| Exodeoxyribonuclease VII large subunit [Ralstonia eutropha JMP134]
          Length = 448

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 139/502 (27%), Positives = 223/502 (44%), Gaps = 59/502 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
              +N  +     V EL++ +  ++E       VRGEIS +    +SGH YFSLKD  ++
Sbjct: 1   MPARNPREA--IPVGELNHAIATMLERGFPLTWVRGEISNFT-RAASGHWYFSLKDARAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I  ++++G    ++F P EG    V   +T +      Q+ +E++  +G G L  A  + 
Sbjct: 58  IRCVMFRGRNQHVDFTPREGEAVEVRAVVTLYEARGDLQLGVEAMRRAGLGNLYEAFLRL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQ 182
           K+KL + GLF+ + K P+P  P+ I ++TS   A +RD+L  +  R   + V ++PV VQ
Sbjct: 118 KEKLAQAGLFAPERKRPVPSHPRSIGIVTSLQAAALRDVLTTLRRRAPHVPVTVYPVPVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    ++IA+ + Q +  +E       D+IIL RGGGSIEDLW FN+E +  AIA S++P
Sbjct: 178 GAGAAQKIADMLDQASARRE------CDVIILCRGGGSIEDLWSFNEEAVAHAIARSAVP 231

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++S +GHETD+T+AD+ AD+RAPTPTGAAE+  P + HL          L   + R +  
Sbjct: 232 VVSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRGHLLGLTRRAGDALVQSMRRELDR 291

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +   L+ L + + +    L   R R+D L R L   L   +  +                
Sbjct: 292 RAQHLDWLARRVRSPLAQLQERRARVDNLARHLRSALRETVVAQRHR------------- 338

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
                          Q +  I     R         +A L    +    R     T    
Sbjct: 339 ---------------QQLLAIRWTACRPDMAAASADVARLSQRMQAAATRTHERQTQ--- 380

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
                              ++     L+  A + TL+RGY  + D     +     L   
Sbjct: 381 ------------------RLARVAGALELLAPQRTLERGYAVLLDQRGRALRSPAELRAG 422

Query: 483 TRILINFFDGQANAIVINKAPP 504
           + +  +  DG A+  +      
Sbjct: 423 SVVEAHLADGVADIAIAGVQAK 444


>gi|172061504|ref|YP_001809156.1| exodeoxyribonuclease VII large subunit [Burkholderia ambifaria
           MC40-6]
 gi|171994021|gb|ACB64940.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria
           MC40-6]
          Length = 460

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 229/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T
Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AADLRAPTPTGAAE+A P +  L   + + +  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  +++L   L       +      F     R +      +  + R  + 
Sbjct: 314 VSPAERLRRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   +                         + R       +     R        
Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                         L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|170698601|ref|ZP_02889669.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria
           IOP40-10]
 gi|170136454|gb|EDT04714.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria
           IOP40-10]
          Length = 460

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  + E +   + + GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAISTMFERSFPLLWISGEVSNFT-RAASGHWYFSIKDGQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T
Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AADLRAPTPTGAAE+A P +  L   + + +  L   + R ++ +   L+ L + L
Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   R  +++L   L       +      F     R +      +  + R  + 
Sbjct: 314 VSPAERLRRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   +                         + R       +     R        
Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493
                         L+  + + TL+RGY ++ D      +     L  + R+ ++  +G 
Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 445 ADVSLADVQP 454


>gi|51473854|ref|YP_067611.1| exodeoxyribonuclease VII large subunit [Rickettsia typhi str.
           Wilmington]
 gi|81826290|sp|Q68W63|EX7L_RICTY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|51460166|gb|AAU04129.1| E.coli exonuclease VII [Rickettsia typhi str. Wilmington]
          Length = 453

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 175/485 (36%), Positives = 259/485 (53%), Gaps = 54/485 (11%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            E+SVSE+S  +K ++E+N  H+ V+GEISG +   SSGHAYF+LK+N + +    W+  
Sbjct: 12  KEFSVSEISNKIKELIENNFGHIKVKGEISGLKIS-SSGHAYFNLKENTAILACTCWRPI 70

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           L KI+F   +G+E ++ GK++++ G+S+YQ+ +++L P+G G ++  L +RK +L +EGL
Sbjct: 71  LVKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAGLGAMIQILNERKIRLEKEGL 130

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192
           F+ +   PIPF+P  I VITS TGAVI+DI+ RI  R P R+II+ V VQG+    E+A 
Sbjct: 131 FNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERCPTRIIIWQVSVQGENSSHEMAE 189

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N L+E     +P +II+ARGGGSIEDLW FNDE++VRA  NS IPIISA+GHE D
Sbjct: 190 AIEGFNNLEE---IHKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEAD 246

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TL D A D RAPTPT AAE AVPV+  L +++ + E  L N   RLIKY   ++ +  K
Sbjct: 247 YTLIDLAVDKRAPTPTAAAEFAVPVRSILNNTIQSYEKILLNNTNRLIKYHEQSIVNYDK 306

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                   ++  +  LD     L   L   I                             
Sbjct: 307 IHRYFAYYINNRQQLLDETGFNLLDVLIRCI----------------------------- 337

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                 K+ K+      R      I Y    +      +   ++
Sbjct: 338 --------------------ALKETKLKSFAKERINYAKIINYKILELTHQTAYLLKSVN 377

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           + +K+    + + + +L S  Y N LKRG+  +     NF++ K     +  + I FFDG
Sbjct: 378 NTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVTGDAGNFLSSKSTATNEQSLNIKFFDG 437

Query: 493 QANAI 497
           + N +
Sbjct: 438 EINVV 442


>gi|257888472|ref|ZP_05668125.1| exonuclease VII [Enterococcus faecium 1,141,733]
 gi|257824526|gb|EEV51458.1| exonuclease VII [Enterococcus faecium 1,141,733]
          Length = 445

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 144/501 (28%), Positives = 243/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IA++TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +  I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVHQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    I+
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPIY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|257899151|ref|ZP_05678804.1| exonuclease VII [Enterococcus faecium Com15]
 gi|257837063|gb|EEV62137.1| exonuclease VII [Enterococcus faecium Com15]
          Length = 445

 Score =  324 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IA++TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|86157520|ref|YP_464305.1| exodeoxyribonuclease VII large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85774031|gb|ABC80868.1| Exodeoxyribonuclease VII large subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 474

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 145/515 (28%), Positives = 228/515 (44%), Gaps = 58/515 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V EL+  LK  VE     V V GE++  R   +SGH YFSLKD+ + I A++W    
Sbjct: 8   PYTVRELTRALKSAVEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F P EG+E L  G +  +P   KYQ++++ L P G+G     L++ K++L  +GL 
Sbjct: 67  RRLAFAPAEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQADGLL 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+PF+P  + V TSPTGA +RD L+ +  RFP   V+I P +VQG+     + +
Sbjct: 127 DPARKRPLPFLPARVGVATSPTGAALRDFLRVLHARFPSAPVLIAPCRVQGEGAAATVIS 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  L            D++++ RGGGS EDL  FNDE + RAIA   +P++SA+GHE D
Sbjct: 187 AVRALCRA-------GVDVVVVTRGGGSQEDLGAFNDERLARAIAACPVPVVSAVGHEVD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD+RA TPT AA++ VPV++ L   +  L ARL       ++ +  TL +L  
Sbjct: 240 VTVADLVADVRAATPTHAAQLVVPVRDELLERVAALRARLARAEAGAVEGRRRTLRALRA 299

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    LS   +RLD L    E  +     R+    + +  R+        ++  R  
Sbjct: 300 ELADPKHLLSREHHRLDDLAHRAEAAVRGPRRRERAALDALRARLTRLEPRARVRALRAR 359

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +    + +        R   +                                R+E    
Sbjct: 360 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 384

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                           L+       L RG+      + + + +  +      I +   +G
Sbjct: 385 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSTDAQVGDAIRVALAEG 431

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527
             +A +       E P         + E+ G  GE
Sbjct: 432 WLDARITG-QDAGEDPLPGRAAPAGEPERPGHGGE 465


>gi|293568314|ref|ZP_06679638.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1071]
 gi|291589026|gb|EFF20850.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1071]
          Length = 445

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IAV+TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|285017881|ref|YP_003375592.1| exodeoxyribonuclease VII large subunit [Xanthomonas albilineans GPE
           PC73]
 gi|283473099|emb|CBA15604.1| probable exodeoxyribonuclease vII large subunit protein
           [Xanthomonas albilineans]
          Length = 458

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 140/509 (27%), Positives = 225/509 (44%), Gaps = 58/509 (11%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                   + S+L+   + ++ES      V GE+       +SGH YF+LKD  +++   
Sbjct: 2   PDRTDQILTPSQLNTLARDLLESAFPLAWVEGELGNVT-RPTSGHLYFTLKDARAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     + F+P EG+  L  G++T +     YQ+++E L  +G G L  A E  K KL
Sbjct: 61  MFKPKSQWLPFVPREGLRVLARGRLTLYEARGDYQLVLEHLEEAGEGALRRAFEALKAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+ + K P+P   + +AVITSP+GA +RD+L  +  R P L+V I P  VQG+  
Sbjct: 121 AGEGLFAIERKRPMPAFVRRLAVITSPSGAAVRDVLSVLGRRMPLLQVDILPTLVQGNSA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +IA  + Q         C R D I+L RGGGS+EDLW FNDE +VRAIA S+ P++SA
Sbjct: 181 AAQIAILLRQ------ADACKRYDAILLTRGGGSLEDLWAFNDEHLVRAIAASNTPVVSA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TLAD+AADLRAPTP+ AAE+  P +  + + L    + L +     ++     
Sbjct: 235 VGHETDVTLADFAADLRAPTPSVAAELLAPDQRDITARLSAQHSALQHWQRHRLRQAQQR 294

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            +  L  L   +    L   + R     R L    +    R+     H    +++     
Sbjct: 295 ADQALLRLQAQSPQVQLQLLQRRQRDAARRLTALWKQQQERRQAQLRHAAAILRTSQPQR 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   R  +    +H+   + + L+                                   
Sbjct: 355 RLAMLRTRLQALGRHLPVAMARRLQVQTQ------------------------------- 383

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKT 483
                            +    R +++ +   T+ RGYT + DT+  N +     +    
Sbjct: 384 ----------------RLRALARAMEAISPLATVARGYTILTDTDTGNVVRSVTQVKPGA 427

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKC 512
            +     DG+ +  V + +P       + 
Sbjct: 428 PLRARLLDGELDLRVDSPSPTLSAKLPRS 456


>gi|293571747|ref|ZP_06682766.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E980]
 gi|291608204|gb|EFF37507.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E980]
          Length = 445

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFHPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IA++TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|257885165|ref|ZP_05664818.1| exonuclease VII [Enterococcus faecium 1,231,501]
 gi|261206505|ref|ZP_05921205.1| exonuclease VII [Enterococcus faecium TC 6]
 gi|289565415|ref|ZP_06445864.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           D344SRF]
 gi|294618977|ref|ZP_06698472.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1679]
 gi|257821017|gb|EEV48151.1| exonuclease VII [Enterococcus faecium 1,231,501]
 gi|260079215|gb|EEW66906.1| exonuclease VII [Enterococcus faecium TC 6]
 gi|289162744|gb|EFD10595.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           D344SRF]
 gi|291594638|gb|EFF26020.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1679]
          Length = 445

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IAV+TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|229828871|ref|ZP_04454940.1| hypothetical protein GCWU000342_00956 [Shuttleworthia satelles DSM
           14600]
 gi|229792034|gb|EEP28148.1| hypothetical protein GCWU000342_00956 [Shuttleworthia satelles DSM
           14600]
          Length = 430

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 122/492 (24%), Positives = 212/492 (43%), Gaps = 79/492 (16%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG- 71
           Y+V ++++++  + + +     + V+GE+S     H SGH YFSLKD+   + A +W+  
Sbjct: 6   YTVGQVNHYIAGLFQEDFLLRRIRVKGEVSNL-IYHKSGHIYFSLKDSSGVLGAAMWRSQ 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + + F   EG + +V G +  +     Y++I   +   G G L    E  KK+L E G
Sbjct: 65  RASGLTFAMREGDQVVVSGTVQVYEKGGSYKLIASQIEKEGLGDLYVRFEALKKQLSEMG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F   +K  IP     I ++T+PTGA IRDI+Q    R+P + ++++P  VQG++    I
Sbjct: 125 MFDASYKKQIPRYATKIGIVTAPTGAAIRDIIQVSKRRYPGIEIVLYPALVQGEKAVASI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+ +         D++++ RGGGS+EDLW FN+E + RAI +   P+ISA+GHE
Sbjct: 185 VRGIQTLDAM-------GMDLLVVGRGGGSMEDLWAFNEESVARAIFDCRTPLISAVGHE 237

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+AV                                   
Sbjct: 238 TDTTIADFVADLRAPTPSAAAELAVFDYA------------------------------- 266

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                +  + L   R R       +   ++  +         I +R+++      I+  R
Sbjct: 267 -----SLQKDLRSKRER-------MASAMQYRLNTFRNRLADIEHRLETASPQEMIRNLR 314

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             +   +  ++Q                             RI  +   + +   R+   
Sbjct: 315 GRLDGARHRLDQA------------------------HPSRRISLMREEVLRARQRLCQD 350

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++     +++    L   +    L  G++ +QD     +     L     I I   
Sbjct: 351 MDRRLEQKKQLLAVAVERLDGLSPVRKLASGFSYVQDKAGRRVEDAGKLKVGDFIHIYLH 410

Query: 491 DGQANAIVINKA 502
            GQ +A V   +
Sbjct: 411 RGQLDAEVSGIS 422


>gi|293553171|ref|ZP_06673808.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1039]
 gi|291602581|gb|EFF32796.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1039]
          Length = 445

 Score =  323 bits (827), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD++++I AI
Sbjct: 1   MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDYAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IAV+TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|69244727|ref|ZP_00602991.1| Exonuclease VII, large subunit [Enterococcus faecium DO]
 gi|257879353|ref|ZP_05659006.1| exonuclease VII [Enterococcus faecium 1,230,933]
 gi|257881781|ref|ZP_05661434.1| exonuclease VII [Enterococcus faecium 1,231,502]
 gi|257890179|ref|ZP_05669832.1| exonuclease VII [Enterococcus faecium 1,231,410]
 gi|257893507|ref|ZP_05673160.1| exonuclease VII [Enterococcus faecium 1,231,408]
 gi|258615759|ref|ZP_05713529.1| exodeoxyribonuclease VII large subunit [Enterococcus faecium DO]
 gi|260558795|ref|ZP_05830984.1| exonuclease VII [Enterococcus faecium C68]
 gi|293560488|ref|ZP_06676980.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1162]
 gi|294621589|ref|ZP_06700754.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           U0317]
 gi|314937885|ref|ZP_07845201.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133a04]
 gi|314941376|ref|ZP_07848269.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133C]
 gi|314950135|ref|ZP_07853421.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0082]
 gi|314951324|ref|ZP_07854378.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133A]
 gi|314992845|ref|ZP_07858246.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133B]
 gi|314998049|ref|ZP_07862937.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133a01]
 gi|68196318|gb|EAN10747.1| Exonuclease VII, large subunit [Enterococcus faecium DO]
 gi|257813581|gb|EEV42339.1| exonuclease VII [Enterococcus faecium 1,230,933]
 gi|257817439|gb|EEV44767.1| exonuclease VII [Enterococcus faecium 1,231,502]
 gi|257826539|gb|EEV53165.1| exonuclease VII [Enterococcus faecium 1,231,410]
 gi|257829886|gb|EEV56493.1| exonuclease VII [Enterococcus faecium 1,231,408]
 gi|260075254|gb|EEW63567.1| exonuclease VII [Enterococcus faecium C68]
 gi|291598754|gb|EFF29806.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           U0317]
 gi|291605636|gb|EFF35078.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           E1162]
 gi|313587891|gb|EFR66736.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133a01]
 gi|313592649|gb|EFR71494.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133B]
 gi|313596541|gb|EFR75386.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133A]
 gi|313599799|gb|EFR78642.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133C]
 gi|313642743|gb|EFS07323.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0133a04]
 gi|313643576|gb|EFS08156.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium
           TX0082]
          Length = 445

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF    K  +P  PK IAV+TSP+GAVIRDI+  +  R+P +++++FP  VQG++ 
Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I ++            D +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS+
Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +   +ARL    +R I+ K   
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +       ++       +LD+L + L    + I   K +    + ++++    ++
Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  RQ     ++ +E                                  +  ++K+  
Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R    +               + L   +    + RGY+     N+  +     +     
Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVTEIHQGDL 424

Query: 485 ILINFFDGQANAIVINKAPPK 505
           + I++ DG     V      +
Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445


>gi|206561095|ref|YP_002231860.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia
           J2315]
 gi|198037137|emb|CAR53058.1| putative exodeoxyribonuclease VII large subunit [Burkholderia
           cenocepacia J2315]
          Length = 460

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 138/506 (27%), Positives = 234/506 (46%), Gaps = 60/506 (11%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PFS   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 5   SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 64  QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P
Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPPHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG    +++  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAIA 
Sbjct: 184 APVQGAGSAEKLVAAVAAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P +  L   +   +  L   + R
Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L+ L + L +  + L   R  +++L   L       +      F        
Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVEQLAARLASAASRPVRDARARFA------- 350

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                                + Q+  Q  R    + +  +A L         R     T
Sbjct: 351 ---------------------LAQLRWQRARPDASQARHALAGLSQRLASALQRRHERDT 389

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477
                                  VS     L+  + + TL+RGY ++ D      +    
Sbjct: 390 ---------------------ARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPN 428

Query: 478 NLATKTRILINFFDGQANAIVINKAP 503
            L  + R+ ++  +G A+  + +  P
Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454


>gi|229916252|ref|YP_002884898.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sp. AT1b]
 gi|259646291|sp|C4L3F5|EX7L_EXISA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|229467681|gb|ACQ69453.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sp. AT1b]
          Length = 448

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 132/503 (26%), Positives = 235/503 (46%), Gaps = 63/503 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                VSE+  ++K  ++ +  L  V V GEIS ++  +SSGH YF+LKD+ SR+ A+++
Sbjct: 2   ANPLPVSEVVRYVKRQLDDDVLLRQVAVIGEISNFK-RYSSGHCYFTLKDDASRMKAVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                +++F P++G++ + + K+T +  +   Q+ +E +   G G L    E RK++L E
Sbjct: 61  SRDAKQLQFEPKDGMKVIAVSKVTMYEATGDVQLYVELMRQDGIGLLFERYEARKRELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D+ K P+P  P+ + ++TSP GA + DI   +  R P + +   PV VQG+    
Sbjct: 121 MGWFDDERKKPLPMFPERVGIVTSPKGAALHDIATTLRRRAPHVAITFAPVAVQGEMAAP 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+AI  +N   +       D++I+ RGGGSIE+LW FN++++V AI  S+IPIISA+G
Sbjct: 181 QVASAIRWMNERTD------CDVLIVGRGGGSIEELWAFNEDVVVEAIYASTIPIISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL+D+ AD+RA TPT AAE+A  + +  +  +  L+  L+  +   +    + + 
Sbjct: 235 HETDFTLSDFVADVRAATPTAAAELATAMIDAQRKDVERLDNHLHKAVRSQLDESRSRVE 294

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            ++ +  L +   T+S  R R  +    LE  +   + +       +  ++        +
Sbjct: 295 RMINSYGLKSPRYTISQKRERFAQSEIRLEQGMRRHLTQATHQLRQLSQQLDVKRFSKTL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            K    +    + + +                                            
Sbjct: 355 SKQGDEVNHMVERLRRTRP----------------------------------------- 373

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                   ++      +     L + +    L RGYT I+  +  ++   + L     + 
Sbjct: 374 --------LEQATLQFAQQVGRLHAVSPLAVLSRGYTFIE-QDGAYVQNVKQLRDGD-VS 423

Query: 487 INFFDGQANAIVINKAPPKEQPT 509
           I F DG A A V  +    E+ T
Sbjct: 424 IRFRDGHAIAEVKERIVGDEERT 446


>gi|312795274|ref|YP_004028196.1| Exodeoxyribonuclease VII large subunit [Burkholderia rhizoxinica
           HKI 454]
 gi|312167049|emb|CBW74052.1| Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) [Burkholderia
           rhizoxinica HKI 454]
          Length = 458

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E   +   + GE+S +    +SGH YFS+KD+ ++I  ++++G    
Sbjct: 19  PVSALNRAIGTLLERAFALAWIAGEVSNFT-RAASGHWYFSIKDDCAQIRCVMFRGRAQY 77

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            +F P EG    V   +T +    + Q+ +E++  +G G L  A  K K +L  EGLF+ 
Sbjct: 78  AQFTPREGDRIEVRATVTMYEPRGELQLNVEAVRRTGQGRLYEAFLKLKAQLEAEGLFAA 137

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K  +P  P+ I ++TS   A +RD+L  ++ R P + +I++P  VQG E    +A  I
Sbjct: 138 ERKRVLPSHPRAIGIVTSLQAAALRDVLTTLARRAPHVPIIVYPAPVQGAEAAARVAAMI 197

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
           +  N   E       D++I+ RGGGSIEDLW FNDE + RAIA+S++PI+S +GHETD+T
Sbjct: 198 VTANRRAE------VDVLIVCRGGGSIEDLWAFNDESLARAIASSTLPIVSGVGHETDFT 251

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPT AAE+    +  L   L +  A L     R+++ +   L+ L + L
Sbjct: 252 IADFAADVRAPTPTAAAELVSAQRTMLLRELDHRHAALARGFGRMMERRAQQLDWLARRL 311

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + ++  R                       H   +  R+ S      ++  R  + 
Sbjct: 312 VSPSERIARQRQ----------------------HLRQLSLRLCSAG-ARPVRDARARLT 348

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
             Q    +      R     ++        L ++ ++ +   H                 
Sbjct: 349 MVQLRWRRSQPDTERAAERVQR--------LGQRLRDALHRQHE---------------- 384

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQ 493
                  VS      +  + + TL+RGY ++ D  +   +     L    R+ ++   G 
Sbjct: 385 --RRRAQVSELAARTELLSPRRTLERGYAALIDPHSGAAVRAPDALNPGGRVTVHLAHGS 442

Query: 494 ANAIVINKAP 503
           A+  + +  P
Sbjct: 443 ADLGIAHVQP 452


>gi|170733904|ref|YP_001765851.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia
           MC0-3]
 gi|169817146|gb|ACA91729.1| exodeoxyribonuclease VII, large subunit [Burkholderia cenocepacia
           MC0-3]
          Length = 460

 Score =  322 bits (825), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 134/506 (26%), Positives = 232/506 (45%), Gaps = 60/506 (11%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PFS   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 5   SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 64  QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P
Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG    +++  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAIA 
Sbjct: 184 APVQGAGSAEKLVAAVATANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P +  L   +   +  L   + R
Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++ +   L+ L + L +  + L   R  + +L   L       +      F     R +
Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVQQLAARLASAASRPVRDARARFALAQLRWQ 357

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                 +  + R  +    Q +   +                         + R      
Sbjct: 358 RARP--DPSQARHALAGLSQRLASAL-------------------------QRRHERDTA 390

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477
            +     R                      L+  + + TL+RGY ++ D      +    
Sbjct: 391 RVSACAAR----------------------LEVLSPQRTLERGYAALIDAQTGRAVRAPN 428

Query: 478 NLATKTRILINFFDGQANAIVINKAP 503
            L  + R+ ++  +G A+  + +  P
Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454


>gi|162447339|ref|YP_001620471.1| exodeoxyribonuclease VII large subunit [Acholeplasma laidlawii
           PG-8A]
 gi|254783684|sp|A9NFG5|EX7L_ACHLI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|161985446|gb|ABX81095.1| exodeoxyribonuclease VII large subunit [Acholeplasma laidlawii
           PG-8A]
          Length = 446

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 148/497 (29%), Positives = 223/497 (44%), Gaps = 62/497 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    SVS L+ ++K  +E++  L  V ++GEIS +   H SGH YFSLKD  + I A++
Sbjct: 3   EQKYLSVSALTEYIKVKLENDNHLKRVFLKGEISNFTH-HGSGHLYFSLKDEDAAISAMM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K   + + F P+ G + LV G I+ +     Y I I S+   G G L    E+ +K   
Sbjct: 62  FKTYASTLSFKPKAGDKVLVEGYISLYKARGTYSISIFSMTLDGIGELFLKYEQNRKMFQ 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
           E G F +  K PIP  PKIIAVITS TGAVI+DI   IS R+ L ++ ++P+ VQG+   
Sbjct: 122 ELGYFDESLKKPIPKFPKIIAVITSETGAVIQDIKTTISRRYLLAKIELYPILVQGEGSK 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I   + ++N   +       D+IIL RGGGSIEDLW FN+  +V AI  S IP+I+AI
Sbjct: 182 DDIVKTLARVNRESQA------DVIILGRGGGSIEDLWSFNEAEVVVAIHQSKIPVITAI 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN-- 305
           GHETD TL+DY +DLRAPTPT AAE+A P    L   + +        +   IK      
Sbjct: 236 GHETDTTLSDYVSDLRAPTPTAAAELATPNMADLIKEIKDKVQLSQYYMNERIKNYTALI 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                   L +    L     ++D L  +L +  +  +         +  R+        
Sbjct: 296 LNLDERLELASPKSKLELEHKQIDNLTSKLTYFYKSKLTDNLNQVRLLSQRLT--SPDEK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ ++ I      I  + K+                                       
Sbjct: 354 IERYKERIETLTSRINLLYKKQ-------------------------------------- 375

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                    +         + + LQ       ++RG++     N   IT    + T   +
Sbjct: 376 ---------VDLKTYEYQSSLKQLQGLDPLRIMQRGFSLTT-KNQKVITSIEQINTNDEL 425

Query: 486 LINFFDGQANAIVINKA 502
            I + DG A   V++K 
Sbjct: 426 DIQYKDGTAKVKVLSKE 442


>gi|229823207|ref|ZP_04449276.1| hypothetical protein GCWU000282_00505 [Catonella morbi ATCC 51271]
 gi|229787373|gb|EEP23487.1| hypothetical protein GCWU000282_00505 [Catonella morbi ATCC 51271]
          Length = 467

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 148/507 (29%), Positives = 239/507 (47%), Gaps = 61/507 (12%)

Query: 15  YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV  L+ +LK    V+  L  V V GE+S +R    +GH YFSLK+++ +I+  ++K  
Sbjct: 9   LSVKALTRYLKRKFDVDPYLQKVYVVGEVSNFRLR--TGHQYFSLKEDNVKINVTMFKQA 66

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F  EEG++ L +G+++ +  S  YQ+ +ESL P G G+L  ALE+ K KL + GL
Sbjct: 67  FSKLPFKLEEGMKVLAVGRVSIYEPSGSYQLTLESLQPDGVGSLYLALEQLKAKLKQAGL 126

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
                K P  F P+ IAVITSP+GAVIRDI+  +  R+P+ +V++FP +VQG E   EI 
Sbjct: 127 LDLPKKQPRRF-PRRIAVITSPSGAVIRDIVTTLKRRYPIAQVVVFPTRVQGKEASGEIV 185

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A  +L   +        D +ILARGGG+IEDLW FN+E++ +AI    +P+I+AIGHET
Sbjct: 186 AAFERLKAKQAA-----FDTVILARGGGAIEDLWPFNEEIVAQAILACPLPVITAIGHET 240

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+AD   DLRAPTPT AAEMA      +   L     RL   ++  I++K   L    
Sbjct: 241 DTTIADLVGDLRAPTPTAAAEMAAEELSQVYLKLEESRTRLAQAMLSRIQHKQTQLRRYQ 300

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           +       ++       ++D +   L       +  + +    +  R+K+      +   
Sbjct: 301 EVYIFREPERLYQAYMQQVDLIKERLLRAQSSYLQGQAQGLALLSTRLKAQGPSGRLHLE 360

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            + +   +  +++ + Q  +                                        
Sbjct: 361 GERLARLRHQLQRAMAQTSQ---------------------------------------- 380

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                       ++  +++L++++    L RGY  I+D     +   + L     I +  
Sbjct: 381 -------HYQGELARYSQLLEAYSPLKILARGYAIIEDKQ-EAVKSVQQLQVGQVIDLTL 432

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHN 516
            DGQA A V   +  K +     +   
Sbjct: 433 QDGQATAQVQTISAQKGKNHGNKKEKA 459


>gi|15618970|ref|NP_225256.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae
           CWL029]
 gi|15836593|ref|NP_301117.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae
           J138]
 gi|16753053|ref|NP_445326.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae
           AR39]
 gi|33242435|ref|NP_877376.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae
           TW-183]
 gi|14194741|sp|Q9Z6J7|EX7L_CHLPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|4377397|gb|AAD19199.1| Exodoxyribonuclease VII [Chlamydophila pneumoniae CWL029]
 gi|7189702|gb|AAF38586.1| exodeoxyribonuclease, large subunit [Chlamydophila pneumoniae AR39]
 gi|8979435|dbj|BAA99269.1| exodoxyribonuclease VII [Chlamydophila pneumoniae J138]
 gi|33236946|gb|AAP99033.1| exodeoxyribonuclease VII large chain [Chlamydophila pneumoniae
           TW-183]
 gi|269302862|gb|ACZ32962.1| exodeoxyribonuclease VII, large subunit [Chlamydophila pneumoniae
           LPCoLN]
          Length = 554

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 155/555 (27%), Positives = 262/555 (47%), Gaps = 70/555 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  P  +V+ L+  +K ++ESN   + V+GE+S       SGH YF +KD+ + ++   +
Sbjct: 1   MSSPPQAVASLTERIKTLLESNFCQIIVKGELSNVSLQP-SGHLYFGIKDSQAFLNGAFF 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                  +  P++G   ++ GK+  +    +YQI+  +L+ +G G LL   E+ K++L  
Sbjct: 60  HFKSKYYDRKPKDGDAVIIHGKLAVYAPRGQYQIVAHALVYAGEGDLLQKFEETKRRLTA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EG F+ + K P+PF P+ I VITSPTGAVI+DIL+ +S R    +++++PV VQG+    
Sbjct: 120 EGYFATEKKKPLPFAPQCIGVITSPTGAVIQDILRVLSRRARNYKILVYPVTVQGNSAAH 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI+ AI  +N           D++I+ARGGGSIEDLW FN+E++V+AI  S+IPI+SA+G
Sbjct: 180 EISKAIEVMNA------ENLADVLIIARGGGSIEDLWAFNEEILVKAIHASTIPIVSAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL D+A+D+RAPTP+ AAE+     E            L +   +L+  K   L 
Sbjct: 234 HETDYTLCDFASDVRAPTPSAAAEIVCKSSEEQVQVFEGYLRHLLSHSRQLLTSKKQQLL 293

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---- 364
              + L  ++   + ++ +LD +   ++  ++  I    + +++I   ++ D +      
Sbjct: 294 PWRRFLDRAE-FYTTAQQQLDSIEIAIQKGVQGKIHESKQRYDNISRWLQGDLVSRMTCR 352

Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390
                                              IQ+  Q +   +Q ++ ++ + L Y
Sbjct: 353 LQSLKKMLSQALSHKALSLQVRCHQLKKSLTYPRQIQQASQKLSPWRQQLDTLISRRLHY 412

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429
              E   K   L       + ++      ++ L  R+                       
Sbjct: 413 QKEEYFHKHTRLKHAHNVLEQQLRSHVQKLELLGRRLSRGCELNLQNQKIAYANVKETLA 472

Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487
            IL  + ++     S     L S   KN LKRGY  + D N N+ +    +L    R+ I
Sbjct: 473 TILERRYENSVARYSALKEQLHSLNPKNVLKRGYAMLFDFNENSAMISVDSLQENARVRI 532

Query: 488 NFFDGQANAIVINKA 502
              DG+A   V N  
Sbjct: 533 QLQDGEAILTVTNIE 547


>gi|224476634|ref|YP_002634240.1| exodeoxyribonuclease VII large subunit [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254783709|sp|B9DNP9|EX7L_STACT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|222421241|emb|CAL28055.1| putative exonuclease VII, large subunit [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 446

 Score =  321 bits (823), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 153/492 (31%), Positives = 237/492 (48%), Gaps = 61/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF+LKDN+S ++A+++K  
Sbjct: 5   LSVTALTKYIKYKFDQDPHLQSVLLKGELSNFK-KHSSGHLYFNLKDNNSVVNAMMFKAQ 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            NK++F P+EG E L+  +++ +     YQI +  +   G G L   LE  KK+L ++GL
Sbjct: 64  ANKLDFNPKEGDEVLIEARVSVYERQGNYQIYVNKMHLDGIGNLYQKLEALKKELKKQGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK  IP  PK IAV+T+ TGA IRDI   I+ R+P +  I     VQG +   +I 
Sbjct: 124 FDTKHKKEIPRFPKKIAVLTASTGAAIRDIYSTINSRYPLVEQIQISTLVQGKQAKDDIV 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           N I   +TL         D++I+ RGGGSIEDLW+FN+E +VRAI  +  P+ISA+GHET
Sbjct: 184 NKIKYADTL-------DADVMIVGRGGGSIEDLWNFNEEEVVRAIFEAKTPVISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL+D+ AD+RA TPT AA +A P +  L   +   E  L+  II++I  K   L  + 
Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQVELSQYIKQTELNLSRHIIQIINNKKKHLEHVA 296

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                            + D   R+L  ++   +    +    + NRI    L     + 
Sbjct: 297 SYYKFKQPSLLYDQQIQKKDDFERQLNLSITTKLNNALQKVELLTNRINLKDLKQQTLQG 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            Q  L+    + + +                                   I     R+  
Sbjct: 357 IQSRLQLHDSLNKSIINI--------------------------------IDNSKKRLSQ 384

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            + +               L S +  NT+ RGYT + + N   IT  ++L     I +  
Sbjct: 385 RIEN---------------LNSLSPSNTMLRGYTIV-NKNEQVITSTQSLEKNDEINLQM 428

Query: 490 FDGQANAIVINK 501
            DG  +AIV   
Sbjct: 429 KDGTVDAIVKKV 440


>gi|303326972|ref|ZP_07357414.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp.
           3_1_syn3]
 gi|302862960|gb|EFL85892.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp.
           3_1_syn3]
          Length = 496

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 125/516 (24%), Positives = 223/516 (43%), Gaps = 52/516 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V  L+  L+  +E     V VRGE+S       SGH YFSLKD  +++  + ++G  
Sbjct: 5   ILTVRALTEQLRRSLEGRFPFVWVRGEVSNL-SRPGSGHIYFSLKDQDAQLQCVWFRGQQ 63

Query: 74  NKI----EFLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112
            +      F P                   G++ L  G+I+ +    +YQ+++E + P+G
Sbjct: 64  RQAEQGQAFDPLTGEVFDTPRPSPLELLRNGLDLLCAGRISVYAPRGQYQLLVELVQPTG 123

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FP 171
            G L  A E+RK+KL E G F+ + K P+P+ P+ +A+ITSP+GA I D L+    R   
Sbjct: 124 QGLLAQAFEERKRKLAEAGYFTQERKRPLPWNPQRVALITSPSGAAIHDFLELAQNRGCG 183

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             + +FP  VQG+E   EI  A+ ++N     +      +I+L RGGGS+EDLW FN+E 
Sbjct: 184 AEIRLFPASVQGEEAAPEIIRALDEINAQGWAQ------VIVLIRGGGSLEDLWAFNEEA 237

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +  A+ +S +P+++ +GHE D TLAD  ADLRA TP+ AA++  P++  L+  L    A 
Sbjct: 238 VAEAVFHSRLPVLAGVGHEVDVTLADLTADLRAATPSHAAQLLWPLRAELRQRLDEACAA 297

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
           L       ++                       R R + L        +  +  +    +
Sbjct: 298 LRRAAAGRLERAE-----------------LLLRERENALRWFSPARHQARLSEQVARLS 340

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
                +     +     ++  + E+ +   +      +    +    +    +     + 
Sbjct: 341 -----LALQRAVRQWFADKGRVWERLELARRAALTPEKLDVRQAHLALLHAALGMALPR- 394

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
           R+      +     R+  +    +++    +      L +      L RGY  ++    +
Sbjct: 395 RLSDAEHMLALAGNRLRAVSDAWLENRSRRLESLEAALAANDPSAPLHRGYALVRTARGD 454

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            +      A    I +   DG+  A+V + +P + Q
Sbjct: 455 ILRSVGQTAPGRDIEVRLADGRLAAVVRSVSPEEAQ 490


>gi|311107321|ref|YP_003980174.1| exodeoxyribonuclease VII large subunit [Achromobacter xylosoxidans
           A8]
 gi|310762010|gb|ADP17459.1| exodeoxyribonuclease VII, large subunit [Achromobacter xylosoxidans
           A8]
          Length = 473

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 134/513 (26%), Positives = 228/513 (44%), Gaps = 62/513 (12%)

Query: 2   NPFSQKNSLDHPEY-----SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56
           +P + ++++ +  +     +V++L+  +  ++E ++  + VRGEIS +    +SGH YF+
Sbjct: 17  SPMTIESTVTNNVFARDILTVAQLNQAVGQLLERSIPALWVRGEISNFTA-AASGHWYFT 75

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           LKD+ + + A++++   + + F P  G +  +  +++ +     YQ+  +++  +G G L
Sbjct: 76  LKDSRASVRAVMFRSRASAVGFTPRAGDQVEIRARVSLYEPRGDYQLQADAMRRAGLGNL 135

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
             A  + K++L  EGLF    K     +P+ I VITS   A +RD+L  ++ R P + VI
Sbjct: 136 YEAFLRLKEQLASEGLFDPARKREPVGLPRAIGVITSLHAAALRDVLSALARRAPQVPVI 195

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           I+P  VQG +    +A  +   N   E       D ++L RGGGSIEDLW FNDE + R 
Sbjct: 196 IYPAPVQGADAAGRLAAQVRTANQRAE------VDTLLLVRGGGSIEDLWSFNDEALARE 249

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +A S IP+IS +GHETD+T+AD+ AD+RAPTPT AAE+A   +  L   ++     +   
Sbjct: 250 VAASEIPVISGVGHETDFTIADFVADVRAPTPTAAAELACVPRSELLGRVMQAAEAMTRG 309

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             R ++     L+     L +  Q L   R RL+ L   L         R+    N +  
Sbjct: 310 QQRRLERAAQRLDRAAAQLVSPAQRLEHQRERLNSLRFRLATAWSGPQERRAARVNLLTQ 369

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+      H +    +          Q+ + H R +   +                    
Sbjct: 370 RL-----AHRVPDTGRAADRLAGAARQLGQAHARLLVQRRNR------------------ 406

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                                     ++  T  L++    NTL RGY   +D     +  
Sbjct: 407 --------------------------LAAATAQLRALDPGNTLARGYAIARDEQGRIVRD 440

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
              LA    + ++F  G A   V      +E  
Sbjct: 441 AAALAAGQALDLSFAHGGAEVAVTRTRDSREAS 473


>gi|189218808|ref|YP_001939449.1| Exonuclease VII, large subunit [Methylacidiphilum infernorum V4]
 gi|189185666|gb|ACD82851.1| Exonuclease VII, large subunit [Methylacidiphilum infernorum V4]
          Length = 452

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 131/498 (26%), Positives = 217/498 (43%), Gaps = 77/498 (15%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L+  ++ ++E N+  V V GE+S  R I SSGH YF+LKD  + I+A+ ++   
Sbjct: 26  PWTVSGLTKKIRFLLEGNIGEVWVIGEVSNLR-IPSSGHCYFTLKDETAVINAVFFRTEA 84

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K++F  ++G+  +V   +T +    +YQ+ +      G+G+LL   E+ K+KL +EGLF
Sbjct: 85  EKLDFPLKDGLSIVVRAFLTVYESRGQYQLRVVEARKKGAGSLLEKFEELKRKLAQEGLF 144

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P  P+ I ++TS  GAVI+D  + +  R P + + I  V+VQG+   +EIA 
Sbjct: 145 DLSRKKKLPLFPEKIGIVTSLKGAVIQDFSRILQRRAPGITIYIRDVRVQGNGAAQEIAK 204

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI       E       DI+++ARGGGS+EDLW FN+E++ RA+    IP +SA+GHETD
Sbjct: 205 AIE------EFGELGLVDILVVARGGGSLEDLWAFNEEIVARALFRCPIPTVSAVGHETD 258

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD  AD+RAPTP+ AAE+     E                                 
Sbjct: 259 FTIADLVADVRAPTPSAAAEIVSRDWEEW------------------------------- 287

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                       R  L+ L   +       +         I            +   RQ+
Sbjct: 288 ------------RQELEHLELRMHRFSLQYLEIWKERLEKIKKSSSLAEPSRYVGLLRQN 335

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-IL 431
               +Q +E+ V                            +    T   +L  R++    
Sbjct: 336 ADMLEQALEKAVSLA-------------------------LERARTKYTELELRLKSFNP 370

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
              ++     + +    L S + +  L RGY+   D     + +   ++   +I++    
Sbjct: 371 QLVLERVREELKLWAARLASVSPQVVLDRGYSMTFDRQGRVLKEAEKVSRGEQIVVVLSK 430

Query: 492 GQANAIVINKAPPKEQPT 509
           G   A V      KE+ +
Sbjct: 431 GSLWAAVEKTQQEKERSS 448


>gi|330818108|ref|YP_004361813.1| Exodeoxyribonuclease VII large subunit [Burkholderia gladioli BSR3]
 gi|327370501|gb|AEA61857.1| Exodeoxyribonuclease VII large subunit [Burkholderia gladioli BSR3]
          Length = 460

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 132/503 (26%), Positives = 221/503 (43%), Gaps = 58/503 (11%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +       VS L+  +  ++E       V GE+S +    +SGH YFS+KD  +
Sbjct: 8   PGPGGANAGDGVIPVSALNRAIGSMLERAFPLCWVSGEVSNFT-RAASGHWYFSIKDKDA 66

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  ++++G      F P EG    V   +T +    + Q+ +E++  +G G L  A  +
Sbjct: 67  QMRCVMFRGRAQHAPFTPREGDRIEVRALVTMYEPRGEVQLSVEAVRRTGQGKLFEAFLR 126

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K +L  EGLF+ + K  +P  P+ I ++TS   A +RD+L  ++ R P L VI++P  V
Sbjct: 127 LKAELEAEGLFAAERKRALPAFPRAIGIVTSLQAAALRDVLSTLARRAPHLPVIVYPAPV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG    +++   +   N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +
Sbjct: 187 QGAGAAEKLTAMVQTANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEL 240

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++S +GHETD+T+AD+AADLRAPTPTGAAE+  P +  L   L   +A L   + R ++
Sbjct: 241 PVVSGVGHETDFTIADFAADLRAPTPTGAAELVSPQRALLLRELGERQAELRRGLRRGLE 300

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   L+ L + L +  + L+  R  L +L   L       +      F  +   ++   
Sbjct: 301 ARAQQLDWLARRLVSPAERLARQRTHLQQLAVRLASAGARPVRDARARFALV--MLRWQR 358

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
              ++   R  +    Q +   ++              A L                   
Sbjct: 359 TRPDVAAARLSVTGWSQRLGVALRHRHERAAARVAGCAARL------------------- 399

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLA 480
                                       +  + + TL+RGY   I       +     L 
Sbjct: 400 ----------------------------EVLSPQRTLERGYAALIDTQTGRAVRAPGALK 431

Query: 481 TKTRILINFFDGQANAIVINKAP 503
            + R+ +   +G A+  + +  P
Sbjct: 432 PQRRLTVRLAEGSADVSLADVQP 454


>gi|241663982|ref|YP_002982342.1| exodeoxyribonuclease VII large subunit [Ralstonia pickettii 12D]
 gi|240866009|gb|ACS63670.1| exodeoxyribonuclease VII, large subunit [Ralstonia pickettii 12D]
          Length = 467

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 136/492 (27%), Positives = 213/492 (43%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VSE++  +  ++E N     VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 29  VLTVSEVNRRIAGLLERNFPLGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L   GLF
Sbjct: 88  QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEARGLF 147

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 148 DADRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 207

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + ++N   E       D++IL RGGGSIEDLW FN+E + RA+A SSIPI++ +GHETD
Sbjct: 208 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASSIPIVAGVGHETD 261

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPT AAE+  P +  +   +      L+    R +  +  T++ L +
Sbjct: 262 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSAQFRRQLDRRAQTVDWLAR 321

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R +L  L   L   L   + R                L   +   R  
Sbjct: 322 RLRSPQAQMRERRTQLAHLEGRLRFALTGRVQR---------AEHLQRLLTMRLNAARPD 372

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
              ++  ++Q      R +                                         
Sbjct: 373 ATRERTRLQQAEATLARAMRDTLSR----------------------------------- 397

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    ++     L+  A + TL+RGY  + D   + I     L  +T I      G
Sbjct: 398 -----AQERLARQHTGLELLAPQRTLERGYAVLLDDKGHAIRDPNALHARTHIEARLAQG 452

Query: 493 QANAIVINKAPP 504
            A+  +    P 
Sbjct: 453 TADIEIARVQPK 464


>gi|300690602|ref|YP_003751597.1| exonuclease VII, large subunit [Ralstonia solanacearum PSI07]
 gi|299077662|emb|CBJ50298.1| exonuclease VII, large subunit [Ralstonia solanacearum PSI07]
          Length = 468

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 134/491 (27%), Positives = 211/491 (42%), Gaps = 55/491 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 29  VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   IT +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 88  QYADFTPREGEAVEVRALITLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 147

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193
               K P+P  P  I V+TS   A +RD+L  +  R P   ++            E   A
Sbjct: 148 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGVGAAERIAA 207

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +     L         D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD 
Sbjct: 208 M-----LDTVNARAEVDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETDV 262

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ AD+RAPTPTGAAE+  P +  +   + +    L+  + R +  +  T++ L + 
Sbjct: 263 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVASSWDALSATLRRQLDRRAQTVDWLARR 322

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +    +   R RL  L   L   L   + R       +  R+ +     +I + R  +
Sbjct: 323 LRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLDAARP--DIARERTAL 380

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              +  + + +                                H  + +  TR+      
Sbjct: 381 QAIEAALARAM--------------------------------HATLDRAQTRLSRH--- 405

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                          L+  A + TL+RGY  + D   + I     L  + RI      G 
Sbjct: 406 ------------QAGLELLAPQRTLERGYAVLLDAKGHAIRDPSALHARARIEARLARGA 453

Query: 494 ANAIVINKAPP 504
            +  +    P 
Sbjct: 454 VDIEIAQVQPK 464


>gi|28199769|ref|NP_780083.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa
           Temecula1]
 gi|182682519|ref|YP_001830679.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa M23]
 gi|31563067|sp|Q87AC5|EX7L_XYLFT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226697623|sp|B2I9F0|EX7L_XYLF2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|28057890|gb|AAO29732.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa
           Temecula1]
 gi|182632629|gb|ACB93405.1| exodeoxyribonuclease VII, large subunit [Xylella fastidiosa M23]
 gi|307578797|gb|ADN62766.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 444

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 147/489 (30%), Positives = 226/489 (46%), Gaps = 60/489 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             + S+L+   + ++ES    V + GE+       SSGH Y +LKD  +++   ++K   
Sbjct: 7   ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P EG+  L  G++T +     YQI+++ L  SG G L  A E+ + +L  EGLF
Sbjct: 66  QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEESGEGALRRAFEQLRIRLEAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ IAVITSP+GAVIRDIL  +  RFP + + + P  VQGD    +I  
Sbjct: 126 DPARKQPLPVHPRRIAVITSPSGAVIRDILSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + L    +  R D I++ARGGGS+EDLW FN+E + R IA +  P+ISAIGHETD
Sbjct: 184 ----THLLGGADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+AAD+RAPTP+ AAE+ VP +  L+  L  L+ RL ++    +   I   + L  
Sbjct: 240 FTLADFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 299

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N +  L     R     R L+  L  ++ R      +   R+ +          R
Sbjct: 300 RLQARNPEMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 352

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q+H++ +  Q      L++++                                 
Sbjct: 353 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 380

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489
                      +    R L++     T+ RGY  ++  +NN  +     +     +    
Sbjct: 381 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 430

Query: 490 FDGQANAIV 498
             GQ    V
Sbjct: 431 AHGQLRVRV 439


>gi|29840072|ref|NP_829178.1| exodeoxyribonuclease VII large subunit [Chlamydophila caviae GPIC]
 gi|33301063|sp|Q823U8|EX7L_CHLCV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|29834420|gb|AAP05056.1| exodeoxyribonuclease, large subunit [Chlamydophila caviae GPIC]
          Length = 555

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 170/555 (30%), Positives = 263/555 (47%), Gaps = 69/555 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   P  +V+ L+  +K+++ESN  H+ V+GE+S       SGH YF +KDN S ++   
Sbjct: 2   TTSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDNRSFLNGAF 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +       +  P++G   ++ GK+T +    +YQII  +L+ +G G LL   E+ KK+L 
Sbjct: 61  FHFKSKYFDRRPKDGDSVVIHGKLTVYAPRGQYQIIAHALVYAGEGDLLQKFEETKKRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EG F+ + K  +P IPK I VITSPTGAVI+DIL+ +S R +  +++I+PV VQG    
Sbjct: 121 AEGYFAIEKKQALPTIPKSIGVITSPTGAVIQDILRVLSRRCYQYKLLIYPVTVQGATAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           KEI+ AI ++N           D++ILARGGGSIEDLW FN+E+IV+AIA SSIPIISA+
Sbjct: 181 KEISRAIEEMNK------ENLADVLILARGGGSIEDLWAFNEEIIVKAIAASSIPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+TL D+AAD+RAPTP+ AAE+     E     L +    LN    +L+  K   +
Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSEQQIQVLKSYLRYLNAHAQQLLSGKTKQI 294

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364
               + L + D     +   LD L   +E +++I + +  + +      ++SD L     
Sbjct: 295 QQWKRYLDHVD-FFRPAHQSLDYLCLSIERSIKIKLSQYKQRYMQYARWLQSDVLQRMTY 353

Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390
                                             N Q+  Q +   +Q   + ++Q L Y
Sbjct: 354 RLYDLWKMIVQAFHNRLIAAKHLCIHQKKNLTFLNTQQFIQKLDLWKQQTRRALRQRLGY 413

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429
                  +   L     +   +    +  +  L  R+                       
Sbjct: 414 CSQSLTHQQTSLKHFITKLNQQFTKENHALSLLQKRLTRTFANRVDEHRESYMRSRENLI 473

Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487
             L H +K      S  ++ L     KN  KRGY  + D N N  I   ++L   + + +
Sbjct: 474 FSLHHLVKRNREKYSQVSKQLTLLNPKNVFKRGYAMLFDFNENFAIISAKSLHKHSCVRV 533

Query: 488 NFFDGQANAIVINKA 502
              DG+A   V +  
Sbjct: 534 RLQDGEATLTVTDIQ 548


>gi|15837357|ref|NP_298045.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa 9a5c]
 gi|14194731|sp|Q9PFC3|EX7L_XYLFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|9105645|gb|AAF83565.1|AE003916_19 exodeoxyribonuclease VII large subunit [Xylella fastidiosa 9a5c]
          Length = 444

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 147/489 (30%), Positives = 225/489 (46%), Gaps = 60/489 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             + S+L+   + ++ES    V + GE+       SSGH Y +LKD  +++   ++K   
Sbjct: 7   ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P EG+  L  G++T +     YQI+++ L  +G G L  A E+ + +L  EGLF
Sbjct: 66  QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ IAVITSP+GAVIRDI   +  RFP + + + P  VQGD    +I  
Sbjct: 126 DPARKQPLPVHPRRIAVITSPSGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + L+   +  R D I++ARGGGS+EDLW FN+E + R IA +  P+ISAIGHETD
Sbjct: 184 ----THLLRCADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+AAD+RAPTP+ AAE+ VP +  L+  L  L+ RL ++    +   I   + L  
Sbjct: 240 FTLADFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 299

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N +  L     R     R LE  L  ++ R      +   R+ +          R
Sbjct: 300 RLQARNPEMHLRLLAQRQAEAGRRLEQCLHHVLDRAQGQLRNHHTRLYALNP-------R 352

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   QQH++ +  Q      L++++                                 
Sbjct: 353 QQIAGLQQHLKHLNPQQPLQRRLQQEQL-------------------------------- 380

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489
                      +    R L++     T+ RGY  +   +NN  +     +     +    
Sbjct: 381 ----------RLHGLVRALEAVNPLATVARGYALVHRADNNTLVRDSAQVCVGDVLDTKL 430

Query: 490 FDGQANAIV 498
             GQ    V
Sbjct: 431 AHGQLRVRV 439


>gi|254467863|ref|ZP_05081269.1| exodeoxyribonuclease VII, large subunit [beta proteobacterium KB13]
 gi|207086673|gb|EDZ63956.1| exodeoxyribonuclease VII, large subunit [beta proteobacterium KB13]
          Length = 449

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 143/502 (28%), Positives = 228/502 (45%), Gaps = 62/502 (12%)

Query: 4   FSQKNSLD----HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
            S  N  +       + +SE++  +K+I+ ++L  V + GE+S +    SSGH YFSLKD
Sbjct: 1   MSSNNLTNLVDAEKVFEISEINRIVKNILLNHLEKVWIGGEVSNFVE-ASSGHWYFSLKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + ++I   ++KG  +     P+ G +    G I+ +     YQI IE +   G+G L   
Sbjct: 60  SSAQIRCTMFKGYNHLSSITPKNGDQIEAFGAISLYEARGDYQINIEQVREKGTGNLFEK 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178
             + K KL + GLF++++K P+P  PK I VITS +GA +RD+L  ++ +    +V+I+P
Sbjct: 120 FVQLKDKLEKLGLFNEENKLPVPAYPKNIGVITSASGAALRDVLSVLNKQQNFNQVVIYP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG E   EI  AI + N           D++IL RGGGSIEDLW FN+E +V AIA 
Sbjct: 180 CSVQGKEAANEICAAISKAN------VQKMVDVLILCRGGGSIEDLWSFNEEKVVNAIAQ 233

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           S +PIIS +GHETD+TL D+ AD+RAPTPT AA + +     L        + L   I  
Sbjct: 234 SKLPIISGVGHETDFTLTDFVADMRAPTPTAAASVILEKLNKLDEYFEYYLSALQKNISN 293

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           L+K K   L+ L K + +    L  S+  +  L ++    L+   F   +  + +     
Sbjct: 294 LLKSKNQELDFLEKRIVSPKDKLKRSKELIHNLKKQFTTTLKNKFFNAEKEIDIL----- 348

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                      R+     Q+ I++                           + RI     
Sbjct: 349 -----------RKRFTSPQEKIQRA--------------------------EERIKNTEK 371

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            +     R       +IK   + ++     L     +N L +GY+ + +  +  +     
Sbjct: 372 DLNYTALR-------RIKEQQSKINFIDEKLNILNPRNILAKGYSIVYNGLD-VVKDSNK 423

Query: 479 LATKTRILINFFDGQANAIVIN 500
           +     + I    G     V N
Sbjct: 424 VDLNDNLDIQLHSGTLLVQVKN 445


>gi|313638047|gb|EFS03325.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri FSL
           S4-171]
          Length = 451

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 146/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQGD+  ++
Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL     +L++ K   L  
Sbjct: 239 ETDFALSDFSADIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERRLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L       +  K   FN + +R+        I 
Sbjct: 299 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLLLKQTTFNRLNDRLNYYHPKKEID 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +L ++  +++ +K         ++ K   L  +R+                    
Sbjct: 359 FQQEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 389

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +     LA    I +
Sbjct: 390 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               GQ +A++  K 
Sbjct: 431 KMQGGQIDALITAKE 445


>gi|301300971|ref|ZP_07207136.1| exodeoxyribonuclease VII, large subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300214351|gb|ADJ78767.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Lactobacillus salivarius CECT 5713]
 gi|300851438|gb|EFK79157.1| exodeoxyribonuclease VII, large subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 446

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS L+ +L      +  L  V + GEIS +R   +  H YFSLKD+++ I  +
Sbjct: 1   MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +KI+F PEEG++ LV G++  +  S +YQIII+++ P G G L  A E+  KKL
Sbjct: 59  MFQSAFSKIKFEPEEGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+++ K P+   PK IAVITSP+GAVIRDI+     R+P+ ++++FP  VQGD+ 
Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTRRRYPIAQLVLFPAVVQGDDA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   + Q+N           D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+
Sbjct: 179 ADSLVGRLKQVN------EDGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305
           +GHETD T+AD  AD+RA TPT AAE+A PV       +     R+  ++   I      
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKIYNYQQI 292

Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                    L   D+  +     LD L        + ++++  +    + + ++ +    
Sbjct: 293 LDKVCSSYILQQPDRLYTGYAQNLDSLINRKNQAFKNLVYQNEKQLQLLESNLQHNNPSI 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  + ++    Q + + +   +  +F +K  K+                         
Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+ I   +   +   ++L     
Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVKNVKSLQPNDD 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F +G A A +      KE
Sbjct: 425 VTLYFENGSAEARITKIREEKE 446


>gi|313619079|gb|EFR90885.1| exodeoxyribonuclease VII, large subunit [Listeria innocua FSL
           S4-378]
          Length = 451

 Score =  320 bits (820), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 236/495 (47%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQGD+  + 
Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  +L++ K   L  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERALEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L++     +  K   FN + +R+        I 
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ I  ++Q +++ +K                                          
Sbjct: 359 LQKEQITLRKQALDKAMK------------------------------------------ 376

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                 ++K    +       L+  +    LKRG+          +   + L     I +
Sbjct: 377 -----QQLKDNQQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               G  +A +  K 
Sbjct: 431 KMQGGHIDAHITAKE 445


>gi|309775472|ref|ZP_07670474.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308916768|gb|EFP62506.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 442

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 124/496 (25%), Positives = 222/496 (44%), Gaps = 59/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    YSVS L +++K  +++++    + ++GEIS +   H SGH YF+LKD  ++I  +
Sbjct: 1   MSQSVYSVSSLVHYIKQSLDNDIRIQSILIKGEISNFTN-HRSGHWYFTLKDTRAKISCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     +   + +EG++ +V   ++ +      Q+ +  +   G G L   LE+ K+KL
Sbjct: 60  MFSSHARRCRIVLKEGMKVIVTASVSMYEAGGSVQLYVTGVQADGLGDLFLQLEEVKRKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF    K  +P  P  I VIT+ +GA ++DIL  IS R+PL  V ++P  VQG + 
Sbjct: 120 AAEGLFDPNKKKALPQYPMSIGVITAKSGAAVQDILTTISRRWPLAEVKVYPSLVQGIQA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I   +   +       C   D+++LARGGG+IEDLW FN+E + RA+   S  I++ 
Sbjct: 180 SEAIVKNLALAD-------CGNHDVVLLARGGGAIEDLWCFNEETVARAVYAMSSVIVTG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL DY +D RAPTPT AAE+  P  E ++  +  L  R+   +   ++     
Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPDLEEVRMHVALLRRRMIKDMETRLQLARQA 292

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L  +              RY  D      E  +++ +  +               L   +
Sbjct: 293 LEPVK-----------QHRYMKDPQSYIREEEMKLAMHVRRLGVVEAQ----VAALAMRL 337

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++N Q +    + + QI  +++    L                                R
Sbjct: 338 KQNSQQLAIHSERLYQINARNVEQSRL--------------------------------R 365

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++  L +        +   + +L +++   +L RGY      +   I+   ++     + 
Sbjct: 366 LQNALHNYDMQRKRQMRNVSALLDAYSPLKSLSRGYAIAYHED-AVISSIGDVEVNDTLR 424

Query: 487 INFFDGQANAIVINKA 502
           +   DG  + ++  K 
Sbjct: 425 LRLQDGYIDTVIEKKE 440


>gi|17547246|ref|NP_520648.1| exodeoxyribonuclease VII large subunit [Ralstonia solanacearum
           GMI1000]
 gi|22095664|sp|Q8XWE7|EX7L_RALSO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|17429548|emb|CAD16234.1| probable exodeoxyribonuclease vII large subunit (exonuclease vII
           large subunit) protein [Ralstonia solanacearum GMI1000]
          Length = 440

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 138/494 (27%), Positives = 219/494 (44%), Gaps = 57/494 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG   
Sbjct: 2   LSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRNQ 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
             +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF 
Sbjct: 61  YADFTPREGEAIEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
              K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA  
Sbjct: 121 AARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGAGAAERIAAM 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD 
Sbjct: 181 LDLVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETDV 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +  +  T++ L + 
Sbjct: 235 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVAGCWDALSATLRRQLDRRAQTVDWLARR 294

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +    +   R  L  L   L   L   + R       +  R+ +     +I + R  +
Sbjct: 295 LRSPQAQMRERRAGLAHLEGRLRFALHGRVQRAEHGQRLLAMRLDAARP--DIARERTAL 352

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              +  + + +                                   + +  TR+      
Sbjct: 353 QGIEAALARAM--------------------------------RATLDRAQTRL------ 374

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                    S     L+  A + TL+RGY  + D     I     L  + RI      G 
Sbjct: 375 ---------SHHQAGLELLAPQRTLERGYAVLLDAKGQAIRDPAALHARARIEARLARGA 425

Query: 494 ANAIVINKAPPKEQ 507
            +  +    P   +
Sbjct: 426 VDIEIAQVQPKLPE 439


>gi|116872792|ref|YP_849573.1| exodeoxyribonuclease VII large subunit [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|123466251|sp|A0AIG2|EX7L_LISW6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116741670|emb|CAK20794.1| exodeoxyribonuclease VII, large subunit [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 450

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 143/495 (28%), Positives = 238/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ ++  K  V+  +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 5   KYLTVAAITKYIEKKFDVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKTQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKSAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  +L++ K  TL  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLTVTRQLLERKERTLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L++     +  K   FN + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQIERTDYFSERLKNAFSKQVLLKQTMFNRLNDRLHYYHPRKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              + +  ++Q +E+ +K+ L+                                      
Sbjct: 358 LQNEQLAVRKQALEKAMKRQLKDKQQV--------------------------------- 384

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +    LKRG+          +   ++L     I +
Sbjct: 385 --------------FVRQIEALEHLSPLALLKRGFGVTY-KEGQLVKSVQDLEVGDDIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G   A +  K 
Sbjct: 430 KMQGGHIEASITAKE 444


>gi|239631999|ref|ZP_04675030.1| exodeoxyribonuclease 7 large subunit [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301066684|ref|YP_003788707.1| exonuclease VII large subunit [Lactobacillus casei str. Zhang]
 gi|239526464|gb|EEQ65465.1| exodeoxyribonuclease 7 large subunit [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300439091|gb|ADK18857.1| Exonuclease VII, large subunit [Lactobacillus casei str. Zhang]
          Length = 449

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 133/497 (26%), Positives = 230/497 (46%), Gaps = 62/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A+++
Sbjct: 5   SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL  
Sbjct: 63  RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLSA 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF    + P+P  PK +AV+TSP+GAVI+DI+  ++ R+P+ ++ +FP  VQGD+   
Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +         L + +     D +I+ RGGGSIEDLW FN+E + RA+ +  +P++S++G
Sbjct: 182 SLVK------RLNQIKAIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305
           HETD T+ D+ AD RA TPT AAE+  PV       + S   +                 
Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             ++    L   D+       R+D+  + L+ ++   +           +++    L   
Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLREADHRLAMATSQLDGRQLFIR 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +  ++Q ++  ++                                    
Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                          + +     L   +    L RG+  + D     +    +      I
Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDEQGQMLKSLSDYELDQDI 428

Query: 486 LINFFDGQANAIVINKA 502
            I+  DGQ  A V  K 
Sbjct: 429 HIHVADGQVGAHVTTKE 445


>gi|191638626|ref|YP_001987792.1| exodeoxyribonuclease VII large subunit [Lactobacillus casei BL23]
 gi|226697535|sp|B3WEY3|EX7L_LACCB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|190712928|emb|CAQ66934.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Lactobacillus casei BL23]
 gi|327382668|gb|AEA54144.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus casei LC2W]
 gi|327385862|gb|AEA57336.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus casei BD-II]
          Length = 449

 Score =  320 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 134/497 (26%), Positives = 231/497 (46%), Gaps = 62/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A+++
Sbjct: 5   SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL  
Sbjct: 63  RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLAA 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF    + P+P  PK +AV+TSP+GAVI+DI+  ++ R+P+ ++ +FP  VQGD+   
Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +         L + +T    D +I+ RGGGSIEDLW FN+E + RA+ +  +P++S++G
Sbjct: 182 SLVK------RLNQIKTIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305
           HETD T+ D+ AD RA TPT AAE+  PV       + S   +                 
Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             ++    L   D+       R+D+  + L+ ++   +           +++    L   
Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLREADHRLAMAASQLDGRQLFIR 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +  ++Q ++  ++                                    
Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                          + +     L   +    L RG+  + D     +    +      I
Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDEQGQMLKSLSDYELDQDI 428

Query: 486 LINFFDGQANAIVINKA 502
            I+  DGQ  A V  K 
Sbjct: 429 HIHVADGQVGAHVTTKE 445


>gi|116495120|ref|YP_806854.1| exodeoxyribonuclease VII large subunit [Lactobacillus casei ATCC
           334]
 gi|227534865|ref|ZP_03964914.1| exodeoxyribonuclease VII large subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|122263463|sp|Q038G0|EX7L_LACC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116105270|gb|ABJ70412.1| Exodeoxyribonuclease VII large subunit [Lactobacillus casei ATCC
           334]
 gi|227187621|gb|EEI67688.1| exodeoxyribonuclease VII large subunit [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 449

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 134/497 (26%), Positives = 231/497 (46%), Gaps = 62/497 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A+++
Sbjct: 5   SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL  
Sbjct: 63  RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLAA 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EGLF    + P+P  PK +AV+TSP+GAVI+DI+  ++ R+P+ ++ +FP  VQGD+   
Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +         L + +T    D +I+ RGGGSIEDLW FN+E + RA+ +  +P++S++G
Sbjct: 182 SLVK------RLNQIKTIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305
           HETD T+ D+ AD RA TPT AAE+  PV       + S   +                 
Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             ++    L   D+       R+D+  + L+ ++   +           +++    L   
Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLRDADHRLAMATSQLDGRQLFIR 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   ++ +   +  ++Q ++  ++                                    
Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                          + +     L   +    L RG+  + D     +    +      I
Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDKQGQMLKSLSDYELDQDI 428

Query: 486 LINFFDGQANAIVINKA 502
            I+  DGQ  A V  K 
Sbjct: 429 HIHVADGQVGAHVTTKE 445


>gi|225873352|ref|YP_002754811.1| exodeoxyribonuclease VII, large subunit [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793313|gb|ACO33403.1| exodeoxyribonuclease VII, large subunit [Acidobacterium capsulatum
           ATCC 51196]
          Length = 456

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 128/488 (26%), Positives = 222/488 (45%), Gaps = 57/488 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + + EL    +  +E   + + V GEIS  R    SGH YF+LKD  +++ A+ ++   
Sbjct: 17  IWKIGELVTEARAQIERRFAELRVEGEISNLRAAP-SGHLYFTLKDGEAQLPAVFFRRQA 75

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + + F P++G++ L+ G++T +    + Q++ E++ P G+G+L  A E+ K KL   GLF
Sbjct: 76  SLLRFRPQDGMQVLLRGRLTIYEQRGQMQMVGETMEPLGAGSLQVAFEQLKAKLKARGLF 135

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
             + K PIP  P+ + ++TSPTGAVIRD L  +  R   L+V+++P  VQG+    E+A 
Sbjct: 136 DAERKRPIPAYPRCVGIVTSPTGAVIRDFLNIVQRRHAALQVLLYPATVQGEGAAAEVAA 195

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N  +E       D I++ARGGGS+EDL  FN E +  AIA S +P++SA+GHETD
Sbjct: 196 GISYFNRTRE------VDAIVVARGGGSLEDLAPFNTEPLAEAIAASELPVVSAVGHETD 249

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSL 310
           +T+AD+ ADLRAPTP+ AAE+    +  ++  L  L  RL   +   +    +      +
Sbjct: 250 FTIADFVADLRAPTPSAAAELITAAQHRVEEDLSALSQRLERAMRFRVMQARHGLDRVRV 309

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            +        L   + ++D L    E  +   + +         + +    ++H +   R
Sbjct: 310 EQMTVRMMDALHRRQQKIDELSASGELAMRGRLQQSRERLGLAQHALARQDVVHRLHPMR 369

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +  ++  +E+                                    ++     R+   
Sbjct: 370 ERLDRQRSALERA--------------------------------ARHYLSHRRERLH-- 395

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L++ +    L+RGY  + D     +    +L     +     
Sbjct: 396 -------------GIEGKLRALSPMGVLERGYALVFDCQGRLVKSVDSLKPDEEMTTRLA 442

Query: 491 DGQANAIV 498
           DG   + V
Sbjct: 443 DGNVTSTV 450


>gi|299065874|emb|CBJ37053.1| exonuclease VII, large subunit [Ralstonia solanacearum CMR15]
          Length = 440

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 138/494 (27%), Positives = 219/494 (44%), Gaps = 57/494 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG   
Sbjct: 2   LSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRNQ 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
             +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF 
Sbjct: 61  YADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
              K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA  
Sbjct: 121 AARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGAGAAERIAAM 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD 
Sbjct: 181 LDLVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASGIPIVAGVGHETDV 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +  +  T++ L + 
Sbjct: 235 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVAGGWDALSATLRRQLDRRAQTVDWLARR 294

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +    +   R  L  L   L   L   + R       +  R+ +     +I + R  +
Sbjct: 295 LRSPQAQMRERRAGLAHLEGRLRFALHGRVQRAEHGQRLLAMRLGAARP--DIARERTAL 352

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              +  + + +                                   + +  TR+      
Sbjct: 353 QRLEAALARAM--------------------------------RATLDRAQTRL------ 374

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                    S     L+  A + TL+RGY  + D     I     L  + RI      G 
Sbjct: 375 ---------SHHQAGLELLAPQRTLERGYAVLLDAKGQAIRDPAALHARARIEARLARGA 425

Query: 494 ANAIVINKAPPKEQ 507
            +  +    P   +
Sbjct: 426 VDIEIAQVQPKLPE 439


>gi|309781426|ref|ZP_07676162.1| exodeoxyribonuclease VII, large subunit [Ralstonia sp. 5_7_47FAA]
 gi|308919839|gb|EFP65500.1| exodeoxyribonuclease VII, large subunit [Ralstonia sp. 5_7_47FAA]
          Length = 469

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 135/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VSE++  +  ++E N     VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 31  VLTVSEVNRRIAGLLERNFPLGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 89

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 90  QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEGQGLF 149

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 150 DPGRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 209

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + ++N   E       D++IL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD
Sbjct: 210 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASGIPIVAGVGHETD 263

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPT AAE+  P +  +   +      L+    R +  +  T++ L +
Sbjct: 264 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSTQFRRQLDRRAQTVDWLAR 323

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R +L  L   L   L   + R                L   +   R  
Sbjct: 324 RLRSPQAQMRERRTQLAHLEGRLRFALTGRVQR---------AEHLQRLLTMRLNAARPD 374

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
              ++  ++Q      R                                 +   +     
Sbjct: 375 ATRERTRLQQAEATLARA--------------------------------MRDTLSRAQE 402

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    ++     L+  A + TL+RGY  + D   + I     L  +T I      G
Sbjct: 403 R--------LARQHAGLELLAPQRTLERGYAVLLDDKGHAIRDPNALHARTHIEARLAQG 454

Query: 493 QANAIVINKAPP 504
            A+  +    P 
Sbjct: 455 TADIEIARVQPK 466


>gi|300703206|ref|YP_003744808.1| exonuclease vII, large subunit [Ralstonia solanacearum CFBP2957]
 gi|299070869|emb|CBJ42171.1| exonuclease VII, large subunit [Ralstonia solanacearum CFBP2957]
          Length = 468

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 133/492 (27%), Positives = 216/492 (43%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 29  VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 88  QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 147

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 148 DVARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 207

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD
Sbjct: 208 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETD 261

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +  +  T++ L +
Sbjct: 262 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 321

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R RL  L   L   L   + R       +  R+ +     +    R  
Sbjct: 322 RLRSPQAQMRERRARLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTASERTT 379

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +  + + ++                                         ++   +
Sbjct: 380 LQGIEAALARAMRAT---------------------------------------LDRAQT 400

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +      + +          + TL+RGY  + D +   I     L  + RI      G
Sbjct: 401 R-LSHHQAGLELLA-------PQRTLERGYAVLLDADGRAIRDPNALRARARIEARLALG 452

Query: 493 QANAIVINKAPP 504
             +  +    P 
Sbjct: 453 AVDIEIAQAQPK 464


>gi|71275154|ref|ZP_00651441.1| Exonuclease VII, large subunit [Xylella fastidiosa Dixon]
 gi|71898235|ref|ZP_00680409.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1]
 gi|71163963|gb|EAO13678.1| Exonuclease VII, large subunit [Xylella fastidiosa Dixon]
 gi|71731974|gb|EAO34031.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1]
          Length = 465

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 224/489 (45%), Gaps = 60/489 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             + S+L+   + ++ES    V + GE+       SSGH Y +LKD  +++   ++K   
Sbjct: 28  ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P EG+  L  G++T +     YQI+++ L  +G G L  A E+ + +L  EGLF
Sbjct: 87  QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ IAVITSP GAVIRDI   +  RFP + + + P  VQGD   ++I  
Sbjct: 147 DPARKQPLPVHPRRIAVITSPGGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAEQI-- 204

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + L+   +  R D I++ARGGGS+EDLW FN+E + R IA +  P+ISAIGHETD
Sbjct: 205 ----THLLRCADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TL D+AAD+RAPTP+ AAE+ VP +  L+  L  L+ RL ++    +   I   + L  
Sbjct: 261 FTLTDFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N    L     R     R L+  L  ++ R      +   R+ +          R
Sbjct: 321 RLQARNPKMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q+H++ +  Q      L++++                                 
Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489
                      +    R L++     T+ RGY  ++  +NN  +     +     +    
Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451

Query: 490 FDGQANAIV 498
             GQ    V
Sbjct: 452 AHGQLRVRV 460


>gi|315639634|ref|ZP_07894774.1| exodeoxyribonuclease VII large subunit [Enterococcus italicus DSM
           15952]
 gi|315484595|gb|EFU75051.1| exodeoxyribonuclease VII large subunit [Enterococcus italicus DSM
           15952]
          Length = 446

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 137/503 (27%), Positives = 238/503 (47%), Gaps = 62/503 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     S++ ++ +LK   +++  L  V + GEIS +R   +  H YFSLKD H+++ A+
Sbjct: 1   MSEQYLSITAMTAYLKRKFDADPYLERVYLTGEISNFRLRPN--HQYFSLKDEHAKLSAV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F PEEG++ LVIG+I+ F  S  YQ+ IE + P G G L  A  + K+KL
Sbjct: 59  MFKGAFQKLSFQPEEGMKVLVIGRISLFESSGSYQLYIEHMEPDGVGALYQAYAQLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    +  +P  PK IA++TSP+GAVIRDI+  +  R+P ++++++P  VQG++ 
Sbjct: 119 AKEGLFQLPKQI-LPAYPKRIAILTSPSGAVIRDIITTVRRRYPIVQLVLYPTVVQGEKA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             E+   I ++          + D +I+ RGGGSIEDLW FNDE + R I  +  PIIS+
Sbjct: 178 AGELIKNIQRV------EEDGQFDTMIIGRGGGSIEDLWPFNDEHLARTIVAAKTPIISS 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD+RA TPT AAE+AVPV       +  ++ R+    +  ++ +   
Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSQELLRVEEIKMRVQQAFLYQLERQKQR 291

Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                        ++       +LD   + L   ++ + F K +    ++NR+    L+ 
Sbjct: 292 YAKAVHSYVFRQPNRLYESKAQQLDIASQRLIQQMQSVFFAKKQSATVMMNRLSYQPLMR 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             ++  Q      + +++ +                                +       
Sbjct: 352 VYEREIQEQRYLDERLKKAM--------------------------------NQAYLAHT 379

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   +               + L   +    + RGY  +   ++  +    ++A    
Sbjct: 380 QRVNHAI---------------QSLDLVSPLKIMNRGYGYV-SKDDKIVKSVADIAVDDL 423

Query: 485 ILINFFDGQANAIVINKAPPKEQ 507
           + I+  DG     V+      ++
Sbjct: 424 LTIHLSDGTIQTTVVATHEEGKE 446


>gi|289434642|ref|YP_003464514.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170886|emb|CBH27428.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 450

 Score =  319 bits (817), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 147/495 (29%), Positives = 244/495 (49%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQGD+  ++
Sbjct: 124 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D+++D+RA TPT AAE+AVP    L+  L   + RL     +L++ K  TL  
Sbjct: 238 ETDFALSDFSSDIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERTLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L       +F K   FN + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLFLKQTTFNRLNDRLNYYHPKKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +L ++  +++ +K         ++ K   L  +R+                    
Sbjct: 358 LQKEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 388

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +     LA    I +
Sbjct: 389 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ +A++  K 
Sbjct: 430 KMQGGQIDALITAKE 444


>gi|297621382|ref|YP_003709519.1| exodeoxyribonuclease VII, large subunit [Waddlia chondrophila WSU
           86-1044]
 gi|297376683|gb|ADI38513.1| exodeoxyribonuclease VII, large subunit [Waddlia chondrophila WSU
           86-1044]
          Length = 457

 Score =  319 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 156/500 (31%), Positives = 249/500 (49%), Gaps = 58/500 (11%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + K S D P  +VS+L+  +KH +ES    + ++GE+S ++  HSSGH YFSLKD  ++
Sbjct: 1   MTSKLSQDLPILTVSQLTNAIKHQLESTFPSIWLQGEVSNFK-KHSSGHLYFSLKDGQAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I A++++G +  ++ +P++G + +V G I  F  S KYQI +++L  +G G LL  LE+ 
Sbjct: 60  ISAVMFRGHVQSLKMIPKDGDQVVVYGGINVFAPSGKYQINVQTLRLAGVGELLLKLEEL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQ 182
           KK+L + G FS +HK P+P  PK I ++TSPTGA IRD+L  ++ R     +++ PVKVQ
Sbjct: 120 KKELHQRGWFSQEHKKPLPKFPKKIGIVTSPTGAAIRDMLNVLNRRHGGYHILLNPVKVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+    EIA AI Q N           D+II+ RGGGSIEDLW FN+E++ +AI  SSIP
Sbjct: 180 GEGAASEIARAIEQFN------EHKMVDVIIVGRGGGSIEDLWAFNEEIVAKAIFESSIP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           II A+GHETD  +A+Y AD+RAPTP+ AAE+    K      LI  + +L   + R ++ 
Sbjct: 234 IIGAVGHETDHCIAEYVADVRAPTPSAAAEIVGGEKAQQIEFLIQAQKQLTQNLRRQLRQ 293

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               L  +LK   + +    +      +D      +  ++ +I  +          ++S 
Sbjct: 294 WSTRLQQILKTPLMSSPYALIGPWLQSMDDARLNADRAIKHVIRNQKVVLKSRFQMLQSL 353

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                I   RQ +    +  +                 + I  +L+++ +          
Sbjct: 354 KPTAKILHFRQRLESLTKQCD-----------------LNISGLLKQREER--------- 387

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNL 479
                                +      LQS   KN LK+GY+ +      + IT  + +
Sbjct: 388 ---------------------LKRVASALQSIDPKNLLKKGYSILFSKKTGSVITTIKAV 426

Query: 480 ATKTRILINFFDGQANAIVI 499
                + +   DG+A A + 
Sbjct: 427 NKGDTVKVLLSDGEALAHIS 446


>gi|170731145|ref|YP_001776578.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa M12]
 gi|167965938|gb|ACA12948.1| Exodeoxyribonuclease VII [Xylella fastidiosa M12]
          Length = 465

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 224/489 (45%), Gaps = 60/489 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             + S+L+   + ++ES    V + GE+       SSGH Y +LKD  +++   ++K   
Sbjct: 28  ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P EG+  L  G++T +     YQI+++ L  +G G L  A E+ + +L  EGLF
Sbjct: 87  QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ IAVITSP+GAVIRDI   +  RFP + + + P  VQGD    +I  
Sbjct: 147 DPARKQPLPVHPRRIAVITSPSGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 204

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + L+      R D I++ARGGGS+EDLW FN+E + R IA +  P+ISAIGHETD
Sbjct: 205 ----THLLRCADNSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+AAD+RAPTP+ AAE+ VP +  L+  L  L+ RL ++    +   I   + L  
Sbjct: 261 FTLADFAADIRAPTPSVAAELLVPNQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N    L     R     R L+  L  ++ R      +   R+ +          R
Sbjct: 321 RLQARNPKMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q+H++ +  Q      L++++                                 
Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489
                      +    R L++     T+ RGY  ++  +NN  +     +     +    
Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451

Query: 490 FDGQANAIV 498
             GQ    V
Sbjct: 452 AHGQLRVRV 460


>gi|116619439|ref|YP_821595.1| exodeoxyribonuclease VII large subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222601|gb|ABJ81310.1| Exodeoxyribonuclease VII large subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 455

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 136/495 (27%), Positives = 229/495 (46%), Gaps = 58/495 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V EL+  ++  ++   + + V GEIS  R + +SGH YF+LK+  S + A+ ++   
Sbjct: 16  VYTVGELNGAIRKALDGQFTDIRVAGEISNLR-LAASGHYYFNLKERDSIVKAVAYRSAA 74

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P++G+  +  G +  +    +YQ+ +ESL P G G L  A E+ KKKL  EGLF
Sbjct: 75  RFWKFKPQDGLAVIARGSLDIYEVRGEYQLQVESLEPQGLGALQLAFEQLKKKLAAEGLF 134

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P+ I ++TSP GA I D++Q +S RFP L + +FP  VQG+   +E+  
Sbjct: 135 AAERKRPLPRFPRRIGIVTSPRGAAIADMIQILSRRFPGLHIRLFPALVQGEGSVEEVCR 194

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +           D++I+ RGGGS+EDLW FN E + RAIA  S+P+ISA+GHETD
Sbjct: 195 AIEYFSRTGWA------DVLIVGRGGGSLEDLWTFNTEAVARAIAACSVPVISAVGHETD 248

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSL 310
            T+AD+ ADLRAPTP+ AAEM V  ++ L   +    A+        I    +   L  +
Sbjct: 249 ITIADFVADLRAPTPSAAAEMVVCTRDELLDRIGAARAKAAQGARYRIAMLERRLRLQGI 308

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            +AL    + +     R+D     +   + I +  + R    +  R++   +   +  +R
Sbjct: 309 DRALGTLHRRVGRGLQRIDEQEYRMRERIRIGLDGRERVRRALELRLRRFDVRPRLAADR 368

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +    Q++                                H  + +   R    
Sbjct: 369 RRMELARNSALQVM--------------------------------HARLGQDRNR---- 392

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                      +      L   +    L+RGY  + + +   +     +   ++I +   
Sbjct: 393 -----------LGQLAATLSQLSPLRVLERGYAIVSN-DGGILKDAAAVPANSQIRVRLA 440

Query: 491 DGQANAIVINKAPPK 505
            G   A+V      +
Sbjct: 441 KGGLEAVVTASTEAE 455


>gi|227890597|ref|ZP_04008402.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius
           ATCC 11741]
 gi|227867535|gb|EEJ74956.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius
           ATCC 11741]
          Length = 446

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 144/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS L+ +L      +  L  V + GEIS +R   +  H YFSLKD+++ I  +
Sbjct: 1   MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +KI+F PEEG++ LV G++  +  S +YQIII+++ P G G L  A E+  KKL
Sbjct: 59  MFQSAFSKIKFEPEEGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+++ K P+   PK IAVITSP+GAVIRDI+     R+P+ ++++FP  VQGD+ 
Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTRRRYPIAQLVLFPAVVQGDDA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   + Q+N           D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+
Sbjct: 179 ADSLVGRLKQVN------EDGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305
           +GHETD T+AD  AD+RA TPT AAE+A PV       +     R+  ++   I      
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKISSYQQI 292

Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                    L   D+  +     LD L        + ++++  +    + + ++ +    
Sbjct: 293 LDKVCSSYILQQPDRLYTGYVQNLDSLINRKNQAFKNLVYQNKKQLQLLESNLQHNNPSI 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  + ++    Q + + +   +  +F +K  K+                         
Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+ I   +   +   ++L     
Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVRNVKSLQPNDD 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F +G A A +      K+
Sbjct: 425 VTLYFENGSAEARITKTREEKK 446


>gi|295397725|ref|ZP_06807797.1| exodeoxyribonuclease VII large subunit [Aerococcus viridans ATCC
           11563]
 gi|294974054|gb|EFG49809.1| exodeoxyribonuclease VII large subunit [Aerococcus viridans ATCC
           11563]
          Length = 453

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 136/500 (27%), Positives = 219/500 (43%), Gaps = 62/500 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            D    +VS+L+ ++    E +  L  V V GE+S YR      H YFSLKD+H+ +  +
Sbjct: 2   SDKNYLTVSQLTQYIATKFEKDPYLHQVYVTGEVSNYRKRAK--HQYFSLKDDHAVLSGV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++    N+++F  E+G++ L IG+I  F  + +YQ+ I+ L P G G L    E+ KK+L
Sbjct: 60  MFANAFNQLKFDLEDGMKVLAIGRIGVFNATGRYQLYIDHLEPDGVGALYQRYEQLKKQL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            EEGLF      P+P  PK IAVITSP+GAVIRDI+  +  R+P +++ ++P  VQG   
Sbjct: 120 TEEGLF-QFDPKPVPRFPKNIAVITSPSGAVIRDIITTVKRRYPVVQLTLYPTAVQGKYA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             E+   + +++           D +I+ RGGGSIEDLW FN+E +VRA+    IPIIS+
Sbjct: 179 ADELVKNLERVSA------HGDYDTVIIGRGGGSIEDLWPFNEEKVVRAVRKMDIPIISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D+ +D RA TPT AAE+A PV       +  L+ARL    +  I+Y    
Sbjct: 233 VGHETDTTLVDFVSDQRAATPTAAAEIATPVLSEELIRIQELQARLYRAQVNRIQYLKQR 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L             +     + +L  L   L  + E  +  +     H+  R+       
Sbjct: 293 LLEYQNAYIFRQPLRLYEGHQLKLKNLQARLIQSQESYLKAQKVGVQHLDQRLNQASPAI 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   +  +   Q  +                                I      ++   
Sbjct: 353 TLVNYQTKLQYMQHQL--------------------------------INSQSQQVRSKE 380

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            +++  +                 L   +    + +G+  +       +     +     
Sbjct: 381 YQLQKAM---------------SQLDLLSPLKRMSKGFAYVTSKQ-EPVDSITKVDIGDP 424

Query: 485 ILINFFDGQANAIVINKAPP 504
           + I   DG+  A +      
Sbjct: 425 LAIQLADGRITAQITGTDKK 444


>gi|90961510|ref|YP_535426.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius
           UCC118]
 gi|122449198|sp|Q1WUJ2|EX7L_LACS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|90820704|gb|ABD99343.1| Exodeoxyribonuclease VII large subunit [Lactobacillus salivarius
           UCC118]
          Length = 446

 Score =  319 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 144/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS L+ +L      +  L  V + GEIS +R   +  H YFSLKD+++ I  +
Sbjct: 1   MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +KI+F PE+G++ LV G++  +  S +YQIII+++ P G G L  A E+  KKL
Sbjct: 59  MFQSAFSKIKFEPEKGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+++ K P+   PK IAVITSP+GAVIRDI+     R+P+ ++++FP  VQGD+ 
Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTHRRYPIAQLVLFPAVVQGDDA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   + Q+N           D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+
Sbjct: 179 ADSLVGRLKQVN------EEGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305
           +GHETD T+AD  AD+RA TPT AAE+A PV       +     R+  ++   I      
Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKISNYQQI 292

Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                    L   D+  +     LD L        + ++++  +    + + ++ +    
Sbjct: 293 LDKVCSSYILQQPDRLYTGYAQNLDSLINRKNQAFKNLVYQNEKQLQLLESNLQHNNPSI 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  + ++    Q + + +   +  +F +K  K+                         
Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                                   L   +    + RGY+ I   +   +   ++L     
Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVKNVKSLQPNDD 424

Query: 485 ILINFFDGQANAIVINKAPPKE 506
           + + F +G A A +      KE
Sbjct: 425 VTLYFENGSAEARITKIREEKE 446


>gi|313633361|gb|EFS00204.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri FSL
           N1-067]
          Length = 451

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/495 (29%), Positives = 240/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P   VI++P  VQGD+  ++
Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSAEVIVYPTVVQGDKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWVFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL     +L++ K   L  
Sbjct: 239 ETDFALSDFSADIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERRLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L       +  K   FN + +R+        I 
Sbjct: 299 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLLLKQTTFNRLNDRLNYYHPKKEID 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +L ++  +++ +K         ++ K   L  +R+                    
Sbjct: 359 FQQEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 389

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +     LA    I +
Sbjct: 390 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               GQ +A++  K 
Sbjct: 431 KMQGGQIDALITAKE 445


>gi|323340822|ref|ZP_08081074.1| exodeoxyribonuclease VII large subunit [Lactobacillus ruminis ATCC
           25644]
 gi|323091945|gb|EFZ34565.1| exodeoxyribonuclease VII large subunit [Lactobacillus ruminis ATCC
           25644]
          Length = 448

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 144/503 (28%), Positives = 229/503 (45%), Gaps = 62/503 (12%)

Query: 7   KNSLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           + S +    +V+ L+ ++K     +  +  V + GEIS +R      H YFSLKD ++ I
Sbjct: 3   RMSDEKKYLTVTALTRYIKRKFTADPYMRRVYLTGEISNFRMRPK--HQYFSLKDENAVI 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           D +++    +K++F PEEG++ +V G++  + GS KYQ  +E++ P G G L  AL++ +
Sbjct: 61  DVVMFASDFSKVKFRPEEGMKVIVSGRVDVYEGSGKYQFYVETMEPEGIGALYQALKELQ 120

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183
           +KL  EGLFS   K PI   PK IAVITS +GAVI+DI   I  R+P+ +V++FP  VQG
Sbjct: 121 QKLSAEGLFSAPKK-PINRFPKRIAVITSRSGAVIQDIRTTIRRRYPIAQVVLFPAVVQG 179

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
            +    +   + ++N           D II+ RGGGSIEDLW FN+E + RAI +S IP+
Sbjct: 180 TQAADTLVARLKEVNAR------GDFDTIIIGRGGGSIEDLWPFNEEKVARAIFDSKIPV 233

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           IS++GHETD T+AD  AD+RA TPT AAE+A  V     + +  L  RL   +   I+Y 
Sbjct: 234 ISSVGHETDTTIADLVADVRAATPTAAAELATSVLSDDLAMIDQLRYRLVKSMRNRIEYL 293

Query: 304 INTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                           ++       +LDR+  EL    +  I ++          +    
Sbjct: 294 KQRFEKCKNSYIFMQPERLYEGYLQKLDRMQNELIGLTQNKISQEKNRLTVANKVLYGRI 353

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           +   I   +  + + ++ +E                                        
Sbjct: 354 MPDRISLLQSELKQDRRQLE---------------------------------------- 373

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
                        +K+           L   +    + RG+T +   + + I     L+ 
Sbjct: 374 -------SAGISLLKNSENRFIKAKNALDMLSPLRVMGRGFTYVTQED-HVIKSVNELSV 425

Query: 482 KTRILINFFDGQANAIVINKAPP 504
              I ++  DG ANA +I     
Sbjct: 426 GEEIKLHLQDGYANASIIETEKE 448


>gi|313884670|ref|ZP_07818426.1| exodeoxyribonuclease VII, large subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620038|gb|EFR31471.1| exodeoxyribonuclease VII, large subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 465

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/497 (29%), Positives = 236/497 (47%), Gaps = 60/497 (12%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS L+ +LK     +  L  V + GE+S +R    +GH YF LKD+ + I  +++K  
Sbjct: 13  LTVSALTAYLKQKFVRDPYLQEVYLVGEVSNFRLRP-NGHQYFRLKDDRATISVVMYKSQ 71

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V G ++ +  S  YQ+ +E + P G G L  ALE+ K++  + GL
Sbjct: 72  FAKVPFKLEEGMKVFVKGYVSLYESSGSYQMYLEDIQPDGVGALYQALEQLKEEFRKSGL 131

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  Q + PI   P+ IAVITSP+GAVIRDI+  I  R+P + V++FP +VQG E   EI 
Sbjct: 132 FE-QRQGPIKRFPERIAVITSPSGAVIRDIITTIKRRYPIVDVVVFPSRVQGKEAAGEIV 190

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A   +    +       D IILARGGGSIEDLW FN++++  AI  S +P+IS++GHET
Sbjct: 191 AAFEAIRQQAQD-----FDTIILARGGGSIEDLWPFNEKVVAHAILASPLPVISSVGHET 245

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL- 310
           D T+AD  ADLRAPTPT AAE+AVPV   +   L   + RL   +   I+ + + L  + 
Sbjct: 246 DTTIADLVADLRAPTPTAAAELAVPVLNEVLMRLDEQQLRLGQAMTMAIQGRQDYLKRIT 305

Query: 311 -LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                   D+        LD L + L+  ++ ++ +  + F      I+   L  ++   
Sbjct: 306 DSYIFKQPDRLYQAYSQNLDLLDQSLQVTMQTVLNKADQAFQKTSQAIQIKNLQQSLVYQ 365

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
              + ++ Q +++    +L+      K                                 
Sbjct: 366 ATTLKDRSQALQRATLVYLQSQNQALKNHTD----------------------------- 396

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                             +L++ +    +++GY  +   +   +   +++     I I F
Sbjct: 397 ------------------LLEARSPLQIMQQGYALVTQAD-KLVKSYKDVKIGETIEIQF 437

Query: 490 FDGQANAIVINKAPPKE 506
            DG     VI++    +
Sbjct: 438 TDGSIYGQVIDQEAQSQ 454


>gi|114777127|ref|ZP_01452147.1| exodeoxyribonuclease VII large subunit [Mariprofundus ferrooxydans
           PV-1]
 gi|114552648|gb|EAU55108.1| exodeoxyribonuclease VII large subunit [Mariprofundus ferrooxydans
           PV-1]
          Length = 472

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 126/480 (26%), Positives = 233/480 (48%), Gaps = 10/480 (2%)

Query: 27  IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86
           ++E   + + V GE+S      +SGH YF++KD H+ I A++W+ T  ++  L +EG E+
Sbjct: 1   MLEQGFAAIAVSGEVSRLT-RPASGHLYFTIKDAHAAISAVVWRTTAMRLHALLKEGGEY 59

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPK 146
           +  G ++ +     YQ+++  +  +G+G L    E+RK+   E G F    K   P +P+
Sbjct: 60  IFTGHLSVYEPRGSYQLVVTRIESAGAGKLAAEFERRKQLFAERGWFDPATKKTPPHLPR 119

Query: 147 IIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205
            I + TS T A   D+ + ++ R   L++ + P  VQG   P  I  A+  L T+ +   
Sbjct: 120 HIGIATSATAAAFEDVRKVLATRPAWLQLTLSPCLVQGAGAPSSIVTALKALATMPQ--- 176

Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
              PD+I+L RGGGSIEDLW FNDE +V+A+  S +P+I+ IGHE D TLAD+AAD+RA 
Sbjct: 177 --PPDLILLVRGGGSIEDLWCFNDETVVKAVMESPVPVITGIGHEIDVTLADFAADVRAA 234

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
           TP+ AAE+A P ++ L+  +  + A    +   L  +  ++     +      +      
Sbjct: 235 TPSNAAELACPSRQQLRQQIPRVAAMAAMLHQTLAGHDRHSHALSHRLKQTWHRFTDTRH 294

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
           +RL+++   ++H   +    +  H   +  R+ +    H +   R  +      + Q++ 
Sbjct: 295 HRLEQMHSRMQHLQRVQRHEQRLHLQTLEKRLSAMEPGHQLHNRRHRLTGTVNQLHQMLH 354

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
             L+     +K        L       +      +     R++ +L  +I +    +++ 
Sbjct: 355 GSLQRK---QKLAQTQSRRLHLAAAALLPPRRQKLMPQALRLKQLLLTQIPAHRQRLALY 411

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
              L ++  ++ L RG++   D ++  +T+   L    R+ + F DG A+  + +     
Sbjct: 412 HGRLAAYDKEDILARGFSLNYDMDDKLVTRVAALHPGARLRVEFQDGSADTRIESIKRNP 471


>gi|296133206|ref|YP_003640453.1| exodeoxyribonuclease VII, large subunit [Thermincola sp. JR]
 gi|296031784|gb|ADG82552.1| exodeoxyribonuclease VII, large subunit [Thermincola potens JR]
          Length = 402

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 128/358 (35%), Positives = 207/358 (57%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+EL+ ++K  +E +L  +++ ++GEIS ++  H SGH YF+LKD  + I  ++++   
Sbjct: 5   TVAELNNYIKEKLEGDLFLNNIWLKGEISNFKF-HYSGHMYFTLKDAQATIKCVMFRSRC 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + ++FLPE G+  +  G++  +    +YQ+ IE + P G GTL  A ++ K+KL +EGLF
Sbjct: 64  SNLKFLPENGMGVVARGRVGVYERDGQYQLYIEEMQPDGIGTLYIAFQQLKEKLEKEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             + K  +P +PK +AV+TSPTGA +RDI+  +  R P + +++ PV VQG+  P EIA 
Sbjct: 124 DQKLKKKLPRLPKRVAVVTSPTGAAVRDIITVLHRRCPHIEILLIPVAVQGENAPPEIAR 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI  +N   +       D+II+ RGGGS+E+LW FN E++ R+I  SSIP++SA+GHETD
Sbjct: 184 AIEMVNAYGQA------DVIIVGRGGGSLEELWAFNTEIVARSIFASSIPVVSAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310
           +T+AD+ ADLRAPTP+ AAE+  P    L   L  L+ RL   I   ++   N L     
Sbjct: 238 FTIADFVADLRAPTPSAAAELVAPNYLELVQRLAELQERLVLGINFYLQKNRNRLEVCMK 297

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +      +     +LD     LE  +      K   F      + +   +  +++
Sbjct: 298 SRVMSRPMDLIQSLVQKLDYTVARLEQAMRGFHREKASRFQVACAGLNNLNPLATLER 355



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 3/129 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + E Q+ +  ++  +        + ++ +   +  +  + I  L   +   + R+E  
Sbjct: 268 QRLAELQERL--VLGINFYLQKNRNRLEVCMKSRVMSRPMDLIQSLVQKLDYTVARLEQA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINF 489
           +    +   +   +    L +     TL+RGY   +D    +  T          + I  
Sbjct: 326 MRGFHREKASRFQVACAGLNNLNPLATLERGYAVCRDKVTGSPKTTISQFRVGETVEIIL 385

Query: 490 FDGQANAIV 498
            DG  +  V
Sbjct: 386 RDGLVDCTV 394


>gi|313905345|ref|ZP_07838711.1| exodeoxyribonuclease VII, large subunit [Eubacterium cellulosolvens
           6]
 gi|313469815|gb|EFR65151.1| exodeoxyribonuclease VII, large subunit [Eubacterium cellulosolvens
           6]
          Length = 428

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 123/499 (24%), Positives = 212/499 (42%), Gaps = 80/499 (16%)

Query: 12  HPEYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  YSV +++ H++ I E + +   + V+GEIS     H SGH YF+LKD  S++ ++++
Sbjct: 2   NNVYSVGQVNAHIRGIFEQDFALRRISVKGEISNCT-YHRSGHIYFTLKDETSQLSSVMF 60

Query: 70  KGTLN-KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
            G     + F  + G + +V G +  +    KYQ+  + +   G+G L       K++L 
Sbjct: 61  AGDRRTGLGFAMKNGDKVVVTGSVEVYIRDGKYQLYAKKIELQGAGLLYERFLALKRELE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G+F+ ++K PIP   K + ++T+PTGA +RDI      R P +++I++P  VQG+   
Sbjct: 121 EMGMFAPEYKQPIPQYVKRLGIVTAPTGAAVRDIQNISLRRNPYIQLILYPALVQGEGAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I   I  L+           D II+ RGGGSIEDLW FN+E + RAI +   P+ISA+
Sbjct: 181 PSIVRGIETLDAA-------GVDCIIVGRGGGSIEDLWAFNEEAVARAIFDCRTPVISAV 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD T+AD+ ADLRAPTP+ AAE+AV                                
Sbjct: 234 GHETDTTIADFVADLRAPTPSAAAELAVCD------------------------------ 263

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                        +     R D         +   +      +   + +I+S    + I+
Sbjct: 264 -------------IREILKRYDICQERFSRGMTTALEYSEWKYKTRMEKIRSLRPSNQIR 310

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + R  +   +  +                         RE++   +         L++ I
Sbjct: 311 EKRLRLDAMEDRL-------------------------RERSGRILDENRHRWNTLLSSI 345

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                 K++     + I    ++  +    L +G++ ++      I+    +    R+ I
Sbjct: 346 REGQRRKLEQEKHRLEILIGRVEGASPVRKLSQGFSYVETEAGRNISSVSTVNVGDRLQI 405

Query: 488 NFFDGQANAIVINKAPPKE 506
              DG     +      + 
Sbjct: 406 QVTDGTIRTEITGIEKKER 424


>gi|319892509|ref|YP_004149384.1| Exodeoxyribonuclease VII large subunit [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162205|gb|ADV05748.1| Exodeoxyribonuclease VII large subunit [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464389|gb|ADX76542.1| exodeoxyribonuclease VII, large subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 448

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 143/495 (28%), Positives = 242/495 (48%), Gaps = 61/495 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               ++S L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD +S I A+++
Sbjct: 2   EKYLTISALTKYIKYKFDQDPHLQSVYIKGELSNFK-RHSSGHLYFAVKDENSVIAAMMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K   N+++F P+EG + L+  +++ +     YQI +  +   G G L    E+ K KL++
Sbjct: 61  KTQANQLDFDPKEGDQVLIEARVSVYERRGNYQIYVNHMQLDGVGNLYQKFEQLKNKLMK 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EG F   HK PIP  P+ IA++T+ TGA IRDI   ++ R+PL + I     VQG +   
Sbjct: 121 EGYFDPAHKKPIPKYPQKIAILTASTGAAIRDIQNTLNNRYPLAQQIKISTLVQGAQAKA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   +   + L         D+IIL RGGGSIEDLW+FN+E +V+AI +   P+ISA+G
Sbjct: 181 DIIEKLQSADQL-------GADVIILGRGGGSIEDLWNFNEEDVVKAIFSCQTPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR--LIKYKINT 306
           HETD TL+D+ ADLRA TPT AA +A P K+ L+  L    A LN  + +      +   
Sbjct: 234 HETDTTLSDFVADLRAATPTQAAMLATPDKQELKQVLYQTRAYLNRYMKQHLKHTSQQLQ 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                  L            + D L R L  ++++ +  + +    +  RI+  +   N+
Sbjct: 294 QLQSYYKLKQPGLLYEQQIQKRDELDRALHQSMQLRLQHEQQRLAMLQQRIRIKYFYDNV 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q+ +Q  ++    +                                    H  I++++T 
Sbjct: 354 QRQKQASIDLSSQL------------------------------------HKQIQRILTS 377

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            + I  H++ S           L + +   T+ RGY+ ++  ++  IT   ++    RI 
Sbjct: 378 KKQIFQHQLLS-----------LDNLSPTKTMLRGYSIVK-KDDEVITSSHDIHEGERIE 425

Query: 487 INFFDGQANAIVINK 501
           +   DG  +A +   
Sbjct: 426 VTMKDGALDARIEKV 440


>gi|225024468|ref|ZP_03713660.1| hypothetical protein EIKCOROL_01343 [Eikenella corrodens ATCC
           23834]
 gi|224942743|gb|EEG23952.1| hypothetical protein EIKCOROL_01343 [Eikenella corrodens ATCC
           23834]
          Length = 450

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 133/485 (27%), Positives = 221/485 (45%), Gaps = 57/485 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL++  K+++E  L+ + V GE+S      +SGH YF LKD  +++   ++K    
Sbjct: 10  LSVSELNHLAKNLLEDQLAGLWVGGEVSNLV-KAASGHYYFVLKDQRAQVRCTLFKHAAR 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            +  L  EG E  V+GKIT +    ++QI ++ +   G G L  A E+ K++L  EGLF 
Sbjct: 69  SLAALLREGEEVEVLGKITLYEARGEFQINVQEVRRKGLGQLFEAYERLKQRLQAEGLFD 128

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K P+P  P+ I V+TS   A +RD++  +  R P +RV+++P  VQG          
Sbjct: 129 AARKRPLPAAPQCIGVVTSLAAAALRDVVTTLRRRAPDVRVVVYPTAVQGAGSE------ 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
               + +       + D++I+ RGGGSIEDLW FN+E  VRA+A S +P++S +GHETD+
Sbjct: 183 FQVASAIAAAAEHAQADVLIVCRGGGSIEDLWAFNEEAAVRAVAASPLPVVSGVGHETDF 242

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL D+AAD+RAPTPT AAE+A P +      +  L + + + + R        L+     
Sbjct: 243 TLTDFAADVRAPTPTAAAELASPNRAEQLDKMCRLHSHMRHTLQRRCTDAAQRLDWHAAQ 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  Q     +  L R  + L  ++   + RK     ++                    
Sbjct: 303 LRHPRQKWQEQQTGLLRSRQMLADHMLRHLHRKQEQLAYLA------------------- 343

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                              L ++ +  +    R+            +     ++   ++ 
Sbjct: 344 ------------------ELCRRSRPQVQTATRQ------------LHTQAAQLNRHMAA 373

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +            IL + + ++TL RGY+ I D     +     L +   + ++F  G 
Sbjct: 374 LLAQKQAQCQKQAGILDALSPQHTLSRGYSVITDRTGKVVRDAGRLHSGQVLQLHFETGT 433

Query: 494 ANAIV 498
           A A V
Sbjct: 434 AKAQV 438


>gi|315282226|ref|ZP_07870680.1| exodeoxyribonuclease VII, large subunit [Listeria marthii FSL
           S4-120]
 gi|313614128|gb|EFR87818.1| exodeoxyribonuclease VII, large subunit [Listeria marthii FSL
           S4-120]
          Length = 451

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L    E+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFNKAGRYQFYAEHMEPDGVGALYIQFEQLKAQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  +L++ K  +L  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLRAVTRQLLERKERSLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F  + +R+        I+
Sbjct: 299 LKQHLMLNGPKHQLEQQMERTDYFAERLNNAFSKQIFVKQTAFQRLNDRLHYYHPKKEIE 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ I  +QQ +++ +KQ L+        ++                            
Sbjct: 359 LQKEQIALRQQTLDKAMKQLLKDKQQTFFRQVDA-------------------------- 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVKELEVGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               G  +A++  K 
Sbjct: 431 KMQGGHIDALITAKE 445


>gi|71901135|ref|ZP_00683241.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1]
 gi|71729099|gb|EAO31224.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1]
          Length = 465

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 146/489 (29%), Positives = 227/489 (46%), Gaps = 60/489 (12%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             + S+L+   + ++ES    V + GE+       SSGH Y +LKD  +++   ++K   
Sbjct: 28  ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P EG+  L  G++T +     YQI+++ L  +G G L  A E+ + +L  EGLF
Sbjct: 87  QWLTFQPREGLRVLARGRLTLYEVRGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ IAVITSP+GAVIRDIL  +  RFP + + + P  VQGD    +I  
Sbjct: 147 DPARKQPLPVHPRRIAVITSPSGAVIRDILSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 204

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
                + L+   +  R D I++ARGGGS+EDLW FN+E + R IA +  P+ISAIGHETD
Sbjct: 205 ----THLLRGADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+AAD+RAPTP+ AAE+ VP +  L+  L  L+ RL ++    +   I   + L  
Sbjct: 261 FTLADFAADIRAPTPSVAAELLVPDQRVLRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   N +  L     R     R L+  L  ++ R      +   R+ +          R
Sbjct: 321 RLQARNPEMRLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q+H++ +  Q      L++++                                 
Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489
                      +    R L++     T+ RGY  ++  +NN  +     +     +    
Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451

Query: 490 FDGQANAIV 498
             GQ    V
Sbjct: 452 AHGQLRVRV 460


>gi|224499940|ref|ZP_03668289.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           Finland 1988]
          Length = 450

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 143/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +    Q +++ +KQ L+        ++                            
Sbjct: 358 LQKEQMTLHLQALDKAMKQLLKDKQQYFFRQVDA-------------------------- 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G  +A++  K 
Sbjct: 430 KMQGGHIDALITTKE 444


>gi|187929873|ref|YP_001900360.1| exodeoxyribonuclease VII large subunit [Ralstonia pickettii 12J]
 gi|187726763|gb|ACD27928.1| exodeoxyribonuclease VII, large subunit [Ralstonia pickettii 12J]
          Length = 469

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 133/492 (27%), Positives = 219/492 (44%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVS+++  +  ++E N     VRGEIS +    +SGH YFSLKD  ++I  +++KG  
Sbjct: 31  VLSVSDVNRRIAGLLERNFPLGWVRGEISNFT-RAASGHWYFSLKDAAAQIRCVMFKGRN 89

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 90  QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 149

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 150 DVDRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 209

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + ++N   E       D++IL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD
Sbjct: 210 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASEIPIVAGVGHETD 263

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPT AAE+  P +  +   +      L+    R +  +  T++ L +
Sbjct: 264 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSAQFRRQLDRRAQTVDWLAR 323

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R +L  L   L   L   + R       +  R+ +        + R  
Sbjct: 324 RLRSPQTQMRERRTQLAHLEGRLRFALTGRVQRAEHLQRLLTMRLAAARPDA--TRERTR 381

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + + +  + ++++                                         +     
Sbjct: 382 LDQAEATLARVMRHT---------------------------------------LSRAQE 402

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                    ++     L+  A + TL+RGY  + D   + I     L  + RI      G
Sbjct: 403 R--------LARQHTGLELLAPQRTLERGYAVLLDAKGHAIRDPHALHARARIEARLAQG 454

Query: 493 QANAIVINKAPP 504
            A+  +    P 
Sbjct: 455 TADIEIACVQPK 466


>gi|284801746|ref|YP_003413611.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           08-5578]
 gi|284994888|ref|YP_003416656.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           08-5923]
 gi|284057308|gb|ADB68249.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           08-5578]
 gi|284060355|gb|ADB71294.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           08-5923]
          Length = 450

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 143/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  ++++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +++ +K               +L   ++    ++              
Sbjct: 358 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 430 KMQGGQIEALITAKE 444


>gi|258539854|ref|YP_003174353.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus Lc
           705]
 gi|257151530|emb|CAR90502.1| Exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus Lc
           705]
          Length = 449

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 139/498 (27%), Positives = 239/498 (47%), Gaps = 62/498 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
                +V+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A++
Sbjct: 4   TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL 
Sbjct: 62  FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLF   H+ P+P  P+ +AV+TSP+GAVI+DI+  ++ R+P+ ++I+FP  VQGD+  
Sbjct: 122 AEGLFER-HQRPLPLFPQRVAVVTSPSGAVIQDIITTVARRYPILQLILFPAIVQGDQAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I   + ++      +T    D +I+ RGGGSIEDLW FN+E + RA+A   +PI+S++
Sbjct: 181 DSIVKQLNRI------KTMSGFDAVIIGRGGGSIEDLWPFNEEKVARALAEMPMPIVSSV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKI 304
           GHETD T+AD+ AD RA TPT AAE+  PV       + S   +                
Sbjct: 235 GHETDTTIADFVADRRAATPTAAAEIVTPVTLVDALNRISEDQVRLVNAMHNRLKNAATR 294

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              ++    L   D+       R+D+L + L+ ++   +            ++    L+ 
Sbjct: 295 LQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSINNQLRENEHRLAMATAQLDGRQLLV 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   ++  ++ ++ +++                                          
Sbjct: 355 KVANLQRQQVDDRRRLDR------------------------------------------ 372

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +   + + H +V+     L   +    L RG+  + D     +    +      
Sbjct: 373 -----AMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKTTADYQVDAA 427

Query: 485 ILINFFDGQANAIVINKA 502
           I I+  DGQ  A V  K 
Sbjct: 428 IHIHVADGQIGARVTTKE 445


>gi|91205023|ref|YP_537378.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii RML369-C]
 gi|157827646|ref|YP_001496710.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii OSU
           85-389]
 gi|122426014|sp|Q1RK25|EX7L_RICBR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|166232362|sp|A8GXS3|EX7L_RICB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|91068567|gb|ABE04289.1| Exodeoxyribonuclease VII large subunit [Rickettsia bellii RML369-C]
 gi|157802950|gb|ABV79673.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii OSU
           85-389]
          Length = 442

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 182/491 (37%), Positives = 263/491 (53%), Gaps = 56/491 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +S    E+SVSE+S  +K ++E+N  ++ V+GEISG + I SSGHAYF+LK+N + +  
Sbjct: 6   TSSQTTKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILAC 64

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
             W+  L KI+F   +G+E ++ GK++++ G+S+YQ+ +E+L P+G G ++  L +RK +
Sbjct: 65  TCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVENLQPAGLGAMVQILNERKAR 124

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186
           L +EGLF+   K PIPF+P  I VITS TGAVI+DI+ RI  RFP  VII+PV VQG+  
Sbjct: 125 LEKEGLFNKIRK-PIPFLPNKIGVITSITGAVIQDIIHRIRERFPTHVIIWPVSVQGENS 183

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA AI   N L+E     +PD+II+ARGGGSIEDLW FNDE++VRA  NS IPIISA
Sbjct: 184 GNEIAEAIDGFNKLEEA---NKPDVIIVARGGGSIEDLWSFNDEVLVRATYNSKIPIISA 240

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+TL D AAD RAPTPT AAE AVPV+  L S+L + E  L     +L+K     
Sbjct: 241 VGHEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNSTLQSYEKVLVTNTKQLVKNHEQA 300

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           + +  K        ++  +  LD     L  +L  +I                       
Sbjct: 301 ITNYDKINRYLAHYINHKQQLLDETGFNLLDSLPCLISL--------------------- 339

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
                                       K+ K+      R      I Y    +      
Sbjct: 340 ----------------------------KETKLKSFSKERIHPHKIITYKTLELTHKAAY 371

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           I    ++ +K+    + + + +L S  Y N LKRG+  ++  + NF++ K        + 
Sbjct: 372 IIKSANNTLKNFEYKLELNSLLLLSLDYHNVLKRGFAIVKGESGNFVSSKTTTEK--VLN 429

Query: 487 INFFDGQANAI 497
           I FFDG   A+
Sbjct: 430 IQFFDGNIKAV 440


>gi|199597163|ref|ZP_03210595.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus
           HN001]
 gi|258508677|ref|YP_003171428.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG]
 gi|199591967|gb|EDZ00042.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus
           HN001]
 gi|257148604|emb|CAR87577.1| Exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG]
 gi|259649983|dbj|BAI42145.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG]
          Length = 449

 Score =  317 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 139/500 (27%), Positives = 238/500 (47%), Gaps = 62/500 (12%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
                +V+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A++
Sbjct: 4   TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL 
Sbjct: 62  FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLF   H+ P+P  PK +AV+TSP+GAVI+DI+  ++ R+P+ ++ +FP  VQGD+  
Sbjct: 122 AEGLFER-HQRPLPLFPKRVAVVTSPSGAVIQDIITTVARRYPILQLTLFPAIVQGDQAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I   + ++      +T    D +I+ RGGGSIEDLW FN+E + RA+A   +PI+S++
Sbjct: 181 DSIVKQLNRI------KTMSGFDAVIIGRGGGSIEDLWPFNEEKVARALAEMPMPIVSSV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKI 304
           GHETD T+AD+ AD RA TPT AAE+  PV       + S   +                
Sbjct: 235 GHETDTTIADFVADRRAATPTAAAEIVTPVTLVDALNRISEDQVRLVNAMHNRLKNAATR 294

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              ++    L   D+       R+D+L + L+ ++   +            ++    L+ 
Sbjct: 295 LQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSINNQLRENKHRLAMATAQLDGRQLLV 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   ++  ++ ++ +++                                          
Sbjct: 355 KVANLQRQQVDDRRRLDR------------------------------------------ 372

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 +   + + H +V+     L   +    L RG+  + D     +    +      
Sbjct: 373 -----AMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKTTADYQVDAA 427

Query: 485 ILINFFDGQANAIVINKAPP 504
           I I+  DGQ  A V  K   
Sbjct: 428 IHIHVADGQIGARVTTKEKK 447


>gi|282891363|ref|ZP_06299865.1| hypothetical protein pah_c050o166 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498860|gb|EFB41177.1| hypothetical protein pah_c050o166 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 471

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 152/497 (30%), Positives = 256/497 (51%), Gaps = 34/497 (6%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             + P  +VS+L+  +KH +ES  S V ++GE+S  +   SSGH YFSLKD H+++ A++
Sbjct: 2   PHEAPILTVSQLTTAIKHSLESTFSLVWLQGEVSNCKVQ-SSGHIYFSLKDAHAQVAAVM 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G  + ++ +P++G + ++ G++  +P + KYQI++  L  +G G LL  LE+ K KL 
Sbjct: 61  FRGDASSLKMIPKDGDQVIIQGQLNVYPPTGKYQIVVRELRLAGLGELLLKLEELKIKLH 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
           ++G F  +HK  +P  PK I V+TSPTGAVI+DIL  ++ R     +I+ PVKVQG    
Sbjct: 121 KKGWFKAEHKKALPKFPKRIGVVTSPTGAVIQDILNILTRRATGFHLILNPVKVQGPGAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EIA AI   NT          D++I+ RGGGSIEDLW FN+E++  AI NS IP+ISA+
Sbjct: 181 QEIAKAIQDFNTF------NLVDVMIVGRGGGSIEDLWAFNEEIVAEAIFNSQIPVISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD  +ADY AD+RAPTP+ AAE+ +            +  RL++ + + + +    L
Sbjct: 235 GHETDHCIADYVADVRAPTPSAAAEIVITENAQQLHHFQQILRRLDHSMRQTLHHHRLCL 294

Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            ++LK   L +    L     + D   +EL+ +   ++ +           +++      
Sbjct: 295 KTILKQPLLASPYAILGSWMQKADEFRQELDQSTFRLLKQHRFALESREKILQTLKPTMQ 354

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I   ++ ++  ++ I+  V            +K+  L    +    +I            
Sbjct: 355 IFHLKEKLVNLRKAIDFSVL-----------QKLNELRKAIQLKDEKIL----------- 392

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTR 484
            ++     K++     +      L+S   +N L +GYT +    +   I+    L    +
Sbjct: 393 -MDQRWKVKLEHLRELLKNKEDALKSINPRNLLTKGYTILFSEKDQSVISSVHMLKKDQK 451

Query: 485 ILINFFDGQANAIVINK 501
           I +   DG+A A +   
Sbjct: 452 IRMLLSDGEALAQINEI 468


>gi|313623885|gb|EFR94000.1| exodeoxyribonuclease VII, large subunit [Listeria innocua FSL
           J1-023]
          Length = 451

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQGD+  + 
Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVKNIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  +L++ K  TL  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERTLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L++     +  K   FN + +R+        I 
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ I  ++Q +++ +K                     +Q K++               
Sbjct: 359 LQKEQITLRKQALDKAMK---------------------QQLKDK--------------- 382

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                        +       L+  +    LKRG+          +   + L     I +
Sbjct: 383 -----------QQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               G  +A +  K 
Sbjct: 431 KMQGGHIDAHITAKE 445


>gi|198283756|ref|YP_002220077.1| exodeoxyribonuclease VII large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665433|ref|YP_002426387.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248277|gb|ACH83870.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517646|gb|ACK78232.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 446

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 55/497 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            N    P  +VS L+   + I+E N   + V GE+S +     SGH YFSLKD  +++  
Sbjct: 3   SNDSQIPILTVSALNAAAREIIEGNFPLLRVEGELSNFSS-PGSGHWYFSLKDARAQVRC 61

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            +++         P  G++  V+ + T + G   +Q+I+E L+ +G G L       + K
Sbjct: 62  AMFRQRNTYTRVEPRNGMQVQVLAQPTLYEGRGDFQLIVEQLLDAGVGDLQARFVALRDK 121

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+ + K P+P  P+ +AV+TS +GA + DI   ++ R+P L V+I+PV VQGD+
Sbjct: 122 LAAEGLFAPELKRPLPRWPQRVAVVTSASGAALHDIQVTLARRWPMLAVMIYPVLVQGDQ 181

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +I  A+ ++ + ++       D++ILARGGGS EDLW FN+E + RAI    +P+++
Sbjct: 182 AAAQICTALTRIASRQQE------DVVILARGGGSAEDLWCFNEESVARAIRACPVPVVT 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T+AD+A DLRA TPT AAE   P +      +     +L   + R ++    
Sbjct: 236 GIGHEIDFTIADFAGDLRAATPTAAAEAVSPDRAEWLPRVQTQRRQLEQSMQRTLRDATQ 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L+ L   L +  + +  + +RL      L   ++            +  R         
Sbjct: 296 RLDYLRLRLRHPGERVRDAEHRLRLAREALWQAMQHQQTLWGGRLQMLQARRLRQDPRQR 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q   + +  ++  +   + + L     +++++ A L +                     
Sbjct: 356 LQSLTEMLKTRRAALILAIYKALSSAAAQQQQQAAALRL--------------------- 394

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                                           L+RG+  ++D +   I    ++    R+
Sbjct: 395 --------------------------LDPLAVLQRGFAVLRDESGKVIFGSASIEVHARV 428

Query: 486 LINFFDGQANAIVINKA 502
                 G     V+ K+
Sbjct: 429 TATLAQGTLLCEVLEKS 445


>gi|149198865|ref|ZP_01875907.1| exodeoxyribonuclease VII, large subunit [Lentisphaera araneosa
           HTCC2155]
 gi|149138063|gb|EDM26474.1| exodeoxyribonuclease VII, large subunit [Lentisphaera araneosa
           HTCC2155]
          Length = 443

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 146/496 (29%), Positives = 232/496 (46%), Gaps = 60/496 (12%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S +   +SVS+++  ++ ++E  +    V+GE+S    IHSSGH YFS+KD  S++    
Sbjct: 2   SQNQNMWSVSQVAMAVRQVLEQGVKPFWVKGEVSNLT-IHSSGHVYFSIKDAKSQVSCTY 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           + G      F  ++G+E  V G +T F  S + QII+  L P G G L    E+ KKKL 
Sbjct: 61  FNGAQQARSFSMQDGMEVEVFGSLTYFAPSGRTQIIVRELRPGGVGKLQLEFEQLKKKLS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           + GLFS + K  +P  P+ IAVI+S  GA + D LQ ++ RFP   V +FPV VQG+   
Sbjct: 121 DLGLFSQEKKQSLPVFPEKIAVISSADGAALHDFLQVLNRRFPGKEVRLFPVPVQGEGAH 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           K+IA AI + N ++        D+I++ RGGGSIEDLW FN E +  AIA S IPIISAI
Sbjct: 181 KKIAGAIHRCNLMEAA------DVIVMTRGGGSIEDLWEFNQEHLAYAIAESHIPIISAI 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D+T++D+ ADLRAPTP+ AAE+ V  +      L N    L+  +   +       
Sbjct: 235 GHEVDFTISDFVADLRAPTPSAAAELVVKSRAEFIQELNNQMRSLDKNLQLKLYSLAQKF 294

Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 L   N ++ L      LD +  +LE  L+  +    +    +  R+K+     +
Sbjct: 295 RECKHRLMMNNPEKKLEVQYQNLDFVKLKLEQALQKRLQYMSQRLMELEGRLKNRTP--D 352

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I + ++ +   +  +    +  +R                                    
Sbjct: 353 ILRQKEELQHLKTRLMTSFENFVRNKG--------------------------------- 379

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                   ++++ H ++ +          ++TL RGY+ ++      +    ++     +
Sbjct: 380 -------SQLEAIHKNLKLL-------NPQSTLDRGYSIVRSK-GEILHSNEDVEKSDLL 424

Query: 486 LINFFDGQANAIVINK 501
            I    G   A V  K
Sbjct: 425 EIRLAKGSLVAKVEKK 440


>gi|317132178|ref|YP_004091492.1| exodeoxyribonuclease VII, large subunit [Ethanoligenens harbinense
           YUAN-3]
 gi|315470157|gb|ADU26761.1| exodeoxyribonuclease VII, large subunit [Ethanoligenens harbinense
           YUAN-3]
          Length = 419

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 127/367 (34%), Positives = 214/367 (58%), Gaps = 9/367 (2%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VS+L++++  ++ES+  LS V +RGEIS ++  + SGH Y SLKD  + I A+++KG
Sbjct: 7   VLTVSQLNFYVHTLLESDERLSGVFLRGEISNFKNHYRSGHYYLSLKDEDAVIHAVMFKG 66

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ FLP++G++ +V G+ + +    +YQ  I+ + P G G L  A E+ K+KL +EG
Sbjct: 67  NAQRLRFLPQDGMKVIVSGRASLYERDGQYQFYIDDMQPDGIGALHVAFEQLKEKLRKEG 126

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           LF    K P+P  P+ I V+TS TGA ++DIL  +  R+P+  V++ PV VQG E P +I
Sbjct: 127 LFDASRKRPLPLYPERIGVVTSATGAALQDILHVLGRRWPVAEVVLAPVLVQGVEAPGQI 186

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI  +N  +        D++I+ RGGGSIEDLW FN+E + R IA S IP++SA+GHE
Sbjct: 187 CAAIRAMNAARAA------DVLIVGRGGGSIEDLWAFNEEGVARCIAASDIPVVSAVGHE 240

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ AD RAPTP+ AAE+  P +  + + L  ++AR+ +++ + +  +   + + 
Sbjct: 241 TDFTIADFVADARAPTPSAAAELVSPERAAVTAGLYAMQARMRSLLAQKLADQRARMQAA 300

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + L    + L+  R + D L   L    +    +     + +   + +   +  + +  
Sbjct: 301 AQRLYVPARLLNMHRMKTDMLDARLTTAAKARTEQARAALSALAGELDALNPLKVLSRGY 360

Query: 371 QHILEKQ 377
             +   Q
Sbjct: 361 TVVENAQ 367



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 47/140 (33%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
           +  ++  L     +++ ++             +         L  R+      + +    
Sbjct: 279 QARMRSLLAQKLADQRARMQAAAQRLYVPARLLNMHRMKTDMLDARLTTAAKARTEQARA 338

Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           ++S     L +      L RGYT +++     +T+   LA    + + F DG+A  +V +
Sbjct: 339 ALSALAGELDALNPLKVLSRGYTVVENAQGCAVTRAAALAPGESVTLRFLDGRAYCVVQS 398

Query: 501 KAPPKEQPTKKCQLHNNKRE 520
                    +  +    + +
Sbjct: 399 VGTIDRDGEQDEKRDGERTD 418


>gi|254827622|ref|ZP_05232309.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           N3-165]
 gi|258600000|gb|EEW13325.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           N3-165]
          Length = 450

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 141/495 (28%), Positives = 240/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +++        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDQLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +    Q +++ +K               +L   ++    ++              
Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G  +A++  K 
Sbjct: 430 KMQGGHIDALITAKE 444


>gi|291562671|emb|CBL41487.1| exodeoxyribonuclease VII, large subunit [butyrate-producing
           bacterium SS3/4]
          Length = 422

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 129/489 (26%), Positives = 214/489 (43%), Gaps = 79/489 (16%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV++++ ++K++   +     + V+GE+S  +  HSSGH YF+LKD    + A+++  
Sbjct: 4   VYSVAQVNSYIKNMFAQDFLLRRLSVKGEVSNCK-YHSSGHIYFTLKDGGGTLQAVMFAS 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F   EG + +V G +  +    KYQ+    +  SG G L    EK  K+L E G
Sbjct: 63  QRRGLNFKLAEGQQVVVKGTVDVYERDGKYQLYASEIELSGRGDLYLRFEKLLKELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F  Q+K PIP   K + ++T+PTGA IRDI+     R P +++I++P  VQGD     I
Sbjct: 123 MFDPQYKRPIPRFAKTVGIVTAPTGAAIRDIMNISHRRNPYVQLILYPALVQGDGAKDSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+ +         D++I+ RGGGSIEDLW FN+E + RAI   + P+ISA+GHE
Sbjct: 183 VKGIRTLDAM-------GLDVLIVGRGGGSIEDLWAFNEEEVARAIFACNTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADYAADLRAPTP+ AAE+AV      +  L   +                     
Sbjct: 236 TDVTIADYAADLRAPTPSAAAELAVFDYFQFRMDLNARK--------------------- 274

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                                        + ++           +R+K D L       +
Sbjct: 275 -----------------------------QRLMKEMGTCLERAKSRLKHDELTLRFYDPK 305

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + EK++ +                    +   L      R       ++   T +   
Sbjct: 306 SQLNEKKKRL------------------ADVEDTLLRLIAERQQETRRDLQNAETLLRRS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++ ++ +   ++++ +  L   +    +  G+  I D +   +          RI +   
Sbjct: 348 MADRLAADKRNLAVKSERLWGLSPLKKISGGFGFITDGDGKRLETVEQAEAGKRITVRVK 407

Query: 491 DGQANAIVI 499
           DG+  A+V 
Sbjct: 408 DGRIGAVVD 416


>gi|194288711|ref|YP_002004618.1| exodeoxyribonuclease vii large subunit [Cupriavidus taiwanensis LMG
           19424]
 gi|193222546|emb|CAQ68549.1| exonuclease VII, large subunit [Cupriavidus taiwanensis LMG 19424]
          Length = 461

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 134/507 (26%), Positives = 231/507 (45%), Gaps = 57/507 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +P             V EL++ +  ++E +     VRGEIS +    +SGH YFSLKD  
Sbjct: 10  DPSFTAPRSGREVIPVGELNHAIARVLERSFPLAWVRGEISNFT-RAASGHWYFSLKDAR 68

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I  ++++G    ++F P EG    V   ++ +    + Q+ +E++  +G G L  A  
Sbjct: 69  AQIRCVMFRGRNQHVDFQPREGEAVEVRAVVSMYEARGELQLGVEAMRRAGLGNLYEAFL 128

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180
           + K+KL + GLF+ + K P+P  P+ I V+TS   A +RD+L  +  R   + V+++PV 
Sbjct: 129 RLKEKLSQAGLFAPERKRPVPAQPRAIGVVTSLQAAALRDVLSTLRRRAPHVPVVVYPVP 188

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG    ++IA+ +       E       D++IL RGGGSIEDLW FN+E++ +AIA  +
Sbjct: 189 VQGAGAAQKIADMLDAAAARSE------CDVLILCRGGGSIEDLWSFNEEVVAQAIARCT 242

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++S +GHETD+T+AD+ AD+RAPTPTGAAE+  P + HL +  +     L   + R +
Sbjct: 243 LPVVSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRSHLLAQTLRARDALRQCLRRGL 302

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+ L + + +    L   R ++D L R L   L                     
Sbjct: 303 DLRAQHLDWLARRVRSPQAQLQERRAQVDNLARHLRSALR-------------------- 342

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                        +  Q+H +Q++    R    +     A +  L ++ +      H   
Sbjct: 343 -----------DTVVSQRHRQQLLAMRWRACRPDALAAHAGVARLWQRLQAAALRQHER- 390

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                R+                     L+  A + TL+RGY  + D     +     + 
Sbjct: 391 --AAQRLARS---------------AGALELLAPQRTLERGYAVLLDQRGRALRAPAEIR 433

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507
             + +  +  +G A+  +        +
Sbjct: 434 AGSVVEAHLAEGVADLAIAGVQAKLPE 460


>gi|307609618|emb|CBW99120.1| exonuclease VII, large subunit [Legionella pneumophila 130b]
          Length = 443

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 152/496 (30%), Positives = 230/496 (46%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S   P  +VS+L+  +K  +E+ +  V V GEIS      SSGH YF+LKD+ ++I    
Sbjct: 2   SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60

Query: 69  WKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +K   +  +     +G + +  GK++ +    +YQ+I+E ++ +G G L    E+ K KL
Sbjct: 61  FKNRHSNSLLRNFNDGQQIVATGKLSLYEARGEYQLIVEEIVEAGMGILYQRFEELKIKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+ + K  +P IP+ I +ITSPTGA I+DIL  +  RFP+ R+II+P +VQG   
Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLDRRFPIARIIIYPSEVQGQTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P+++       N+LK      R  ++ILARGGGSIEDLW FNDE + R IA S IP++S 
Sbjct: 181 PQQLV------NSLKLANAHKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+ AD RA TPT AA    P    L + L     RL++ IIRLIK     
Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN L+  + +  Q +S     LD L R+L   +   I       N    ++++      I
Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQASNPKIQI 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ +  + +    + Q                                 +   + +L  +
Sbjct: 355 ERTKIQLQQLIMQLTQ--------------------------------EIRIKVNQLKNQ 382

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   LS                L +        RGY  +   N   +   +       I 
Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTIN 426

Query: 487 INFFDGQANAIVINKA 502
           I    G     V    
Sbjct: 427 IRLAKGSLACEVTQIK 442


>gi|148360529|ref|YP_001251736.1| exonuclease VII large subunit [Legionella pneumophila str. Corby]
 gi|166232357|sp|A5IG90|EX7L_LEGPC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|148282302|gb|ABQ56390.1| exonuclease VII, large subunit [Legionella pneumophila str. Corby]
          Length = 443

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 153/496 (30%), Positives = 231/496 (46%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S   P  +VS+L+  +K  +E+ +  V V GEIS      SSGH YF+LKD+ ++I    
Sbjct: 2   SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60

Query: 69  WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +K    + +     +G + +  GK++ +    +YQ+I+E ++ +G G L    E+ K KL
Sbjct: 61  FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGVLYQRFEELKIKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+ + K  +P IP+ I +ITSPTGA I+DIL  ++ RFP+ RVII+P +VQG   
Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARVIIYPSEVQGQTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P+++ NA+   N         R  ++ILARGGGSIEDLW FNDE + R IA S IP++S 
Sbjct: 181 PQQLVNALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+ AD RA TPT AA    P    L + L     RL++ IIRLIK     
Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN L+  + +  Q +S     LD L R+L   +   I       N    ++++      I
Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQASNPKIQI 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ +  + +    + Q                                 +   + +L  +
Sbjct: 355 ERTKIQLQQLIMQLTQ--------------------------------EIRIKVNQLKNQ 382

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   LS                L +        RGY  +   N   +   +       I 
Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTIN 426

Query: 487 INFFDGQANAIVINKA 502
           I    G     V    
Sbjct: 427 IRLAKGSLACEVTQIK 442


>gi|290893530|ref|ZP_06556513.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J2-071]
 gi|290556875|gb|EFD90406.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J2-071]
 gi|307570943|emb|CAR84122.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           L99]
          Length = 450

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  ++++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +++ +K               +L   ++    ++              
Sbjct: 358 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 430 KMQGGQIEALITAKE 444


>gi|16800466|ref|NP_470734.1| exodeoxyribonuclease VII large subunit [Listeria innocua Clip11262]
 gi|22095671|sp|Q92BZ3|EX7L_LISIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|16413871|emb|CAC96629.1| lin1398 [Listeria innocua Clip11262]
          Length = 450

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 143/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQGD+  + 
Sbjct: 124 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  +L++ K   L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERALEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L++     +  K   FN + +R+        I 
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ I+ ++Q +++ +K                     +Q K++               
Sbjct: 358 LQKEQIILRKQALDKAMK---------------------QQLKDK--------------- 381

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                        +       L+  +    LKRG+          +   + L     I +
Sbjct: 382 -----------QQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G  +A +  K 
Sbjct: 430 KMQGGHIDAHITAKE 444


>gi|16803401|ref|NP_464886.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           EGD-e]
 gi|224501696|ref|ZP_03670003.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           R2-561]
 gi|254829882|ref|ZP_05234537.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           10403S]
 gi|22095665|sp|Q8Y7C4|EX7L_LISMO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|16410777|emb|CAC99439.1| lmo1361 [Listeria monocytogenes EGD-e]
          Length = 450

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 240/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +    Q +++ +K               +L   ++    ++              
Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G  +A++  K 
Sbjct: 430 KMQGGHIDALITAKE 444


>gi|217964493|ref|YP_002350171.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           HCC23]
 gi|217333763|gb|ACK39557.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           HCC23]
          Length = 451

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 142/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  ++++ K  +L  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +++ +K               +L   ++    ++              
Sbjct: 359 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 431 KMQGGQIEALITAKE 445


>gi|330833280|ref|YP_004402105.1| exodeoxyribonuclease VII large subunit [Streptococcus suis ST3]
 gi|329307503|gb|AEB81919.1| exodeoxyribonuclease VII large subunit [Streptococcus suis ST3]
          Length = 447

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 146/497 (29%), Positives = 233/497 (46%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   S  H YFSLKD+ + I A +W G 
Sbjct: 5   LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  EEG++  VIG+I  +  +  Y I+IE   P G G L    E+ K+ L +EGL
Sbjct: 63  YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  +P   K I VITSP+GAVI+DI+  +S RFP + ++++P KVQGD   +E+ 
Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV K  L   L   E R    +   +++    L  +
Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL  +L+  ++ +  ++ +    +  R++       ++ 
Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQRRLQGVHPGRKVES 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ I+++++ ++  +         +                                  
Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L        + RGY  I+  +   I    N+     + I 
Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ +  V +    +
Sbjct: 429 MKDGQLDVEVKHVQTDE 445


>gi|257091770|ref|YP_003165411.1| exodeoxyribonuclease VII large subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044294|gb|ACV33482.1| exodeoxyribonuclease VII, large subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 469

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 132/525 (25%), Positives = 220/525 (41%), Gaps = 60/525 (11%)

Query: 1   MNPFSQKNS---LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57
           M+      +      P  +VS L+   +  +E+      V GE+S      +SGH YFSL
Sbjct: 1   MSDIPSPATGLPAFVPVIAVSLLNRLARERLEAAFPLCWVAGEVSNL-SHAASGHVYFSL 59

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
           KD  +++  ++++     + +  E G        +T +     +Q+ +E+   +G G L 
Sbjct: 60  KDAAAQVRCVMFRSRTQLLGWRLENGQHIEARVLVTLYEARGDFQLNVEAARRAGVGNLY 119

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
               + K+KL  EGLF+   K P+P  P+ I ++TS   A +RD+L  ++ R P + +++
Sbjct: 120 EKFLRLKEKLESEGLFASAGKRPLPGFPRRIGIVTSLQAAALRDVLSTLARRAPQVGIVV 179

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           +P  VQG+    +IA +I               + +I+ RGGGS+EDLW FNDE++ RAI
Sbjct: 180 YPTLVQGEGAASQIAESIRI------AGERRECETLIVCRGGGSMEDLWAFNDELVARAI 233

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
               IP++S IGHETD+T+AD+AAD RAPTPT AAE+A P +  L + L   +  L   +
Sbjct: 234 RACPIPVVSGIGHETDFTIADFAADQRAPTPTAAAELAAPEQLVLLARLAARQLALRRSV 293

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            + I  +   L+ L + L +  Q L+  R  L                           R
Sbjct: 294 DQQINQRGQQLDWLTRRLQHPAQYLAHQREVL-----------------------RNQQR 330

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
             +  L+    + R  + +  + +     +  R      +   A L    +Q   R    
Sbjct: 331 QLAAALLQASARARTALADLSRRLLLARPETSRRTGQV-EALAARLRGAWQQAAQR---- 385

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
                                    ++  T  L        L RGY    D     +   
Sbjct: 386 ---------------------QGADLARLTASLAHLNPAAVLARGYCVALDERGRIVRDS 424

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
           R++    RI + F  G+A+A V+   P          + +    +
Sbjct: 425 RSVEPSQRIAVFFERGRADAAVLAVFPDGGLAPAVAAIASKAGPE 469


>gi|229025643|ref|ZP_04182049.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272]
 gi|228735641|gb|EEL86230.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272]
          Length = 362

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 149/366 (40%), Positives = 209/366 (57%), Gaps = 12/366 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +V+ L+ ++K  +E   +L  V ++GEIS ++  HS GH YF+LKD ++RI A+
Sbjct: 1   MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    I+F PE G++ LV GKI+ +  S  YQI I+ + P G G L  A E+ K +L
Sbjct: 60  MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEGLFS  +K  IP   K I VITSPTGA IRDI+  I  R+P+  VI+FPV VQG+  
Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI   N ++E       D++I+ RGGGSIE+LW FN+E++ RAI  S IPIISA
Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEVVARAIFTSEIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTPT AAE+AVP    LQ  ++    RL   +   +  K   
Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNVLELQEKVLQRTLRLQRAMRERVHKKEEK 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L K+       Q       +LDR   +L    E  I +K      +   ++      
Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353

Query: 365 NIQKNR 370
               N+
Sbjct: 354 KNHANK 359


>gi|146319310|ref|YP_001199022.1| exodeoxyribonuclease VII large subunit [Streptococcus suis 05ZYH33]
 gi|146321513|ref|YP_001201224.1| exodeoxyribonuclease VII large subunit [Streptococcus suis 98HAH33]
 gi|145690116|gb|ABP90622.1| Exonuclease VII, large subunit [Streptococcus suis 05ZYH33]
 gi|145692319|gb|ABP92824.1| Exonuclease VII, large subunit [Streptococcus suis 98HAH33]
 gi|292558942|gb|ADE31943.1| Exonuclease VII, large subunit [Streptococcus suis GZ1]
          Length = 449

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   S  H YFSLKD+ + I   +W G 
Sbjct: 7   LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQVTMWAGV 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  EEG++  VIG+I  +  +  Y I+IE   P G G L    E+ K+ L +EGL
Sbjct: 65  YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  +P   K I VITSP+GAVI+DI+  +S RFP + ++++P KVQGD   +E+ 
Sbjct: 125 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 185 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV K  L   L   E R    +   +++    L  +
Sbjct: 239 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 298

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL  +L+  ++ +  ++ +    +  R++       ++ 
Sbjct: 299 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQQRLQGVHPGRKVES 358

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ I+++++ ++  +         +                                  
Sbjct: 359 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L        + RGY  I+  +   I    N+     + I 
Sbjct: 386 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 430

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ +  V +    +
Sbjct: 431 MKDGQLDVEVKHVQTDE 447


>gi|253752343|ref|YP_003025484.1| exodeoxyribonuclease VII large subunit [Streptococcus suis SC84]
 gi|253754169|ref|YP_003027310.1| exodeoxyribonuclease VII large subunit [Streptococcus suis P1/7]
 gi|253756103|ref|YP_003029243.1| exodeoxyribonuclease VII large subunit [Streptococcus suis BM407]
 gi|251816632|emb|CAZ52272.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis
           SC84]
 gi|251818567|emb|CAZ56400.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis
           BM407]
 gi|251820415|emb|CAR47053.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis
           P1/7]
 gi|319758744|gb|ADV70686.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis
           JS14]
          Length = 447

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   S  H YFSLKD+ + I   +W G 
Sbjct: 5   LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQVTMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  EEG++  VIG+I  +  +  Y I+IE   P G G L    E+ K+ L +EGL
Sbjct: 63  YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  +P   K I VITSP+GAVI+DI+  +S RFP + ++++P KVQGD   +E+ 
Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV K  L   L   E R    +   +++    L  +
Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL  +L+  ++ +  ++ +    +  R++       ++ 
Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQQRLQGVHPGRKVES 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ I+++++ ++  +         +                                  
Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L        + RGY  I+  +   I    N+     + I 
Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ +  V +    +
Sbjct: 429 MKDGQLDVEVKHVQTDE 445


>gi|283769472|ref|ZP_06342368.1| exodeoxyribonuclease VII, large subunit [Bulleidia extructa W1219]
 gi|283103740|gb|EFC05126.1| exodeoxyribonuclease VII, large subunit [Bulleidia extructa W1219]
          Length = 461

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 138/496 (27%), Positives = 220/496 (44%), Gaps = 47/496 (9%)

Query: 16  SVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS +S  +K ++E +L   +  + GEIS +R   SS H YFSLKD  + I+  IW  T+
Sbjct: 6   SVSVVSKRIKSLLERDLPLHNFLMEGEISNFR---SSKHWYFSLKDEQASINCAIWNSTI 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + I F P+ G + +V   +  +  ++   + I ++   G G L+  LE+ KKKL  EGLF
Sbjct: 63  SHIPFKPQNGDQVIVKCSLGVYVPNTSITLTITAMRKQGIGDLMQQLEELKKKLKTEGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             +HK P+P  PK I +IT    A   D+++ I+ R+P+ +   +   VQG      I  
Sbjct: 123 DAKHKKPLPTYPKEIGIITGKDTAGKADMIRTINLRWPMAKQFFYECPVQGSGSIPLILK 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI + +           D++ILARGGGS+EDL+ FN E IVR +     PI++ IGHETD
Sbjct: 183 AIQEADHGHH-------DVLILARGGGSLEDLFIFNSEKIVRCVYACQTPIVTGIGHETD 235

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL DY +DLRA TPTGAAE   P                       I+ + +  +    
Sbjct: 236 TTLVDYVSDLRANTPTGAAEAVTP---------------------NQIEVRQSLRHMFSH 274

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            +      LS  +  L RL +        ++ R          ++    L   + K ++ 
Sbjct: 275 LIQQMLTRLSLVQQNLSRLEKSAYFQNPELLTRDK------SYQLDQYVL--RLSKQKET 326

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF----YLHTHIKKLITRIE 428
           +LE ++   Q + +    +    +     L   ++Q K ++         H+ +    + 
Sbjct: 327 LLELRKQCNQWIHRFESSVIQRSRFYQNQLQDYQKQMKQKLQETSSNQKYHLSQQKNTLS 386

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             L    +          ++L +++    L RGY+ I       I    +LA    I I 
Sbjct: 387 KALQQYSQLKRNDYHHLIQLLDAYSPLKILNRGYSVIL-KEGKAIHSVDDLAIGDMIDIR 445

Query: 489 FFDGQANAIVINKAPP 504
             DG   A +  K   
Sbjct: 446 LNDGFIKANIQTKEKS 461


>gi|222153403|ref|YP_002562580.1| exodeoxyribonuclease VII large subunit [Streptococcus uberis 0140J]
 gi|254783712|sp|B9DUT9|EX7L_STRU0 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|222114216|emb|CAR42780.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           uberis 0140J]
          Length = 442

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 145/494 (29%), Positives = 237/494 (47%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W   
Sbjct: 5   LSVSHLTKYLKMKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDENAVIQATMWASA 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ F  EEG++  VIG++  +  S  Y IIIE  +P G G L    E+ KKKL  EG 
Sbjct: 63  YKRLAFDLEEGMKINVIGRVQIYEPSGSYSIIIEEAVPDGIGALAIQFEQLKKKLTNEGF 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +P   + + VITSP+GAVIRDI+  IS RFP + +++FP KVQG+   +EI 
Sbjct: 123 FDDKHKQDLPQFVQKVGVITSPSGAVIRDIITTISRRFPGVEILLFPTKVQGEGAAEEIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V AI  S +PIIS++GHET
Sbjct: 183 ANISKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVHAIFASQLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309
           D TL+D+ AD RA TPT AAE+A PV +    S I+     +      + ++        
Sbjct: 237 DVTLSDFVADRRAATPTAAAELATPVTKADIISWISERQNRSYQATLRLLHQKRDQVMVL 296

Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L ++++  +    +    + +R+++  L+  I +
Sbjct: 297 GQSVIFRQPERLYDAYLQKIDRLHNSLLNSIKSKLSDSRQAEMTVSHRLQTMNLLSTINR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ ++   Q +   +++                                          
Sbjct: 357 YQERLMTLNQWLNVDMQK------------------------------------------ 374

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                +     T        L +   K  + RGY+ ++  +   I+  ++++T   + I 
Sbjct: 375 -----QFDQLRTRFEKAQDALLTLDTKRIVARGYSIVRQED-KIISSVKDVSTGDLLAIE 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 MRDGQIEVEVKNGN 442


>gi|85375369|ref|YP_459431.1| exodeoxyribonuclease VII large subunit [Erythrobacter litoralis
           HTCC2594]
 gi|122543430|sp|Q2N6Q7|EX7L_ERYLH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|84788452|gb|ABC64634.1| exodeoxyribonuclease VII large subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 477

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 182/526 (34%), Positives = 265/526 (50%), Gaps = 55/526 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
              +   +    SVS LS  LK  VE    +V +RGE+SG +   +SGH Y SLKD  + 
Sbjct: 6   AQSRAGDNAEPLSVSALSQMLKRTVEDRFGYVRLRGELSGVK-RAASGHMYCSLKDEKAV 64

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           ID ++WKGT  ++ F PE+G+E +  GK+TT+PG SKYQI++ESL  +G G LL  LEK 
Sbjct: 65  IDGVMWKGTTARLAFQPEDGLEVIATGKLTTYPGRSKYQIVLESLEMAGEGALLALLEKT 124

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
           +++L  EGLF+   K P+PF+P+ I V+TSPTGAVIRDIL R++ RFP  V+++PV VQG
Sbjct: 125 RQRLEAEGLFARDRKRPLPFLPRTIGVVTSPTGAVIRDILHRLADRFPSHVLVWPVLVQG 184

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
               ++++ AI     +K G   PRPD++I+ARGGGSIEDLW FN+EM+VRAIA+S IP+
Sbjct: 185 QGAAEQVSAAIRGFGAIKAGGEVPRPDLLIVARGGGSIEDLWSFNEEMVVRAIADSPIPV 244

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ISA+GHETD TLADYAAD RAPTPT AAE+AVPVK  L ++L +  AR    ++R +   
Sbjct: 245 ISAVGHETDTTLADYAADRRAPTPTAAAEIAVPVKGELAATLNDYAARQQRGVLRPLSLG 304

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L + ++ LP  +  L     +LD     L   L     +          R+    L 
Sbjct: 305 RERLEARVQRLPTIETLLQPQAQKLDERVERLRGALRDRAAKGREAL--ATQRLSPTMLQ 362

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
              ++ R+ +   Q  +   + +  R     ++       +     +  +   +  ++  
Sbjct: 363 RAEREARRKLD--QVRLAPALVER-RAARDGERLAGLSRVLATLNPRAPLERGYALVRDA 419

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             ++                                               Q        
Sbjct: 420 DGKLVRA--------------------------------------KGEATKQA------- 434

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           R+ + F DG  + +   KA    +  KK           G Q +LF
Sbjct: 435 RLAVEFADGSLDVVPAGKAAAAPKRVKKSP----PPGTSGAQEDLF 476


>gi|223986294|ref|ZP_03636306.1| hypothetical protein HOLDEFILI_03616 [Holdemania filiformis DSM
           12042]
 gi|223961733|gb|EEF66233.1| hypothetical protein HOLDEFILI_03616 [Holdemania filiformis DSM
           12042]
          Length = 443

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 143/493 (29%), Positives = 223/493 (45%), Gaps = 63/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L  +LK  ++ +  +  V V GEIS +   H SGH YF+LKD  SRI  +++   
Sbjct: 6   LSVSALVRYLKGKLDQDPLIQRVIVAGEISNFTA-HRSGHWYFTLKDEKSRISCVMFASN 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             + +F+P+EG   LV    + F  S + Q+ + ++ P+G G L    E+ K++L EEGL
Sbjct: 65  AARCKFIPKEGDSVLVQANTSIFEASGQLQLYVTAMKPTGLGDLYLKYEELKRRLHEEGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    K P+P  P  I VIT    A  +D++  ++ R+P+ +V   PV VQG+    +I 
Sbjct: 125 FDPARKKPLPQYPMRIVVITGKNTAARQDVVTTLARRWPIAQVSEIPVLVQGEGAAAQIC 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ Q +TL         D+IILARGGGSIEDLW FN+E + R +A    P+I  +GHE 
Sbjct: 185 AALRQADTL-------GFDVIILARGGGSIEDLWSFNEECVARTMAGLQTPVICGVGHEV 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNS 309
           D T+AD  AD RAPTPTGAAEMA P    +QS  +    +L  ++ +    + +      
Sbjct: 238 DVTIADLVADRRAPTPTGAAEMATPQLAEVQSHCLRQRQQLIYLMNQKLRQQRQRYQQQV 297

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             +   +    L   + RLD     L++  +  I  +    + +   + +      +   
Sbjct: 298 ESRIFQDPMSLLQPLQMRLDYDSSRLQNTTQR-IRGQRARLDQLSAVLLNQT-SRQVHLQ 355

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q + + + ++    KQ L     + KEKI +L                           
Sbjct: 356 QQRLGQLRLNLNHHEKQQLMLRQQQLKEKIRLL--------------------------- 388

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                                +++    L RGY  I   N   +   + +     + I  
Sbjct: 389 --------------------DAYSPLKILGRGYGLI-AQNGRLVRSIQEVNVNEELRIRL 427

Query: 490 FDGQANAIVINKA 502
            DGQ  A+V  K 
Sbjct: 428 HDGQIQALVKEKE 440


>gi|46907587|ref|YP_013976.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|226223962|ref|YP_002758069.1| exodeoxyribonuclease VII (large subunit) [Listeria monocytogenes
           Clip81459]
 gi|254824580|ref|ZP_05229581.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J1-194]
 gi|254852591|ref|ZP_05241939.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           R2-503]
 gi|254932324|ref|ZP_05265683.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           HPB2262]
 gi|254994131|ref|ZP_05276321.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J2-064]
 gi|300765399|ref|ZP_07075381.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL
           N1-017]
 gi|67460320|sp|Q71ZW1|EX7L_LISMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|259646295|sp|C1L2R7|EX7L_LISMC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|46880855|gb|AAT04153.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|225876424|emb|CAS05133.1| Putative exodeoxyribonuclease VII (large subunit) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258605904|gb|EEW18512.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           R2-503]
 gi|293583880|gb|EFF95912.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           HPB2262]
 gi|293593818|gb|EFG01579.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J1-194]
 gi|300513836|gb|EFK40901.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL
           N1-017]
 gi|328475075|gb|EGF45863.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 220]
          Length = 450

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +E+ +K               +L   ++    +I              
Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 430 KMQGGQIEALITAKE 444


>gi|328467499|gb|EGF38568.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           1816]
          Length = 450

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQELERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +E+ +K               +L   ++    +I              
Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 430 KMQGGQIEALITAKE 444


>gi|332311802|gb|EGJ24897.1| Exodeoxyribonuclease 7 large subunit [Listeria monocytogenes str.
           Scott A]
          Length = 451

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 358

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +E+ +K               +L   ++    +I              
Sbjct: 359 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 392

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 430

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 431 KMQGGQIEALITAKE 445


>gi|255520791|ref|ZP_05388028.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J1-175]
          Length = 450

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +  + Q +E+ +K               +L   ++    +I              
Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDDIQV 429

Query: 488 NFFDGQANAIVINKA 502
               GQ  A++  K 
Sbjct: 430 KMQGGQIEALITAKE 444


>gi|254898474|ref|ZP_05258398.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           J0161]
 gi|254912035|ref|ZP_05262047.1| exodeoxyribonuclease VII [Listeria monocytogenes J2818]
 gi|254936362|ref|ZP_05268059.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           F6900]
 gi|258608953|gb|EEW21561.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           F6900]
 gi|293590001|gb|EFF98335.1| exodeoxyribonuclease VII [Listeria monocytogenes J2818]
          Length = 450

 Score =  315 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 141/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V V GEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 5   KYLTVAAITKYIEKKFEVDPYMKQVFVHGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 64  KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  
Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L        L     R D     L +     IF K   F+ + +R+        I+
Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ +    Q +++ +K               +L   ++    ++              
Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                                L+  +  + LKRG+       N  +   + L     I +
Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429

Query: 488 NFFDGQANAIVINKA 502
               G  +A++  K 
Sbjct: 430 KMQGGHIDALITAKE 444


>gi|54293801|ref|YP_126216.1| exonuclease VII, large subunit [Legionella pneumophila str. Lens]
 gi|81822429|sp|Q5WY82|EX7L_LEGPL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|53753633|emb|CAH15091.1| Exonuclease VII, large subunit [Legionella pneumophila str. Lens]
          Length = 443

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 153/496 (30%), Positives = 234/496 (47%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S   P  +VS+L+  +K  +E+ +  V V GEIS      SSGH YF+LKD+ ++I    
Sbjct: 2   SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60

Query: 69  WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +K    + +     +G + +  GK++ +    +YQ+I+E ++ +G G L    E+ K KL
Sbjct: 61  FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGILYQRFEELKIKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+ + K  +P IP+ I +ITSPTGA I+DIL  ++ RFP+ R+II+P +VQG   
Sbjct: 121 AREGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARIIIYPSEVQGQAA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P+++ NA+   NT        R  ++ILARGGGSIEDLW FNDE + R IA S IP++S 
Sbjct: 181 PQQLVNALKLANT------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+ AD RA TPT AA    P    L + L     RL++ IIRL+K     
Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLVKGLQLK 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN L+  + +  QT+S     LD L R+L   +   I       N    R++++     I
Sbjct: 295 LNHLIDKIASPRQTISTYWQTLDYLERQLISAMTQFINLNINKMNLFSTRLQANNPKTQI 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ +  + +    + Q                                 +   + +L  +
Sbjct: 355 ERTKIQLRQLILQLTQ--------------------------------EIRIKVNQLKHQ 382

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   LS                L +        RGY  +   N   +   +       I 
Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTID 426

Query: 487 INFFDGQANAIVINKA 502
           +    G     V    
Sbjct: 427 VRLAKGSLACEVTQIK 442


>gi|223932934|ref|ZP_03624929.1| exodeoxyribonuclease VII, large subunit [Streptococcus suis
           89/1591]
 gi|223898380|gb|EEF64746.1| exodeoxyribonuclease VII, large subunit [Streptococcus suis
           89/1591]
          Length = 447

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 146/497 (29%), Positives = 233/497 (46%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   S  H YFSLKD+ + I A +W G 
Sbjct: 5   LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  EEG++  VIG+I  +  +  Y I+IE   P G G L    E+ K+ L +EGL
Sbjct: 63  YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  +P   K I VITSP+GAVI+DI+  +S RFP + ++++P KVQGD   +E+ 
Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 ANIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV K  L   L   E R    +   +++    L  +
Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL  +L+  ++ +  ++ +    +  R++       ++ 
Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQASLLLQQRLQGVHPGRKVES 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ I+++++ ++  +         +                                  
Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L        + RGY  I+  +   I    N+     + I 
Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ +  V +    +
Sbjct: 429 MKDGQLDVEVKHVQTDE 445


>gi|297539113|ref|YP_003674882.1| exodeoxyribonuclease VII large subunit [Methylotenera sp. 301]
 gi|297258460|gb|ADI30305.1| exodeoxyribonuclease VII, large subunit [Methylotenera sp. 301]
          Length = 408

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 202/374 (54%), Gaps = 8/374 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            ++K   +    +VSEL+     ++  +     V GE+S      +SGH YFSLKD+ ++
Sbjct: 7   LNEKQIRNGKILTVSELNRLANQVLTQSFPLFWVSGEVSNLT-RAASGHWYFSLKDSSAQ 65

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +  +++KG  + ++++P+EG +      +T +     +Q+ IE L  +G G L  A EK 
Sbjct: 66  VRCVMFKGRNSYLDWVPKEGDKVEARCTVTLYEARGDFQLTIEFLQRAGLGVLFEAFEKL 125

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL +EGLF    K  +P  PK I ++TSP  A +RD+L  +  R P + ++I+P  VQ
Sbjct: 126 KSKLQQEGLFDAAFKKSLPTHPKKIGIVTSPDAAALRDVLTTLKRRMPSIPIVIYPTPVQ 185

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     +IA+AI   N   E       D++I+ RGGGSIEDLW FN+E++ RAIA  SIP
Sbjct: 186 GKGVAIQIADAIQLANERAE------CDVLIICRGGGSIEDLWQFNEEIVARAIAECSIP 239

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
            IS +GHETD+T+ D+ AD+RA TPT AAE+A P +E++  +L  L+ +L+ ++   +  
Sbjct: 240 TISGVGHETDFTICDFVADVRAATPTAAAELATPSRENILGALNQLKQQLSRMMQYQLNQ 299

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +   L+ L + L +  Q +   + +L ++   L   +   +  K ++       +     
Sbjct: 300 RAQALDYLSRRLISPTQQIEQQKSQLAQMTLRLNTVMNQQVKNKQQNLLRASQNLTHLNP 359

Query: 363 IHNIQKNRQHILEK 376
              + +    +  K
Sbjct: 360 QAVLTRGYAFVQNK 373



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 58/134 (43%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           +R++IL     ++Q + + ++Y   ++ + +  L         +I    + + ++  R+ 
Sbjct: 274 SRENILGALNQLKQQLSRMMQYQLNQRAQALDYLSRRLISPTQQIEQQKSQLAQMTLRLN 333

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            +++ ++K+   ++   ++ L     +  L RGY  +Q+     I+  + L     + + 
Sbjct: 334 TVMNQQVKNKQQNLLRASQNLTHLNPQAVLTRGYAFVQNKLGTIISSSQQLRQGDDVTLT 393

Query: 489 FFDGQANAIVINKA 502
           F  G A A +    
Sbjct: 394 FGAGSAEATIDKTN 407


>gi|51245797|ref|YP_065681.1| exodeoxyribonuclease VII, large chain [Desulfotalea psychrophila
           LSv54]
 gi|50876834|emb|CAG36674.1| probable exodeoxyribonuclease VII, large chain [Desulfotalea
           psychrophila LSv54]
          Length = 448

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 138/491 (28%), Positives = 228/491 (46%), Gaps = 58/491 (11%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            P YSVSE++  +K ++E     + +RGEIS  +    SGH+YF+LKD+ ++I A+I+K 
Sbjct: 6   QPIYSVSEITGSIKTLLEGKFRFITIRGEISNLKT-PYSGHSYFTLKDDKAQIRAVIFKN 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               +    ++G + +  G+I+ +    +YQII++S+   G+G      EK KK+L E G
Sbjct: 65  QKRYLLDPLQDGKQVICHGRISLYEPRGEYQIIVDSIEGDGAGQFRQEFEKIKKRLEERG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
            F+   K  IP  P+ I +I+SPTGA I+D L+    R     + I PV+VQG++  +EI
Sbjct: 125 YFAGSSKKNIPPYPEKIVIISSPTGAAIQDFLKIYQIRQSFTHLQILPVRVQGEQAAEEI 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI   N L         D+I+L RGGGSIEDLW FN+  +  AI  S +P+++ +GHE
Sbjct: 185 AEAIRIANGL------DNIDLIVLCRGGGSIEDLWAFNEIAVAEAIHASQLPVVTGVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+T+AD+ AD RA TPTGAAEM +   E L   ++    R   I+   I +    L  L
Sbjct: 239 VDFTIADFCADARAATPTGAAEMLLADSEELGRKIMAYGNRQRAILGGQISFYQQKLKRL 298

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K+L   + ++  S + L+      +  +   + R+ +       R+K++  +H I   +
Sbjct: 299 TKSLSLIEYSVEQSSHHLELTISYFKQAMLSSMERREQKLQQGSERLKAEAPLHKIILQK 358

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +   +  +++ ++  L     +  ++                                
Sbjct: 359 QRVENLKHRLKRQIRHSLDEKKGQFSQQA------------------------------- 387

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT---SIQDTNNNFITQKRNLATKTRILI 487
                            +L S +   TL RGY     I       I+    +     I +
Sbjct: 388 ----------------ALLNSVSPLATLSRGYAVARIISTGRKEIISNSTQVKEGQEINV 431

Query: 488 NFFDGQANAIV 498
               G  +  +
Sbjct: 432 LLGQGSLDCKI 442


>gi|313897496|ref|ZP_07831039.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. HGF2]
 gi|312957866|gb|EFR39491.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. HGF2]
          Length = 442

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 222/496 (44%), Gaps = 59/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    YSVS L +++K  +++++    + ++GEIS +   H SGH YF+LKD  S+I  +
Sbjct: 1   MSQNVYSVSALVHYIKQTLDNDIRIQSILIKGEISNFTN-HRSGHWYFTLKDARSKISCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     +   L +EG++ +V   ++ +      Q+ + ++   G G L   LE+ KKKL
Sbjct: 60  MFSSHARRCNILLKEGMKVIVTASVSMYEAGGSVQLYVTAVRSDGLGDLFLQLEEVKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             +GLF  Q K P+P  P  I VIT+ TGA ++DIL  IS R+PL  V+++P  VQG + 
Sbjct: 120 AAQGLFDPQKKKPLPQYPMRIGVITAKTGAAVQDILTTISRRWPLAEVVVYPSLVQGIQA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   + + +           D+I+LARGGG IEDLW FN+E + RA+      I++ 
Sbjct: 180 SGAIVENLRKADQ-------GGHDVILLARGGGPIEDLWCFNEEAVARAVFAMHTVIVTG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL DY +D RAPTPT AAE+  P  E ++ ++  +  RL   +   +      
Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPDLEEVRMNVSLMRRRLVKDMETRLHMAKQA 292

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L             +   RY  D L    E  ++  +    +  + +   + +  +   +
Sbjct: 293 LEP-----------IRSHRYMRDPLSYIREEEMK--LAMHVQQLSIVEATVAAMAM--QL 337

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++N   +    + + Q   + +    L                  R+     +   L  R
Sbjct: 338 KQNSHKLAIHSERLFQKNTRSIAESRL------------------RLTQALHNYDTLRKR 379

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                          +   + +L +++   +L RGY      +   I+    +    R+ 
Sbjct: 380 --------------QIGNISALLDAYSPLKSLSRGYAIAYHGD-EVISSVDAVEQNDRLR 424

Query: 487 INFFDGQANAIVINKA 502
           +   DG     +  K 
Sbjct: 425 LRMQDGYLYTNIEKKE 440


>gi|46579757|ref|YP_010565.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449172|gb|AAS95824.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311233548|gb|ADP86402.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris
           RCH1]
          Length = 465

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 124/510 (24%), Positives = 212/510 (41%), Gaps = 76/510 (14%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++V EL+  ++  +E    +V V+G++S      SSGH YF+LKD  + ++ + ++G+ 
Sbjct: 4   VFTVRELTRAIRDAIEGGFPYVWVQGQVSNL-SRPSSGHLYFTLKDEEAALNCVWFRGSQ 62

Query: 74  N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
                                +      G E L  G++T +     YQ+++E    +G G
Sbjct: 63  RDAETFDPLTGEVFEDGPRPGLSRTVRNGQELLCAGRLTVYAPRGGYQLVVEMAQDAGLG 122

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLR 173
            L  A E+ K++L  +G F+ + K P+P  P+ +AV+T+P GA I D L+    R     
Sbjct: 123 RLHLAFEELKRRLSAKGYFAVERKRPLPRSPRRVAVVTAPRGAAIHDFLRIAGERGVGCE 182

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           + I PV VQG E P            + E       ++I++ RGGGS+EDLW FNDE + 
Sbjct: 183 IRIHPVPVQGAEAPP------RIAAAIAEAGRLGCAEVIVVIRGGGSLEDLWAFNDEAVA 236

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
            AI  S +P+++ +GHE D+T+AD  AD+RA TP+ AA++    +      L  LE RL+
Sbjct: 237 DAIYASPVPVLAGVGHEVDFTMADMTADVRAATPSHAAQLLWRERREFVQGLDELEMRLS 296

Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
               R        L +L +AL   +  + L     R       L    E     + +   
Sbjct: 297 RAFDRAFTTGEGRLAALERALGWLSPVRALDRYDERFAESASRLARAWEAGSRLRSQRVE 356

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            ++  ++  F    ++K +  +      +                               
Sbjct: 357 QLVAALRHSFGPEALEKRQARLQTLHASL------------------------------- 385

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
            I    T +  +  R               V      L +   +  L+RGY+ ++  +  
Sbjct: 386 -IHAGQTQLNTVERR---------------VENLGVRLAALDPEAPLQRGYSLVRGPDGR 429

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINK 501
           F+   R  A   R+ I   DG+   +V + 
Sbjct: 430 FLKSIREAAPGQRLDIVLHDGEVGTVVTSV 459


>gi|269962402|ref|ZP_06176752.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi 1DA3]
 gi|269832898|gb|EEZ87007.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi 1DA3]
          Length = 376

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/362 (33%), Positives = 201/362 (55%), Gaps = 10/362 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   
Sbjct: 21  SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 79

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E  K KL
Sbjct: 80  MFRGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 139

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF+  +K P+P  P+ + VITS TGA + DIL  +  R P L V+++P  VQG+E 
Sbjct: 140 AAEGLFAQTNKQPLPEHPRRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEEA 199

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA
Sbjct: 200 AIQIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISA 253

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D T+AD+ AD+RAPTP+ AAE+      H   +L+  + +L + +   +  +   
Sbjct: 254 VGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALVTRQHKLTSAMRYYLAQQKQQ 313

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L+  L   +    L     +LD L   L+  ++  I  + +      +R++ +  + 
Sbjct: 314 SAQLMHRLERQHPSYQLQRQTQQLDELEMRLQRAMQRFITTRQQAVERKHHRLQLNSPVK 373

Query: 365 NI 366
            +
Sbjct: 374 RL 375



 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
            +     Q ++ +Q  +   ++ +L     +  + +  L   R+    ++      + +L
Sbjct: 283 RDNSHKDQALVTRQHKLTSAMRYYLAQQKQQSAQLMHRLE--RQHPSYQLQRQTQQLDEL 340

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             R++  +   I +   +V      LQ  +    L
Sbjct: 341 EMRLQRAMQRFITTRQQAVERKHHRLQLNSPVKRL 375


>gi|47095944|ref|ZP_00233547.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           str. 1/2a F6854]
 gi|47015690|gb|EAL06620.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           str. 1/2a F6854]
          Length = 444

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 141/492 (28%), Positives = 239/492 (48%), Gaps = 60/492 (12%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+ ++ +++   E    +  V V GEIS  +   +SGH YF++KD  + + ++++   +
Sbjct: 2   TVAAITKYIEKKFEVDPYMKQVFVHGEISNLK-QPASGHLYFTVKDEFAMLRSVMFHKAV 60

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            KI F+PE+G+  LV G+I  F  + +YQ   E + P G G L   LE+ K +L +EGLF
Sbjct: 61  QKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKEGLF 120

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           ++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++I  
Sbjct: 121 AETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQKIVE 180

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD
Sbjct: 181 NIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETD 234

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  + ++ K  +L  L +
Sbjct: 235 FALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQ 294

Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L        L     R D     L +     IF K   F+ + +R+        I+  +
Sbjct: 295 HLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIELQK 354

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +    Q +++ +K               +L   ++    ++                 
Sbjct: 355 EQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA--------------- 385

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                             L+  +  + LKRG+       N  +   + L     I +   
Sbjct: 386 ------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQVKMQ 426

Query: 491 DGQANAIVINKA 502
            G  +A++  K 
Sbjct: 427 GGHIDALITAKE 438


>gi|327398311|ref|YP_004339180.1| Exodeoxyribonuclease 7 large subunit [Hippea maritima DSM 10411]
 gi|327180940|gb|AEA33121.1| Exodeoxyribonuclease 7 large subunit [Hippea maritima DSM 10411]
          Length = 488

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 142/497 (28%), Positives = 237/497 (47%), Gaps = 16/497 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSS-GHAYFSLKD-NHSRIDAI 67
           +    Y+VS+++  +K IVE N  ++ V GE+       SS GH YF+LK+ + + +  +
Sbjct: 1   MSAERYTVSQITNLIKEIVEGNFHNIWVEGEVD--SARPSSTGHLYFTLKEKDKASLKCL 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           I+K TL K++ LP++G + L  G ++ +P S +Y++I+E    +G G      +K K++L
Sbjct: 59  IFKSTLKKLKKLPQDGKQILAFGSLSIYPPSGEYRLIVEYFQDAGIGDKFIEFQKAKEEL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDEC 186
             +G FS +    IP+ PK I ++TS TGA +RDI+  I  R F   ++I+P+ VQG+  
Sbjct: 119 KAKGYFSRKRP--IPYNPKRIVLLTSTTGAAVRDIINIIKRRGFDTELLIYPITVQGESA 176

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I  AI Q+N++KE       D+++++RGGGS EDLW FND+ I   + N   P ISA
Sbjct: 177 KRSILTAIRQINSIKES-----VDVVVISRGGGSSEDLWVFNDKEIAENLFNIKFPTISA 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGH+ D TL D  ADLR  TP+ AAE+    +   + +L NL+  L+  I   I  K   
Sbjct: 232 IGHQIDITLCDMVADLRVETPSAAAEVLTNWQFKARENLYNLKRILDTSINHTISAKKEK 291

Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L   S        +  +      +D++   +  N+  ++  K +    +   I  +    
Sbjct: 292 LKLFSPKSHYLRVNSIIVNHTMHIDKIAENISSNILHLLKTKEKRMLLLKEVIYKNNPSE 351

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+  +Q I   ++ + Q +   +     +      I+         +I   +  I  L 
Sbjct: 352 KIKLTKQKINHLKESLPQFLNSLIHQKRNQLNRYSRIIAE--YSLSEKINLFNQKIVFLN 409

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             I       +    + + +    L +   KN LKRGY+   D N   I    N+     
Sbjct: 410 KAINRNSRQILNHKLSIIKMEKSRLNNLNPKNILKRGYSITFDENKKPILSVENIKKGQT 469

Query: 485 ILINFFDGQANAIVINK 501
           I      G+  + V   
Sbjct: 470 ITTLVGKGRIISTVKET 486


>gi|116629409|ref|YP_814581.1| exonuclease VII, large subunit [Lactobacillus gasseri ATCC 33323]
 gi|311110940|ref|ZP_07712337.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           MV-22]
 gi|122273653|sp|Q044H9|EX7L_LACGA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116094991|gb|ABJ60143.1| Exodeoxyribonuclease VII large subunit [Lactobacillus gasseri ATCC
           33323]
 gi|311066094|gb|EFQ46434.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           MV-22]
          Length = 456

 Score =  313 bits (802), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 150/508 (29%), Positives = 240/508 (47%), Gaps = 59/508 (11%)

Query: 10  LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            D+P Y SVS+L++++    +++  L  V ++GE+S +R    S H YFSLKD+ S+I+ 
Sbjct: 2   ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++K
Sbjct: 61  VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L +EGLF++ HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE
Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I  ++ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS
Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   +   I+ K  
Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQ 295

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L K   L    +       ++D L   L   +   +         +  R+K+    
Sbjct: 296 ILDRLRKAPVLQEPTRIYDQQIQQVDMLSHRLNQAISNQLQHDRSSVRLLQERLKALNPG 355

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                           +EQ+ ++    +        A L                     
Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTAYL--------------------- 380

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                       K     ++ T + L   +   T+ RGY    D   N +T    L    
Sbjct: 381 ------------KDQRNKLNRTMQQLDDISPLKTIGRGYVYTTDQEGNTVTSVDKLEIDE 428

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
           ++ ++F DGQ    V N    K+   +K
Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456


>gi|212703018|ref|ZP_03311146.1| hypothetical protein DESPIG_01056 [Desulfovibrio piger ATCC 29098]
 gi|212673606|gb|EEB34089.1| hypothetical protein DESPIG_01056 [Desulfovibrio piger ATCC 29098]
          Length = 497

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 126/511 (24%), Positives = 216/511 (42%), Gaps = 53/511 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK-GT 72
             SV+EL+  ++  +E     V VRGEI        SGH YF+LKD  +++  + ++   
Sbjct: 10  ILSVTELTDRMRRTLEGTFPFVWVRGEIGEL-SFPGSGHIYFTLKDAGAQLQCVWFRDRQ 68

Query: 73  LNKIEFLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115
           +    F P                  +G E    G+I+ +    +YQ+I+E +   G G 
Sbjct: 69  MRGRNFDPLTGEIFAEPRPDPVRLLRQGSELFCAGQISVYGPRGRYQLIVELVQAGGQGL 128

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRV 174
           L  A E+RK+ L   G F+ + K P+P  P  +A++TSP GA I D ++  S R     V
Sbjct: 129 LAQAFEERKQALAARGFFAAERKRPLPASPSRVALVTSPAGAAIHDFMELASVRGLGAEV 188

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FPV+VQG+    +I  A+ ++N     +      + ++ RGGGS+EDLW FN+E +  
Sbjct: 189 RLFPVRVQGEGAAGQICRALDEINRQGWAQ------VAVIIRGGGSLEDLWCFNEEEVAT 242

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           AI  S IP+++ IGHE D TLAD  AD+RA TP+ AA++  P++      L  L   L  
Sbjct: 243 AIFASKIPVLAGIGHEVDVTLADMTADVRAATPSHAAQLLWPLRREYWQRLDELSLALER 302

Query: 295 IIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
                ++ + + L    + L   +  + L  +  +L +  + L    E ++  + +   H
Sbjct: 303 ARQGWLQRQEDRLRRCERGLRLCSPARRLEGAELQLRQWQQRLLQAGERLLRDREQRLQH 362

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
              R+++      +   +Q +   +Q +       +R      ++    L  L ++  +R
Sbjct: 363 SQERLRALTGPGRLAHLQQRLALLEQKVGNAAHLLVRGREQVVRDYTRDLARLGQEAASR 422

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
                                        +      L +      L RGY  ++      
Sbjct: 423 -------------------------RGHELECLELRLAACNPLAPLGRGYAVVRTAKGRV 457

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +           + I   DG+  A V    P
Sbjct: 458 LASAGQGRAGQDVRILLQDGELEARVTAVHP 488


>gi|81428292|ref|YP_395292.1| exodeoxyribonuclease VII large subunit [Lactobacillus sakei subsp.
           sakei 23K]
 gi|123728662|sp|Q38XU8|EX7L_LACSS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|78609934|emb|CAI54981.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 449

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 149/497 (29%), Positives = 232/497 (46%), Gaps = 60/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   E +  L  V + GEIS +R   ++ H YFSLKDN ++I AI++K  
Sbjct: 8   LTVTALTQYLKAKFERDPYLDRVYLTGEISNFRLRPNA-HQYFSLKDNKAKISAIMFKSA 66

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F PEEG++ L++G+I+ +  S  YQI +E + P G G L  A E+ K KL  EGL
Sbjct: 67  FEKVKFTPEEGMKVLIVGRISLYEASGNYQIYVERMEPDGLGALYQAYEQLKAKLATEGL 126

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    + P+   PK IAVITSP+GAVIRDI+     R+P+ ++++FP  VQGD     + 
Sbjct: 127 FDAPKQ-PLVRFPKRIAVITSPSGAVIRDIITTTQRRYPIAQLVLFPAVVQGDGAADVLV 185

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             + Q+N           D II+ RGGGSIEDLW FN+E + RAI  S IP+IS++GHET
Sbjct: 186 ERLKQVN------EHGDFDTIIIGRGGGSIEDLWPFNEERVARAIVASQIPVISSVGHET 239

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQ--SSLINLEARLNNIIIRLIKYKINTLNS 309
           D T+AD  AD+RA TPT AAE+A PV            L           +  K      
Sbjct: 240 DTTIADLVADVRAATPTAAAELATPVLTDEILKLQQQRLRLYQAFSKTVALNKKQLDHLQ 299

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               L    +        +D+L R L    + ++  + +    +  R+ +   +  +++ 
Sbjct: 300 NSYVLKQPKRLYDGYLQNVDQLQRRLLTAQQQLLKDRRQQVQLLQQRLMAQSPLMAVRQA 359

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++ + E+Q+ + Q +                 L   R Q   ++                
Sbjct: 360 QKDVTEQQRRLNQAM---------------NRLMADRRQKAAQV---------------- 388

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                              L   +    L RG+  + D     + +  +  T+  I ++ 
Sbjct: 389 ----------------IAALDLVSPLKILGRGFAYVTDDQQQMLKKVADFKTQQPIELHV 432

Query: 490 FDGQANAIVINKAPPKE 506
            DG   A V+     +E
Sbjct: 433 QDGLVTAEVVATHKGEE 449


>gi|134298936|ref|YP_001112432.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum reducens
           MI-1]
 gi|134051636|gb|ABO49607.1| Exodeoxyribonuclease VII large subunit [Desulfotomaculum reducens
           MI-1]
          Length = 398

 Score =  313 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 127/361 (35%), Positives = 201/361 (55%), Gaps = 12/361 (3%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              SVS+L+ ++K  +ES+  L+++ V+GEIS  + +HSSGH Y +LKD    +  ++++
Sbjct: 2   KILSVSDLTKYIKRKLESDSFLANIWVKGEISNLK-LHSSGHIYLTLKDKECCLKVVMFR 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F PE G+  ++ G ++ +     YQ+  E++ P G G L  ALE+ K+KL  +
Sbjct: 61  SRARGLVFRPENGMSVIIQGYLSVYERDGSYQLYAEAMEPDGVGALYIALEQLKQKLSAQ 120

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G F  + K PIP +PK+I ++TSPTGA I+D+L  I  R+P + +I+ PV VQG+     
Sbjct: 121 GYFDKERKRPIPRVPKVIGIVTSPTGAAIQDMLNIIGRRWPNVHIIVAPVLVQGEGAANS 180

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I+  I+Q+N L         D+II+ RGGGS+E+LW FN E +  AI  S IP+ISA+GH
Sbjct: 181 ISRGIIQMNHL------GTVDVIIVGRGGGSLEELWAFNTEAVAMAIVQSKIPVISAVGH 234

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+T+AD  ADLRAPTP+ AAE+ VP  + +   L  LE RL   +   ++     +  
Sbjct: 235 ETDFTVADMVADLRAPTPSAAAELVVPDGKEMSRYLETLEKRLAKGMGGYLERAQQRVVK 294

Query: 310 LLKALPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
            L         L     +  LD L   L    ++ I  +     ++  ++     +  + 
Sbjct: 295 CLAIPSMQRPFLITGNRQQTLDTLTSNLYRAGKLCIADRTTQLANLAGKLNVLSPLATLS 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 14/136 (10%), Positives = 41/136 (30%), Gaps = 2/136 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++  +++   ++ +             +++    +     ++           +  L + 
Sbjct: 264 KEMSRYLETLEKRL--AKGMGGYLERAQQRVVKCLAIPSMQRPFLITGNRQQTLDTLTSN 321

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       I    T ++     L   +   TL RGY     T    ++  + +A    + 
Sbjct: 322 LYRAGKLCIADRTTQLANLAGKLNVLSPLATLSRGYGICTTTGGEIVSDTKGVAVGQTVQ 381

Query: 487 INFFDGQANAIVINKA 502
           +    G+    V  K 
Sbjct: 382 VVLHKGKLLCQVEEKT 397


>gi|326803322|ref|YP_004321140.1| exodeoxyribonuclease VII, large subunit [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650635|gb|AEA00818.1| exodeoxyribonuclease VII, large subunit [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 461

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 150/513 (29%), Positives = 238/513 (46%), Gaps = 66/513 (12%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58
           MN    +        SVS+L+ ++K   + +  +  V + GE+SG+R    + H YF LK
Sbjct: 1   MNDAQDQ------YLSVSQLTKYIKAKFDRDPYMQSVHLVGEVSGFRNRGKNKHQYFGLK 54

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D+ + I AII++GT +K  F  E+G++  VIG+++ +  + +Y III+ + P G G    
Sbjct: 55  DDDAYISAIIFRGTFSKHNFDLEDGMKVQVIGRLSLYEKTGRYSIIIDHIQPDGIGQFYV 114

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
             E+ K+KL EEGLF+ +   PIP  PK IAV+TSP+GAVIRDI+     R+P ++++++
Sbjct: 115 RFEQLKQKLGEEGLFTFE-AKPIPKYPKRIAVVTSPSGAVIRDIITTARRRYPVVQIVLY 173

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQG E  K I   I +        +    D II+ RGGGSIEDLW FN+E +VRAIA
Sbjct: 174 PTVVQGQEAAKSIVRNIER------ADSSGAYDTIIVGRGGGSIEDLWCFNEEEVVRAIA 227

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+IS+IGHETD TL+DY +D RA TPT AAE+A PV   L  ++ + + RL  I +
Sbjct: 228 ACQTPVISSIGHETDTTLSDYVSDQRAATPTAAAELATPVLNDLVFTINDYKQRLIQIQL 287

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + Y    L  +  +      ++     R +L  L   L   +   ++++ R    I +
Sbjct: 288 NRLNYFKQRLEQVKSSYLFKQPEKMYDGYRLKLADLDSRLNDLVSNKVYQEERRLRQIQS 347

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            ++       + +N+  +    + + Q                              +  
Sbjct: 348 ELQGLSPKVLVLENKHKLASLGESLRQGQG-------------------------QLLER 382

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
            H  ++                           L   +    L  GY  +   N   I  
Sbjct: 383 KHYQLQ----------------------QLAGKLDLLSPLKRLSGGYVYL-SKNQVPIES 419

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
              +A   ++ +   DG  N+ +I       QP
Sbjct: 420 VDQVAIGDKVQLRLADGYLNSQIIGSKKEALQP 452


>gi|332704075|ref|ZP_08424163.1| Exodeoxyribonuclease 7 large subunit [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554224|gb|EGJ51268.1| Exodeoxyribonuclease 7 large subunit [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 459

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 130/508 (25%), Positives = 214/508 (42%), Gaps = 72/508 (14%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V EL+  LK +VE     V V+G++S       SGH YFSLKD  + +  + +K   
Sbjct: 4   IFRVRELTQALKDVVEGQFPFVWVKGQVSNL-SRPGSGHIYFSLKDEEAVLSVVWFKS-N 61

Query: 74  NKI-----------------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
             +                   + EEG + L  G++T +P    YQ++ E +   G G L
Sbjct: 62  QWLGGEGCVNPLTGEICEGPPLMLEEGKDVLCAGRLTVYPPRGTYQLVAELVQERGVGRL 121

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVI 175
             A E  K+ L  +G F    K  +P  P+ +AV+T+P GA IRD L   S R    ++ 
Sbjct: 122 YQAFEALKQDLQAKGYFDQDRKMVLPRHPQRVAVVTAPGGAAIRDFLCIASERGLSSQIR 181

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           I PV VQGD  P +IA A+  +N           ++++L RGGGS+EDLW FN + +  A
Sbjct: 182 IHPVLVQGDLAPAQIAQALEAINADGWA------EVVVLIRGGGSLEDLWAFNTKRVADA 235

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +  S IP+++ IGHE D T+AD  AD RA TPT AA++  P +  L   + +LE      
Sbjct: 236 LYASRIPVLAGIGHEVDTTIADMVADRRAATPTHAAQILWPERRELLQMVDDLE------ 289

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
                                    L      +DR                  H   ++ 
Sbjct: 290 -------------------IRLQARLKDCMQEMDR------------------HVAVLVK 312

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            +     +  +++  + +   ++ +     Q +R         +A L   R+   +R   
Sbjct: 313 ALGWLSPVRRMERMEERLKHDRERLSMSAWQMMRRKQDILGSLVAALG--RQYGSDRWAM 370

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474
           L   ++ L  R+       + +  + + +    L+S   +  L RGY+ ++      F+ 
Sbjct: 371 LGGRVELLSMRLAEGGKRALDTVDSDLRMMETRLESLDPEKPLARGYSLVRVERTGRFLR 430

Query: 475 QKRNLATKTRILINFFDGQANAIVINKA 502
              ++A   R+ I    G   A+V+   
Sbjct: 431 DPDDVAPDDRLEIRVSKGLVPAVVVKGK 458


>gi|303247301|ref|ZP_07333575.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio
           fructosovorans JJ]
 gi|302491460|gb|EFL51348.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio
           fructosovorans JJ]
          Length = 478

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 123/515 (23%), Positives = 205/515 (39%), Gaps = 74/515 (14%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + VSEL+  +K +VES    V VRG++        SGH YFSL+D  + +  + ++G  
Sbjct: 4   VFEVSELTRSVKDVVESEFPFVWVRGQVVNL-SRPGSGHLYFSLRDAEASLAVVWFRGAQ 62

Query: 74  --------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
                                 +     +G+E +V G++T +     YQ++ E +   G 
Sbjct: 63  GGKALAGGGRYDPLTGEVFEESLAKSLADGMEIMVAGRLTVYAPRGVYQLVAELVQEVGE 122

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPL 172
           G L    E  KK+L  +G F+ + K  +P  P  +AV+T+P GA +RD ++    R    
Sbjct: 123 GRLWQEFEALKKELAAKGYFAQERKRALPRHPLRVAVVTAPAGAAVRDFIRIGRERGHGA 182

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
            V I+P  VQGD  P  I  A+L+  +          ++++L RGGGS+EDLW FN   +
Sbjct: 183 AVRIYPTLVQGDAAPVGIVRAMLRAVSDDWA------EVLVLIRGGGSLEDLWAFNTPEV 236

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
             AI  S +P+++ +GHE D T+AD  AD+RA TP+ AA++  P +  L   L +LE   
Sbjct: 237 AGAIFASPLPVVTGVGHEVDVTIADMVADVRAATPSHAAQLLWPERAQLTQRLDDLEMAA 296

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              + RL+  +   L +L + L          R RL RL          +          
Sbjct: 297 RRGMARLVAMRERELVALARGLAWLSP-----RQRLARLDESFAGAAARLTRAGNGWLGK 351

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
              R+ +       Q     +  +++ + +                              
Sbjct: 352 FAARLDAVAAKMAGQYGPHSLEAREESLSRR----------------------------- 382

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NN 471
                        R+   L   +      + +    L        L RGY+    +    
Sbjct: 383 -----------TERLGNALRFFLAGRENRLDLAAAELAGLDPMGPLARGYSLTTLSRTGK 431

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           F+ +  +      + I  + G+  A V + AP   
Sbjct: 432 FLRRAGDARPGDNLSIMVYAGRVEARVTDVAPAPA 466


>gi|238852558|ref|ZP_04642968.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           202-4]
 gi|238834704|gb|EEQ26931.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           202-4]
          Length = 456

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 149/508 (29%), Positives = 238/508 (46%), Gaps = 59/508 (11%)

Query: 10  LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            D+P Y SVS+L++++    +++  L  V ++GE+S +R    S H YFSLKD+ S+I+ 
Sbjct: 2   ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++K
Sbjct: 61  VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L +EGLF++ HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE
Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I  ++ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS
Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL       I+ K  
Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAATQANIRAKRQ 295

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L K   L    +       ++D L   L   +   +         +  R+K+    
Sbjct: 296 ILDRLRKAPVLQEPTRIYDQQIQQVDMLSHRLNQAMSNQLQHDRSSVRLLQERLKALNPG 355

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                           +EQ+ ++    +          L   R                 
Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTTYLKDQR----------------- 384

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                             ++ T + L   +   T+ RGY    D   N +T    L    
Sbjct: 385 ----------------NKLNRTMQQLDDISPLKTISRGYVYTTDQEGNTVTSVDKLKIDE 428

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
           ++ ++F DGQ    V N    K+   +K
Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456


>gi|238854803|ref|ZP_04645133.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           269-3]
 gi|260664034|ref|ZP_05864887.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           SJ-7A-US]
 gi|282933881|ref|ZP_06339229.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           208-1]
 gi|238832593|gb|EEQ24900.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           269-3]
 gi|260561920|gb|EEX27889.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           SJ-7A-US]
 gi|281301970|gb|EFA94224.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii
           208-1]
          Length = 453

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 134/501 (26%), Positives = 236/501 (47%), Gaps = 58/501 (11%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              SVS+L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  ++I+ ++++
Sbjct: 6   KYLSVSDLNYYINLKFKNDPYLHQVFLKGELSNFRYRRNS-HQYFSLKDEKAKINVVMFR 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               K++F PEEG++  V G I  +P    YQ   +++ P+G G L   L + ++KL +E
Sbjct: 65  SAFEKLKFKPEEGMKVYVSGYIGVYPPQGSYQFYAQTMEPAGLGELYERLRQLQEKLSKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQG+     
Sbjct: 125 GLFAAEHKKRLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGETAAAS 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           + NA+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR++ +  +P+IS++GH
Sbjct: 185 LVNAMEQIKERADE-----YDVMIIGRGGGSLEDLWPFNEEEVVRSVYSMPMPVISSVGH 239

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD TL D  AD RA TPT AAE A P      + L  L++RL   +   I+ +   L  
Sbjct: 240 ETDTTLCDLVADARAATPTAAAEYATPNLSDELAGLHQLQSRLLTSMQSCIRERKQALQR 299

Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           +     +    +        +D+L   L   +++I+    ++      ++ +      ++
Sbjct: 300 IQNSPIMREPMRLYDQQAQSVDQLAGRLMQIIKVILQNNRQNLKISEQKLLAQSPKRLLE 359

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +Q      Q +   +K  L+      ++                              
Sbjct: 360 RTKQSNDYLNQRLFSAMKTFLKDKRTLFQQ------------------------------ 389

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                              + L+  +    L RGY    +     +   +N+A    + +
Sbjct: 390 -----------------QVQTLEDISPLKVLGRGYIYTSNQAGETVMSVKNIAKDEVLNL 432

Query: 488 NFFDGQANAIVINKAPPKEQP 508
           +F DG A A ++     +   
Sbjct: 433 HFADGNAEAKILEVEDNENAK 453


>gi|89069372|ref|ZP_01156731.1| exodeoxyribonuclease VII, large subunit [Oceanicola granulosus
           HTCC2516]
 gi|89045139|gb|EAR51210.1| exodeoxyribonuclease VII, large subunit [Oceanicola granulosus
           HTCC2516]
          Length = 420

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 158/420 (37%), Positives = 237/420 (56%), Gaps = 7/420 (1%)

Query: 1   MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+   + +   +  E++VSE+S  +K  +E     + VRGE+ G      SGH YF +KD
Sbjct: 1   MDLIDEPQPGRNLAEFTVSEISGAVKRALEDQFGRIRVRGEV-GRVFKARSGHLYFDVKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + S +   IW+G L  +  +PEEG+E +V G+++ F G SKY +I++ +  +G G L+  
Sbjct: 60  DKSVLACNIWRGQLAGLSVMPEEGLEVVVTGRLSAFGGQSKYNMIVDEVAVAGVGALMAM 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
            EKRKK L  EGLF+ + K P+P++P++I V+TSP GAVIRDIL R+  RFP +V+++PV
Sbjct: 120 FEKRKKALEAEGLFAPECKRPLPYLPEVIGVVTSPQGAVIRDILHRLRERFPRKVLVWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG  C  E+A AI   N L  G   PRP+++I+ARGGGSIEDLW FN+E + RA A S
Sbjct: 180 AVQGKACAPEVARAIAGFNALTPGGALPRPELLIVARGGGSIEDLWGFNEEAVARAAAAS 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP+ISA+GHETD TL D+ AD RAPTPT AAEMAVPV+  L   +    ARL+  + + 
Sbjct: 240 TIPLISAVGHETDTTLIDHVADRRAPTPTAAAEMAVPVRLELLGWVDGQAARLSRALGQG 299

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L  L + L   +  L     R D   R L   L   + RK   F+H    ++ 
Sbjct: 300 LLGRGQRLRDLGRVLGRPEALLERPSQRFDGQERRLVGALRGAMDRKRARFSHAAGALRP 359

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             +   +   R+ + +    +   + + +R     ++ +       R   +  +  L   
Sbjct: 360 GAVRGRVADGRRRLGDCGGRLVPALGRGVR-----QRRRDYEACAGRLAPERLLVRLGQR 414



 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/99 (9%), Positives = 27/99 (27%), Gaps = 13/99 (13%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +  +   + + + Q      L + +++  L  +  + +  +            R+   L 
Sbjct: 285 VDGQAARLSRALGQG----LLGRGQRLRDLGRVLGRPEALLERPSQRFDGQERRLVGALR 340

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
             +       S     L+         RG    +  +  
Sbjct: 341 GAMDRKRARFSHAAGALR---PGAV--RG----RVADGR 370


>gi|29654546|ref|NP_820238.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii RSA 493]
 gi|29541813|gb|AAO90752.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii RSA 493]
          Length = 414

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 218/381 (57%), Gaps = 10/381 (2%)

Query: 1   MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+   ++ SL+     Y+VS+L+   + ++E     + + GEIS      +SGH YFSLK
Sbjct: 1   MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  +++    ++    ++ F PE G   LV  +I+ +     +Q+I+  +  +GSG L  
Sbjct: 60  DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
           A EK K++L +EGLF+ ++K PIP  P  I VITS +GA IRD+L+ ++ RFP + +I++
Sbjct: 120 AFEKLKQRLEKEGLFAPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISIIVY 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQGD+  ++IA+AI + ++ KE       D++++ RGGGS+EDLW FN+E + RAI 
Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           +  IP+++ +GHE D+T+AD+ AD RA TP+ AAEM  P ++     + + + RL + I 
Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             +++    L  L+  L   DQ L   R +++ L   L   ++    R++++       +
Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRHQNLAAKAQAL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQ 378
           ++   +  +++    +  + Q
Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 1/143 (0%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  +  NR+  L+     ++ ++  +       + ++  L    ++   R+     
Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            I+ L  R+   + +     H +++   + LQ+ +   TLKRGY  +   N   + + + 
Sbjct: 323 QIEALQHRLMMAMDYDFNRRHQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381

Query: 479 LATKTRILINFFDGQANAIVINK 501
           L    +I     +GQ +  V   
Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404


>gi|257063923|ref|YP_003143595.1| exodeoxyribonuclease VII, large subunit [Slackia heliotrinireducens
           DSM 20476]
 gi|256791576|gb|ACV22246.1| exodeoxyribonuclease VII, large subunit [Slackia heliotrinireducens
           DSM 20476]
          Length = 519

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 115/495 (23%), Positives = 197/495 (39%), Gaps = 17/495 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VSE     K  +E     V + GE+S          AYF++KD  + +  ++W    
Sbjct: 39  PLTVSEAMNLAKGALEHI--TVTIVGEVSEVNVKRGYKAAYFTVKDASAALPCMMWFNRY 96

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +K +     G++  + G+ T +P   +    + +L  +G G L   +    +KL  EGL 
Sbjct: 97  DKTD-GVTIGMKVEMTGRFTLYPKQGRMNFDVFTLKQAGEGDLRKKVADLARKLQNEGLM 155

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
               K P+P  P+ I V+TSP G  + D+L+ +  RFP+  V +  V V+G+   + +  
Sbjct: 156 DPARKVPVPAFPERIGVVTSPRGDAVHDVLRTLRRRFPVATVQVAGVPVEGEHAAEYMIE 215

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +             + D+I+L RGGGS E+L  FNDE + RAI    IPI++ IGHE D
Sbjct: 216 GLRACYRA-------KVDVILLVRGGGSFENLMPFNDEALCRAIVACPIPIVTGIGHEPD 268

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD+R  TPTGAA    P ++ L+ +     A L + +   I      +     
Sbjct: 269 TTIADMVADVRQSTPTGAALFVSPSQDMLEETFGTYAASLASGVQYAIDRAAMNVRRAED 328

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                +     +     LD     LE  L           +    R+ +  L      +R
Sbjct: 329 RPLFKDPHTLFATDELTLDMTQDRLERLLAGATVPFATQVDTAAARL-ARSLEATTAPHR 387

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             +      + + +         + +   A L          I    T +  L  R+  +
Sbjct: 388 NQLDVAAGRLTRSLAGATTPFERDLEVTSARLA---RALPLGISRDKTAVDTLEARMRTV 444

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +   +  ++++   +   +    L RGY    D   + +     +    RI +   
Sbjct: 445 AGGMLDPFNHELALSAGRMHDLSPLTVLSRGYAMATDGEGHVVKNVDQVKPGDRIEVRVS 504

Query: 491 DGQANAIVINKAPPK 505
           DG  +  V    P +
Sbjct: 505 DGSLDCTVDALQPAE 519


>gi|150016577|ref|YP_001308831.1| exodeoxyribonuclease VII large subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|189037850|sp|A6LU45|EX7L_CLOB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|149903042|gb|ABR33875.1| exodeoxyribonuclease VII, large subunit [Clostridium beijerinckii
           NCIMB 8052]
          Length = 399

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 217/376 (57%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +VSE++ ++K +++++   S++ V+GEIS  +  HSSGH YF+LKD+  RI+ +
Sbjct: 1   MNIKTLTVSEVTNYIKRMLDNDFILSNLSVKGEISNLK-YHSSGHIYFTLKDSSGRINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG+E ++ G+ + +P +  +Q+  + +   G G L    EK K+KL
Sbjct: 60  MFKSNAVLLDFPLEEGMEVIIKGRASIYPATGSFQLYCDEIRKEGLGDLFIKFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EG F + +K  +P  P+ I ++TSPTGA IRDI+   + R   + V+++P KVQG   
Sbjct: 120 SKEGYFDEAYKKELPKYPQRIGIVTSPTGAAIRDIINVSTRRSSLVDVVLYPAKVQGSGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            K+I + I   N           DIII+ RGGGSIE+LW+FN+E + +AI NS IPIISA
Sbjct: 180 YKDIISGINYFNR------KKSVDIIIVGRGGGSIEELWNFNEEELAKAIFNSKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ AD+RA TP+  AE+AVP+ ++++  L+++   L+  I   +    N 
Sbjct: 234 VGHEIDFTICDFVADVRAATPSQGAEIAVPLSDNIKDRLLDISKNLDKYISDRLDTCRNN 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+   + L   +    +S S   +DRL   L   +   I  +     ++ N + +   I 
Sbjct: 294 LSGAQRILKVHSPMAKISNSYLEVDRLQDRLNFAMRTKIKGEKNKVENLNNLLFAHNPIK 353

Query: 365 NIQKNRQHILEKQQHI 380
            I K    I + + +I
Sbjct: 354 VISKGYAIIKDNENNI 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 2/126 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +  +L+  +++++      R          A   +       +I   +  + +L  R+ F
Sbjct: 269 KDRLLDISKNLDK--YISDRLDTCRNNLSGAQRILKVHSPMAKISNSYLEVDRLQDRLNF 326

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  KIK     V     +L +      + +GY  I+D  NN IT K  L     I +  
Sbjct: 327 AMRTKIKGEKNKVENLNNLLFAHNPIKVISKGYAIIKDNENNIITSKEQLNEDKNIEVIL 386

Query: 490 FDGQAN 495
            DG   
Sbjct: 387 KDGNIE 392


>gi|256843406|ref|ZP_05548894.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           125-2-CHN]
 gi|293380302|ref|ZP_06626376.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           214-1]
 gi|256614826|gb|EEU20027.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           125-2-CHN]
 gi|290923117|gb|EFE00046.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           214-1]
          Length = 455

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   E + P+G G L   L++ + KL
Sbjct: 61  MFRSFFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFDPEHKKKLPHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVRAMRQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYAMQMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L ++L   +  +I+ K   
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDEIAHIKQLTSQLVASMQNIIRSKRER 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+ +     L    +       ++D+L + L+++++  +    + +  +  R+ S     
Sbjct: 296 LSRVQNSVILREPTRLYDQQIQQVDQLKQRLQNSMQNRLTHSVQGYQLLKQRLFSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +Q     QQ +   ++                                       
Sbjct: 356 RIGQMQQQEHFLQQRLIDNMQH-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+   S +   + L  ++   TL+RG+    D     I+  + +     
Sbjct: 378 ---------YLKNKRNSFTQVMQQLDDYSPLKTLERGFVYSTDEQGKTISSVKQVQKDDH 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DGQ  A+V    
Sbjct: 429 LRLHFKDGQVEAVVTKVK 446


>gi|295693202|ref|YP_003601812.1| exodeoxyribonuclease vii, large subunit [Lactobacillus crispatus
           ST1]
 gi|295031308|emb|CBL50787.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           ST1]
          Length = 455

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   E + P+G G L   L++ + KL
Sbjct: 61  MFRSFFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  +HK  +   P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFDPEHKKKLSHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVRAMRQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYAMQMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L ++L   +  +I+ K   
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDEIAHIKQLTSQLVASMQNIIRSKRER 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+ +     L    +       ++D+L + L+++++  +    + +  +  R+ S     
Sbjct: 296 LSRVQNSVILREPTRLYDQQIQQVDQLKQRLQNSMQNRLTHSVQGYQLLKQRLFSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +Q     QQ +   ++                                       
Sbjct: 356 RIGQMQQQEHFLQQRLIDNMQH-------------------------------------- 377

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+   S +   + L  ++   TL+RG+    D     I+  + +     
Sbjct: 378 ---------YLKNKRNSFTQVMQQLDDYSPLKTLERGFVYSTDEQGKTISSVKQVQKDDH 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DGQ +A+V    
Sbjct: 429 LRLHFKDGQVDAVVTKVK 446


>gi|312862715|ref|ZP_07722955.1| exodeoxyribonuclease VII, large subunit [Streptococcus vestibularis
           F0396]
 gi|322516630|ref|ZP_08069544.1| exodeoxyribonuclease VII large subunit [Streptococcus vestibularis
           ATCC 49124]
 gi|311101575|gb|EFQ59778.1| exodeoxyribonuclease VII, large subunit [Streptococcus vestibularis
           F0396]
 gi|322124900|gb|EFX96324.1| exodeoxyribonuclease VII large subunit [Streptococcus vestibularis
           ATCC 49124]
          Length = 442

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 146/494 (29%), Positives = 232/494 (46%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ +LK   + +  L  V + G++S +R   S  H YFSLKD  + I A IW G 
Sbjct: 5   LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ +KKL  EG 
Sbjct: 63  FKKLGFDLEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGVGALALQFEQLRKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  ++ RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDERHKRGLPNFVKKIGVVTSPSGAVIRDIITTVNRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V++I  S +P+IS++GHET
Sbjct: 183 ENIQKANQR------DDLDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  K      +   + R     +R I+Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKSDTLVWIRERQNRAYQACLRRIQYNQERLAKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       ++D+L   LE  ++    RK +    + +R++   L+ +++ 
Sbjct: 297 SQSVVFRQPERLYDGYLQKIDQLTARLEVFIKQDFERKQKEVALLSHRLQGLNLLTSVEN 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +      Q+                                                + 
Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
               + +      +      L S      + RGY  + +  +  +T  +++    ++ I 
Sbjct: 370 TTTKNTLNGYRVRLEKAQDALLSLDTSRIVARGYAIV-NKGDKPLTTIKDITEGDQLTIQ 428

Query: 489 FFDGQANAIVINKA 502
             DG+    V N  
Sbjct: 429 MRDGELEVEVKNVN 442


>gi|160934294|ref|ZP_02081681.1| hypothetical protein CLOLEP_03165 [Clostridium leptum DSM 753]
 gi|156866967|gb|EDO60339.1| hypothetical protein CLOLEP_03165 [Clostridium leptum DSM 753]
          Length = 406

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 209/362 (57%), Gaps = 11/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +   +VS+L++++K +++ N  L  V + GEIS +   + SGH YFSLKD  S I  +++
Sbjct: 2   NQVITVSQLNFYIKSLLDGNDALKQVFLTGEISNFTDHYRSGHFYFSLKDEKSVIKCVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
               +++ F PE+G++ LV G ++ +  S +YQ+ +E + P G G L  A E+ K+KL +
Sbjct: 62  SRYSSRVRFHPEDGMKVLVRGGVSVYEASGQYQLYVEDMRPEGIGALNLAFEQLKQKLEK 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLFS Q K PIP  P  + VITSPTGA ++DI   +  R P   +I  PV VQG+E P 
Sbjct: 122 EGLFSPQRKRPIPPFPSRVGVITSPTGAAVQDIKSILGRRDPAAEIIFCPVLVQGEEAPG 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++ +A+ ++N +      P  D++I+ RGGGS+EDLW FNDE + R I+ S IP+ISA+G
Sbjct: 182 QLIDAVKRMNRI------PDIDVLIIGRGGGSLEDLWAFNDESLARTISQSRIPVISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+ D+AADLRAPTP+ AAE+AVP     Q+  + +  +L   +   I  +   ++
Sbjct: 236 HETDFTICDFAADLRAPTPSAAAELAVPDMREYQAYFLQVCRKLKQAVSSRISAEKARVD 295

Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
             +    + +    +   R  LD +   L     + + +     + I  ++ +      +
Sbjct: 296 WSVNRPAMRSPLHFIEQKRILLDTVSNRLNQGFLLRVSKAENRLSVISGKLDALSPFRVL 355

Query: 367 QK 368
            +
Sbjct: 356 GR 357



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 6/159 (3%)

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR- 412
              +++       +     + E Q +  Q+ ++  + +      + A +     +   R 
Sbjct: 246 AADLRAPTPSAAAELAVPDMREYQAYFLQVCRKLKQAVSSRISAEKARVDWSVNRPAMRS 305

Query: 413 ----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
               I      +  +  R+      ++      +S+ +  L + +    L RGY+ +   
Sbjct: 306 PLHFIEQKRILLDTVSNRLNQGFLLRVSKAENRLSVISGKLDALSPFRVLGRGYSLVL-K 364

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
             + I    +L     I +   DG+A   VI   P  ++
Sbjct: 365 QGSLIKTVNDLKKDDGITVKLSDGEAKCQVIGVLPESKE 403


>gi|300361961|ref|ZP_07058138.1| exodeoxyribonuclease VII large subunit [Lactobacillus gasseri
           JV-V03]
 gi|300354580|gb|EFJ70451.1| exodeoxyribonuclease VII large subunit [Lactobacillus gasseri
           JV-V03]
          Length = 456

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 148/508 (29%), Positives = 238/508 (46%), Gaps = 59/508 (11%)

Query: 10  LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            D+P Y SVS+L++++    +++  L  V ++GE+S +R    S H YFSLKD+ S+I+ 
Sbjct: 2   ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++++    K++F PEEG++  V G +  +     YQ   +++ P+G G L   L + ++K
Sbjct: 61  VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L +EGLF++ HK  +P  P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE
Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I  ++ Q+          + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS
Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD TLAD  AD RA TPT AAE A P    + + ++ L ARL   +   I+ K  
Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQ 295

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L     L    +       ++D L   L   +   +         +  R+K+    
Sbjct: 296 ILDRLRNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMSNQLQHDRSGVRLLQERLKALNPG 355

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                           +EQ+ ++    +          L   R                 
Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTTYLKDQR----------------- 384

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                             ++ T + L   +   T+ RGY    D   N +T    L    
Sbjct: 385 ----------------NKLNRTMQQLDDISPLKTISRGYVYTTDQEGNTVTSVDKLEIDE 428

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511
           ++ ++F DGQ    V N    K+   +K
Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456


>gi|323466276|gb|ADX69963.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus helveticus H10]
          Length = 447

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 134/498 (26%), Positives = 240/498 (48%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            D+   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD  
Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L++RL   +   I  K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +       ++D L + L+++++  +    +++  +  R+ S     
Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I   +Q      + +   +K +                                     
Sbjct: 356 QIAGMKQQEKFLAKQLNDNMKHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+  +  S   + L  ++   TL+RG+    +     ++    +     
Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DG+  A V    
Sbjct: 429 LNLHFKDGEVTATVTEVK 446


>gi|153208843|ref|ZP_01947067.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154707196|ref|YP_001424680.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii Dugway
           5J108-111]
 gi|165921446|ref|ZP_02219634.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 334]
 gi|212212372|ref|YP_002303308.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii
           CbuG_Q212]
 gi|212218658|ref|YP_002305445.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii
           CbuK_Q154]
 gi|120575694|gb|EAX32318.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154356482|gb|ABS77944.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii Dugway
           5J108-111]
 gi|165916761|gb|EDR35365.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 334]
 gi|212010782|gb|ACJ18163.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii
           CbuG_Q212]
 gi|212012920|gb|ACJ20300.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii
           CbuK_Q154]
          Length = 414

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 217/381 (56%), Gaps = 10/381 (2%)

Query: 1   MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+   ++ SL+     Y+VS+L+   + ++E     + + GEIS      +SGH YFSLK
Sbjct: 1   MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  +++    ++    ++ F PE G   LV  +I+ +     +Q+I+  +  +GSG L  
Sbjct: 60  DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
           A EK K++L +EGLF+ ++K PIP  P  I VITS +GA IRD+L+ ++ RFP + VI++
Sbjct: 120 AFEKLKQRLEKEGLFAPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISVIVY 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQGD+  ++IA+AI + ++ KE       D++++ RGGGS+EDLW FN+E + RAI 
Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           +  IP+++ +GHE D+T+AD+ AD RA TP+ AAEM  P ++     + + + RL + I 
Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             +++    L  L+  L   DQ L   R +++ L   L   ++    R+ ++       +
Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRQQNLAAKAQAL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQ 378
           ++   +  +++    +  + Q
Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 1/143 (0%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  +  NR+  L+     ++ ++  +       + ++  L    ++   R+     
Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            I+ L  R+   + +       +++   + LQ+ +   TLKRGY  +   N   + + + 
Sbjct: 323 QIEALQHRLMMAMDYDFNRRQQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381

Query: 479 LATKTRILINFFDGQANAIVINK 501
           L    +I     +GQ +  V   
Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404


>gi|298675638|ref|YP_003727388.1| exodeoxyribonuclease VII large subunit [Methanohalobium evestigatum
           Z-7303]
 gi|298288626|gb|ADI74592.1| exodeoxyribonuclease VII, large subunit [Methanohalobium
           evestigatum Z-7303]
          Length = 406

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 213/360 (59%), Gaps = 14/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+VSEL+ H+K ++++ LS   + VRGEIS ++  H+SGH YF+LKD +++I  + ++ 
Sbjct: 2   IYTVSELNTHIKQLLKNELSINQIWVRGEISNFK-KHTSGHYYFTLKDRNNQISCVSFRS 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           T   I+F PE+ ++ L+ G I  +    +YQ+ +  + P G G L  A E+ K +L  EG
Sbjct: 61  TNRNIKFEPEDSMQVLIFGSIDVYKVRGQYQLNVFDIRPDGIGELYKAYEQLKNQLDSEG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
            F D +K  IP  P  I V TS  GA I DI+  +  RFP+ ++I P  VQG++    I 
Sbjct: 121 FFKDTNKKSIPEFPHRIGVATSTKGAAIHDIMNVVKRRFPVDILISPTIVQGEQSASSIV 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           ++I +LN           D+IIL RGGGS+EDLW FN+E++ RAI +S  P+ISA+GHET
Sbjct: 181 DSIEKLNQ-------CSVDVIILGRGGGSLEDLWSFNEEIVARAIYSSQKPVISAVGHET 233

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ AD+RAPTP+ AAE+ VP    +   + NL +R+ N I   I  K   L  + 
Sbjct: 234 DYTIADFTADMRAPTPSAAAELVVPDYMDIIRRINNLSSRMENAITNKITEKSTQLYYVQ 293

Query: 312 KALPNSDQT---LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           K + + ++    +  ++ ++D L   +E++++ ++  K        N +++   +  +++
Sbjct: 294 KRM-HPERLYDNIRQNQQQVDELLSRMEYSIKNVLKSKKSSLQIHANHLQAVSPLKTLER 352



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I      +E  +   +     +       +H   E+  + I      + +L++R+E+ 
Sbjct: 265 RRINNLSSRMENAITNKITEKSTQLYYVQKRMHP--ERLYDNIRQNQQQVDELLSRMEYS 322

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489
           + + +KS  +S+ I    LQ+ +   TL+RGY+   D  N + I    N++    + I  
Sbjct: 323 IKNVLKSKKSSLQIHANHLQAVSPLKTLERGYSITTDSKNGSVIKSIDNVSNGDSLDIIV 382

Query: 490 FDGQANAIVINKAPPK 505
            DG     V N +   
Sbjct: 383 KDGIIKCSVKNTSKKS 398


>gi|95928785|ref|ZP_01311531.1| exodeoxyribonuclease VII, large subunit [Desulfuromonas acetoxidans
           DSM 684]
 gi|95135130|gb|EAT16783.1| exodeoxyribonuclease VII, large subunit [Desulfuromonas acetoxidans
           DSM 684]
          Length = 405

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 134/357 (37%), Positives = 202/357 (56%), Gaps = 8/357 (2%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           P  ++ +L+  ++  +E N   V VRGEIS       SGH YF+LKD   +I +++++  
Sbjct: 7   PILTIGQLNELIRETLEDNFVQVRVRGEISNL-SRPGSGHWYFTLKDEKGQIRSVMFRSA 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ F PE G + +  G+I+ +      Q+I +++   G G L  A E+ KKKL  EGL
Sbjct: 66  NRQVPFQPEHGQQVICNGRISLYEARGDIQLICDTMEAEGYGGLQLAFEQLKKKLDAEGL 125

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+ +HK  +P  P+ I VITS TGA I DIL  +  R   LRV++ PV VQGD  P++I 
Sbjct: 126 FALEHKRTLPPHPQCIGVITSATGAAIHDILNILQRRAHGLRVVLRPVLVQGDLAPQQIV 185

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ +LN         + + II+ RGGGS+EDL  FN E + +AI  S+ PIISA+GHET
Sbjct: 186 MALKELN------EYGQCEAIIVGRGGGSLEDLQAFNSEEVAQAIFASACPIISAVGHET 239

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ ADLRAPTP+ AAE+ V  ++ L+  L  L  RLN  + R +  K   L +L 
Sbjct: 240 DFTIADFVADLRAPTPSAAAELVVKNRQELEQHLDQLSIRLNTAMNRQLTLKQQHLEALS 299

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           K L +    L   + R D L R L+  +   + R       +  R+ +   ++ +Q+
Sbjct: 300 KRLRSPQARLQQQQQRCDDLARRLQQAIAHDLERCQHQLQQLAGRLHALSPLNTMQR 356



 Score =  114 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 2/142 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           KNRQ + +    +   +   +      K++ +  L       + R+         L  R+
Sbjct: 264 KNRQELEQHLDQLSIRLNTAMNRQLTLKQQHLEALSKRLRSPQARLQQQQQRCDDLARRL 323

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN--NFITQKRNLATKTRI 485
           +  ++H ++ C   +      L + +  NT++RG++ +   +     +     L    R+
Sbjct: 324 QQAIAHDLERCQHQLQQLAGRLHALSPLNTMQRGFSVVATEDTPPALVRHADQLHVGQRV 383

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            + F  G A A +   +P    
Sbjct: 384 SLQFHQGSAKATIDAVSPVDPS 405


>gi|306830870|ref|ZP_07464032.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304426893|gb|EFM30003.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 442

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 147/492 (29%), Positives = 227/492 (46%), Gaps = 62/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W GT
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLADY AD RA TPT AAE+A PV +    S I             +  +       L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRVIKQKQERLDKL 296

Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL  +L + ++    +  +    +  R+ +  L  +I++
Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +   Q+ +   +                                            
Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  N   I+   ++    ++ + 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428

Query: 489 FFDGQANAIVIN 500
             DGQ    V +
Sbjct: 429 LKDGQLEVEVKD 440


>gi|260101431|ref|ZP_05751668.1| exodeoxyribonuclease VII [Lactobacillus helveticus DSM 20075]
 gi|260084771|gb|EEW68891.1| exodeoxyribonuclease VII [Lactobacillus helveticus DSM 20075]
 gi|328465629|gb|EGF36852.1| exodeoxyribonuclease VII large subunit [Lactobacillus helveticus
           MTCC 5463]
          Length = 447

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 134/497 (26%), Positives = 240/497 (48%), Gaps = 58/497 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            D+   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD  
Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L++RL   +   I  K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +       ++D L + L+++++  +    +++  +  R+ S     
Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I   +Q      + +   +K +                                     
Sbjct: 356 QIAGMKQQEKFLAKQLNDNMKHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+  +  S   + L  ++   TL+RG+    +     ++    +     
Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428

Query: 485 ILINFFDGQANAIVINK 501
           + ++F DG+  A V   
Sbjct: 429 LNLHFKDGEVTATVTEV 445


>gi|117924359|ref|YP_864976.1| exodeoxyribonuclease VII large subunit [Magnetococcus sp. MC-1]
 gi|117608115|gb|ABK43570.1| Exodeoxyribonuclease VII large subunit [Magnetococcus sp. MC-1]
          Length = 448

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 141/501 (28%), Positives = 239/501 (47%), Gaps = 55/501 (10%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
           +S          SV EL+  ++ ++E   + V V+GE+S      +SGH YF+L D  ++
Sbjct: 2   YSNDTPSWKKVLSVFELNSAIRDLLEEGFAFVRVQGEVSRISA-PASGHLYFNLVDEQAQ 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I A++W+ +  ++   P EG E L+ G+I+ F    +YQII+++L P G+G+    L + 
Sbjct: 61  IRAVVWRASKARLSHHPREGEEVLITGRISVFAPRGEYQIIVDALTPKGAGSEREKLLQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
            ++L +EGLF  Q K P+P++P +I V TS +GA ++DI++ +  R P   +++ P +VQ
Sbjct: 121 HRQLEQEGLFDPQRKRPLPYLPHVIGVATSESGAALQDIIRVLESRNPDFHLLLAPCQVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G E P+ I  A+  LN         R  +II  RGGGS EDL  FN E +VRAIA S+IP
Sbjct: 181 GSEAPQAIVQALRALNA------DGRAQVIICGRGGGSAEDLACFNSEQVVRAIAASAIP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SA+GHE D TLAD AADLRA TP+ AAE+ +P +  L      L  RL   + + +  
Sbjct: 235 VVSAVGHEVDTTLADLAADLRAATPSQAAELIMPERLALAQETTALALRLQRAMHQQLHN 294

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +   +    + L +  + L  +R R D L   L+  LE ++ ++ +      N +     
Sbjct: 295 QQRRVQQASQRLLHPSRRLDQARLRCDELQMRLQGVLERLLPQQQQRLRRATNTLHHWAT 354

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
             ++ + RQ + ++Q      +                                   +++
Sbjct: 355 GPSLPRQRQQLKQQQHRAHTAMLY--------------------------------QLRQ 382

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             +R+       I               + +    L+RGY  ++D   + +   +    +
Sbjct: 383 WQSRLHSAQLQLI---------------ALSPLQVLERGYAIVRDNQGSVLRDAQAAPLE 427

Query: 483 TRILINFFDGQANAIVINKAP 503
           + + I    G   A V  + P
Sbjct: 428 STLTITLAKGTLAARVTQRKP 448


>gi|161830515|ref|YP_001597093.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 331]
 gi|161762382|gb|ABX78024.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 331]
          Length = 414

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 217/381 (56%), Gaps = 10/381 (2%)

Query: 1   MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M+   ++ SL+     Y+VS+L+   + ++E     + + GEIS      +SGH YFSLK
Sbjct: 1   MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  +++    ++    ++ F PE G   LV  +I+ +     +Q+I+  +  +GSG L  
Sbjct: 60  DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
           A EK K++L +EGLF  ++K PIP  P  I VITS +GA IRD+L+ ++ RFP + +I++
Sbjct: 120 AFEKLKQRLEKEGLFVPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISIIVY 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQGD+  ++IA+AI + ++ KE       D++++ RGGGS+EDLW FN+E + RAI 
Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           +  IP+++ +GHE D+T+AD+ AD RA TP+ AAEM  P ++     + + + RL + I 
Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             +++    L  L+  L   DQ L   R +++ L   L   ++    R++++       +
Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRHQNLAAKAQAL 353

Query: 358 KSDFLIHNIQKNRQHILEKQQ 378
           ++   +  +++    +  + Q
Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 1/143 (0%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  +  NR+  L+     ++ ++  +       + ++  L    ++   R+     
Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            I+ L  R+   + +     H +++   + LQ+ +   TLKRGY  +   N   + + + 
Sbjct: 323 QIEALQHRLMMAMDYDFNRRHQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381

Query: 479 LATKTRILINFFDGQANAIVINK 501
           L    +I     +GQ +  V   
Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404


>gi|184155738|ref|YP_001844078.1| exodeoxyribonuclease VII large subunit [Lactobacillus fermentum IFO
           3956]
 gi|183227082|dbj|BAG27598.1| exodeoxyribonuclease VII large subunit [Lactobacillus fermentum IFO
           3956]
          Length = 482

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%)

Query: 15  YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67
            +V++L+ ++K   +++     +V V G+++ +R   +  H YFSLKD+ +    ++  +
Sbjct: 8   LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    K++F PE G+  ++ G+++ +     YQ+  E++  +G GTL    E+  KKL
Sbjct: 66  MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  +   PK IAV+TS   AV  DI+  +  R   ++++ +P +VQG++ 
Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA  I +++           D +I+ARGGGS+EDLW FN+E++ RAI  +++P+IS+
Sbjct: 185 AGEIAAQIKRVSDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303
           IGHETD T+ D  AD+R  TPT AAE           + +  E  L     +       +
Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKRQLANLKQ 298

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                +    L   ++       ++D L   L+    +++  + R    +   ++     
Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + K +  +   QQ +   ++ H                   E+ + R+  L    +  
Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +     +  +     +    + L + +    L RG+  +   +   +     LA   
Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459

Query: 484 RILINFFDGQANAIVINKA 502
              + F  GQA   V    
Sbjct: 460 EATVKFEQGQAQVTVTKIE 478


>gi|161507736|ref|YP_001577697.1| exodeoxyribonuclease VII large subunit [Lactobacillus helveticus
           DPC 4571]
 gi|172048324|sp|A8YVW9|EX7L_LACH4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|160348725|gb|ABX27399.1| Exodeoxyribonuclease [Lactobacillus helveticus DPC 4571]
          Length = 447

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 134/498 (26%), Positives = 239/498 (47%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            D+   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   E++ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD  
Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L++RL   +   I  K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN +     +    +       ++D L + L+++++  +    +++  +  R+ S     
Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I    Q      + +   +K +                                     
Sbjct: 356 QIAGMEQQEKFLAKQLNDNMKHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+  +  S   + L  ++   TL+RG+    +     ++    +     
Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428

Query: 485 ILINFFDGQANAIVINKA 502
           + ++F DG+  A V    
Sbjct: 429 LNLHFKDGEVTATVTEVK 446


>gi|73662540|ref|YP_301321.1| exodeoxyribonuclease VII large subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|82592841|sp|Q49XW8|EX7L_STAS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|72495055|dbj|BAE18376.1| exodeoxyribonuclease large subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 445

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 152/495 (30%), Positives = 239/495 (48%), Gaps = 61/495 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ ++K+  + +  L  V ++GE+S ++  HSSGH YF++KD +S I A+++
Sbjct: 2   SEYLSVTSLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG  +KI+F P+EG E L+  +++ +     YQI +  +   G G L   LE+ KKKL +
Sbjct: 61  KGNASKIDFEPKEGDEVLLEARVSVYERRGNYQIYVNKMHMDGIGNLYQKLEQLKKKLTK 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
           EG F   HK  IP  P+ IAV+T+ TGA IRDI   I+ R+PL   +     VQG++   
Sbjct: 121 EGFFDQNHKKVIPKFPQKIAVLTAGTGAAIRDIHTTINSRYPLAEQVQINTLVQGEQAKS 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I Q + L         D II+ RGGGSIEDLW+FN+E +V+AI N   PIISA+G
Sbjct: 181 DIIEKINQADAL-------NVDTIIIGRGGGSIEDLWNFNEEDVVKAIYNCQTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL+D+ AD+RA TPT AA MA P +  L+  L      L   I + ++ K   L 
Sbjct: 234 HETDFTLSDFVADVRAATPTQAAVMATPDQYELRQYLQQANLSLTRFIKQYMQQKRKHLE 293

Query: 309 SLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            +                  + D L ++L+ +L + I  + +    + N          I
Sbjct: 294 HVASYYKFQTPSLLYDQQIQKRDDLEKQLKLSLNLKIKNQQQQLQLLFNNFNLKTFKQRI 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              R  +   Q+ +E                                         L   
Sbjct: 354 --KRDQLTNNQKRVE-----------------------------------------LSKV 370

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +  +L ++      +++     L + +  NT+ RGYT + + ++  IT  ++LA    I+
Sbjct: 371 MHNLLDNQ----KNNLARKLENLNNLSPTNTMLRGYTIV-NKDDKVITSTKDLAENDNIV 425

Query: 487 INFFDGQANAIVINK 501
           +   DG  +A V   
Sbjct: 426 LTMKDGVVDAQVKKV 440


>gi|227515670|ref|ZP_03945719.1| exodeoxyribonuclease VII [Lactobacillus fermentum ATCC 14931]
 gi|227085973|gb|EEI21285.1| exodeoxyribonuclease VII [Lactobacillus fermentum ATCC 14931]
          Length = 482

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%)

Query: 15  YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67
            +V++L+ ++K   +++     +V V G+++ +R   +  H YFSLKD+ +    ++  +
Sbjct: 8   LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    K++F PE G+  ++ G+++ +     YQ+  E++  +G GTL    E+  KKL
Sbjct: 66  MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  +   PK IAV+TS   AV  DI+  +  R   ++++ +P +VQG++ 
Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA  I +++           D +I+ARGGGS+EDLW FN+E++ RAI  +++P+IS+
Sbjct: 185 AGEIAAQIKRVSDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303
           IGHETD T+ D  AD+R  TPT AAE           + +  E  L     +       +
Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKSQLANLKQ 298

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                +    L   ++       ++D L   L+    +++  + R    +   ++     
Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + K +  +   QQ +   ++ H                   E+ + R+  L    +  
Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +     +  +     +    + L + +    L RG+  +   +   +     LA   
Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459

Query: 484 RILINFFDGQANAIVINKA 502
              + F  GQA   V    
Sbjct: 460 EATVKFEQGQAQVTVTKIE 478


>gi|260663545|ref|ZP_05864435.1| exodeoxyribonuclease VII, large subunit [Lactobacillus fermentum
           28-3-CHN]
 gi|260552086|gb|EEX25139.1| exodeoxyribonuclease VII, large subunit [Lactobacillus fermentum
           28-3-CHN]
          Length = 482

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%)

Query: 15  YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67
            +V++L+ ++K   +++     +V V G+++ +R   +  H YFSLKD+ +    ++  +
Sbjct: 8   LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    K++F PE G+  ++ G+++ +     YQ+  E++  +G GTL    E+  KKL
Sbjct: 66  MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  +   PK IAV+TS   AV  DI+  +  R   ++++ +P +VQG++ 
Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA  I +++           D +I+ARGGGS+EDLW FN+E++ RAI  +++P+IS+
Sbjct: 185 AGEIAAQIKRISDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303
           IGHETD T+ D  AD+R  TPT AAE           + +  E  L     +       +
Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKSQLANLKQ 298

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                +    L   ++       ++D L   L+    +++  + R    +   ++     
Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + K +  +   QQ +   ++ H                   E+ + R+  L    +  
Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +     +  +     +    + L + +    L RG+  +   +   +     LA   
Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459

Query: 484 RILINFFDGQANAIVINKA 502
              + F  GQA   V    
Sbjct: 460 EATVKFEQGQAQVTVTKIE 478


>gi|323702774|ref|ZP_08114434.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532291|gb|EGB22170.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 401

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 134/360 (37%), Positives = 213/360 (59%), Gaps = 12/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SVSEL+ ++K  +ES+  L+++ V+GEIS  + IHSSGH YF+LKD  S + A++++ 
Sbjct: 3   ILSVSELTKYIKDKIESDYILANIWVKGEISNLK-IHSSGHIYFTLKDQESCLKAVMFRS 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F PE G+  +V G ++ +     YQ+  E + P G G L  A E+ K+KL   G
Sbjct: 62  RGRRLLFRPEYGMHVIVRGYVSVYERDGTYQLYAEEMEPDGIGALYIAFEQMKQKLAARG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
           LF +  K PIP IP+++ +ITSPTGA ++D+L  +  R+  +++I+ PV VQG+  P EI
Sbjct: 122 LFDEGRKRPIPRIPRVVGIITSPTGAAVQDMLNIMRRRWSGVQIILAPVLVQGESAPGEI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI ++N           D++I+ RGGGS+E+LW FN E +  AIANS+IP+ISA+GHE
Sbjct: 182 ARAIGRMNQ------VGGIDVLIVGRGGGSLEELWAFNTEEVAMAIANSAIPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD  ADLRAPTP+ AAE+ VP +  +Q  L +L+ RL   +   ++     L + 
Sbjct: 236 TDYTIADMVADLRAPTPSAAAELVVPDQREMQRYLRSLQQRLVKAVHNNLERNRQRLKAC 295

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               +L          +  LDRL   L+    +++  K     ++  +++    +  + +
Sbjct: 296 TNSPSLQRPFLITGNRQQTLDRLTTALQRAGRLMLADKSAALANLAGKLQVLSPLATLAR 355



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 2/140 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ ++++   QQ + + V  H       ++ K        ++           + +L T 
Sbjct: 264 REMQRYLRSLQQRLVKAV--HNNLERNRQRLKACTNSPSLQRPFLITGNRQQTLDRLTTA 321

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++      +     +++     LQ  +   TL RGY+     +   +T    +     + 
Sbjct: 322 LQRAGRLMLADKSAALANLAGKLQVLSPLATLARGYSICTAADGKVLTDSGIINIGDHVH 381

Query: 487 INFFDGQANAIVINKAPPKE 506
           +    G  N  V++K+   E
Sbjct: 382 VILDKGSINCTVVSKSNAAE 401


>gi|172056942|ref|YP_001813402.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sibiricum
           255-15]
 gi|259646290|sp|B1YLQ2|EX7L_EXIS2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|171989463|gb|ACB60385.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sibiricum
           255-15]
          Length = 447

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 133/491 (27%), Positives = 221/491 (45%), Gaps = 62/491 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
                VSEL  ++K  +E++  L  V V GE+S ++  HSSGH YF+LKD  SR+ A+++
Sbjct: 2   TNPLQVSELVQYVKRELENDSLLQQVQVVGEVSNFK-RHSSGHLYFTLKDEQSRMKAVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
               ++++    +G   ++  +I+ +  S + Q+ +E ++  G G L  A  + K+ +  
Sbjct: 61  ARDASRVKTDIRDGARVIITARISVYVASGEMQLYVERMMEDGVGALYEAYVQLKEDVEA 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF-PVKVQGDECPK 188
            G F  + K P+P  P+ I ++TSP GA + DI   +  R+P   I+F PV VQG E   
Sbjct: 121 RGWFEAEQKLPLPAFPQKIGIVTSPKGAALHDIATTLRRRYPQAAIVFAPVLVQGKEAAP 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I  AI  +N           D++I+ RGGGSIE+LW FN+  +V AI  S IPI+SA+G
Sbjct: 181 QIVRAIEWMN------EHQACDVMIIGRGGGSIEELWAFNEMPVVTAIHQSRIPIVSAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ AD+RA TPT AAE+  P    L   L  L  RL     + I  + + + 
Sbjct: 235 HETDFTIADFVADVRAATPTAAAELVTPEAAELAKRLNELNRRLTRHYAQYITERKDQVQ 294

Query: 309 S--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                  L +    L   + RLDR    L    + ++  K +     +NR     +   +
Sbjct: 295 RLATSYGLKSPRVLLGLKQERLDRAEMGLNRIGKQVLQSKQQALTDQVNRFARIAMQERL 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  + ++  ++ +E+I                                           
Sbjct: 355 AEQGRQLVRTRKQLERIHTV---------------------------------------- 374

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
                   +++    +      L S +    + RGYT ++  +   +     L+      
Sbjct: 375 --------LRTKQDRLHQMIARLDSVSPTQVMLRGYTYVE-QDGRLVRSVTELS-DQTFR 424

Query: 487 INFFDGQANAI 497
           + F DG   A 
Sbjct: 425 VQFHDGSILAK 435


>gi|224373381|ref|YP_002607753.1| exodeoxyribonuclease VII large subunit [Nautilia profundicola AmH]
 gi|254783704|sp|B9L5W5|EX7L_NAUPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|223589526|gb|ACM93262.1| exodeoxyribonuclease VII, large subunit [Nautilia profundicola AmH]
          Length = 445

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 139/491 (28%), Positives = 225/491 (45%), Gaps = 54/491 (10%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV++L+  +K IVES+   V V GEIS     HSSGH YF+LKD +S I+  +WK  L
Sbjct: 3   PISVTQLNNQIKSIVESHFEIVLVEGEISKVV-YHSSGHLYFTLKDENSSINCAMWKSNL 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +++F  +EG +  V G ++ +    +Y+II +S+ PSG G L  A E+ K++L + G F
Sbjct: 62  TRMKFRLKEGEKVYVYGALSVYVPRGEYKIIAQSIEPSGVGALQKAFEQLKEELSKLGYF 121

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            +  K  IP  P+ IA++TS TGA ++D+L+    R+ L  + +F   VQGD   ++IA 
Sbjct: 122 DEARKKSIPRFPRRIAIVTSATGAALQDMLRVAGKRWQLTEIYLFNALVQGDGAAEDIAM 181

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   +           D+II+ RGGGS EDLW FN+ ++  A+ N+S PIISA+GHE D
Sbjct: 182 KIKLADEFVFEDGS-GFDLIIIGRGGGSKEDLWPFNERVVADAVYNASTPIISAVGHEID 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + ++D+ AD+RA TP+ A E+A+P K  +   L  ++      I  LI+ K   L  + +
Sbjct: 241 YLISDFVADVRAATPSNAMEIALPDKNEILLMLDEMKNAFVYKISHLIQKKERELIHIRE 300

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L   +  + L       + L +   H+    I +K +  N + N + S   +       
Sbjct: 301 LLNASSPVKKLDMKLQECELLLKRFNHSYINQIQKKEKELNELKNILFSLSPVI------ 354

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
                                                    +I      I+ L +  +  
Sbjct: 355 -----------------------------------------KINSFEKEIELLKSTFKNK 373

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
            +  I S    +       ++   K   K+G+  I   N   I   + L       ++  
Sbjct: 374 TAQIISSKEKELINLKSAYETLNPKKREKKGFAEIT-KNGKRI-DLKELKIGDIFDVSNA 431

Query: 491 DGQANAIVINK 501
           D    +  + K
Sbjct: 432 DVLIKSKALEK 442


>gi|110005166|emb|CAK99493.1| putative exodeoxyribonuclease vII large subunit protein
           [Spiroplasma citri]
          Length = 430

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 137/504 (27%), Positives = 216/504 (42%), Gaps = 77/504 (15%)

Query: 10  LDHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+VSE++Y+LK I+E   NL ++ ++GEIS     HSSGH YF++KD  ++I AI
Sbjct: 1   MSKNIYTVSEINYYLKTIIEQEPNLINISLQGEISNITN-HSSGHVYFTIKDEKAQIRAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      ++F  +EG++ +  G I  +     Y + + +L   G GTL    E  K++L
Sbjct: 60  MFAFNAKNLQFKLKEGLKIIATGSIKVYEPQGTYSLQVVALSLQGVGTLFLKYEALKQEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            ++G F    K PIP  P  I VIT+PTGA IRDI+  I  RFP   + +FP  VQG E 
Sbjct: 120 SKKGWFGQSLKKPIPRFPNNIGVITAPTGAAIRDIISTIHRRFPQANIYLFPSLVQGSEA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   I    +       P  D +I+ RGGGSIEDLW FN+  +V AI  ++IP+ISA
Sbjct: 180 KHDIRAKIKAAQSFT-----PHLDTLIVGRGGGSIEDLWAFNELEVVEAIYQTTIPVISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+TLAD+ +DLRAPTPT AAE+A                                
Sbjct: 235 VGHEIDFTLADFVSDLRAPTPTAAAELAT------------------------------- 263

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                   P+  + ++  + +   L       ++  I +     + + N           
Sbjct: 264 --------PDQKELINYLQQQRRNLINF----VKGRIDKIGDKLSELKNSYVLTRPQALY 311

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +         +    + +                                  I+     
Sbjct: 312 TQYEHSYQLLLKQFNVLQETFF-------------------------IANKNMIQNYYQT 346

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  +I +     +     L   +   TL RGY+   + N N I+   ++     I+
Sbjct: 347 LVRTIKQQILALEHEKNNLVSKLDLLSPLKTLTRGYSITYNDNKNVISTTHDIKNNDIII 406

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
               DG  ++IV       E+  K
Sbjct: 407 TRVQDGFIHSIVQAINKDGEKNDK 430


>gi|291279480|ref|YP_003496315.1| exodeoxyribonuclease VII large subunit [Deferribacter desulfuricans
           SSM1]
 gi|290754182|dbj|BAI80559.1| exodeoxyribonuclease VII, large subunit [Deferribacter
           desulfuricans SSM1]
          Length = 446

 Score =  310 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 137/491 (27%), Positives = 228/491 (46%), Gaps = 55/491 (11%)

Query: 15  YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +VSEL+  +K+I+E++    V V GEIS Y  + S GH YF+LKD++++I  + +K   
Sbjct: 4   LTVSELTNKIKNILENSFTGPVSVVGEISNY-SVSSLGHCYFTLKDDNAQIKCVFFKRYR 62

Query: 74  NKIE-FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             +  + P+ G + +V G +T +     YQII++ +     G      E+ K+KL +EG 
Sbjct: 63  ILLRDYEPKNGDKVVVTGDLTVYEKDGLYQIIVKKIEYDSVGDFYKKFEETKRKLEKEGF 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F    K  IP + K +A+ITSPTGA I+D ++ I      + V I+P  VQGD+    I 
Sbjct: 123 FDSDLKKEIPKLVKRVAIITSPTGAAIKDFIRTIKKNSVNMIVDIWPAPVQGDDAIPIII 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           + I ++N   +       DI+IL RGGGS+EDL  FNDE + R++ +S IP ISAIGHE 
Sbjct: 183 DQITKINNFVDY-----YDILILMRGGGSLEDLSIFNDEFLARSLFHSKIPTISAIGHER 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ D+ ADLR  TPT AAE        ++  + NL   L   +   +   +  L++L 
Sbjct: 238 DFTICDFVADLRVATPTAAAEKVSEYYVTIEEKIDNLTKHLIKEMEYKLMNNLQYLDTLD 297

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             +   +      R ++  +       LE                     L  ++ +N +
Sbjct: 298 ARI-QKNSPYQKVRTKIQEITLMERKILEN--------------------LKSSLFQNEK 336

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            ++E  + IE+                        E    ++   +  + + I  ++ IL
Sbjct: 337 IVVEYLRRIER------------------------ENPMYKLENFNIKVDQFIKNMKTIL 372

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K++  +  V      L     +N L++GY  +   + N +    ++  +  + I   D
Sbjct: 373 LGKLEVLNNRVDSMMNSLNLTNPENILEKGYAIVL-QDKNPVVSVNSVHLEDELEIKMKD 431

Query: 492 GQANAIVINKA 502
           G  N  V  K 
Sbjct: 432 GYINIFVTGKK 442


>gi|293400616|ref|ZP_06644761.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305642|gb|EFE46886.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 442

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 59/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  P  SV +L ++LK  ++   NL  + ++GEIS +   H SGH YF+LKD  ++I  +
Sbjct: 1   MKQPLLSVYDLVHYLKQTLDHDPNLQTLLIQGEISNFTN-HRSGHWYFTLKDKKAKISCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++    ++   L +EG++ +V  +++ +      Q+ +  +   G G L   LE  KK++
Sbjct: 60  MFSSYASRCSILLKEGMKVIVRAEVSMYEPQGSLQLYVTHVQVDGLGDLYLKLEAVKKQM 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF+ + K  +P  P  IAVI++ +GA ++D+L  I+ R+PL  V ++P  VQG   
Sbjct: 120 AKEGLFALERKKALPLYPMDIAVISAKSGAAVQDVLTTIARRWPLANVHVYPSLVQGINA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             ++   + + + ++        D+I+L RGGG+IEDLW FN+E + R I++    I++ 
Sbjct: 180 ADDLIRNLKKADEMEH-------DVILLVRGGGAIEDLWCFNEERVARCISSMKSVIVTG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL DY +D RAPTPT AAE+  P +E +   L++L++R+  I+   ++ +   
Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPQREEILMQLMHLKSRMKQIMNHRLQEEK-- 290

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                       ++L   RY  D L    E  +++ +  +                   +
Sbjct: 291 ---------AVLESLKQHRYMSDPLSYIRESQMKLAMQAREMGMIE-----------QRL 330

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            K+R  + E    +                           Q++           K+  +
Sbjct: 331 LKHRHTVQEYANRLA-------------------------HQSQQIAQKKQAEKAKVWIQ 365

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   L    +   T++     +L +++  N LKRGY   +  +   I    ++  ++ + 
Sbjct: 366 LAHALQEYQRKQQTTLYKQISLLDAYSPLNVLKRGYAIAETKD-TLIKSIDDVQEESLMR 424

Query: 487 INFFDGQANAIVINKA 502
           I   DG  +A V  K 
Sbjct: 425 IRLVDGFLHACVKKKE 440


>gi|322372791|ref|ZP_08047327.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C150]
 gi|321277833|gb|EFX54902.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C150]
          Length = 446

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 146/494 (29%), Positives = 234/494 (47%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ +LK   + +  L  V + G++S +R   S  H YFSLKD  + I A IW G 
Sbjct: 5   LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ +KKL  +G 
Sbjct: 63  FKKLGFDLEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGVGALALQFEQLRKKLTAQGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K + V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDERHKQALPNFVKRVGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V++I  S +P+IS++GHET
Sbjct: 183 ENIQRANQR------DDLDLLIVGRGGGSIEDLWAFNEEVVVQSIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  K      +   + R     +R I+Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKADTLVWIRERQNRAYQACLRRIQYNQERLAKL 296

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +++     ++       +LD+L   LE  ++    RK +    +  R++   L+ +++ 
Sbjct: 297 SQSIVFRQPERLYDGYLQKLDQLTTRLETLIKQEFERKQKETALLSQRLQGLNLLASVEN 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +      Q+                                                + 
Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
               + +      +      L S      + RGY  + + ++  +T  +++    ++ I 
Sbjct: 370 TTTKNTLNGYRVRLEKAQEALLSLDTSRIVARGYAIV-NKDDKPLTTIKDITEGDQLTIQ 428

Query: 489 FFDGQANAIVINKA 502
             DG+    V N  
Sbjct: 429 MRDGELEVEVKNVN 442


>gi|288904838|ref|YP_003430060.1| exonuclease VII, large subunit [Streptococcus gallolyticus UCN34]
 gi|288731564|emb|CBI13119.1| putative exonuclease VII, large subunit [Streptococcus gallolyticus
           UCN34]
          Length = 442

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 148/492 (30%), Positives = 228/492 (46%), Gaps = 62/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W GT
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G GTL    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGTLAIQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLADY AD RA TPT AAE+A PV +    S I             +  +       L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIVSWIAERQNRAYQASLRVIKQKQERLDKL 296

Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL  +L + ++    +  +    +  R+ +  L  +I++
Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +   Q+ +   +                                            
Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  N   I+   ++    ++ + 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428

Query: 489 FFDGQANAIVIN 500
             DGQ    V +
Sbjct: 429 LKDGQLEVEVKD 440


>gi|228476892|ref|ZP_04061537.1| exodeoxyribonuclease VII, large subunit [Streptococcus salivarius
           SK126]
 gi|228251466|gb|EEK10611.1| exodeoxyribonuclease VII, large subunit [Streptococcus salivarius
           SK126]
          Length = 442

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 153/494 (30%), Positives = 231/494 (46%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ +LK   + +  L  V + G++S +R   S  H YFSLKD  + I A IW G 
Sbjct: 5   LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ +KKL  EG 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQALPNFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V++I  S +PIIS++GHET
Sbjct: 183 ENIQKANQR------DDLDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  K      +   + R     +R I+Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKADTLVWIRERQNRAYQACLRRIQYNQERLAKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL   LE  +     RK +    +  R++   L+ ++Q 
Sbjct: 297 SQSVVFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKEAELLRQRLQGLNLLTSVQN 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +      Q+                                                + 
Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
               + I      +      L S      + RGY  ++  ++  +T  +N+    ++ + 
Sbjct: 370 TTTKNTINGKRVRLEKAQDALLSLDTSRIVARGYAIVK-KDDKPLTSTKNITEGDQLTVQ 428

Query: 489 FFDGQANAIVINKA 502
             DG+    V N  
Sbjct: 429 MRDGELEVEVKNVN 442


>gi|325977770|ref|YP_004287486.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325177698|emb|CBZ47742.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 442

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 146/492 (29%), Positives = 227/492 (46%), Gaps = 62/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W GT
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLADY AD RA TPT AAE+A PV +    S I             +  +       L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRVIKQKQERLDKL 296

Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL  +L + ++    +  +    +  R+ +  L  +I++
Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +   ++ +   +                                            
Sbjct: 357 YQERLEAFRRLLISNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  N   I+   ++    ++ + 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428

Query: 489 FFDGQANAIVIN 500
             DGQ    V +
Sbjct: 429 LKDGQLEVEVKD 440


>gi|89895099|ref|YP_518586.1| hypothetical protein DSY2353 [Desulfitobacterium hafniense Y51]
 gi|122482497|sp|Q24V00|EX7L_DESHY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|89334547|dbj|BAE84142.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 406

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 139/364 (38%), Positives = 210/364 (57%), Gaps = 12/364 (3%)

Query: 11  DHP-EYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           + P  ++V+EL+  +   +    +  +  V GEIS Y+    SGH YF+LKD  S +  +
Sbjct: 3   NVPKIWTVAELTREIGQTLNDNPDFVNCWVSGEISNYKNHRPSGHWYFTLKDEQSSMKGV 62

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P++G++ LV G I  +      Q+  E + PSG G L  A E+ K++L
Sbjct: 63  MFRSRAERVRFTPQDGMKVLVRGSIRIYERDGTIQLYAEEMQPSGVGALYLAFEQLKERL 122

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+ + K  IP  P+ I ++TSPTGA I+DIL+ +  R P +  I+ P  VQG+  
Sbjct: 123 GQEGLFAPERKKAIPRYPRRIGIVTSPTGAAIKDILKVMFRRNPQISWILAPAAVQGELA 182

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           PKE+A AI +LN   +       D+II+ RGGGS+E+LW FN E + RAIA S IP+ISA
Sbjct: 183 PKEVAQAIARLNRHSQ------VDVIIVGRGGGSLEELWAFNTEEVARAIAASGIPVISA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  ADLRAPTP+ AAE+AVPV   L+S L  LEARL++ +   ++ K   
Sbjct: 237 VGHETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQR 296

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+SL     L N    +  +R RLD L   +E  +   +  K      +  ++     + 
Sbjct: 297 LDSLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLA 356

Query: 365 NIQK 368
            + +
Sbjct: 357 ILGR 360



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 5/168 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++  +++       +       E +  +EQ+  +    +  + + K   L 
Sbjct: 239 HETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLD 298

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L           RI      +  L  R+E  ++  +   +  + + T  L   +    L
Sbjct: 299 SLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAIL 358

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            RGY+       N + +  ++    ++ +    G     V+ K+   +
Sbjct: 359 GRGYSLTYGPKGNVLRKSDDINVGQQVQVRLQQGILTCAVLAKSVDSD 406


>gi|88604237|ref|YP_504415.1| exodeoxyribonuclease VII, large subunit [Methanospirillum hungatei
           JF-1]
 gi|88189699|gb|ABD42696.1| Exodeoxyribonuclease VII large subunit [Methanospirillum hungatei
           JF-1]
          Length = 472

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 133/490 (27%), Positives = 224/490 (45%), Gaps = 56/490 (11%)

Query: 17  VSELSYHLKHIVES-NLSHVCVRGEISGYRGIHSSGHAYFSLKD----NHSRIDAIIWKG 71
           VSE+S  +  ++E  +L ++ + GEI+ ++  HSSGH YFSL +      S +   IWK 
Sbjct: 28  VSEVSRMITRLLEDPSLQNIWIIGEITNFK-RHSSGHLYFSLSEQIAGKESVVSCAIWKS 86

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               ++F P++G+E    G I+ +    +Y   I  + PSG+G     +E  ++++  +G
Sbjct: 87  AARYLDFTPDDGMEVRAYGSISHYEPGGRYSFQITQMRPSGAGERALLIEGWRREMAAKG 146

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
            FS   K   P  P  I V+TS TGAVI DI   IS RFP  +I+ P  VQG    +EIA
Sbjct: 147 WFSPDRKRIPPRYPVRIGVVTSSTGAVIHDIRNVISKRFPAEIILSPTMVQGASAHEEIA 206

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI+++  +         D+II+ RGGGS EDL+ FN   +V AI    +P+I+AIGHE 
Sbjct: 207 RAIIRVQDM--------VDVIIVGRGGGSYEDLFAFNHPCVVEAIVTCPVPVIAAIGHEV 258

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD AAD+ A TP+ AAE  VP +E    +LI++  R+   ++  ++     LN + 
Sbjct: 259 DITLADLAADVSASTPSHAAEQCVPDRESELDALIHMRKRMFLQLMNRLESAQEDLNGIR 318

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L +  + L   R R + L                                        
Sbjct: 319 DRLSSP-RLLREVRMRQEALA--------------------------------------- 338

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + ++ +   Q +K   +    E + ++   + L    +  +      + ++  R+   +
Sbjct: 339 DLTDRMERGAQGLKDRAQSRLAELRGRLEGRNPLVY-LRRELPERKNFLAEIKGRLSCAV 397

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             ++++    ++  + IL++   +   + GY  +       I     L     + I   D
Sbjct: 398 QVRLQAERAELTSLSAILKARGPEALFQAGYCMVSSA-GTVIRSCTELTPGKMVTIRLRD 456

Query: 492 GQANAIVINK 501
           G A+A +   
Sbjct: 457 GTADAAITQV 466


>gi|259501556|ref|ZP_05744458.1| exodeoxyribonuclease VII [Lactobacillus iners DSM 13335]
 gi|302191470|ref|ZP_07267724.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners AB-1]
 gi|309809494|ref|ZP_07703352.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN
           2503V10-D]
 gi|312871853|ref|ZP_07731937.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           3008A-a]
 gi|312872421|ref|ZP_07732490.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2062A-h1]
 gi|312874449|ref|ZP_07734479.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2052A-d]
 gi|312874529|ref|ZP_07734554.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2053A-b]
 gi|315653401|ref|ZP_07906323.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners ATCC
           55195]
 gi|325911880|ref|ZP_08174284.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII
           143-D]
 gi|325913428|ref|ZP_08175794.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII
           60-B]
 gi|329919863|ref|ZP_08276801.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN
           1401G]
 gi|259167074|gb|EEW51569.1| exodeoxyribonuclease VII [Lactobacillus iners DSM 13335]
 gi|308170166|gb|EFO72201.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN
           2503V10-D]
 gi|311089920|gb|EFQ48339.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2053A-b]
 gi|311090061|gb|EFQ48475.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2052A-d]
 gi|311092003|gb|EFQ50378.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092575|gb|EFQ50935.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF
           3008A-a]
 gi|315489326|gb|EFU78966.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners ATCC
           55195]
 gi|325476386|gb|EGC79548.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII
           143-D]
 gi|325477197|gb|EGC80343.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII
           60-B]
 gi|328936953|gb|EGG33383.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN
           1401G]
          Length = 452

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 136/498 (27%), Positives = 225/498 (45%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V++L+++L    +++  L  V ++GE+S +R   +S   YFSLKD  S+I+A+
Sbjct: 3   TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F   EG++  V G I  +     YQ  + ++ P+G G L   L + ++KL
Sbjct: 62  MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+D HK  IP  P  IAV+TS +GAVI DI+   + RFP + + +FP  VQG + 
Sbjct: 122 DKEGLFADSHKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  ++ Q+       +  + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS+
Sbjct: 182 AASIIASLQQIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISS 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL+D  AD RA TPT AAE A P    +   +I L   L   I  +I      
Sbjct: 237 VGHETDTTLSDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKIL 296

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            N       L    +        LD L ++LE      +      +  +   + S     
Sbjct: 297 FNRTKNSVFLREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQ 356

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+ + Q ++ K Q                                              
Sbjct: 357 IIKHHYQELIFKTQ---------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   + + I +   +    ++ L   +    + RGY    + +   +T    +     
Sbjct: 371 -NLNKSMCYLINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGKTVTSVHQICENDI 429

Query: 485 ILINFFDGQANAIVINKA 502
           + +NF DG     V+   
Sbjct: 430 LNLNFKDGLVKTRVLKIK 447


>gi|219669512|ref|YP_002459947.1| exodeoxyribonuclease VII large subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219539772|gb|ACL21511.1| exodeoxyribonuclease VII, large subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 403

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 208/361 (57%), Gaps = 11/361 (3%)

Query: 13  PEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             ++V+EL+  +   +    +  +  V GEIS Y+    SGH YF+LKD  S +  ++++
Sbjct: 3   KIWTVAELTREIGQTLNDNPDFVNCWVSGEISNYKNHRPSGHWYFTLKDEQSSMKGVMFR 62

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++ F P++G++ LV G I  +      Q+  E + PSG G L  A E+ K++L +E
Sbjct: 63  SRAERVRFTPQDGMKVLVRGSIRIYERDGTIQLYAEEMQPSGVGALYLAFEQLKERLGQE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF+ + K  IP  P+ I ++TSPTGA I+DIL+ +  R P +  I+ P  VQG+  PKE
Sbjct: 123 GLFAPERKKAIPRYPRRIGIVTSPTGAAIKDILKVMFRRNPQISWILAPAAVQGELAPKE 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A AI +LN   +       D+II+ RGGGS+E+LW FN E + RAIA S IP+ISA+GH
Sbjct: 183 VAQAIARLNRHSQ------VDVIIVGRGGGSLEELWAFNTEEVARAIAASGIPVISAVGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD T+AD  ADLRAPTP+ AAE+AVPV   L+S L  LEARL++ +   ++ K   L+S
Sbjct: 237 ETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLDS 296

Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L     L N    +  +R RLD L   +E  +   +  K      +  ++     +  + 
Sbjct: 297 LKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAILG 356

Query: 368 K 368
           +
Sbjct: 357 R 357



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 5/168 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++  +++       +       E +  +EQ+  +    +  + + K   L 
Sbjct: 236 HETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLD 295

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L           RI      +  L  R+E  ++  +   +  + + T  L   +    L
Sbjct: 296 SLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAIL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            RGY+       N + +  ++    ++ +    G     V+ K+   +
Sbjct: 356 GRGYSLTYGPKGNVLRKSDDINVGQQVQVRLQQGVLTCAVLAKSVDSD 403


>gi|153839145|ref|ZP_01991812.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ3810]
 gi|149747357|gb|EDM58331.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus
           AQ3810]
          Length = 355

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 10/356 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
            +   ++VS L+  ++ ++E+ +  V + GEIS +     SGH Y +LKD+ +++   ++
Sbjct: 5   TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F P  G + LV  +++ +     YQ+IIES+ P G G L    E+ K KL  
Sbjct: 64  RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF+  +K P+P  PK + +ITS TGA + DIL  +  R P L V+I+P  VQGD+   
Sbjct: 124 EGLFAQTNKLPLPEHPKRVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA AI + N+  E       D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G
Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D T+AD+ AD+RAPTP+ AAE+      H   SL+  + +L + +   +  +     
Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSA 297

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
            LL  L   +    L     +LD L   L   ++  I  + +      +R++ +  
Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSP 353



 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
            +     Q ++ KQ  +   ++ +L     +  + +  L   R+    ++      + +L
Sbjct: 265 RDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSAQLLHRLE--RQHPSYQLQRQSQQLDEL 322

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             R+   +   I +   +V      LQ  +   
Sbjct: 323 DMRLRRAMQRFIDTRQQAVERKHHRLQLNSPVK 355


>gi|302389867|ref|YP_003825688.1| Exodeoxyribonuclease VII large subunit [Thermosediminibacter oceani
           DSM 16646]
 gi|302200495|gb|ADL08065.1| Exodeoxyribonuclease VII large subunit [Thermosediminibacter oceani
           DSM 16646]
          Length = 410

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 138/364 (37%), Positives = 205/364 (56%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  P  +VSEL+  +K++ +SN  L  V VRGEIS ++  H SGH YF LKD  ++I  +
Sbjct: 1   MAAPVLTVSELTGIIKYLFDSNEILRQVYVRGEISNFK-YHLSGHIYFVLKDEKAQIRCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     + F+PE G+  +  G +T +  + +YQ+ ++ + P G G L  A EK K KL
Sbjct: 60  MFKNKSVLLPFMPENGMRVVAFGYVTVYEKNGEYQLYVDDMEPDGIGALYLAYEKLKAKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K  IPF+PK I +ITS  GA I+D+L  I  RFP + ++I PV VQG + 
Sbjct: 120 QKEGLFDANRKKAIPFLPKNIGIITSINGAAIKDLLTVIRRRFPNVNILIAPVSVQGKQA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI  AI  LN +       + D+II+ARGGGSIE+LW FN+E + RAI +S IPIISA
Sbjct: 180 ADEICEAIKDLNRI------GKLDVIIVARGGGSIEELWTFNEEKVARAIYSSRIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ AD RAPTP+ A EM VP K  L + +   + R+   +   +  +   
Sbjct: 234 VGHETDYTIADFVADKRAPTPSAAGEMVVPEKNQLLADIDQRKKRIIAAMCAFLNTRKQG 293

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +  + +          +  +R +LD L R L       I  K      ++ R+     + 
Sbjct: 294 IEYIRRSVVFRKLRSEVDNNRIQLDVLTRRLLRETMNQITVKKSALKSLMGRLDVLSPLS 353

Query: 365 NIQK 368
            + +
Sbjct: 354 VLDR 357



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 53/139 (38%), Gaps = 2/139 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK-EKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +  Q + +  Q  ++I+     ++   K+  +     ++  + ++ +      +  L  R
Sbjct: 264 EKNQLLADIDQRKKRIIAAMCAFLNTRKQGIEYIRRSVVFRKLRSEVDNNRIQLDVLTRR 323

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRI 485
           +     ++I    +++      L   +  + L RGY+  Q  ++   + +   +++   +
Sbjct: 324 LLRETMNQITVKKSALKSLMGRLDVLSPLSVLDRGYSICQTIDDLRIVKRVEEVSSGEEV 383

Query: 486 LINFFDGQANAIVINKAPP 504
            +   +G     V +K   
Sbjct: 384 KVILSNGYLLCEVRSKGKK 402


>gi|309804240|ref|ZP_07698317.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 11V1-d]
 gi|309805566|ref|ZP_07699611.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 09V1-c]
 gi|308163643|gb|EFO65913.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 11V1-d]
 gi|308165217|gb|EFO67455.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 09V1-c]
          Length = 445

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 58/494 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V++L+++L    +++  L  V ++GE+S +R   +S   YFSLKD  S+I+A+
Sbjct: 3   TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F   EG++  V G I  +     YQ  + ++ P+G G L   L + ++KL
Sbjct: 62  MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF+D HK  IP  P  IAV+TS +GAVI DI+   + RFP + + +FP  VQG + 
Sbjct: 122 DKEGLFADSHKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  ++ Q+       +  + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS+
Sbjct: 182 AASIIASLQQIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISS 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL+D  AD RA TPT AAE A P    +   +I L   L   I  +I      
Sbjct: 237 VGHETDTTLSDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKIL 296

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            N       L    +        LD L ++LE      +      +  +   + S     
Sbjct: 297 FNRTKNSVFLREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQ 356

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I+ + Q ++ K Q                                              
Sbjct: 357 IIKHHYQELIFKTQ---------------------------------------------- 370

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   + + I +   +    ++ L   +    + RGY    + +   +T    +     
Sbjct: 371 -NLNKSMCYLINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGKTVTSVHQICENDI 429

Query: 485 ILINFFDGQANAIV 498
           + +NF DG     V
Sbjct: 430 LNLNFKDGLVKTRV 443


>gi|52548905|gb|AAU82754.1| exonuclease VII large subunit [uncultured archaeon GZfos19C8]
          Length = 447

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 211/363 (58%), Gaps = 8/363 (2%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
               YSV E++ +++  ++ +  LS V V+GE+S      +SGH YF+LKD  S +  ++
Sbjct: 40  TQHIYSVQEVTSYIRRRLDEDSMLSDVYVKGELSNL-SQPTSGHLYFTLKDKFSELRCVM 98

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F PE+G+  ++ G I+ +     YQ+ ++ L   G G L  A E+ KKKL 
Sbjct: 99  FRDKNRGLKFRPEDGMSVILRGHISVYERRGSYQLYVDELQAEGIGALYLAFEQLKKKLK 158

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  ++K PIP  P+ I +ITSPTGA IRD+L     RFP + +++ PV VQG+E P
Sbjct: 159 GEGLFDPKYKKPIPSFPRKIGIITSPTGAAIRDMLNITKRRFPHVHILLAPVAVQGEEAP 218

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I NAI  +N + E R   + D+++L RGGGSIE+LW FN+E + R I  S IP+ISA+
Sbjct: 219 GQIVNAIRLMNRVNEER--MKIDVLVLGRGGGSIEELWAFNEEAVAREIFASKIPVISAV 276

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ AD RA TP+ AAE+AVP K  ++ +L +L  R+   I   I+Y    L
Sbjct: 277 GHETDFTIADFVADRRAATPSEAAELAVPDKREIERNLSSLALRMQQNIYNTIEYHRKRL 336

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            S+ K +      + ++  R  +D L R +      ++    +    +  ++ +   +  
Sbjct: 337 ESIEKNILFRKPTERINQHRQTVDELKRTIFAASTHLVILHRKSLQALTGKLDALSPLSI 396

Query: 366 IQK 368
           + +
Sbjct: 397 LDR 399



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427
           ++ I      +   ++Q++       ++++  +  ++L  +   RI      + +L   I
Sbjct: 307 KREIERNLSSLALRMQQNIYNTIEYHRKRLESIEKNILFRKPTERINQHRQTVDELKRTI 366

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486
               +H +     S+   T  L + +  + L RGY+   +  +   I    +++    + 
Sbjct: 367 FAASTHLVILHRKSLQALTGKLDALSPLSILDRGYSICSRLPDGKIIRSVEDISVGVVLT 426

Query: 487 INFFDGQANAIVINKAPPKE 506
           I F DG+A + V  K   K+
Sbjct: 427 ILFTDGEATSEVKEKWTKKK 446


>gi|113866636|ref|YP_725125.1| exodeoxyribonuclease VII large subunit [Ralstonia eutropha H16]
 gi|113525412|emb|CAJ91757.1| Exodeoxyribonuclease VII, large subunit [Ralstonia eutropha H16]
          Length = 476

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 130/504 (25%), Positives = 222/504 (44%), Gaps = 57/504 (11%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +P S           V EL++ +  ++E +     VRGEIS +    +SGH YFSLKD  
Sbjct: 25  DPSSTAPRSGRDVIPVGELNHTIARLLERSFPLAWVRGEISNFT-RAASGHWYFSLKDAR 83

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           ++I  ++++G    ++F P EG    V   +T +    + Q+ +E++  +G G L  A  
Sbjct: 84  AQIRCVMFRGRNQHVDFQPREGEAVEVRAVVTMYEARGEVQLGVEAMRRAGLGNLYEAFL 143

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180
           + K+KL + GLF+ + K P+P  P+ I V+TS   A +RD+L  +  R   + V+++PV 
Sbjct: 144 RLKEKLAQAGLFAPERKRPVPAHPRTIGVVTSLQAAALRDVLTTLRRRAPHVPVLVYPVP 203

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG    ++IA+ +   +  +E       D++IL RGGGSIEDLW FN+E++ +AIA  +
Sbjct: 204 VQGAGAAQKIADMLDAASARRE------CDVLILCRGGGSIEDLWSFNEEVVAQAIARCA 257

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+IS +GHETD+T+AD+ AD+RAPTPTGAAE+  P + HL +  +     L   + R +
Sbjct: 258 LPVISGVGHETDFTIADFVADVRAPTPTGAAELVSPDRAHLLAQAMRARDALTQCMRRGL 317

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+ L + + +    L   R R+D L R L   L   +  +      +  R  + 
Sbjct: 318 DLRAQHLDWLARRVRSPQAQLQERRARVDNLARHLRSALRDTVVSQRHRQQLLAMRWSAC 377

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               +       +    Q ++    +               L +L               
Sbjct: 378 RPDASAAHA--DVARLWQRLQAAAVRQHERAGQRLARSAGALELL--------------- 420

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                         ++                       RGY  + D     +     + 
Sbjct: 421 ---------APQRTLE-----------------------RGYAVLLDQRGRALRSPAEIR 448

Query: 481 TKTRILINFFDGQANAIVINKAPP 504
             + +  +   G A+  +      
Sbjct: 449 AGSVVEAHLAKGVADLAIAGVQAK 472


>gi|296876936|ref|ZP_06900981.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432067|gb|EFH17869.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis
           ATCC 15912]
          Length = 463

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W
Sbjct: 19  SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 76

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G      F  EEG++  VIG+I  +  S  Y I+IE   P G G L    E+ KKKL E
Sbjct: 77  AGVYRSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 136

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF DQ K  +P  P+ I VITS +GAVIRDI+  +S RFP + ++++P KVQG+    
Sbjct: 137 EGLFQDQWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGASS 196

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+   I + N           D++I+ RGGGSIEDLW FN+E +VRAI  S IPIIS++G
Sbjct: 197 EVVANIQRANQR------DDLDVLIIGRGGGSIEDLWAFNEEAVVRAIFESRIPIISSVG 250

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +    S +  +   +   +   + Y    L
Sbjct: 251 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 310

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L +       ++       ++D+L   L+  +     +       + +R+++   +H 
Sbjct: 311 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMRDAYGQGANQLQGLRHRLEATSPLHR 370

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ +  +L+ ++ +                                             
Sbjct: 371 IERYQDRLLQDKRILTNR------------------------------------------ 388

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +   +K     V   +  L        + RGY  ++  ++  +     +     +
Sbjct: 389 -----MEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-QDDQVLDSVAKVKEGDPL 442

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 443 SLIMRDGQLEVEVKHVERKE 462


>gi|320546349|ref|ZP_08040666.1| exodeoxyribonuclease VII large subunit [Streptococcus equinus ATCC
           9812]
 gi|320449003|gb|EFW89729.1| exodeoxyribonuclease VII large subunit [Streptococcus equinus ATCC
           9812]
          Length = 442

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 151/491 (30%), Positives = 227/491 (46%), Gaps = 62/491 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W GT
Sbjct: 5   LSVSTLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPGGIGALAVQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F D+HK  +P   K I V+TSP+GAVIRDI+  +S RF  + +++FP KVQG+   +E+A
Sbjct: 123 FDDRHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFQGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
                 N + +       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ------NNIAKASERDDLDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLADY AD RA TPT AAE+A PV +    S     E R+    +R IK     L+ L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWISERENRMYQASLRRIKQNQERLDKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL   L + ++    +  +    +  R+ +      I+ 
Sbjct: 297 ANSVIFRQPERLYDGYVQKLDRLTMSLTNTMKNQFNQAKQSHALLHQRLLALDFESQIKH 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDKLQSLERLLLSNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  N   I+   ++    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEKVISSVSDVKVGDQLTIQ 428

Query: 489 FFDGQANAIVI 499
             DGQ  A V 
Sbjct: 429 LKDGQLEAEVK 439


>gi|55821225|ref|YP_139667.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus
           LMG 18311]
 gi|116627951|ref|YP_820570.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus
           LMD-9]
 gi|81820446|sp|Q5M3Z1|EX7L_STRT2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122267453|sp|Q03K98|EX7L_STRTD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|55737210|gb|AAV60852.1| exodeoxyribonuclease VII, large subunit [Streptococcus thermophilus
           LMG 18311]
 gi|116101228|gb|ABJ66374.1| Exodeoxyribonuclease VII large subunit [Streptococcus thermophilus
           LMD-9]
 gi|312278539|gb|ADQ63196.1| Exodeoxyribonuclease 7 large subunit [Streptococcus thermophilus
           ND03]
          Length = 446

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 156/494 (31%), Positives = 231/494 (46%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ +LK   + +  L  V + G++S YR   S  H YFSLKD  + I A IW G 
Sbjct: 5   LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPS--HQYFSLKDEGAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             KI F  EEG++  V+G++  +  S  Y +IIE   P G G L    E+ +KKL  EG 
Sbjct: 63  FKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEPDGIGALALQFEQLRKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK P+P   K I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +EI 
Sbjct: 123 FDDRHKQPLPNFVKKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V++I  S +P+IS++GHET
Sbjct: 183 ENIQKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  K    + +   + R     +R I+Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL   LE  +     RK +    +  R+    L   ++ 
Sbjct: 297 SQSVVFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKSAEFLRQRLHGLNLSTRVKN 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +      Q+                                                + 
Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
               + I      +      L S      + RGY  + + N+  +T  +++    ++ I 
Sbjct: 370 TTTKNTINGNRVRLEKAQDALLSLDTSRIVARGYAIV-NKNDKPLTTIKDITEGEQLTIQ 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 MRDGQLEVEVKNVN 442


>gi|125973351|ref|YP_001037261.1| exodeoxyribonuclease VII large subunit [Clostridium thermocellum
           ATCC 27405]
 gi|256005457|ref|ZP_05430420.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum
           DSM 2360]
 gi|281417551|ref|ZP_06248571.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum
           JW20]
 gi|125713576|gb|ABN52068.1| Exodeoxyribonuclease VII large subunit [Clostridium thermocellum
           ATCC 27405]
 gi|255990597|gb|EEU00716.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum
           DSM 2360]
 gi|281408953|gb|EFB39211.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum
           JW20]
 gi|316940417|gb|ADU74451.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum
           DSM 1313]
          Length = 411

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/373 (37%), Positives = 222/373 (59%), Gaps = 14/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLK 58
           M  F   N  +    +VS ++ ++K I+  +L  S++ VRGEIS ++  HSSGH YF+LK
Sbjct: 1   MGEFFSDNCDN--ILTVSAVNRYIKEIMSRDLILSNLWVRGEISNFK-YHSSGHMYFTLK 57

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D +  +  ++++     ++F+PE G++ +V G I+ F    +YQ+  E +   G G L  
Sbjct: 58  DENCSLKCVMFRTYNLHLKFMPENGMKVIVKGYISVFERDGQYQLYAEEMQNDGIGDLYI 117

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIF 177
           A E+ K++L  EGLF   HK  IPF+P+ I V+TS TG+VIRDI+  +  RF    + IF
Sbjct: 118 AFEQLKRRLASEGLFDPAHKKKIPFMPRTIGVVTSATGSVIRDIMNILDRRFYNSYIKIF 177

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV+VQG+    EI++AI +LN           D+IILARGGGS+E+LW FN+E++ R+I 
Sbjct: 178 PVRVQGETAALEISHAISKLN------EIGGVDVIILARGGGSLEELWPFNEEIVARSIF 231

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           NSSIP+ISA+GHETD+T+AD+ ADLRAPTP+ AAE+ +P K  + + +  L  R+ + + 
Sbjct: 232 NSSIPVISAVGHETDYTIADFVADLRAPTPSAAAELVMPEKVTIINRIRELNVRMVDALQ 291

Query: 298 RLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           R +K K + L  L            +   R +LD L R+L+ ++   + R       +I 
Sbjct: 292 RNVKQKRDMLKKLADSVVFRQPYDRIYQERMKLDILNRDLKKSMFASLERAGSKLGFLIG 351

Query: 356 RIKSDFLIHNIQK 368
           ++ +   +  + +
Sbjct: 352 KLDALSPLTILSR 364



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 6/165 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +      +     I ++  + +  +    K+K  +L 
Sbjct: 243 HETDYTIADFVADLRAPTPSAAAELVMPEKVTIINRIRELNVRMVDALQRNVKQKRDMLK 302

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L       Q  +RI+     +  L   ++  +   ++   + +      L + +    L
Sbjct: 303 KLADSVVFRQPYDRIYQERMKLDILNRDLKKSMFASLERAGSKLGFLIGKLDALSPLTIL 362

Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            RGY  I+      F+    ++     I ++  DG+    V  K 
Sbjct: 363 SRGYGIIKSEEKGIFVKSVNDVDVGEGIEVSVKDGRLYCTVRKKE 407


>gi|45657463|ref|YP_001549.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|73919343|sp|Q72RZ7|EX7L_LEPIC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|45600702|gb|AAS70186.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 422

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/495 (27%), Positives = 212/495 (42%), Gaps = 79/495 (15%)

Query: 11  DHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           D    SVSE++  +K+++    +L ++ VRGEIS Y    SSGH YFSLKD  S I    
Sbjct: 3   DSKPLSVSEVTRIIKNLISGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDAGSLIRCTF 61

Query: 69  WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +  +       P  +G E  V G IT +     Y + +  +   G G +L  +EK K+KL
Sbjct: 62  FNYSNKNYSGKPLSDGKEIQVYGTITLYEAGGSYNLNVTRVEELGQGDILLQIEKLKQKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EG+F  + K  IP  PK + + TSPTGA I DI++    RFP + ++I P  VQG++ 
Sbjct: 122 AVEGIFDPEKKRRIPSFPKTLGIATSPTGAAIEDIIKISRSRFPGINILIAPCIVQGEDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P  I  AI +LN         + D+II  RGGGS EDL  FNDE +VRA ANS IPIISA
Sbjct: 182 PDSIVAAIEELN-----HPNWKVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRIPIISA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GH+TD  L+D+AAD   PTPT AAE A+P +E +                         
Sbjct: 237 VGHQTDVLLSDFAADHFTPTPTAAAEYAIPKEEDVL------------------------ 272

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                                L +L   ++ +L   I         +  +      +  +
Sbjct: 273 -------------------QFLSQLEGRIKSSLVTKISSNRDRLRLLSGKFIFKEPMQLL 313

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q + E    +++ +                          N++      +++    
Sbjct: 314 NQRSQRVDEIGIRLQKAL-------------------------SNKLNLARVRLERY-QN 347

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + + +          T  ++  +   T+KRGY+ +++ N   I        +  + 
Sbjct: 348 LTSRIQNILFHKKQKAEFWTSKVEDLSPAATMKRGYSILRNENGKIIRSPEETKPEEELQ 407

Query: 487 INFFDGQANAIVINK 501
           +    G    I   K
Sbjct: 408 VLLSGGTMQVIRKGK 422


>gi|225018825|ref|ZP_03708017.1| hypothetical protein CLOSTMETH_02775 [Clostridium methylpentosum
           DSM 5476]
 gi|224948385|gb|EEG29594.1| hypothetical protein CLOSTMETH_02775 [Clostridium methylpentosum
           DSM 5476]
          Length = 398

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 139/379 (36%), Positives = 208/379 (54%), Gaps = 12/379 (3%)

Query: 13  PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           P YSVSE++  +K I   E     + +RGEIS +     SGH YF+LKD  S I  ++++
Sbjct: 2   PSYSVSEVNRFIKQIFAAEDIFYGLHIRGEISNFVNHVRSGHFYFTLKDQTSSIKCVMFR 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
              +++ FLPE G+  ++ G +  F     YQ+ +  + P G+G L  A E+ KKKL  E
Sbjct: 62  SNASRLPFLPENGMNVILRGDVQVFERDGVYQVYVADIQPDGTGALYMAYEQLKKKLDAE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           GLF  Q K P+P  P  I VITS TGA ++DIL  +  R+P+  V +FP  VQG++ P+ 
Sbjct: 122 GLFDPQRKRPLPPYPGAIGVITSKTGAALQDILNILRRRYPVCTVKLFPALVQGEQAPES 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  A  + N           D++I+ RGGGS+EDLW FNDE + RAIA   +P+ISA+GH
Sbjct: 182 IIQAFARANRTP-------LDLVIVGRGGGSLEDLWAFNDEGVARAIAGCRVPVISAVGH 234

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T+AD+AADLRAPTP+ AAE+AVP   +L++ + N    + N  +  ++     L+S
Sbjct: 235 EVDYTIADFAADLRAPTPSAAAELAVPDIVNLRTMIDNYAEMVYNYTVSSLQNGEQQLDS 294

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L        L  S + L+ L   L  + E +  R  + F      ++S   +  + 
Sbjct: 295 LSTRLMARAPGAVLEHSCHSLESLDSRLHLSFEGMYGRCGQRFAAAAGMLESLSPLKVLT 354

Query: 368 KNRQHILEKQQHIEQIVKQ 386
           +      +K   I +  +Q
Sbjct: 355 RGYSITFDKSGKIARSAEQ 373



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 5/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                        +++       +     I+  +  I+   +    Y     +     L 
Sbjct: 234 HEVDYTIADFAADLRAPTPSAAAELAVPDIVNLRTMIDNYAEMVYNYTVSSLQNGEQQLD 293

Query: 404 MLREQTKNR-----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L  +   R     + +    ++ L +R+          C    +    +L+S +    L
Sbjct: 294 SLSTRLMARAPGAVLEHSCHSLESLDSRLHLSFEGMYGRCGQRFAAAAGMLESLSPLKVL 353

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            RGY+   D +         L    RI   F DG+  ++V  K 
Sbjct: 354 TRGYSITFDKSGKIARSAEQLKPGNRITTRFHDGEVVSVVAEKE 397


>gi|162450747|ref|YP_001613114.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So
           ce 56']
 gi|161161329|emb|CAN92634.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So
           ce 56']
          Length = 536

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 139/494 (28%), Positives = 214/494 (43%), Gaps = 56/494 (11%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73
           SV+EL   LK I+E + + V V GEISG R +  SGHAYF+LKD    + ID ++++   
Sbjct: 3   SVAELDRRLKRILEGSTADVRVEGEISGLRVV-GSGHAYFTLKDESEEAAIDCVMYRTAA 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +   L  +G   ++ G+ T +    + Q   +    +G G LL AL + K+KL  EGLF
Sbjct: 62  PRARKLLADGARVVLTGRATVYVPRGRLQFSADDARLAGRGALLEALFRLKEKLAAEGLF 121

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193
           + + K  +P  P+II V+TS  GA I DI+     R   R+I+    VQG    + I  A
Sbjct: 122 APERKRKLPVDPQIIGVVTSGDGAAIHDIVTVAFRRGGARLILARTPVQGAGAGQRIVRA 181

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I  L         P  ++II+ RGGGS +DL  FN+E++VR +A + +PI+SA+GHE D 
Sbjct: 182 IALL------EEFPGIEVIIVGRGGGSADDLSAFNEEIVVRKVAAARVPIVSAVGHEIDV 235

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L D AAD RA TP+ AAEM V      +++L +LEAR+   I   ++     L+     
Sbjct: 236 ALTDLAADARAATPSQAAEMLVADAAARRAALEHLEARMRRAIAHRLRGARADLDRQRAR 295

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L +  Q L+  + R+D     L   +E I+         +  R+ +      +   R  +
Sbjct: 296 LGSPAQILAEPQQRIDDAMARLRRRMERILVEDRAALQRLERRLAARHPRAVLAGARGAL 355

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                 +     +H                                              
Sbjct: 356 RPLSVRLAAAAHRH---------------------------------------------- 369

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +       +     L++ +    L RGY    D +   +   R +A    I +    G 
Sbjct: 370 -VALLREGFAGDVARLEAMSPLRVLARGYAIATDGSGRAVRDHREVAPGDPIAVRVHHGA 428

Query: 494 ANAIVINKAPPKEQ 507
             A V+  A P E 
Sbjct: 429 LLARVVVTAGPDEP 442


>gi|91773480|ref|YP_566172.1| exodeoxyribonuclease VII large subunit [Methanococcoides burtonii
           DSM 6242]
 gi|91712495|gb|ABE52422.1| Exodeoxyribonuclease VII, large subunit [Methanococcoides burtonii
           DSM 6242]
          Length = 407

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 12/360 (3%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           P Y+V+EL+  +K+ + +N  L+ + V+GEIS     HSSGH YF++KD  S+I  + +K
Sbjct: 2   PAYTVTELNNLIKNTLTNNPKLNQIWVQGEISNLT-KHSSGHYYFTVKDGKSQISCVSFK 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F  E  ++ LV G +  +    +YQ+ ++ + P G G L  A E+ K KL +E
Sbjct: 61  SVNRNLRFELESSMKVLVFGSVDVYVVRGQYQLYVQDIRPDGVGELYKAYEQLKNKLEQE 120

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190
           GLFSD HK PIP  P  I V+TSPTGA I DIL  I  R+P+ +++ P  VQG+   + I
Sbjct: 121 GLFSDVHKIPIPGYPLRIGVVTSPTGAAIHDILNVIRRRYPVNILLSPTIVQGERSAESI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             +I  LN           D+II+ RGGGS+EDLW FN+E++ RAI NS  PI+SA+GHE
Sbjct: 181 VRSIELLNQ-------TDVDVIIVGRGGGSLEDLWSFNEEVVARAIFNSKKPIVSAVGHE 233

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ AD+RAPTP+ AAE+ VP ++ ++  L  L +RL N +  +I      L  +
Sbjct: 234 TDFTIADFTADMRAPTPSAAAELVVPDQKEVKRHLATLSSRLENEVEHVISQGKGRLEQI 293

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            K L   +    L      LD L  +L  ++   I  K        +++ +   ++ I +
Sbjct: 294 RKKLEPQHIMDMLLQDSQYLDELTMKLTSSMGKTIVDKTFELKFHSSKLNAVSPLNTILR 353



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 51/139 (36%), Gaps = 3/139 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++H+      +E  V+  +       ++    L    +   + +     ++ +L  ++  
Sbjct: 265 KRHLATLSSRLENEVEHVISQGKGRLEQIRKKLEP--QHIMDMLLQDSQYLDELTMKLTS 322

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILIN 488
            +   I      +   +  L + +  NT+ RGY+   D  N+  I+    L    ++ + 
Sbjct: 323 SMGKTIVDKTFELKFHSSKLNAVSPLNTILRGYSIAIDPVNDLSISSVTELGDNDQLDVI 382

Query: 489 FFDGQANAIVINKAPPKEQ 507
             DG     + N    +++
Sbjct: 383 VNDGIFECKIENIIHSRKK 401


>gi|55823137|ref|YP_141578.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus
           CNRZ1066]
 gi|81820283|sp|Q5LZD9|EX7L_STRT1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|55739122|gb|AAV62763.1| exodeoxyribonuclease VII, large subunit [Streptococcus thermophilus
           CNRZ1066]
          Length = 446

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 155/494 (31%), Positives = 230/494 (46%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+ L+ +LK   + +  L  V + G++S YR   S  H YFSLKD  + I A IW G 
Sbjct: 5   LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPS--HQYFSLKDEGAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             KI F  EEG++  V+G++  +  S  Y +IIE   P G G L    E+ +KKL  EG 
Sbjct: 63  FKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEPDGIGALALQFEQLRKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK P+P   K I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +EI 
Sbjct: 123 FDDRHKQPLPNFVKKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V++I  S +P+IS++GHET
Sbjct: 183 ENIQKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  K    + +   + R     +R I+Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L   LE  +     RK +    +  R+    L   ++ 
Sbjct: 297 SQSVVFRQPERLYDGYLQKLDHLTTRLETFMSQDFERKQKSAEFLRQRLHGLNLSTRVKN 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +      Q+                                                + 
Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
               + I      +      L S      + RGY  + + N+  +T  +++    ++ I 
Sbjct: 370 TTTKNTINGNRVRLEKAQDALLSLDTSRIVARGYAIV-NKNDKPLTTIKDITEGEQLTIQ 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 MRDGQLEVEVKNVN 442


>gi|171778675|ref|ZP_02919771.1| hypothetical protein STRINF_00623 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282632|gb|EDT48056.1| hypothetical protein STRINF_00623 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 442

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 144/492 (29%), Positives = 223/492 (45%), Gaps = 62/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I A +W GT
Sbjct: 5   LSVSTLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALALQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKRQLPRFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLADY AD RA TPT AAE+A PV +    S I                +       L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERDNRIYQAALRRIKQSQERLDKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL   L + ++    +  +    +  R+ +      I+ 
Sbjct: 297 ANSVIFRQPERLYDGYVQKLDRLVMSLINTMQNQFSQAKQRQELLHQRLLALDFDSQIKH 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            + ++   ++ +   +                                            
Sbjct: 357 YKDNLQSLRRLLLSNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  ++  I+   ++    ++ + 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KDDKVISSVTDVNLGDKLTVQ 428

Query: 489 FFDGQANAIVIN 500
             DGQ    V +
Sbjct: 429 LKDGQLEVEVKD 440


>gi|306833001|ref|ZP_07466133.1| exodeoxyribonuclease VII large subunit [Streptococcus bovis ATCC
           700338]
 gi|304424900|gb|EFM28034.1| exodeoxyribonuclease VII large subunit [Streptococcus bovis ATCC
           700338]
          Length = 442

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 147/492 (29%), Positives = 228/492 (46%), Gaps = 62/492 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD ++ I + +W GT
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQSTMWAGT 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLADY AD RA TPT AAE+A PV +    S I             +  +       L
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRMIKQKQERLDKL 296

Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL  +L + ++    +  +    +  R+ +  L  +I++
Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLMNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +   Q+ +   +                                            
Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  +Q  N   I+   ++A   ++ + 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVAVGDQLTVR 428

Query: 489 FFDGQANAIVIN 500
             DGQ    V +
Sbjct: 429 LRDGQLEVEVKD 440


>gi|154498047|ref|ZP_02036425.1| hypothetical protein BACCAP_02028 [Bacteroides capillosus ATCC
           29799]
 gi|150273037|gb|EDN00194.1| hypothetical protein BACCAP_02028 [Bacteroides capillosus ATCC
           29799]
          Length = 399

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/363 (38%), Positives = 209/363 (57%), Gaps = 12/363 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   YSVS+++ ++K +++ +  LS + +RGEIS Y+    SGH YFS+KD    I  ++
Sbjct: 3   NDTVYSVSQVNQYIKDLLDGDGALSGIYIRGEISNYKMYP-SGHHYFSMKDEGGAIRCVM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++   + + F PE G++ +  G++T FP   +YQ+ + +L P G G L  A E+ K KL 
Sbjct: 62  FRREASALRFRPENGMKVVAFGRVTVFPRDGQYQLYVSALTPDGVGDLYVAFEQLKAKLY 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLF   HK PIP  P+ IA++TS  GA +RD+L+ +  R+P+ +V + PV+VQG E P
Sbjct: 122 AEGLFDPAHKKPIPRFPRRIALVTSAAGAAVRDMLRILGARWPMAQVAVVPVRVQGAEAP 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            EIA A+  +N L         D+II  RGGGS+EDLW FN+E++ RAI  S +P+ISA+
Sbjct: 182 GEIAAALGWVNRLGWA------DLIITGRGGGSMEDLWAFNEEIVARAIYASQVPVISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKIN 305
           GHE D T+AD+ ADLRA TP+ AAE+AVP +  +   L  L AR+   + R         
Sbjct: 236 GHEPDVTIADFVADLRAATPSNAAELAVPDQNDVAGRLNQLSARMEQAMSRRLGEFSSKL 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
              S  +AL N    +   R  LD     L H L   + R+ +HF  +   + +   +  
Sbjct: 296 ERLSGSRALQNPMNYIEDRRVLLDYQRTRLAHGLSGTLNRERQHFARLAASLDAMSPLKV 355

Query: 366 IQK 368
           + +
Sbjct: 356 LAR 358



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 2/133 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427
           +  +  +   +   ++Q +     E   K+  L      +   N I      +    TR+
Sbjct: 266 QNDVAGRLNQLSARMEQAMSRRLGEFSSKLERLSGSRALQNPMNYIEDRRVLLDYQRTRL 325

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              LS  +       +     L + +    L RGY   +  +   +  K ++A    + +
Sbjct: 326 AHGLSGTLNRERQHFARLAASLDAMSPLKVLARGYAIPRLEDGTVVRSKTDVAAGDALRL 385

Query: 488 NFFDGQANAIVIN 500
              DG+   IV  
Sbjct: 386 RVADGEIPCIVKE 398


>gi|158320643|ref|YP_001513150.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|166919630|sp|A8MFJ1|EX7L_ALKOO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158140842|gb|ABW19154.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus oremlandii
           OhILAs]
          Length = 408

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 136/359 (37%), Positives = 217/359 (60%), Gaps = 12/359 (3%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SVSE++ ++K I+  +  LSH+ V+GEIS YR +HSSGH YF+LKD +S+I  +
Sbjct: 1   MQIKALSVSEVNQYMKRILGSDPILSHIYVKGEISNYR-LHSSGHMYFTLKDKNSKISCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K++F PEEG+  +  G ++ +    + Q+ +  + PSG G L  A ++ K +L
Sbjct: 60  MFKGNCEKLKFFPEEGMSLVCKGYVSIYEKDGQVQLYVNDMEPSGIGALHLAFQQLKDRL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  ++K  IP IP+ IA+ITSPTGA IRD++  I  RFP + + IFPV VQG+  
Sbjct: 120 NKEGLFDTKYKQEIPLIPRRIALITSPTGAAIRDMVSIILRRFPQVELCIFPVLVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I  AI   N        P  D+ I+ RGGGSIE+LW FN+E + RAI NS +PIISA
Sbjct: 180 VETIVKAIELCNR------YPGIDLAIVGRGGGSIEELWAFNEEKVARAIFNSRVPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRA TP+ AAE+AVP +  L+  + ++E R+ +++   +      
Sbjct: 234 VGHETDFTISDFVADLRAATPSSAAELAVPNRVELREYIDSMEKRMIHLMKTKLNTSYQK 293

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
           L+ +            +   +  ++ L ++++  + +     +RH  ++  R+ S   +
Sbjct: 294 LSFIENSYFFRYPLNPIYDKQQYINDLLQKIKSAINVKKQFNHRHLKYLGERLHSLSPL 352



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 2/131 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R++I   ++ +  ++K   +     +K              N I+    +I  L+ +I+ 
Sbjct: 269 REYIDSMEKRMIHLMKT--KLNTSYQKLSFIENSYFFRYPLNPIYDKQQYINDLLQKIKS 326

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            ++ K +  H  +      L S +  +   RGY+ ++++  + +    ++    R+ I+ 
Sbjct: 327 AINVKKQFNHRHLKYLGERLHSLSPLSIFSRGYSIVRNSEGSIVKSTDHVQVDERLCIDV 386

Query: 490 FDGQANAIVIN 500
            DG+ N  VI 
Sbjct: 387 IDGEINCKVIE 397


>gi|268324170|emb|CBH37758.1| probable exonuclease VII, large subunit [uncultured archaeon]
          Length = 444

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 132/363 (36%), Positives = 213/363 (58%), Gaps = 8/363 (2%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
               YSV E++ +++  ++ +  LS V V+GE+S      +SGH YF+LKD  S +  ++
Sbjct: 37  TQHIYSVQEVTSYIRRRLDEDSMLSDVYVKGELSNL-SQPTSGHLYFTLKDKFSELRCVM 95

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++     ++F PE+G+  ++ G I+ +     YQ+ ++ L   G G L  A E+ KKKL 
Sbjct: 96  FRDKNRGLKFTPEDGMSVILRGHISVYERRGSYQLYVDELQAEGIGALYLAFEQLKKKLK 155

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  ++K PIP  P+ I +ITSPTGA IRD+L     RFP + +++ PV VQG++ P
Sbjct: 156 GEGLFDSKYKKPIPSFPRKIGIITSPTGAAIRDMLNITKRRFPHVYILVAPVAVQGEDAP 215

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           ++I NAI  +N + E R   + D+++L RGGGSIE+LW FN+E + R I  S IP+ISA+
Sbjct: 216 RQIVNAIRLMNRVNEER--MKIDVLVLGRGGGSIEELWAFNEEDVAREIFASKIPVISAV 273

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ AD RA TP+ AAE+AVP K  ++ +L +LE R+   I   I+Y    L
Sbjct: 274 GHETDFTIADFVADRRAATPSEAAELAVPDKREIERNLSSLELRMQQNIYNTIEYHRKRL 333

Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            S+ K +      + ++  R  +D L R +      ++    +    +  ++ +   +  
Sbjct: 334 ESIEKNILFRKPTERINQHRQTVDELKRTIFAASTHLVTLHRKSLQALTGKLDALSPLAI 393

Query: 366 IQK 368
           + +
Sbjct: 394 LDR 396



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427
           ++ I      +E  ++Q++       ++++  +  ++L  +   RI      + +L   I
Sbjct: 304 KREIERNLSSLELRMQQNIYNTIEYHRKRLESIEKNILFRKPTERINQHRQTVDELKRTI 363

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486
               +H +     S+   T  L + +    L RGY+   +  +   I    +++    + 
Sbjct: 364 FAASTHLVTLHRKSLQALTGKLDALSPLAILDRGYSICSRLPDGKIIRTVEDISVGDVLT 423

Query: 487 INFFDGQANAIVINKAPPKE 506
           I F DG+A + V  K   K+
Sbjct: 424 ILFTDGEATSEVKEKWTKKK 443


>gi|221194559|ref|ZP_03567616.1| exodeoxyribonuclease VII, large subunit [Atopobium rimae ATCC
           49626]
 gi|221185463|gb|EEE17853.1| exodeoxyribonuclease VII, large subunit [Atopobium rimae ATCC
           49626]
          Length = 459

 Score =  307 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 128/513 (24%), Positives = 206/513 (40%), Gaps = 64/513 (12%)

Query: 1   MNPFSQKNSLDHP--------EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSG 51
           M  FS   S D            SVSE    +K  + + +  + V GE+SG+RG    SG
Sbjct: 1   MWDFSDTPSEDMNFKEKEEKHVLSVSEAIIVIKENI-TRIPLLTVVGEVSGFRGPNARSG 59

Query: 52  HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           H YF +KD  + + AI+WKG          +G+   + G+   + GS K   +  SL  +
Sbjct: 60  HCYFDIKDASASMAAIVWKGIYLASGVTLHDGMRVQITGRYDVYKGSGKLSFVATSLTVA 119

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171
           G G L   + +  KKL  EGL  +  K PIP     I V+TS +G+VI D+ + ++ R  
Sbjct: 120 GEGDLRQKVAELAKKLEREGLMREDRKRPIPRFCTRIGVVTSLSGSVIEDVKRTLARRNS 179

Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            + + +    VQG+  P+ I  A+    +         PD I+L RGGGS EDL  FNDE
Sbjct: 180 LVEIEVTGAAVQGEHAPQTIVQALGIAESTH-------PDAILLVRGGGSFEDLMCFNDE 232

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            + RAIA SS+P+I+ IGHE D T+AD  +D R  TPT AAE   P    LQ +  +  +
Sbjct: 233 AVARAIAASSVPVITGIGHEPDVTIADMVSDRRTSTPTAAAESVAPSISELQMAFNDRVS 292

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
           RL                         +  L      +D   R  +  ++  + ++   F
Sbjct: 293 RLAGAT---------------------EALLLGYAQEIDGFSRRADLAIQNSLRQRQIRF 331

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +  R      ++     +  +L+ +Q +   +                          
Sbjct: 332 LALAERKCLSDPLYLFVSRKSDLLQTEQRLHDALPLA----------------------- 368

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
             +      + +   R++   +  +      VS     L++ +    L RGY    +   
Sbjct: 369 --LNRKEQALTQSADRLKTAATRLLAPYEAQVSAAAGKLEALSPLKVLGRGYALATNERG 426

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           + +    +      I +   +G   A V     
Sbjct: 427 HVLKNAHDAQKGEAIRVKLAEGSLVAHVTEIEA 459


>gi|24215056|ref|NP_712537.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|31563144|sp|Q8F3P5|EX7L_LEPIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|24196108|gb|AAN49555.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 422

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 136/495 (27%), Positives = 212/495 (42%), Gaps = 79/495 (15%)

Query: 11  DHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           D    SVSE++  +K+++    +L ++ VRGEIS Y    SSGH YFSLKD  S I    
Sbjct: 3   DSKPLSVSEVTRIIKNLISGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDAGSLIRCTF 61

Query: 69  WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +  +       P  +G E  V G IT +     Y + +  +   G G +L  +EK K+KL
Sbjct: 62  FNYSNKNYSGKPLSDGKEIQVYGTITLYEAGGSYNLNVTRVEELGQGDILLQIEKLKQKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EG+F  + K  IP  PK + + TSPTGA I DI++    RFP + ++I P  VQG++ 
Sbjct: 122 AVEGIFDPEKKRRIPSFPKTLGIATSPTGAAIEDIIKISRSRFPGINILIAPCIVQGEDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P  I  AI +LN         + D+II  RGGGS EDL  FNDE +VRA ANS +PIISA
Sbjct: 182 PDSIVAAIEELN-----HPNWKVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRVPIISA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GH+TD  L+D+AAD   PTPT AAE A+P +E +                         
Sbjct: 237 VGHQTDVLLSDFAADHFTPTPTAAAEYAIPKEEDVL------------------------ 272

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                                L +L   ++ +L   I         +  +      +  +
Sbjct: 273 -------------------QFLSQLEGRIKSSLVTKISSNRDRLRLLSGKFIFKEPMQLL 313

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q + E    +++ +                          N++      +++    
Sbjct: 314 NQRSQRVDEIGIRLQKAL-------------------------SNKLNLARVRLERY-QN 347

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + + +          T  ++  +   T+KRGY+ +++ N   I        +  + 
Sbjct: 348 LTSRIQNILFHKKQKAEFWTSKVEDLSPAATMKRGYSILRNENGKIIRSPEETKPEEELQ 407

Query: 487 INFFDGQANAIVINK 501
           +    G    I   K
Sbjct: 408 VLLSGGTMQVIRKGK 422


>gi|322389032|ref|ZP_08062600.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis
           ATCC 903]
 gi|321144255|gb|EFX39665.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis
           ATCC 903]
          Length = 463

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 143/500 (28%), Positives = 228/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W
Sbjct: 19  SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 76

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G      F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL E
Sbjct: 77  AGVYRSFGFELEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 136

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  P+ I VITS +GAVIRDI+  +S RFP + ++++P KVQG+    
Sbjct: 137 EGLFQDRWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGASS 196

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+   I + N           D++I+ RGGGSIEDLW FN+E +VRAI  S IPIIS++G
Sbjct: 197 EVVANIQRANQR------DDLDVLIIGRGGGSIEDLWAFNEEPVVRAIFESRIPIISSVG 250

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +    S +  +   +   +   + Y    L
Sbjct: 251 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 310

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L +       ++       ++D+L   L+  +  +  +       + +R+++   +H 
Sbjct: 311 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMREVYGQGDNQLQGLRHRLEAMSPLHR 370

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ +  + + ++ +                                             
Sbjct: 371 IERYQDRVFQDRRLL--------------------------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +   +K     V   +  L        + RGY  ++  ++  +     +     +
Sbjct: 386 --TSRMEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-QDDQVLDSVAKVKEGDPL 442

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 443 SLIMRDGQLEVEVKHVERKE 462


>gi|218282377|ref|ZP_03488659.1| hypothetical protein EUBIFOR_01241 [Eubacterium biforme DSM 3989]
 gi|218216663|gb|EEC90201.1| hypothetical protein EUBIFOR_01241 [Eubacterium biforme DSM 3989]
          Length = 443

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 111/490 (22%), Positives = 212/490 (43%), Gaps = 63/490 (12%)

Query: 16  SVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           S+S +   +K+I+    +L  + ++GEIS     H SGH YFSLKD    +  +++   +
Sbjct: 8   SISSVIARIKNILTQTMDLDGIWIQGEISNLT-KHRSGHYYFSLKDKSGEMSCVMFSSYV 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +++ F  +EG+  LV G I  +      Q++I  +   G G L    EKRK+ LL+ G F
Sbjct: 67  SRLNFNVQEGMRVLVSGSINVYEQRGSLQLVIRQMKQDGLGDLYLEFEKRKQDLLKAGYF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK   P   + I VIT    A ++D+L  I  R+P ++V ++P  VQG+  PK +  
Sbjct: 127 DANHKKAKPEYIENIGVITGAGTAALQDVLSTIQKRWPMMKVTLYPSLVQGNFAPKSLIQ 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           ++ + +T          D +++ RGGGS EDL+ FND  +++ I N +  I+S +GHE D
Sbjct: 187 SLKKADTFGH-------DALLIVRGGGSFEDLFCFNDVELIKTIYNLNTYIVSGVGHEVD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL D   D R+ TPT AA+     +  + + +   +  L   +  ++    + L     
Sbjct: 240 TTLCDLVCDHRSVTPTAAAQWVTFDQYDVMNKIAKDKELLYRNMSLILNGYKSKLEQYKS 299

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L +    +   + +LD    ++EH L + + +                         
Sbjct: 300 HPYLKDPKAFIVDKQLKLDAYHTQMEHALSLELQK------------------------- 334

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
                            +  I   K +    +  + + +K ++  +   ++         
Sbjct: 335 -----------------MNLIKNYKHQLAFNMSQILKDSKQKLSIIPEKLEV-------S 370

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           + +KI+     +     +L +++    L RGY+  +  +   +   R++ +   ++    
Sbjct: 371 MQNKIQEKRHLLMRDCALLDAYSPLKVLSRGYSISKVED-KVVKSIRDVKSDDIMITRVH 429

Query: 491 DGQANAIVIN 500
           DG   + + +
Sbjct: 430 DGVITSRIAS 439


>gi|332522245|ref|ZP_08398497.1| exodeoxyribonuclease VII, large subunit [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332313509|gb|EGJ26494.1| exodeoxyribonuclease VII, large subunit [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 447

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS+L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW G 
Sbjct: 5   LSVSQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATIWGGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  ++G++  +  S  Y IIIE + P G G L    E+ K KL +EG 
Sbjct: 63  YKKLGFDLEEGMKVNIVGRVQLYEPSGSYSIIIEKVEPDGIGALALQFEQLKAKLSKEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+D HK  +P   K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG    +E+ 
Sbjct: 123 FNDNHKQALPQFAKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGSGAAEEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N   +       D++I+ RGGGSIEDLW FN+E++V+AI  S +PIIS++GHET
Sbjct: 183 TNIALANQRTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A PV +    S I+ +          +  +     + L
Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADIISWISEQQNRAYQANLRLFKQKEDRLAKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++D+L  ++ + ++  +    R    + +R++S  ++  + +
Sbjct: 297 SQSVIFRQPERLYDSFLQKIDQLQSQMNYQIKQKLSETQRLEVSLRHRLQSLDILAKLSR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +    Q ++  +++   Y                                      
Sbjct: 357 YQEKVNYLDQWLQINMQKRYDYSL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L +   +  + RGY  ++  +   I+   N+A    + + 
Sbjct: 381 -----------ARFEKAQDTLLALDTERIIARGYGILR-KDEEVISSVANIAIGDALDLE 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 LQDGQIEVEVKNVK 442


>gi|50914599|ref|YP_060571.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10394]
 gi|306827050|ref|ZP_07460348.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes ATCC
           10782]
 gi|50903673|gb|AAT87388.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10394]
 gi|304430796|gb|EFM33807.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes ATCC
           10782]
          Length = 451

 Score =  306 bits (784), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 141/494 (28%), Positives = 224/494 (45%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 68  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 362 YQDRVATAKRLLMANM-------------------------------------------- 377

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              + +  S           L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 378 ---ARQYDSQLARFEKAQDALLSLDVSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 434 MRDGQLDVEVKDVK 447


>gi|225174883|ref|ZP_03728880.1| exodeoxyribonuclease VII, large subunit [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169523|gb|EEG78320.1| exodeoxyribonuclease VII, large subunit [Dethiobacter alkaliphilus
           AHT 1]
          Length = 407

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 127/390 (32%), Positives = 222/390 (56%), Gaps = 12/390 (3%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +V++L+ ++K++   +S L+ + V GEIS ++  HSSGH YF+LKD  + +  ++++ 
Sbjct: 8   PVTVAQLTQYIKNLFAADSQLNSLRVSGEISNFKH-HSSGHMYFTLKDAKASLRCVMFRS 66

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F P +G+  +V G+I+ +    +YQ+ +E+++P G G+L  A E  KK+L  EG
Sbjct: 67  YNARLTFKPTQGMNVVVSGRISVYERDGQYQMYVENMLPEGVGSLFAAFEALKKRLAAEG 126

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ + K  +P +P  I V+TSPTGA IRDIL  +  RFP   V++ PV VQG + P++I
Sbjct: 127 LFAPEKKKQLPKLPTRIGVVTSPTGAAIRDILTTLKRRFPQAEVLVMPVLVQGPDAPEQI 186

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI  LN           D++I+ RGGG+IE+LW FN+E++ RA+  S IP++SA+GHE
Sbjct: 187 AEAIEFLN------NIDDVDVMIIGRGGGAIEELWAFNEEVVARAVYASDIPVVSAVGHE 240

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS- 309
           TD+T+AD+ AD+RA TPT AAE+ VP +  +   L + + R+   +   +++    L   
Sbjct: 241 TDFTIADFVADVRAATPTAAAEIVVPDQREIMQYLDSAKQRMAAKLAAKLEHDRRYLERL 300

Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              + L    + L      LD L   LE  ++ ++       + +  ++ +      + +
Sbjct: 301 ASSRVLTRPLERLEQYSQVLDNLSARLETRMQYLLQGCQSRVSVLEGKLTALSPEAVLAR 360

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
                L+++ ++ +      R   L+ + +
Sbjct: 361 GFAICLDEKGNVVRDAALLNRDDLLKLRLQ 390



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 50/141 (35%), Gaps = 2/141 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++  Q++   +Q +   +   L +     +   +    +  +   R+      +  L  R
Sbjct: 269 REIMQYLDSAKQRMAAKLAAKLEHDRRYLERLASS--RVLTRPLERLEQYSQVLDNLSAR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +E  + + ++ C + VS+    L + + +  L RG+    D   N +     L     + 
Sbjct: 327 LETRMQYLLQGCQSRVSVLEGKLTALSPEAVLARGFAICLDEKGNVVRDAALLNRDDLLK 386

Query: 487 INFFDGQANAIVINKAPPKEQ 507
           +    G   A V      + +
Sbjct: 387 LRLQRGTVTARVEETDTEEVK 407


>gi|294054639|ref|YP_003548297.1| exodeoxyribonuclease VII, large subunit [Coraliomargarita
           akajimensis DSM 45221]
 gi|293613972|gb|ADE54127.1| exodeoxyribonuclease VII, large subunit [Coraliomargarita
           akajimensis DSM 45221]
          Length = 451

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 143/490 (29%), Positives = 215/490 (43%), Gaps = 56/490 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
                   V++L+  +K  +E       VRGE+S  R   SSGH YFSLKD+ S++  ++
Sbjct: 8   PEPSEVLKVTDLTRQIKRQLEGRFRQFWVRGEVSNLR-KQSSGHVYFSLKDSGSQLPCVL 66

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +     +  F   EG+E ++ G ++ +    +YQ I +  I SG G L    E+ K+KL 
Sbjct: 67  FARDAARQSFELREGMELVLFGDVSVYEPHGRYQFIAKIAIESGEGQLQLEFERLKRKLA 126

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
            EGLF    K P+P +P  IAVITSPTGA +RD L+ +  R +   V+I P +VQG+  P
Sbjct: 127 GEGLFDRGTKRPLPLLPLRIAVITSPTGAAVRDFLRILKRRHYHGTVVILPARVQGEAAP 186

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
                A L+        + P  D+I+L RGGGSIEDLW FN E + R IA   IP+ISA+
Sbjct: 187 -----AELRQMLQVASASQPAFDLIVLTRGGGSIEDLWAFNHEQLARDIATCPIPVISAV 241

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D  L DY AD RA TP+GAAE    +       +  +E  L +   R ++     L
Sbjct: 242 GHEIDHVLTDYVADERAETPSGAAERISSIYLDCVQRVEAIEYSLTDSTTRSLEIVEREL 301

Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +L   L      + +     +LD     +  +L   + R+     ++  ++        
Sbjct: 302 INLDARLQIIAPARQIQLRSMQLDDQAHRMSTSLRQRLSREKDQLANLGRQLAQHHPATR 361

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
            +  RQ +   Q  + Q V                            +      I  L  
Sbjct: 362 TELARQQLKNLQHRLRQGVGTP-------------------------LARKSDRISHLAK 396

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+E                          + TLKRGY+ I + + + I  +  L     +
Sbjct: 397 RLENG----------------------NLQATLKRGYSLISNKDGDIIDSRAKLPDNEAV 434

Query: 486 LINFFDGQAN 495
            + F DG+A 
Sbjct: 435 TVRFHDGKAK 444


>gi|312864856|ref|ZP_07725087.1| exodeoxyribonuclease VII, large subunit [Streptococcus downei
           F0415]
 gi|311099983|gb|EFQ58196.1| exodeoxyribonuclease VII, large subunit [Streptococcus downei
           F0415]
          Length = 447

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 151/497 (30%), Positives = 234/497 (47%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW G 
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATIWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  +  Y IIIE   P G G L    E+ KKKL + G 
Sbjct: 63  FRKLGFELEEGMKINVVGRVQLYEPNGSYSIIIERAEPDGIGALAVQFEQLKKKLTQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+ +HK  +P   K I V+TS +GAVIRDI+  +S RFP + +++FP KVQG+   + +A
Sbjct: 123 FAAEHKQALPQFVKKIGVVTSSSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGSAQAVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I Q N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ENIAQANQRED------LDLLIIGRGGGSIEDLWAFNEEVVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLADY AD RA TPT AAE+A PV K  + + L     R      R I  +   L   
Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADILAWLREAGQRAYQATNRRIGQEGERLAKW 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LDRL  +L   +   + +  +    +  R+ S  L   +Q 
Sbjct: 297 SQSVIFRQPERLYDGHAQKLDRLTDDLSKQMRYRLSQAQQDQGLLSQRLASIDLQGRLQL 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ + ++++ ++  +                                            
Sbjct: 357 VKERLSQQERLLKANM-------------------------------------------- 372

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              +++  S           L S      + RGY  +Q  +   IT   +L    ++ + 
Sbjct: 373 ---ANQYDSRLARFEKAQDALLSLDTSRIVARGYAIVQ-KDKKPITSVTDLKQGDQLTLQ 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ    V N    K
Sbjct: 429 MKDGQVEVEVENAKQEK 445


>gi|322412222|gb|EFY03130.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 446

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 139/494 (28%), Positives = 220/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK  +P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQSLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIMVQAIFESKLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTELMSWIVERQNRSYQACLRQIKQRQEWVDKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANMTNQYDSQL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDTGRIIARGYALIE-KNQELVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|323127696|gb|ADX24993.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 446

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 138/494 (27%), Positives = 220/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK  +P     I VITSP+GAVIRD +  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQLLPQFVSKIGVITSPSGAVIRDFITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESKLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +     + L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVAKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANMTNQYDSQL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|83319530|ref|YP_424053.1| exodeoxyribonuclease VII, large subunit [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
 gi|83283416|gb|ABC01348.1| exodeoxyribonuclease VII, large subunit [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
          Length = 468

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 127/494 (25%), Positives = 222/494 (44%), Gaps = 37/494 (7%)

Query: 14  EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV EL+  LK  +E      ++ V+GE+S       SGH YFS+KD ++ I+ ++WK 
Sbjct: 4   ILSVQELNESLKTFIEEPDYFKNIYVKGELSNLTFN-KSGHVYFSIKDQNAAINCMMWKS 62

Query: 72  TLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
              K+     E+G++ +  G++T +  + +     + +   G G L    E+R K L + 
Sbjct: 63  NTQKLASLNLEDGMQIICHGRLTYYIPTGRVSFEAKDIQIYGIGDLQKIYEQRYKDLKQA 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G F    K P+P   K + +IT+ +GA I D++  I  R P + + +FP +VQG +   +
Sbjct: 123 GWFDQNLKKPLPEFIKNVGIITASSGAAIHDLITTIHRRLPLINIYLFPAQVQGAQSEID 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IAN I Q N  K      + D++I+ RGGGS EDLW FN+ ++++AI +S IPIISA+GH
Sbjct: 183 IANKIKQANDFKI-----KLDVLIVGRGGGSYEDLWAFNELVLLQAIKDSKIPIISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LN 308
           E D  L+D+ AD+RA TPT A E+       +++ L +       +I   +K       N
Sbjct: 238 EPDVVLSDFVADIRAATPTAAGELVSKDINEIKNKLKHYYQTNKTLISNKLKLTNQELTN 297

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                +   +  LS     L +L     + ++  I       +   + I           
Sbjct: 298 FKENQIKFINNYLSNQYLELKQLSAYNPNLVKNKINSLIDKLDDNKHFIF---------- 347

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
                           +   + I L+ KE     ++ +++  + +    T     I+  +
Sbjct: 348 ----------------ESIKKIIILQNKEINNHSNINKQKISDFLKKQITDFNFAISSFK 391

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            ++S KIK    S +   + +        L+ G++ I + NN  IT  + +     + + 
Sbjct: 392 GLISQKIKFEELSFASLEKQVGLLNPLKPLENGFSIITNLNNKKITSYKQVKINEDLKVF 451

Query: 489 FFDGQANAIVINKA 502
             D +    +    
Sbjct: 452 LSDSKLVVTIKEVK 465


>gi|259046626|ref|ZP_05737027.1| exodeoxyribonuclease VII, large subunit [Granulicatella adiacens
           ATCC 49175]
 gi|259036791|gb|EEW38046.1| exodeoxyribonuclease VII, large subunit [Granulicatella adiacens
           ATCC 49175]
          Length = 444

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 152/501 (30%), Positives = 238/501 (47%), Gaps = 63/501 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    +VS L+ ++K   + +  L  V + GEIS +    +S H YF+LKD ++ I A 
Sbjct: 1   MEQEYLTVSALTKYIKTKFDRDPHLDRVYLTGEISNFNK--NSVHKYFNLKDENAIIAAT 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G   KI+F PEEG++ LVIG++T +  S KYQ+IIE + P G G L  A E+ KKKL
Sbjct: 59  MFQGAYKKIQFQPEEGMKVLVIGRVTVYEKSGKYQMIIEHMEPDGVGALYQAYEQLKKKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            EEG+FS   K PIP  PK IA++TS TGAVIRDI   ++ RFP+ +++++P  VQG   
Sbjct: 119 TEEGVFSGPKK-PIPVFPKKIAILTSDTGAVIRDIQTTVARRFPIAQLVLYPTVVQGVHA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   +  +            D++I+ RGGGSIEDLW FN+E +VR +A+ S+PIIS+
Sbjct: 178 VPSILKNLDLV-------EQSDADVVIIGRGGGSIEDLWAFNEEPVVRRVASFSLPIISS 230

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D+AAD RA TPT AAE+A PV   +  +L NL  RL   ++  +  +   
Sbjct: 231 VGHETDTTLTDFAADQRAATPTAAAELATPVLNDIHLTLGNLTGRLQTTMLNQLNTRKEL 290

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+ L K       ++       ++D+L  +L   ++  +    +      +R++      
Sbjct: 291 LSKLEKSGIFVKPERMYEVYAQQVDQLRLKLMQGMQQRLHLAKQQSMQFTHRLQLLSPEQ 350

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + + +Q +   Q+ +                                +     +++   
Sbjct: 351 LLIQQKQKLEWLQKQL--------------------------------LDSNQNYLQDKQ 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R                      L   +    + RGY  +       +     +     
Sbjct: 379 IRFHQ---------------LVEKLDLLSPLKIMTRGYGIVF-KKGTIVNSVEQIENNEE 422

Query: 485 ILINFFDGQANAIVINKAPPK 505
           I I   DG  NA V  K    
Sbjct: 423 IEIRLSDGLVNATVNEKNKES 443


>gi|19746454|ref|NP_607590.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS8232]
 gi|139473475|ref|YP_001128191.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes str.
           Manfredo]
 gi|23814088|sp|Q8P075|EX7L_STRP8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|73919347|sp|Q5XB25|EX7L_STRP6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158512777|sp|A2RDN0|EX7L_STRPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|19748656|gb|AAL98089.1| putative exodeoxyribonuclease VII (large subunit) [Streptococcus
           pyogenes MGAS8232]
 gi|134271722|emb|CAM29955.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pyogenes str. Manfredo]
          Length = 446

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 141/494 (28%), Positives = 224/494 (45%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANM-------------------------------------------- 372

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              + +  S           L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 373 ---ARQYDSQLARFEKAQDALLSLDVSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|91776215|ref|YP_545971.1| exodeoxyribonuclease VII large subunit [Methylobacillus flagellatus
           KT]
 gi|91710202|gb|ABE50130.1| Exodeoxyribonuclease VII large subunit [Methylobacillus flagellatus
           KT]
          Length = 398

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 126/370 (34%), Positives = 202/370 (54%), Gaps = 8/370 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+   + ++E++     + GEIS      +SGH YFSLKD  +++  ++++   
Sbjct: 7   ILSVSELNRMARELLETSFPLFWISGEISNLT-RAASGHWYFSLKDQGAQVRCVMFRSRN 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             +++ P EG +      +T +     +Q+ IE L  +G G L  A EK K +L  EGLF
Sbjct: 66  AYLDWSPREGDKVEARAVVTLYEARGDFQLTIEFLQRAGLGNLFEAYEKLKNQLAAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + +HK  IP  P+ I ++TSP  A +RD+L  +  R P + VII+P  VQG    K IA+
Sbjct: 126 AAEHKIAIPAHPRQIGIVTSPDAAALRDVLTTLRRRMPAVNVIIYPTPVQGKGAAKLIAD 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGSIEDLW FN+E++ RAI   ++P+ISA+GHETD
Sbjct: 186 AIRTADQRAE------CDVLIVCRGGGSIEDLWQFNEEIVARAIHVCTLPVISAVGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD+RAPTPT AAE+  P +  L ++L+    RL   +  L++ +   L+ L +
Sbjct: 240 FTIADFVADVRAPTPTAAAELTTPDRSSLLNTLLQHRNRLARSMQNLLQQRSQHLDYLSR 299

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  Q     R  L +L   L   +   + R+++H   +   +        +Q+    
Sbjct: 300 RLLSPMQQAEHKRQHLSQLRLRLTQAMARQLQRQHQHLQAVQQSLAHLNPRAVLQRGYAL 359

Query: 373 ILEKQQHIEQ 382
           + +    + Q
Sbjct: 360 VEKLNGELVQ 369



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 51/134 (38%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R  +L         + + ++ +  ++ + +  L         +  +   H+ +L  R+  
Sbjct: 265 RSSLLNTLLQHRNRLARSMQNLLQQRSQHLDYLSRRLLSPMQQAEHKRQHLSQLRLRLTQ 324

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            ++ +++  H  +    + L     +  L+RGY  ++  N   +     LA   ++ +  
Sbjct: 325 AMARQLQRQHQHLQAVQQSLAHLNPRAVLQRGYALVEKLNGELVQDSNQLAPGDQVKLTL 384

Query: 490 FDGQANAIVINKAP 503
             G A A + +K  
Sbjct: 385 SKGSAQAEIRDKGT 398


>gi|56808398|ref|ZP_00366150.1| COG1570: Exonuclease VII, large subunit [Streptococcus pyogenes M49
           591]
 gi|94988857|ref|YP_596958.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS9429]
 gi|94992748|ref|YP_600847.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS2096]
 gi|94542365|gb|ABF32414.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS9429]
 gi|94546256|gb|ABF36303.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS2096]
          Length = 451

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 68  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 386 -----------ARFEKAQDALLSLDTSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 434 MRDGQLDVEVKDVK 447


>gi|312867102|ref|ZP_07727312.1| exodeoxyribonuclease VII, large subunit [Streptococcus
           parasanguinis F0405]
 gi|311097231|gb|EFQ55465.1| exodeoxyribonuclease VII, large subunit [Streptococcus
           parasanguinis F0405]
          Length = 446

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 145/500 (29%), Positives = 227/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W
Sbjct: 2   SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G      F  EEG++  VIG+I  +  S  Y I+IE   P G G L    E+ KKKL E
Sbjct: 60  AGVYRSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  P+ I VITS +GAVIRDI+  +S RFP + ++++P KVQG+    
Sbjct: 120 EGLFQDRWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGAAS 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+   I + N           D++I+ RGGGSIEDLW FN+E +VRAI  S IPIIS++G
Sbjct: 180 EVVANIQRANQR------DDMDVLIIGRGGGSIEDLWAFNEEAVVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +    S +  +   +   +   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L +       ++       ++D+L   L+  +     +       + +R+++   +H 
Sbjct: 294 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMRDAYGQGVNQLQGLRHRLEAMSPLHR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ +  +L+ ++ +                                             
Sbjct: 354 IERYQDRLLQDKRILTNR------------------------------------------ 371

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                +   +K     V   +  L        + RGY  ++   +  +     +     +
Sbjct: 372 -----MEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-EGDQVLDSVAKVTEGDPL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 SLIMRDGQLEVEVKHVERKE 445


>gi|83749053|ref|ZP_00946059.1| Exodeoxyribonuclease VII large subunit [Ralstonia solanacearum
           UW551]
 gi|83724243|gb|EAP71415.1| Exodeoxyribonuclease VII large subunit [Ralstonia solanacearum
           UW551]
          Length = 480

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 133/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 41  VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 99

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 100 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 159

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 160 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 219

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD
Sbjct: 220 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 273

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +  +  T++ L +
Sbjct: 274 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 333

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R RL  L   L   L   + R       +  R+ +     +  + R  
Sbjct: 334 RLRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTARERTA 391

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +  + + ++  L         + A L +L                           
Sbjct: 392 LQGIEAALARAMRTTLDRAQTRLSHRQAGLELL------------------------APQ 427

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             ++                        GY  + D +   I     L  + RI      G
Sbjct: 428 RTLER-----------------------GYAVLLDADGRAIRDPNALHARARIEARLALG 464

Query: 493 QANAIVINKAPP 504
             +  +    P 
Sbjct: 465 AVDIEIAQAQPK 476


>gi|294496440|ref|YP_003542933.1| exodeoxyribonuclease VII large subunit [Methanohalophilus mahii DSM
           5219]
 gi|292667439|gb|ADE37288.1| exodeoxyribonuclease VII, large subunit [Methanohalophilus mahii
           DSM 5219]
          Length = 399

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 127/359 (35%), Positives = 202/359 (56%), Gaps = 12/359 (3%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V+ L+ ++K+++  E  L H+ V GEIS     H SGH YFS+KD  S++  + ++ 
Sbjct: 3   IYTVTGLNKYIKNVLTSEMALQHIWVEGEISNLT-KHRSGHYYFSIKDGSSQLSCVSFRS 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           T  K++F PE+ ++ LV G +  +    +YQ+ +  + P G G L  A E+ KK+L  EG
Sbjct: 62  TNRKLKFEPEKDMKVLVFGSVNVYTVRGQYQLQVLDIRPDGVGELYKAFEQLKKRLEAEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+ +HK P+P  P+ I V TS TGA I DIL  +  R+P+ +++ P  VQG+     I 
Sbjct: 122 LFAPEHKRPLPRYPRKIGVATSATGAAIHDILHVLQRRYPVDILLCPTIVQGETSADSII 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            ++  LN           D+II  RGGGS EDLW FN+E + RAI NS +P+I+AIGHET
Sbjct: 182 RSLELLNR-------TDADLIITGRGGGSFEDLWSFNEEKVARAIYNSRLPVIAAIGHET 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T++D+AAD+RAPTP+ AAE+AVP +  +   +  L  R+ + +   I+ +   L  L 
Sbjct: 235 DFTISDFAADVRAPTPSAAAEIAVPDRTEMARHIDVLRQRMESALKTQIQNQKKHLEYLS 294

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             +      + L+     LD +   L    E ++  K      +  R+ +   ++  ++
Sbjct: 295 GRISPDRYRELLNQRTQHLDEVTYRLASRTEYMMQTKVAELGALAGRLNAVSPLNTFER 353



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +HI   +Q +E  +K  ++      +     +   R +    +     H+ ++  R+   
Sbjct: 266 RHIDVLRQRMESALKTQIQNQKKHLEYLSGRISPDRYR--ELLNQRTQHLDEVTYRLASR 323

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
             + +++    +      L + +  NT +RGY   Q      IT   ++     + + F 
Sbjct: 324 TEYMMQTKVAELGALAGRLNAVSPLNTFERGYCVAQSDQGGTITGVIDIEKGQSLQLKFR 383

Query: 491 DG 492
           DG
Sbjct: 384 DG 385


>gi|207742511|ref|YP_002258903.1| exodeoxyribonuclease vII large subunit (exonuclease vII large
           subunit) protein [Ralstonia solanacearum IPO1609]
 gi|206593903|emb|CAQ60830.1| probable exodeoxyribonuclease vII large subunit (exonuclease vII
           large subunit) protein [Ralstonia solanacearum IPO1609]
          Length = 487

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 133/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 48  VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 106

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 107 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 166

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 167 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 226

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD
Sbjct: 227 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 280

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +  +  T++ L +
Sbjct: 281 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 340

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +    +   R RL  L   L   L   + R       +  R+ +     +  + R  
Sbjct: 341 RLRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTARERTA 398

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +  + + ++  L         + A L +L                           
Sbjct: 399 LQGIEAALARAMRTTLDRAQTRLSHRQAGLELL------------------------APQ 434

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             ++                        GY  + D +   I     L  + RI      G
Sbjct: 435 RTLER-----------------------GYAVLLDADGRAIRDPNALHARARIEARLALG 471

Query: 493 QANAIVINKAPP 504
             +  +    P 
Sbjct: 472 AVDIEIAQAQPK 483


>gi|121604828|ref|YP_982157.1| exodeoxyribonuclease VII large subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120593797|gb|ABM37236.1| Exodeoxyribonuclease VII large subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 439

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 117/487 (24%), Positives = 208/487 (42%), Gaps = 75/487 (15%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V  L   +   +E+  + V V+GE++G+    +SGH YFSLKD   +I   +++   
Sbjct: 22  VWPVGSLLRAIADSLEARFNPVAVQGELAGF-SRAASGHCYFSLKDGQGQIRCAMFRRAA 80

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + ++F P +G    + G++  +    + Q+++ES+  +G GTL     + K +L +EGLF
Sbjct: 81  SLLDFSPRDGQLVELRGRLGVYEPRGELQLVVESMQQAGQGTLFEQFLQLKARLEQEGLF 140

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P +P+ I V+TS   A + D++  +  R P + V+I+P  VQG +   E+  
Sbjct: 141 DTARKRPLPVMPRAIGVVTSLGAAALHDVVTALQRRAPHIPVVIYPASVQGAQAAGELRG 200

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+L+     E R   + D+++L RGGG++EDLW FNDE + RAI  S +P++  +GHETD
Sbjct: 201 AVLKA---GERRGTDQVDVLLLVRGGGAMEDLWAFNDEALARAIVASPMPVVCGVGHETD 257

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD+RAPTPT AAE+                                       
Sbjct: 258 FTIADFCADMRAPTPTAAAELCAQP----------------------------------- 282

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                   LS       RL   ++  ++    R     + +          H + + +  
Sbjct: 283 ----QGSWLSALDQVFSRLQNGVDRQMQSHNQRLDWAASRVSQ------PSHLVTRQQAR 332

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +    Q +   +                         ++ +      ++ L + +   ++
Sbjct: 333 LAGIAQSLNHAM-------------------------RSTLRREQLRLQALSSDLPREIT 367

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             ++     +      L+    K  L+RGY  + D     IT          +     DG
Sbjct: 368 GSLQRSRHQLERAKLRLELLDPKLVLQRGYAWLADLQGQPITAANMTHIGQPVRATLADG 427

Query: 493 QANAIVI 499
           Q +  V 
Sbjct: 428 QVDLTVS 434


>gi|71903834|ref|YP_280637.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS6180]
 gi|71802929|gb|AAX72282.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS6180]
          Length = 451

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 68  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHSLANSQLQTKIER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 434 MRDGQLDVEVKDVK 447


>gi|94994736|ref|YP_602834.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10750]
 gi|94548244|gb|ABF38290.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10750]
          Length = 451

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 68  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 434 MRDGQLDVEVKDVK 447


>gi|283850296|ref|ZP_06367585.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. FW1012B]
 gi|283574322|gb|EFC22293.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. FW1012B]
          Length = 473

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 123/523 (23%), Positives = 208/523 (39%), Gaps = 78/523 (14%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + VSEL+  +K +VES    V VRG++        SGH YFSLKD  + +  + ++G  
Sbjct: 4   VFEVSELTRSIKDVVESEFPFVWVRGQVVNL-SRPGSGHLYFSLKDAEASLAVVWFRGAQ 62

Query: 74  --------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
                                 +     +G+E +  G++T +P    YQ++ E +   G+
Sbjct: 63  GGKALAGGGRYDPLTGEVYEASLAEGLADGMEVMAAGRLTVYPPRGAYQLVAEVVQEVGA 122

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPL 172
           G L    E  KK L   G F    K P+P  P  +AV+T+PTGA +RD ++    R    
Sbjct: 123 GRLWLEFEALKKDLAARGYFDPARKRPLPRHPLRVAVVTAPTGAAVRDFIRIGRERGHGA 182

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
            V I+P  VQGD  P  I  A+++             ++++L RGGGS+EDLW FN   +
Sbjct: 183 AVRIYPTLVQGDAAPTGIVRAMMRAVADDWA------EVLVLVRGGGSLEDLWAFNSVEV 236

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
             AI  S +P+++ +GHE D T+AD  AD+RA TP+ AA++  P +E L   L +LE  L
Sbjct: 237 AGAIFASPLPVLTGVGHEVDVTIADMVADVRAATPSHAAQLLWPEREQLAQRLDDLEMAL 296

Query: 293 NNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                +L+  +   +  L + L   + ++ L+            LE   E       R  
Sbjct: 297 GRAAEKLVASREREVAVLARGLAWLSPERRLARLEEAFAGAEARLERAAEHWTAGLARRV 356

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +   + + F    +   +Q +  +Q  +E   + +                       
Sbjct: 357 EGLSESVAAAFGPKALDARQQALARRQDALEAARRWY----------------------- 393

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN- 469
                                   +      + +    L        L RGY+       
Sbjct: 394 ------------------------LVDRERRLELAGARLAGLDPLGPLARGYSLATVART 429

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512
             F+ ++ ++    ++ I  ++G+  A V            + 
Sbjct: 430 GKFLRREADVRPGDKLDIMVYEGRVRATVDTPEGADAPKGGER 472


>gi|209559668|ref|YP_002286140.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           NZ131]
 gi|226697616|sp|B5XM83|EX7L_STRPZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|209540869|gb|ACI61445.1| Probable exodeoxyribonuclease VII large subunit [Streptococcus
           pyogenes NZ131]
          Length = 446

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|303239903|ref|ZP_07326426.1| exodeoxyribonuclease VII, large subunit [Acetivibrio cellulolyticus
           CD2]
 gi|302592613|gb|EFL62338.1| exodeoxyribonuclease VII, large subunit [Acetivibrio cellulolyticus
           CD2]
          Length = 409

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/362 (38%), Positives = 218/362 (60%), Gaps = 12/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS ++ ++K I+  +  LS++ VRGE+S ++  HSSGH YF+LKD +S I  +++
Sbjct: 10  ENILSVSLVNRYIKEIISRDMILSNLWVRGEVSNFKN-HSSGHMYFTLKDENSLIKCVMF 68

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +   + ++F+PE G++ ++ G ++ F    +YQ+  E +I  G G L  A E+ KK+L E
Sbjct: 69  RTQNSYLKFMPENGMKVIIRGYVSLFERDGQYQLYAEEMISDGVGNLHIAFEQLKKRLSE 128

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EGLF +  K  IPF+P  I V+TS TGAVIRDI+  +  RF    + IFPVKVQG    K
Sbjct: 129 EGLFDNSFKKRIPFMPGSIGVVTSSTGAVIRDIINVLDRRFYNANIKIFPVKVQGAGAAK 188

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI+ AI +LN LK        D+II+ARGGGS+E+LW FN+E++ R+I NS IP+ISA+G
Sbjct: 189 EISRAINKLNELKC------VDVIIVARGGGSLEELWPFNEEIVARSIFNSKIPVISAVG 242

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H+TD+T+ D+ AD+RAPTP+ AAE+ +P K  L + +  LE R  + ++R +K K   L+
Sbjct: 243 HDTDYTICDFVADVRAPTPSAAAEIVMPEKHMLVNRISELEIRFRSALLRNVKIKRKRLD 302

Query: 309 --SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                         +   R +LD L ++L+    +   R       +I ++ +   +  +
Sbjct: 303 ELKNAAVFRQPYDRVYQERMKLDILNKDLKKAFLVKKERSRSRLQFLIGKLDALSPLTIL 362

Query: 367 QK 368
            +
Sbjct: 363 SR 364



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 51/137 (37%), Gaps = 3/137 (2%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM--LREQTKNRIFYLHTHIKKLITR 426
            +  ++ +   +E   +  L      K++++  L    +  Q  +R++     +  L   
Sbjct: 271 EKHMLVNRISELEIRFRSALLRNVKIKRKRLDELKNAAVFRQPYDRVYQERMKLDILNKD 330

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRI 485
           ++     K +   + +      L + +    L RGY+ ++  ++   +    ++    +I
Sbjct: 331 LKKAFLVKKERSRSRLQFLIGKLDALSPLTILSRGYSIVKAADDKHVVKSINDVRAGEQI 390

Query: 486 LINFFDGQANAIVINKA 502
            +N  DG     V +  
Sbjct: 391 EVNLEDGNLECTVNSVK 407


>gi|253998648|ref|YP_003050711.1| exodeoxyribonuclease VII large subunit [Methylovorus sp. SIP3-4]
 gi|253985327|gb|ACT50184.1| exodeoxyribonuclease VII, large subunit [Methylovorus sp. SIP3-4]
          Length = 400

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 8/356 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V+EL+   +  +E       V GEIS      +SGH YFSLKD  +++  ++++G  
Sbjct: 8   ILTVTELNRLARDTLERAFPLFWVSGEISNLT-RAASGHWYFSLKDAGAQVRCVMFRGRN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + +++ P EG +      +T +     +Q+ IE L  +G GTL  A EK K KL  EGLF
Sbjct: 67  SYLDWQPREGDKVEARALVTLYEARGDFQLTIEFLQRAGLGTLFEAFEKLKAKLQAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K PIP  P+ I ++TSP  A +RD+L  +  R P L VII+P  VQG     +IA 
Sbjct: 127 DAALKRPIPAHPQRIGIVTSPDAAALRDVLSTLRRRMPSLEVIIYPTPVQGKGAATQIAA 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGS+EDLW FN+E++ RAI   S+P+IS +GHETD
Sbjct: 187 AIETASARAE------VDVLIVCRGGGSMEDLWQFNEEIVARAIHGCSMPVISGVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+AAD+RA TPT AAE+    ++ L  +   L  RL+  + +L+  ++  ++ L +
Sbjct: 241 FTIADFAADVRAATPTAAAELVSADRQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTR 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L +  Q ++   ++L +    L+  +   + R+ R    +   +        + +
Sbjct: 301 RLLSPSQQIAHRGHQLQQWQWRLQQAMRQKLDRQTRQLQTLQQNLVHLNPQAILSR 356



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 50/134 (37%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           RQ +L+ Q  + + + + ++ +  ++ + +  L         +I +    +++   R++ 
Sbjct: 266 RQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTRRLLSPSQQIAHRGHQLQQWQWRLQQ 325

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  K+      +    + L     +  L RGYT     + + +   + L     I +  
Sbjct: 326 AMRQKLDRQTRQLQTLQQNLVHLNPQAILSRGYTLAYAEDGSLLKSVQTLQKGKGITLQL 385

Query: 490 FDGQANAIVINKAP 503
            DG     V    P
Sbjct: 386 TDGLVKTTVDQVHP 399


>gi|296272228|ref|YP_003654859.1| exodeoxyribonuclease VII large subunit [Arcobacter nitrofigilis DSM
           7299]
 gi|296096403|gb|ADG92353.1| exodeoxyribonuclease VII, large subunit [Arcobacter nitrofigilis
           DSM 7299]
          Length = 395

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 132/366 (36%), Positives = 204/366 (55%), Gaps = 11/366 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS L+  +K ++E+    V V+GEIS     HSSGH YFS+KD +S I  ++++G    
Sbjct: 6   SVSTLNNQIKSLLETTFIGVYVQGEISNLT-YHSSGHIYFSIKDENSTISCVMFRGNAQY 64

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F  E G++ ++ G IT +     YQ++   + P G G+L  A E+ K+KL +EGLF  
Sbjct: 65  LKFKLEVGMKIIISGSITAYIPRGNYQLMCTKIDPDGQGSLALAFEQLKEKLQKEGLFDL 124

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K  +P  PK IA++TSPTGA I D+ +    R+P + +I+ P  VQG+    +I N+I
Sbjct: 125 SIKKTLPKYPKNIALVTSPTGAAIEDMKKVAQNRWPLINLILIPTLVQGEGSKFDIVNSI 184

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            + ++L         D+II+ RGGGSIEDLW FN+E++ RAI  +  PIISA+GHE D+ 
Sbjct: 185 KKADSL-------NYDVIIVGRGGGSIEDLWAFNEEVVARAIYEARTPIISAVGHEVDFL 237

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ AD+RA TP+ A E+A+P K      L NL+    N   R++  K   L +  K  
Sbjct: 238 ISDFVADVRAATPSNAMEIALPDKNEHLQYLDNLQVEFENRFKRVLYNKEQVLLNYRKYF 297

Query: 315 PN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                D+  S  +  +D L     + L  I+ +K    N++ N  +S+     I+     
Sbjct: 298 EQHSLDKKFSFIQKEIDYLKSNFSNTLSQILRQKQNELNYLKNAYESNHPDKKIKDGYVQ 357

Query: 373 ILEKQQ 378
           I +  Q
Sbjct: 358 ISKNNQ 363


>gi|251782892|ref|YP_002997195.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391522|dbj|BAH81981.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 446

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 139/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK  +P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQLLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESKLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +     + L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVAKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|220931493|ref|YP_002508401.1| exodeoxyribonuclease VII, large subunit [Halothermothrix orenii H
           168]
 gi|254783702|sp|B8D2H9|EX7L_HALOH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|219992803|gb|ACL69406.1| exodeoxyribonuclease VII, large subunit [Halothermothrix orenii H
           168]
          Length = 405

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 142/364 (39%), Positives = 218/364 (59%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   Y+VSE++  +  ++  +S L+ + + GEIS +   H+SGH YF++KD  S I +I
Sbjct: 1   MESKIYTVSEVTGRITELLTSDSVLNDLWITGEISNF-HHHNSGHMYFTIKDERSCIKSI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++G   K++F PE+G++    G +  +     YQ  ++ L P+G G L  A E+ K+KL
Sbjct: 60  MFRGYNRKLKFEPEDGLKVNAHGYVGVYKPRGDYQFYVDHLEPAGKGALYLAFEQLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            +EGLF++ HK  IP +P+ I V+TSPTGA IRDIL  +  RF  + V+I P  VQG + 
Sbjct: 120 EKEGLFNEDHKKEIPLLPRKIGVVTSPTGAAIRDILSVVKRRFKNVSVLIVPSLVQGKKA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            +EI   I  LN+          D+II++RGGGSIE+LW FN+E++ RAI NS IP+IS 
Sbjct: 180 AREIVEGIEYLNSR------DDIDVIIVSRGGGSIEELWSFNEEVVARAIYNSRIPVISG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTP+ AAE+A+  +  L+  L+NL  RL N +   IK   + 
Sbjct: 234 VGHETDFTIADFVADLRAPTPSAAAELAISNRIELEKHLVNLYTRLYNSVSYQIKSYRDR 293

Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN  SL K L   ++        +D L R L+  +E  +      F  +  ++ S   + 
Sbjct: 294 LNSLSLKKVLTRPEELFIQKIQYVDELSRRLDWAMEGRLKDAREKFRVLSGKLDSLSPLK 353

Query: 365 NIQK 368
            I++
Sbjct: 354 TIER 357



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 6/161 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +    + +E ++H+  +  +    +  + K     L+
Sbjct: 236 HETDFTIADFVADLRAPTPSAAAELAISNRIELEKHLVNLYTRLYNSVSYQIKSYRDRLN 295

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L       + +        ++ +L  R+++ +  ++K       + +  L S +   T+
Sbjct: 296 SLSLKKVLTRPEELFIQKIQYVDELSRRLDWAMEGRLKDAREKFRVLSGKLDSLSPLKTI 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           +RGY+     +   I     +     I     DG   + V 
Sbjct: 356 ERGYSITLKGS-EPINSITQVDIGDVIRSRLSDGIILSQVK 395


>gi|94990758|ref|YP_598858.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10270]
 gi|94544266|gb|ABF34314.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS10270]
          Length = 451

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LTVTHLTKYLKLKFDHDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 68  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 434 MRDGQLDVEVKDVK 447


>gi|302335599|ref|YP_003800806.1| exodeoxyribonuclease VII, large subunit [Olsenella uli DSM 7084]
 gi|301319439|gb|ADK67926.1| exodeoxyribonuclease VII, large subunit [Olsenella uli DSM 7084]
          Length = 471

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 128/492 (26%), Positives = 211/492 (42%), Gaps = 34/492 (6%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWK 70
               SV E     K  V+  L  + VRGE+SG+RG    SGH YF LKD  S +DAI+W+
Sbjct: 4   SQPLSVREAVDIAKRGVD-ALPALVVRGEVSGFRGPNARSGHCYFQLKDEASSMDAIVWR 62

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G      F  ++G++  + G+   +  S K   +   +  +G G L   + +  ++L  E
Sbjct: 63  GIYQSAGFRLKDGLQVQMDGRFNVYNASGKLSFVARHVELAGEGLLRQQVAELARRLERE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GL  +  K PIP     + V+TS +G+VI D+ + +S R P + +++    VQG   P  
Sbjct: 123 GLMEEGRKRPIPRFCSRVVVVTSLSGSVIEDVKRTLSRRNPLVEILVAGCSVQGSSAPPT 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  A+             RPD I+L RGGGS EDL  FNDE + RA+A S +P+++ IGH
Sbjct: 183 IIRALAM-------AADARPDAILLVRGGGSFEDLMCFNDEALARAVAASPVPVVTGIGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D ++ D  AD R  TPT AAE   P  + ++ S+ + + RL   +             
Sbjct: 236 EPDTSICDMVADRRCSTPTAAAESVAPGIDEIERSINDRQLRLVRAMSS----------- 284

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                      L     RL  L      +LE+ I R+      +  R        + +  
Sbjct: 285 ----------QLEGETQRLGTLGELARRSLEVRISRERLRIEALAQRRCLTDPYASYEDL 334

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
              +   +Q +     + L +     +     LH+   Q   R+ +       L   +  
Sbjct: 335 SAQLELTEQRLRDAPLRSLVHRAQSLESLGQSLHVAGPQAWRRLGFEVERDGAL---LRG 391

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           I +  ++     ++ +   L + +    L RGY+ ++D + + +      +    I +  
Sbjct: 392 IAARMLRPHEADLARSAAALDALSPLRVLARGYSVVRDGSGHVMGDAGGASVGDTIEVTM 451

Query: 490 FDGQANAIVINK 501
             G   A V + 
Sbjct: 452 ARGSLEAEVKDI 463


>gi|15675404|ref|NP_269578.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes M1
           GAS]
 gi|21910692|ref|NP_664960.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS315]
 gi|28895618|ref|NP_801968.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           SSI-1]
 gi|71911046|ref|YP_282596.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS5005]
 gi|54037078|sp|P67453|EX7L_STRP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|54041043|sp|P67452|EX7L_STRP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|13622590|gb|AAK34299.1| putative exodeoxyribonuclease VII (large subunit) [Streptococcus
           pyogenes M1 GAS]
 gi|21904895|gb|AAM79763.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pyogenes MGAS315]
 gi|28810867|dbj|BAC63801.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pyogenes SSI-1]
 gi|71853828|gb|AAZ51851.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes
           MGAS5005]
          Length = 446

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL  EG 
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  +HK P+P     I VITSP+GAVIRDI+  +S RFP + +++FP KVQGD   +E+ 
Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I      +         +       L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL   L + ++  +     +   + + + +  L   I++
Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +   ++ +   +                                            
Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N   +     +    ++ I 
Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428

Query: 489 FFDGQANAIVINKA 502
             DGQ +  V +  
Sbjct: 429 MRDGQLDVEVKDVK 442


>gi|160915118|ref|ZP_02077331.1| hypothetical protein EUBDOL_01126 [Eubacterium dolichum DSM 3991]
 gi|158432917|gb|EDP11206.1| hypothetical protein EUBDOL_01126 [Eubacterium dolichum DSM 3991]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/498 (23%), Positives = 223/498 (44%), Gaps = 63/498 (12%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SV+ L +++K  ++ +  L  + ++GEIS     H SGH YFSLKD  ++I  +++    
Sbjct: 7   SVTSLVHYIKSSLDQDMRLRSLKIKGEISNLT-KHRSGHWYFSLKDTRAKISCVMFASNA 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +     +EG++ +V G ++ +      Q+ + ++   G G L   LE  KKKL  EGLF
Sbjct: 66  ARCTIDVKEGMQVIVSGSVSMYEAGGSLQLYVTAIQNDGLGDLFLQLEAIKKKLAAEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           + + K P+P  P  I ++T+ +GA ++D++  I+ R+P+  V ++P +VQG +  + I  
Sbjct: 126 APERKKPLPLYPMSIGLVTAKSGAALQDMIATIARRWPIANVSLYPAQVQGIQASQSIIT 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            + + + +         D+I+LARGGG+IEDLW FNDE + R IA+    ++S +GHE+D
Sbjct: 186 MLKEADAMGH-------DVILLARGGGAIEDLWCFNDESLARVIADMQTVLVSGVGHESD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311
            TL DY +D RA TPT AAE+  P    ++  L  ++ +L + I   +  +   L  +  
Sbjct: 239 TTLVDYVSDARAATPTAAAELITPDIYEVKQQLAQIQTKLLHKIENQLILQRQHLEHIKA 298

Query: 312 -KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + L +    +   R +L  +  +    ++  +    +  + + N +        +  ++
Sbjct: 299 SRYLQDPLSYIDQERLKLA-MHIKAFGYMQQNLAVTRKQLSKLQNDLAVYSQKMTVSSSQ 357

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
               +K+                                                 +   
Sbjct: 358 HLKEQKRA------------------------------------------------MSLQ 369

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +         ++   + +L +++    L RGY  +   +   I    +L  +  I I   
Sbjct: 370 MEKLYADAQANIIKNSALLDAYSPLKILSRGYQIVYQKD-QVIKSIHDLDLQKMIRIRMQ 428

Query: 491 DGQANAIVINKAPPKEQP 508
           DG A A V+ K   + + 
Sbjct: 429 DGFATASVLEKEEIEWKK 446


>gi|237750917|ref|ZP_04581397.1| exodeoxyribonuclease VII large subunit [Helicobacter bilis ATCC
           43879]
 gi|229373362|gb|EEO23753.1| exodeoxyribonuclease VII large subunit [Helicobacter bilis ATCC
           43879]
          Length = 481

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 131/490 (26%), Positives = 222/490 (45%), Gaps = 21/490 (4%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
              VS+L+  +K ++ES+ S+V V GE+SG+   H+SGH YF+LKD ++ I    ++   
Sbjct: 10  VLQVSQLTMQIKSLLESDFSYVEVEGEVSGFTH-HNSGHIYFNLKDENATISCTFFRHNA 68

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
                  + G + +  G I+ FP    Y + I   + SG G L    E  KK+L E   F
Sbjct: 69  RNNPIKLQNGDKIIAKGNISVFPPRGTYNLNIVKCVHSGIGDLKAQYEALKKRLEERNYF 128

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
                  +P  PK I ++TS T A ++D+++  S R+ L   I+     QG E    IA 
Sbjct: 129 CKNKP--LPRFPKRIILLTSQTSAALQDMIKVASKRYCLCEFILIDTLTQGREAKHSIAK 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +   + L         DI++LARGGGSIEDLW FN+  ++ AI     P++SAIGHE D
Sbjct: 187 NLAYADRL-------GADILVLARGGGSIEDLWSFNEMEVLEAIFACKTPVVSAIGHEID 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+DY AD+RAPTP+ A EM +  K++L + L ++E+ L + +   I  K + LN L +
Sbjct: 240 YLLSDYVADVRAPTPSAAMEMILCDKDNLITQLCDMESMLTHTMQTHITQKKSILNHLAQ 299

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +L   N  Q ++  +  L  L + L+ +++    +K         ++        +   +
Sbjct: 300 SLEILNPLQKIAQHKLLLQTLTQNLQDSIKWFYTQKKHALLQQQEKLDLAKPTQKLLIMK 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             I    + +       +     + K+    L          +  +      L   +   
Sbjct: 360 TEIQSLSKKLHGEFSYIVEQKINQTKQIELELKN------AMLQMMTRKRAMLNFNLNDS 413

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           + + ++     ++    IL +       + G+  I   ++  I Q   L     I I   
Sbjct: 414 MQNALRQKRLMLNNLIDILHALDPSKKAQYGFAQIL-KDDKLI-QVSELQENDVIEIVDS 471

Query: 491 DGQANAIVIN 500
            G  NA ++ 
Sbjct: 472 SGIRNARILG 481


>gi|120602766|ref|YP_967166.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris DP4]
 gi|120562995|gb|ABM28739.1| Exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris DP4]
          Length = 459

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 122/506 (24%), Positives = 208/506 (41%), Gaps = 76/506 (15%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN--- 74
            EL+  ++  +E    +V V+G++S      SSGH YF+LKD  + ++ + ++G+     
Sbjct: 2   RELTRAIRDAIEGGFPYVWVQGQVSNL-SRPSSGHLYFTLKDEEAALNCVWFRGSQRDAE 60

Query: 75  ----------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
                            +      G E L  G++T +     YQ+++E    +G G L  
Sbjct: 61  TFDPLTGEVFEDGPRPGLSRTVRNGQELLCAGRLTVYAPRGGYQLVVEMAQDAGLGRLHL 120

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIF 177
           A E+ K++L  +G F+ + K P+P  P+ +AV+T+P GA I D L+    R     + I 
Sbjct: 121 AFEELKRRLSAKGYFAVERKRPLPRSPRRVAVVTAPRGAAIHDFLRIAGERGVGCEIRIH 180

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV VQG E P            + E       ++I++ RGGGS+EDLW FNDE +   I 
Sbjct: 181 PVPVQGAEAPP------RIAAAIAEAGRLGWAEVIVVIRGGGSLEDLWAFNDEAVADVIY 234

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S +P+++ +GHE D+T+AD  AD+RA TP+ AA++    +      L  LE RL+    
Sbjct: 235 ASPVPVLAGVGHEVDFTMADMTADVRAATPSHAAQLLWRERREFVQGLDELEMRLSRAFD 294

Query: 298 RLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           R        L +L +AL   +  + L     R       L    E     + +    ++ 
Sbjct: 295 RAFTTGEGRLAALERALGWLSPVRALERYDERFAESASRLARAWEAGYRLRSQRVEQLVA 354

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            ++  F    ++K +  +      +                                I  
Sbjct: 355 ALRHSFGPEALEKRQARLQTLHASL--------------------------------IHA 382

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             T +  +  R               V      L +   +  L+RGY+ ++  +  F+  
Sbjct: 383 GQTQLNTVERR---------------VENLGVRLAALDPEAPLQRGYSLVRCPDGRFLKS 427

Query: 476 KRNLATKTRILINFFDGQANAIVINK 501
            R  A   R+ I   DG+   +V + 
Sbjct: 428 IREAAPGQRLDIVLHDGEVGTVVTSV 453


>gi|78357247|ref|YP_388696.1| exodeoxyribonuclease VII large subunit [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78219652|gb|ABB39001.1| Exodeoxyribonuclease VII large subunit [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 486

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 123/527 (23%), Positives = 212/527 (40%), Gaps = 72/527 (13%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              +SV E++  +K+ +E+    V VRG++S      +SGH YFSLKD  + +  + ++ 
Sbjct: 2   TKIFSVGEVTRGIKNTLEAAYPFVWVRGQVSNL-SRPASGHVYFSLKDEDASLACVWFRH 60

Query: 72  TLNK-------------------IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112
                                  +  +   G E L  G++T +     YQ+++E     G
Sbjct: 61  AQRGEETFDPLTGEVFDDGPRPGLAAVMRNGQEMLCAGRVTVYGPRGTYQLVVELAQDVG 120

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-P 171
            G L    E+ KKKL   G F    K P+P  P  +AV+T+ TGA +RD ++  + R   
Sbjct: 121 LGELHLRFEELKKKLAGMGWFDAARKRPLPRHPLRVAVVTAATGAAVRDFVRIAADRGSG 180

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             + I+PV VQGD+ P  IA A+         +      +++L RGGGS+EDLW FNDE 
Sbjct: 181 CSIRIYPVPVQGDDAPPRIAAALELAAAHDWAQ------VVVLIRGGGSLEDLWAFNDER 234

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           + +A+  S +P+++ IGHE D  +AD  AD+RA TP+ AA++  P ++ L   L +    
Sbjct: 235 VAKAVFESPLPVLTGIGHEVDTAIADMVADVRAATPSHAAQLLWPERQELVQRLDDASQL 294

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
           L+      ++ +  ++    +AL                         +  + R    F 
Sbjct: 295 LDRAWELGMQEREKSVKECERALHWLSP--------------------QRSLERLDERFA 334

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
                      +  +    Q + E+++         LR+ F        +L         
Sbjct: 335 EA---------VRRLMAAAQALTERKERRLAAETASLRHAFGPAALDTGLLA-------- 377

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
                   +++L  R+        +     +   T  L++      L+RGY+ +Q  +  
Sbjct: 378 --------VRQLAARLVRAGESFAERAAVRLERETLRLKAADPLLPLERGYSILQRPDGG 429

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
           F+     L     + +   DG A+  V                   K
Sbjct: 430 FVRSVAGLEAGDNLRVLVRDGAADVAVTAVHAVSAAEAAGMPAGGKK 476


>gi|167770738|ref|ZP_02442791.1| hypothetical protein ANACOL_02084 [Anaerotruncus colihominis DSM
           17241]
 gi|167667333|gb|EDS11463.1| hypothetical protein ANACOL_02084 [Anaerotruncus colihominis DSM
           17241]
          Length = 408

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 195/355 (54%), Gaps = 9/355 (2%)

Query: 17  VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           VS+L+ ++K +++S+  L  + VRGEIS +   + SGH YF+LKD  + I  ++++G  +
Sbjct: 9   VSQLNRYVKAMLDSDSALDGLMVRGEISNFLCHYKSGHMYFTLKDETAAIKTVMFRGHAS 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++ F PE G+  +V G ++ +     YQ     + P G G L  A E+ K+KL  EGLF 
Sbjct: 69  QLRFRPENGMSVIVSGSVSLYERDGSYQFYATDMQPDGIGALHLAFEQLKEKLAREGLFD 128

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
           +  K P+P  P+ I V+TS   A  +DIL  +S R+PL  V+++P +VQG+   K IA+ 
Sbjct: 129 EGRKRPLPRYPERIGVVTSEGAAAFQDILNILSRRYPLATVVLYPAQVQGEGAAKTIADG 188

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  LN           D++I+ RGGGS EDLW FNDE + R IA+S IP+ISA+GHE D+
Sbjct: 189 VRALNAAHA------CDVMIVGRGGGSAEDLWAFNDEALARVIASSEIPVISAVGHEVDF 242

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+AD+ AD RAPTP+ AAE+A P    +Q  L +L  R        +      + ++   
Sbjct: 243 TIADFVADRRAPTPSAAAELAAPNIADVQYYLSDLLERCAAQTQGRVASMQLRMRAIQAG 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  S+  L   + R+  L   ++  +E  +        ++    +    +  + +
Sbjct: 303 MAASESVLQSMKQRVKTLGLAVQAAVERRLSGACEQVRYLSALAEERSPMRILSR 357



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 11/122 (9%), Positives = 40/122 (32%), Gaps = 1/122 (0%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           + +      +      + ++  +      +++ +  +   +K L   ++  +  ++    
Sbjct: 277 LLERCAAQTQGRVASMQLRMRAIQAGMAASESVLQSMKQRVKTLGLAVQAAVERRLSGAC 336

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             V   + + +  +    L RGY+         ++    +     +     DG+  + VI
Sbjct: 337 EQVRYLSALAEERSPMRILSRGYSLTSSKRG-PVSSVDQVRVGELLFSRLADGEIISQVI 395

Query: 500 NK 501
             
Sbjct: 396 ET 397


>gi|329117425|ref|ZP_08246142.1| exodeoxyribonuclease VII, large subunit [Streptococcus parauberis
           NCFD 2020]
 gi|326907830|gb|EGE54744.1| exodeoxyribonuclease VII, large subunit [Streptococcus parauberis
           NCFD 2020]
          Length = 442

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 150/494 (30%), Positives = 218/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R      H YFSLKD  + I A +W G 
Sbjct: 5   LSVSNLTKYLKMKFDRDPYLERVYLTGQVSNFRKRPK--HQYFSLKDEGAVIQATMWAGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F  EEG++  V+G+I  +  S  Y IIIE   P G G L    E+ KKKL  EG 
Sbjct: 63  YSKLGFDLEEGMKLNVVGRIQLYEPSGAYSIIIERAEPDGIGALALQFEQLKKKLTSEGF 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +P     + V+TSP+GAVIRDI+  IS RFP + +++FP KVQG+   +E+ 
Sbjct: 123 FDDRHKQALPQFVTKVGVLTSPSGAVIRDIITTISRRFPGVEILLFPTKVQGEGAAQEVV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           + I++ N           D++I+ RGGGSIEDLW FN+E +V AI  S +PIIS++GHET
Sbjct: 183 DNIIRANQR------DDLDLLIVGRGGGSIEDLWAFNEEKVVHAIFESQLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A PV +    + IN            I  +     + L
Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADILAWINERQTRAFQASNRIVRENQERVNKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LDRL   L  + +  I         + +R++S  L+  I +
Sbjct: 297 AQSVIFRQPERLYDGYLQKLDRLNMALVSSFKENIASNKDSEIQMRHRLQSIDLMSRINR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  I    Q                                                + 
Sbjct: 357 YQDRITSLSQQ-----------------------------------------------LT 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           +      +S           L S      + RGY  +       I     +     + I 
Sbjct: 370 YDAKASFESKLRRFEKAQDTLLSLDTSRIIARGYAML-HKGEEVIASVEQIEKGDHLNIQ 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V +  
Sbjct: 429 LKDGQLEVEVKDVN 442


>gi|227878892|ref|ZP_03996797.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus
           crispatus JV-V01]
 gi|256849772|ref|ZP_05555203.1| exodeoxyribonuclease VII  EX7L [Lactobacillus crispatus MV-1A-US]
 gi|262046529|ref|ZP_06019490.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           MV-3A-US]
 gi|227861526|gb|EEJ69140.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus
           crispatus JV-V01]
 gi|256713261|gb|EEU28251.1| exodeoxyribonuclease VII EX7L [Lactobacillus crispatus MV-1A-US]
 gi|260572978|gb|EEX29537.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus
           MV-3A-US]
          Length = 455

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 135/498 (27%), Positives = 245/498 (49%), Gaps = 58/498 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            ++   +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    K++F PEEG++  V+G ++ +     YQ   E + P+G G L   L++ + KL
Sbjct: 61  MFRSFFEKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF   HK P+P  P  IAV+TS +GAVI DI+   + RFP   + ++P +VQGD  
Sbjct: 121 AKEGLFDPAHKKPLPHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +  A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR +    +P+IS+
Sbjct: 181 ADSLIRAMQQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMPMPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL D  AD RA TPT AAE A P      + +  L ++L   +  +I+ K + 
Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDELAHIKQLTSQLVASMQNIIRSKRDR 295

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+ +     +    +       ++D+L + L+++++  +    + +  +  R+ S     
Sbjct: 296 LSRVQNSVIMREPTRLYDQQIQQVDQLKQRLQNSMQNRVTHSAQSYQLLKQRLFSVSPDK 355

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I + +Q     QQ +   ++ +                                     
Sbjct: 356 KINQLQQQKQFLQQRMIDNMQHY------------------------------------- 378

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +K+     +   + L  ++   TL+RG+    + +   I+  + +    R
Sbjct: 379 ----------LKNKRNVFTQVMQQLDDYSPLKTLERGFVYSTNEHGETISSVKQVQKDDR 428

Query: 485 ILINFFDGQANAIVINKA 502
           +L++F DGQ +A+V    
Sbjct: 429 LLLHFKDGQVDAVVTKIK 446


>gi|182417993|ref|ZP_02949300.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum
           5521]
 gi|237668474|ref|ZP_04528458.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378164|gb|EDT75699.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum
           5521]
 gi|237656822|gb|EEP54378.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 399

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 221/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VSE++ ++K +++++   +++ V+GEIS  +  HSSGH YFSLKD+  +++ +
Sbjct: 1   MKIKTLTVSEVTNYIKRVLDNDFILNNLSVKGEISNLK-YHSSGHIYFSLKDDKGKVNCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG  + ++F  EEG+E ++ G+ + +P +  +QI  + +   G G L    EK K+KL
Sbjct: 60  MFKGNASFLKFKLEEGMEVIICGRASIYPATGSFQIYCDEIQKEGQGELFIKFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            +EG F  ++K PIP  PK + V+TSPTGA IRDI+     R   + ++++P KVQG   
Sbjct: 120 SKEGYFDVENKMPIPAYPKRVGVVTSPTGAAIRDIINVSRRRNDSIDIVLYPAKVQGVGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            KE+   I   N           D+II+ RGGGSIE+LW+FN+E +   + +S IPIISA
Sbjct: 180 YKEVMEGIKYFN------MKNNVDVIIVGRGGGSIEELWNFNEEELAMTVYDSHIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ +D RA TP+  AE+AVP+K  + +++ NL   L++ I   IK  IN 
Sbjct: 234 VGHEIDYTICDFVSDFRAVTPSQGAEIAVPLKSEILNNIDNLRKNLDDNIEYKIKSCINE 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +N+  + L   +    ++ S   +D+L   L   ++  + ++ ++  H+ N + +     
Sbjct: 294 INNAERILKIHSPLSLIANSYLEVDKLKERLNFAIKTKLNKEKKNIEHLNNLLIAYNPTK 353

Query: 365 NIQKNRQHILEKQQHI 380
            I+K    I + + +I
Sbjct: 354 VIEKGYAIIEDDENNI 369



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 52/124 (41%), Gaps = 2/124 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
           +I   +++++  ++  ++      +   A   +      + I   +  + KL  R+ F +
Sbjct: 271 NIDNLRKNLDDNIEYKIKSC--INEINNAERILKIHSPLSLIANSYLEVDKLKERLNFAI 328

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K+     ++     +L ++     +++GY  I+D  NN I  K  L  + ++ I   D
Sbjct: 329 KTKLNKEKKNIEHLNNLLIAYNPTKVIEKGYAIIEDDENNIIISKNQLNEEKKLNIILKD 388

Query: 492 GQAN 495
           G+  
Sbjct: 389 GKVK 392


>gi|283781732|ref|YP_003372487.1| exodeoxyribonuclease VII, large subunit [Pirellula staleyi DSM
           6068]
 gi|283440185|gb|ADB18627.1| exodeoxyribonuclease VII, large subunit [Pirellula staleyi DSM
           6068]
          Length = 405

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 198/371 (53%), Gaps = 11/371 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+   +    +    SV E +  ++ ++E   S V V GE+S       SGH YF+LKD+
Sbjct: 1   MSSTDESTPENA--LSVGEFTRLIRGVLEMQFSGVWVSGEVSEVT-RPMSGHIYFTLKDD 57

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  ++W+   ++++F  EEG E L +G I  +P    YQ+++   +P G G +  A 
Sbjct: 58  EAQLRCVMWRSAASRLKFKIEEGSELLCLGDIDIYPPRGSYQLVVRQAVPQGMGAMQLAF 117

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++  KKL  EGLF    K P+P  P+ +A +TSPTGA +RD L+    R+P L V+I P 
Sbjct: 118 QQLHKKLAAEGLFDPARKRPLPKFPRKVAFVTSPTGAAVRDFLEVARRRWPGLSVLIIPA 177

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+    EI   I   N L +     RPD++++ RGGGS+EDLW FN+E +VRAI  S
Sbjct: 178 RVQGEGAAAEIVRGIQIANRLAD-----RPDVLLVGRGGGSVEDLWCFNEEPVVRAIYAS 232

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP++SA+GHE D TLAD  ADLRA TP+ AAE  VP +  L   +++   RL + +   
Sbjct: 233 EIPVVSAVGHEIDVTLADLVADLRALTPSEAAERIVPSRAELLERIMSARTRLASALAST 292

Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            +     L   +  + L +    L     RLD L   L  +++  + R       +   +
Sbjct: 293 TRQARRRLEGLAQRRVLSHPRDRLQSIAERLDLLDERLRSSVKRKLERLADRQAQLAASL 352

Query: 358 KSDFLIHNIQK 368
            S   +  + +
Sbjct: 353 HSLSPLAVLGR 363



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 3/147 (2%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIF 414
           +        I  +R  +LE+       +   L     + + ++  L   R     ++R+ 
Sbjct: 258 LTPSEAAERIVPSRAELLERIMSARTRLASALASTTRQARRRLEGLAQRRVLSHPRDRLQ 317

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFI 473
            +   +  L  R+   +  K++      +     L S +    L RGY+  Q   +N  +
Sbjct: 318 SIAERLDLLDERLRSSVKRKLERLADRQAQLAASLHSLSPLAVLGRGYSVTQREADNRVV 377

Query: 474 TQKRNLATKTRILINFFDGQANAIVIN 500
               +    T +      G+  +IV  
Sbjct: 378 ESPADAPDGTILRTRVAGGEVRSIVAG 404


>gi|47093748|ref|ZP_00231498.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           str. 4b H7858]
 gi|47017869|gb|EAL08652.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes
           str. 4b H7858]
          Length = 425

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 142/474 (29%), Positives = 232/474 (48%), Gaps = 58/474 (12%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  V VRGEIS  +   +SGH YF++KD  + + ++++   + KI F+PE+G+  L+ G+
Sbjct: 1   MKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFHKAVQKIGFVPEDGMNVLITGR 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           I  F  + +YQ   E + P G G L   LE+ K +L +EGLF++ HK  +P  P  +AV+
Sbjct: 60  IGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKEGLFAETHKKVLPSFPSKVAVV 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS TGA +RDIL  I  R P + VI++P  VQG++  ++I   I ++N           D
Sbjct: 120 TSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQKIVENIGKINQR------NDID 173

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD+ L+D++AD+RA TPT A
Sbjct: 174 VMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETDFALSDFSADVRAATPTAA 233

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328
           AE+AVP    L+  L   + RL  +  + ++ K  +L  L + L        L     R 
Sbjct: 234 AELAVPDYRDLEERLAERKYRLLAVTRQELERKERSLEQLKQHLILNGPKHQLEQQMERT 293

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           D     L +     IF K   F+ + +R+        I+  ++ +  + Q +E+ +K   
Sbjct: 294 DYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIELQKEQMALRLQALEKAMK--- 350

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                       +L   ++    +I                                   
Sbjct: 351 -----------QLLKDKQQSFFRQIDA--------------------------------- 366

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           L+  +  + LKRG+       N  +   + L     I +    GQ  A++  K 
Sbjct: 367 LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQVKMQGGQIEALITAKE 419


>gi|91203444|emb|CAJ71097.1| strongly similar to exodeoxyribonuclease VII large chain
           Escherichia coli (K12) [Candidatus Kuenenia
           stuttgartiensis]
          Length = 412

 Score =  303 bits (775), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 138/370 (37%), Positives = 211/370 (57%), Gaps = 10/370 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             ++S ++  +++ +E   SHV + GE+S  +   SSGH Y +LKD H++I A+I+K   
Sbjct: 18  ILTISGITGKIRNSLEQGFSHVWITGEVSNLK-KPSSGHLYLTLKDEHAQIQAVIFKSVA 76

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N I+F  ++G+E L  G IT +    +YQIIIE++ P G G L  A  K K++L +EGLF
Sbjct: 77  NWIKFDLKDGMEVLAFGSITVYEPRGQYQIIIENIEPKGFGALQQAFLKLKERLGKEGLF 136

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              +K P+P +P+ IA++TS TGA I+DIL  I+ RF  + ++I+PV+VQG+   +EIAN
Sbjct: 137 DPCYKKPLPLLPQKIAIVTSLTGAAIKDILNVINRRFAKMEILIYPVRVQGEGAAREIAN 196

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI  LNT+         D+II+ RGGGS+EDLW FN+E++ R+I  S IP+ISA+GHE D
Sbjct: 197 AIDNLNTIA------GIDVIIVGRGGGSLEDLWAFNEEVVARSIFTSKIPVISAVGHEID 250

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSL 310
            T++D  AD+RA TPT AAE+ VP  + L  +L  ++ARL   +   IK   +       
Sbjct: 251 VTISDLVADIRALTPTEAAELVVPCYDQLTDALEKIKARLIQSLYNKIKTDRSRLLRAEH 310

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                     +   +  LD   + L       +  +      + NR++S   +  +Q+  
Sbjct: 311 SFPFKRPFDRIHRLQQVLDENMQRLVMLCGHTLKMEKEQLKGLANRLESVSPLKVLQRGY 370

Query: 371 QHILEKQQHI 380
                 Q  I
Sbjct: 371 SITTVLQNDI 380



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 52/131 (39%), Gaps = 3/131 (2%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + + +  + Q +  + +      +   A      ++  +RI  L   + + + R+  +  
Sbjct: 283 LEKIKARLIQSL--YNKIKTDRSRLLRAEHSFPFKRPFDRIHRLQQVLDENMQRLVMLCG 340

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNLATKTRILINFFD 491
           H +K     +      L+S +    L+RGY+      N+  +   + L++ T++    +D
Sbjct: 341 HTLKMEKEQLKGLANRLESVSPLKVLQRGYSITTVLQNDIPVKSCKELSSGTKVRTRLYD 400

Query: 492 GQANAIVINKA 502
           G   + +I   
Sbjct: 401 GSFVSSIIEIE 411


>gi|225164421|ref|ZP_03726681.1| Exodeoxyribonuclease VII [Opitutaceae bacterium TAV2]
 gi|224800973|gb|EEG19309.1| Exodeoxyribonuclease VII [Opitutaceae bacterium TAV2]
          Length = 446

 Score =  303 bits (775), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 127/502 (25%), Positives = 226/502 (45%), Gaps = 83/502 (16%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SV+E +  +K ++ES L    VRGE+S  R   +SGH YFSLKD  +++ A++++G   +
Sbjct: 23  SVTEFTRRVKVLLESQLHADWVRGEVSNLRIQ-ASGHVYFSLKDAGAQLSAVMFRGDAAR 81

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 +G++ +V G+++ +    +YQ+I+  ++  G G L    E  K+KL  EGLF+ 
Sbjct: 82  QAVALRDGMQVVVFGQVSVYEARGQYQLIVRLVVEDGVGRLQREFEALKRKLAAEGLFAS 141

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
           + K P+P +P+ +  ITSPTGA ++D  + ++ R    RV++ P +VQG+    ++   +
Sbjct: 142 ERKRPVPALPRTVGFITSPTGAAVQDFCRILTRRGWRGRVVVLPARVQGEGAAADMIAML 201

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            +   L         D++++ RGGGSIEDLW FN+E +VRA+A   +P++SA+GHE D+T
Sbjct: 202 EEAARLGM------FDLLVIGRGGGSIEDLWAFNEEGLVRAVAACPVPVVSAVGHEIDFT 255

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D+AAD+RA TP+GAAE+                                         
Sbjct: 256 LCDFAADVRAETPSGAAELISSGFV----------------------------------- 280

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                     R R  +L   L   L   +    R  +H   R++       +++    + 
Sbjct: 281 --------RERERFQQLAEGLRRELVTAVGEASRRLDHARARLRLLAPSAQVERGFLRLD 332

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           +    ++  + Q +R     ++++   L                         E     +
Sbjct: 333 DLGNRLQASLTQSVRA----RRQRFTELRAAFR--------------------ERSPETR 368

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRN---LATKTRILINFF 490
           ++     +    + LQ+ + ++ L RG+  ++D      + ++     L    R+   F 
Sbjct: 369 VQIESHRLLGLWKRLQAASPESVLNRGFVILRDEATGQPVQRRAELAKLKAGARLRAQFA 428

Query: 491 DGQANAIVINKAPPKEQPTKKC 512
           DG+A       AP       K 
Sbjct: 429 DGEAELS----APSARTTKPKG 446


>gi|258591117|emb|CBE67412.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit) [NC10
           bacterium 'Dutch sediment']
          Length = 413

 Score =  302 bits (774), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 133/370 (35%), Positives = 210/370 (56%), Gaps = 10/370 (2%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
             Y+VS+L+  ++  +E + + + V GE+S +   HSSGH YFSLKD  S+I  ++++  
Sbjct: 8   KIYTVSDLTTEIRATLEGSFAGIWVEGELSNF-HRHSSGHMYFSLKDEGSQIRVVMFRTA 66

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ F P++G+  LV G+++ +    +YQ++ E + P G G L  A E+ K++L  EGL
Sbjct: 67  NRQLRFQPKDGLVLLVYGELSVYERRGEYQLVAEYMEPKGLGALQLAFEQLKQRLQAEGL 126

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F D  K PIP +P+ I V+TSPTGA +RDIL  +  RF  + V+I PV VQGD+   EI 
Sbjct: 127 FDDARKRPIPLLPRRIGVVTSPTGAAVRDILHVLRRRFAGVDVLICPVAVQGDQAAPEIV 186

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ +LN           D++I+ARGGGSIEDL  FN+E + RAIA S IP+ISAIGHE 
Sbjct: 187 EALGELNRR------GGLDVVIVARGGGSIEDLQAFNEESVARAIAASRIPVISAIGHEI 240

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ ADLRAPTP+ AAE+ +  ++ L   L +L +R+  +I   +      ++ L 
Sbjct: 241 DYTIADFVADLRAPTPSAAAELVIARQDELLQRLDDLGSRMAGVIRSRLHGLGVRISGLE 300

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           + L   N  + +   R  L    + L    +  +   +      + ++ +   +  + + 
Sbjct: 301 RHLRLLNPIEQIRMQRRSLTERWKALTALADRRLTMLHGELKAAVGKLDALSPLAILHRG 360

Query: 370 RQHILEKQQH 379
               L    H
Sbjct: 361 YSICLRLPDH 370



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 15/169 (8%), Positives = 46/169 (27%), Gaps = 6/169 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ-----HLRYIFLEKKEK 398
                     +  +++       +       E  Q ++ +  +       R   L  +  
Sbjct: 238 HEIDYTIADFVADLRAPTPSAAAELVIARQDELLQRLDDLGSRMAGVIRSRLHGLGVRIS 297

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
               H+       +I      + +    +  +   ++   H  +      L + +    L
Sbjct: 298 GLERHLRLLNPIEQIRMQRRSLTERWKALTALADRRLTMLHGELKAAVGKLDALSPLAIL 357

Query: 459 KRGYTS-IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            RGY+  ++  ++  +     +     + +    G+    V     P  
Sbjct: 358 HRGYSICLRLPDHEIVKDSSTVVAGDLVEVRLHRGRLRCDVREVQAPTP 406


>gi|332799349|ref|YP_004460848.1| Exodeoxyribonuclease 7 large subunit [Tepidanaerobacter sp. Re1]
 gi|332697084|gb|AEE91541.1| Exodeoxyribonuclease 7 large subunit [Tepidanaerobacter sp. Re1]
          Length = 405

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 149/361 (41%), Positives = 224/361 (62%), Gaps = 12/361 (3%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           P  +VSE++  +K++ ++N  L HV ++GEIS ++  H SGH YF+LKD  S+I  ++++
Sbjct: 3   PVLTVSEVTNIIKYLFDNNEILRHVYIKGEISNFKH-HISGHMYFTLKDEKSQIRCVMFR 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F+PE G+  + +G I+ F  S +YQ+ IE L P G G L  A EK K++L +E
Sbjct: 62  NNNILLPFMPENGMRVVALGFISIFAKSGEYQLYIEDLQPDGIGALHIAFEKLKERLDKE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189
           GLF  Q K PIPF+PK I +ITS TGA IRD+L  I  RF  + +II PV VQG +  +E
Sbjct: 122 GLFELQRKQPIPFLPKKIGIITSLTGAAIRDLLTVIKRRFSNVDIIIAPVLVQGRDAAEE 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I +AIL+LN L         D+II+ RGGGSIE+LW FN+E + RAIANS IP+ISA+GH
Sbjct: 182 ICSAILELNRL------KNIDVIIVGRGGGSIEELWAFNEEKVARAIANSLIPVISAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+T++D+ AD RAPTP+ A E+AVP K  LQ+ +  +  RL N I+  I  +   L  
Sbjct: 236 ETDYTISDFVADKRAPTPSAAGEIAVPEKRVLQNEIRYISLRLINGILSYIGARRQKLEY 295

Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L +       +  +      +D+  + L+ ++++ I +     NH I R+++   +  ++
Sbjct: 296 LKRAPIFKRPETYIINCSLIIDQTSKRLQKDIDLYISKNKSILNHYIARLEALNPLSILK 355

Query: 368 K 368
           +
Sbjct: 356 R 356



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 3/115 (2%)

Query: 395 KKEKIAILHM--LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +++K+  L    + ++ +  I      I +   R++  +   I    + ++     L++ 
Sbjct: 289 RRQKLEYLKRAPIFKRPETYIINCSLIIDQTSKRLQKDIDLYISKNKSILNHYIARLEAL 348

Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
              + LKRGY+     + N  I    ++     ++I    G+    V +     +
Sbjct: 349 NPLSILKRGYSICMSADTNKIIKHPEDVKKGDSVVILLSGGRLLCSVEDSKRKGD 403


>gi|313890757|ref|ZP_07824382.1| exodeoxyribonuclease VII, large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120858|gb|EFR43972.1| exodeoxyribonuclease VII, large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 447

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 141/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS+L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW G 
Sbjct: 5   LSVSQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATIWGGI 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  ++G++  +  S  Y IIIE + P G G L    E+ K KL +EG 
Sbjct: 63  YKKLGFDLEEGMKVNIVGRVQLYEPSGSYSIIIEKVEPDGVGALALQFEQLKAKLSKEGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+D HK  +P   + I V+TSP+GAVI+DI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FNDNHKQALPQFSRKIGVVTSPSGAVIKDIITTVSRRFPGVDILLFPTKVQGNGAAEEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N   +       D++I+ RGGGSIEDLW FN+E++V+AI  S +PIIS++GHET
Sbjct: 183 ANIALANQRTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A PV +    S I+ +          +  +     + L
Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADIISWISEQQNRAYQANLRLLKQKGDRLAKL 296

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       ++DRL  +L +  +  +         + +R++S  ++  + +
Sbjct: 297 SQSVIFRQPERLYDGFLQKIDRLQSQLTYQAKQKLSESQHLEVSLRHRLQSLDIVTKLSR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +    Q ++  +++   +                                      
Sbjct: 357 YQEKMNYINQRLQINMQKRYDHAL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L +   +  + RGY  ++  +   I+   ++A    + + 
Sbjct: 381 -----------ARFEKAQDTLLALDTERIIARGYGILR-KDEEVISSVTSIAVGDALDLE 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 LQDGQIEVEVKNVK 442


>gi|125717529|ref|YP_001034662.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK36]
 gi|158513224|sp|A3CLQ7|EX7L_STRSV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|125497446|gb|ABN44112.1| Exodeoxyribonuclease VII large subunit, putative [Streptococcus
           sanguinis SK36]
          Length = 446

 Score =  302 bits (773), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 157/500 (31%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N           D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERS------VLDVLIIGRGGGSIEDLWAFNEEKTVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADHRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q  ++   + ++ +   +         + +                             
Sbjct: 354 VQHLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   I     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|302877904|ref|YP_003846468.1| exodeoxyribonuclease VII, large subunit [Gallionella
           capsiferriformans ES-2]
 gi|302580693|gb|ADL54704.1| exodeoxyribonuclease VII, large subunit [Gallionella
           capsiferriformans ES-2]
          Length = 447

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 57/488 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
              VSEL+  +  ++E N+  + VRGEIS      +SGH YF+LKD  +++  ++++   
Sbjct: 13  VLQVSELTRAINQLLEGNVPALWVRGEISNLV-KAASGHWYFALKDEQAQVRCVMFRHKN 71

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++     G +  ++   + +     +Q+ +E L P+G G L     + K+KL +EGLF
Sbjct: 72  QSLDSTIANGSQVELLAVASLYEARGDFQLTVEQLRPAGLGVLYEQFARLKQKLEDEGLF 131

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P  P+ + +ITSP  A +RD+L  +  R P + VI++P  VQG    ++IA+
Sbjct: 132 DATCKRALPAFPRRVGIITSPQAAALRDVLTTLKRRLPGVPVILYPTPVQGAGSAEKIAD 191

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI       E        ++IL RGGGSIEDLW FN+E++ RAI  S+IPI+S +GHETD
Sbjct: 192 AIQTACERNE------CSVLILCRGGGSIEDLWSFNEEVVARAIFASAIPIVSGVGHETD 245

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD RAPTPT AA+ AVP +E L   L +    L       ++  +  L+ L +
Sbjct: 246 FTIADFVADERAPTPTAAAQRAVPDRETLLKGLRDTAQHLLRSQRNRLQNAMQALDYLQR 305

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  + L      LD++ + L+ N    + ++        +R++      + ++ +  
Sbjct: 306 RVVHPAEQLKQKSTVLDQMQQRLQRNFSHGLQQEQWRCKSYTHRLRGA--GSDFRRMQDK 363

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           ++ +   + Q ++       +        L +L       +   ++ ++    R+     
Sbjct: 364 LVHQSARLVQAMQTGQSRKQVRLATAGQHLGLL--NPAQVLARGYSLVQHSDGRLVCA-- 419

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
                                                         LAT   + I F  G
Sbjct: 420 -------------------------------------------AEQLATGDTLRITFASG 436

Query: 493 QANAIVIN 500
            A   V  
Sbjct: 437 WATTEVTE 444


>gi|220929323|ref|YP_002506232.1| exodeoxyribonuclease VII large subunit [Clostridium cellulolyticum
           H10]
 gi|254783696|sp|B8I3A9|EX7L_CLOCE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|219999651|gb|ACL76252.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulolyticum
           H10]
          Length = 404

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 214/369 (57%), Gaps = 12/369 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K +V ++  LS V +RGEIS ++  H +GH YF++KD +S +  ++++ 
Sbjct: 4   VYSVSDINNYIKQLVSNDIILSDVSIRGEISNFKH-HYTGHMYFTIKDKNSLLKCVMFRS 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F PE G++ +V G I+ F    +YQ+   S+ P G G L  A E+ K+KL  EG
Sbjct: 63  QAVSLRFSPENGMKVIVSGYISVFERDGQYQLYASSMQPDGVGALHIAFEQLKEKLQREG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  ++K  IP +P  I V+TS TGAVIRDI+     R   ++++++PV VQG +   +I
Sbjct: 123 LFDPENKKKIPVLPGSIGVVTSSTGAVIRDIINVTYRRNSKMKLVLYPVAVQGQQAAGQI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI  LN         + D+II+ARGGGS+E+LW FN+E++ R+I  S+IP+ISA+GHE
Sbjct: 183 AEAIKCLN------EQNKVDVIIVARGGGSLEELWAFNEEIVARSIYASNIPVISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN-- 308
           TD+T+ D+ +D+RAPTP+ AAE+AVP  E L   L +   R+ + + + +    N L   
Sbjct: 237 TDFTICDFVSDMRAPTPSAAAELAVPDMEVLLYKLESYNMRMKSSLAKKVTTLKNQLQKL 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +           ++  R  LD L + +    + II  K   F  +  ++ +   +  +++
Sbjct: 297 NARPFFAQPYDRVNQQRQTLDNLTKSMVRENQTIIKDKKSQFGMLAGKLDALSPLKILER 356

Query: 369 NRQHILEKQ 377
               +   Q
Sbjct: 357 GYSLVKNPQ 365



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%)

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            L+ + +         Q  +R+      +  L   +       IK   +   +    L +
Sbjct: 288 TLKNQLQKLNARPFFAQPYDRVNQQRQTLDNLTKSMVRENQTIIKDKKSQFGMLAGKLDA 347

Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +    L+RGY+ +++     +   + +    ++ I   DG A   VI+    K
Sbjct: 348 LSPLKILERGYSLVKNPQGYVVNNVKQINIGDKLEILMNDGLAECDVISVREGK 401


>gi|242278212|ref|YP_002990341.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio salexigens
           DSM 2638]
 gi|242121106|gb|ACS78802.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio salexigens
           DSM 2638]
          Length = 459

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 121/513 (23%), Positives = 213/513 (41%), Gaps = 79/513 (15%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
             +SV++++  +K ++E+    + VRG+++      +SGH YF+L D  + +  + +KG 
Sbjct: 2   KIFSVTDITRAVKDVLETEFPFIWVRGQVTNL-ARPASGHIYFTLTDGDAGLSVVWFKG- 59

Query: 73  LNKI--------------------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112
             ++                        E+G+E L  G +  +P    YQ++ E +   G
Sbjct: 60  NQRMGGADGEDSINPLTGEIESGGPLELEDGMEILCAGHMNVYPPRGVYQLVAELVQEQG 119

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-P 171
            G L  A E  K+KL E+G F D  K  IP  PK +AV+T+PTGA +RD L+    R   
Sbjct: 120 VGDLKLAFEAMKRKLAEKGYFDDDRKMEIPRSPKRVAVVTAPTGAAVRDFLKIAETRGTG 179

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             + I+P  VQGD  P +IA A+  +            ++++L RGGGS+EDLW FN E 
Sbjct: 180 AEIRIYPTLVQGDLAPGQIAQALDTVYDDGWA------EVVVLIRGGGSLEDLWAFNTEQ 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +  A+  +++P++  +GHE D ++ADY AD R  TP+ AA+   P +E L  ++  L+  
Sbjct: 234 VADALFRATVPVVCGVGHEVDVSIADYVADKRVATPSHAAQELWPRRETLMQTVDELDGS 293

Query: 292 LNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           L       +  + + L +L K L   +  Q +             L+      +  K   
Sbjct: 294 LVRSFDNFLNVRESRLETLQKGLSWLSPAQRIERLLTSFAEEADRLDRAAGKFVSAKSDT 353

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            + + +R+   F    I++        Q  + +                           
Sbjct: 354 VSALSHRLSFAFGEERIERMENDFSGLQNRLSRAADMF---------------------- 391

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DT 468
                                L  K+             L+    ++ L+RGY+ +  + 
Sbjct: 392 ---------------------LKDKLAEYEN----AATSLRMLDPESPLERGYSLVTVEK 426

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +  F+     +A    I +    G+  A V ++
Sbjct: 427 SGTFLRSPDEVADGDAIRVRVKSGEVRARVTSE 459


>gi|89901921|ref|YP_524392.1| exodeoxyribonuclease VII large subunit [Rhodoferax ferrireducens
           T118]
 gi|89346658|gb|ABD70861.1| Exodeoxyribonuclease VII large subunit [Rhodoferax ferrireducens
           T118]
          Length = 472

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 120/513 (23%), Positives = 204/513 (39%), Gaps = 89/513 (17%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           +   ++    + +  L   +   ++S  + V VRGE+SG+    SSGH YFSLKD  +++
Sbjct: 28  TDNPAMTPRVWQIGALCRAIAAALDSRFNPVVVRGELSGF-SRASSGHCYFSLKDESAQV 86

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              +++   + ++F P +G    V G++  +      Q+I+ES+  +G G L     + K
Sbjct: 87  RCAMFRRAASSLDFSPRDGELVEVRGRLGVYEPRGDLQLIVESMSRAGQGALFEQFLQLK 146

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQG 183
            KL  +GLF+ + K  +P +P+ I V+TS   A + D++  +  R   + V+I P  VQG
Sbjct: 147 AKLEAQGLFAAERKRQLPVLPRGIGVVTSLGAAALHDVVTTLQRRVSHIPVVIAPATVQG 206

Query: 184 DECPKEIANAILQLNTLKEGR-----------------TCPRPDIIILARGGGSIEDLWH 226
              P E+  A+L L  L +                     P  D+I+L RGGGS+EDLW 
Sbjct: 207 SNAPGELIQALLNLYRLTQEGRGLEPDFTKKTKKKGESAAPCIDVILLVRGGGSMEDLWA 266

Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           FNDE +   +A S +PI+  +GHETD+T+AD+ ADLRAPTPT AAE+    ++    +L 
Sbjct: 267 FNDEQLAHTLAQSPVPIVCGVGHETDFTIADFVADLRAPTPTAAAELVAQPRQLWLGALD 326

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               RL + ++R +  +   L+     L                                
Sbjct: 327 AAARRLQDAVLRRLDQQSQRLDLTTSRLGRPSAL-------------------------- 360

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                              + +    +    Q ++      ++        + A L    
Sbjct: 361 -------------------VGRQGLRLGASAQRLQLASTHFVQQRQQALLRQQAALPTAA 401

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
           ++   R             R++                    L        L RGY  + 
Sbjct: 402 QRGLQRQD----------ERLQRAALR---------------LGLLDPHLVLARGYAWLS 436

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             +   I+  +       +     DG  +  V 
Sbjct: 437 TPDGVGISSVQQTWPGQAVRATLADGAVDLTVT 469


>gi|116328175|ref|YP_797895.1| exodeoxyribonuclease VII large subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116330899|ref|YP_800617.1| exodeoxyribonuclease VII large subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|122281348|sp|Q04TB1|EX7L_LEPBJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|122284034|sp|Q051N3|EX7L_LEPBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116120919|gb|ABJ78962.1| Exodeoxyribonuclease VII, large subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116124588|gb|ABJ75859.1| Exodeoxyribonuclease VII, large subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 422

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 138/495 (27%), Positives = 210/495 (42%), Gaps = 79/495 (15%)

Query: 11  DHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           D    +VSE++  LK+++    +L ++ VRGEIS Y    SSGH YFSLKD+ S +    
Sbjct: 3   DSKPLTVSEVTRILKNLITGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDSSSLMRCTF 61

Query: 69  WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +  +       P  +G E  V G +T +     Y + +  +   G G +L  +EK K+KL
Sbjct: 62  FNYSNKNYSGKPLSDGKEVQVYGTVTLYEAGGSYNLNVARVEELGQGDILLQIEKLKQKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EG+F  + K  IP  PK + + TSP+GA I DI++    RFP + ++I P  VQGDE 
Sbjct: 122 AAEGIFDPERKRRIPSFPKTLGIATSPSGAAIEDIIKIARSRFPGINILISPCFVQGDEA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P  I  AI +LN           D+II  RGGGS EDL  FNDE +VRA ANS IPIISA
Sbjct: 182 PDSIVAAIEELN-----HPSWGVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRIPIISA 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GH+TD  L+D+AAD   PTPT AAE AVP +E +                         
Sbjct: 237 VGHQTDVLLSDFAADYSTPTPTAAAEYAVPKEEDVL------------------------ 272

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                                L +L   L+ +L   I         +  +      +  +
Sbjct: 273 -------------------QFLTQLEGRLKTSLLAKISSSKDRLRLLSGKFIFKEPMQLL 313

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q + E    +++ V                          N++      +++    
Sbjct: 314 NQRNQRVDEIGVRLQKAVF-------------------------NKVGLARVRLERYED- 347

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + +            T  ++  +   T+KRGY+ +++     I        +  + 
Sbjct: 348 LTSRMRNIFFHKKQKAEFWTTKVEDLSPPATMKRGYSILRNQKGKIIRSPEETKPEEELQ 407

Query: 487 INFFDGQANAIVINK 501
           +    G    I   K
Sbjct: 408 VLLSGGTMQVIRKGK 422


>gi|331703118|ref|YP_004399805.1| Exonuclease VII, large subunit [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801673|emb|CBW53826.1| Exonuclease VII, large subunit [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 469

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 127/495 (25%), Positives = 219/495 (44%), Gaps = 35/495 (7%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +V EL+  LK ++E+      + V+GE+S       SGH YFS+K+  + I+ ++W
Sbjct: 2   EKILTVQELNEALKILIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60

Query: 70  KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           K    KI     E+G++ +  G++T +  + +    +  +   G G L    E+R K+L 
Sbjct: 61  KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIKIYGIGDLQKIFEQRYKELE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           ++G F    K PIP   K + +IT+ +GA I D+++ I  R P + + +FP +VQGD+  
Sbjct: 121 QKGWFDPNLKKPIPEFVKNVGIITADSGAAIYDLIRTIHRRLPLINIYLFPAQVQGDKAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           K+IA+ I Q N  +        D++I+ RGGGS EDLW FN+  +++AI NS IPIISA+
Sbjct: 181 KDIASKIKQANDFEVQ-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSQIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE DW L+DY AD+RA TPT A E+       +++ L +       +I+  + +    L
Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKL 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           N+  K                     E    ++     KY     +          + I 
Sbjct: 296 NNYKK---------------------EQTKYIKNNFSFKYLQLKQLSIDNTKWT-KNKIN 333

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                +   +Q I   +   +       K     L    ++  N +    +     I+  
Sbjct: 334 LLIDKLENYKQSINNSILHIINSQ---NKTLKNYLIADEQKIVNYLKKQISEFNYTISSF 390

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           +  ++  +K    S +     L S      L+ GY+ + + NN  I   + +     + +
Sbjct: 391 KGHINQILKYEELSFNTLENKLNSLDPLKPLQNGYSIVTNLNNQKIRSYKQVKLNEDLKV 450

Query: 488 NFFDGQANAIVINKA 502
              D +    +    
Sbjct: 451 ILTDSKLTVTIKEVK 465


>gi|313664986|ref|YP_004046857.1| exodeoxyribonuclease VII, large subunit [Mycoplasma leachii PG50]
 gi|312950070|gb|ADR24666.1| exodeoxyribonuclease VII, large subunit [Mycoplasma leachii PG50]
          Length = 468

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 131/494 (26%), Positives = 228/494 (46%), Gaps = 37/494 (7%)

Query: 14  EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV +L+  LK  +E      ++ V+GE+S       SGH YFS+KD ++ I+ ++WK 
Sbjct: 4   ILSVQQLNESLKTFIEEPDYFKNIYVKGELSNLTFN-KSGHVYFSIKDQNAAINCMMWKS 62

Query: 72  TLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
              K+     E+G++ +  G++T +  + +    ++ +   G G L    E+R K L + 
Sbjct: 63  NTQKLESLNLEDGVQIICHGRLTYYIPTGRVSFEVKDIQIYGIGDLQKIYEQRYKDLKQA 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G F    K P+P   K + +IT+ +GA I D++  I  R P + + +FP +VQG +   +
Sbjct: 123 GWFDQSLKKPLPEFIKNVGIITASSGAAIHDLITTIHRRLPLINIYLFPAQVQGAQSEID 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IAN I Q N  K      + D++I+ RGGGS EDLW FN+ ++++AI +S IPIISA+GH
Sbjct: 183 IANKIKQANDFKV-----KLDVLIVGRGGGSYEDLWAFNELVLLQAIKDSKIPIISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LN 308
           E D  L+D+ AD+RA TPT A E+       +++ L +       +I   +K      +N
Sbjct: 238 EPDVVLSDFVADIRAATPTAAGELVSKDINEIKNRLKHYYQTSKTLIWNKLKLTNQELIN 297

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                +   +  LS     L +L     + ++  I                  LI  +  
Sbjct: 298 FKENQIKFINNYLSNQYLELKQLSIYNPNLVKNKIT----------------SLIDKLDD 341

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           N+  + E  + I          I L+ KE  + L + +++  + +    T     I+  +
Sbjct: 342 NKHFVFESIKKI----------IILQNKEINSYLSINKQKISDYLKKQITDFNFAISSFK 391

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            ++S KIK    S     + +        LK G++ I + N+  IT  + +     + + 
Sbjct: 392 GLISQKIKFEELSFISLEKQVNLLNPLKPLKNGFSIITNLNDQKITSYKQVKINEDLKVF 451

Query: 489 FFDGQANAIVINKA 502
             D +    +    
Sbjct: 452 LSDSKLVVTIKEVK 465


>gi|182413595|ref|YP_001818661.1| exodeoxyribonuclease VII, large subunit [Opitutus terrae PB90-1]
 gi|177840809|gb|ACB75061.1| exodeoxyribonuclease VII, large subunit [Opitutus terrae PB90-1]
          Length = 428

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 123/483 (25%), Positives = 218/483 (45%), Gaps = 75/483 (15%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVSE +  +K ++E  L    VRGE+S  R   +SGH YF LKD  + ++A++++    +
Sbjct: 18  SVSEFTRRVKTLLERGLRPGWVRGEVSNLRAQ-ASGHVYFCLKDAGAAMNAVLFRADAAR 76

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 +G++ +V G+++ +    +YQ I+ ++I  G G L    E  K++L  EGLF  
Sbjct: 77  QTVKLRDGLQIVVYGEVSVYEARGQYQFIVRAVIEDGEGRLRREFEALKQRLATEGLFDP 136

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
             K P+P +P  I  ITSPTGA ++D L+ +  R    RV++ P KVQGD    E+   +
Sbjct: 137 AKKRPLPEMPATIGFITSPTGAAVQDFLRILKRRGWRGRVVVLPAKVQGDGAAAEMIAML 196

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
                    +     D++++ RGGGS+EDLW FN+E +VRA+A S++PI+SA+GHE D++
Sbjct: 197 EL------AQKHGLFDLLVIGRGGGSLEDLWAFNEEPLVRAVAASTVPIVSAVGHEIDFS 250

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D+AAD+RA TP+ AAE+                                         
Sbjct: 251 LCDFAADVRAETPSAAAELISSHFVA---------------------------------- 276

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                    +  R       +    E  + R     +H  +R++       I++    + 
Sbjct: 277 ---------AAQRALGASEAMLSAGEAALERAGARLDHARSRLRLLSPTAQIEQGYLRLD 327

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           +    +   +++++       +E  A   +++   + R+      +  L  R        
Sbjct: 328 DFANRLAAALRENVDGCRQRLRE--ARSLLVQRSPELRVQIESHRLLALWKR-------- 377

Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                         LQ+ +  + L+RG+  ++D     + +K  ++   +++  F DGQ 
Sbjct: 378 --------------LQAVSPTSVLQRGFVIMRDEQGRPVPRKGGVSAGQKLVAEFGDGQL 423

Query: 495 NAI 497
              
Sbjct: 424 PVR 426


>gi|323352719|ref|ZP_08087689.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           VMC66]
 gi|322121755|gb|EFX93501.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           VMC66]
          Length = 446

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEKTVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E  ++  +   + Y    L
Sbjct: 234 HETDTTLADFVADHRAATPTAAAELATLVTKLDLLGHLQQQENHMSRAMSNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|52841062|ref|YP_094861.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54296847|ref|YP_123216.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila str.
           Paris]
 gi|81822622|sp|Q5X6S7|EX7L_LEGPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81823449|sp|Q5ZXA6|EX7L_LEGPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|52628173|gb|AAU26914.1| exonuclease VII, large subunit [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750632|emb|CAH12039.1| Exonuclease VII, large subunit [Legionella pneumophila str. Paris]
          Length = 443

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 147/496 (29%), Positives = 233/496 (46%), Gaps = 57/496 (11%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S   P  +VS+L+  +K  +E+ +  V V GEIS      SSGH YF+LKD+ ++I    
Sbjct: 2   SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60

Query: 69  WKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +K   +  +     +G + +  GK++ +    +YQ+I+E ++ +G G L    E+ K KL
Sbjct: 61  FKNRHSNSLLRNFNDGQQIVATGKLSLYEARGEYQLIVEEIVKAGMGILYQRFEELKIKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGLF+ + K P+P IP+ I +ITSPTGA I+DIL  ++ RFP+ R+II+P +VQG   
Sbjct: 121 ASEGLFNPERKKPLPRIPETIGIITSPTGAAIQDILSTLARRFPIARIIIYPSEVQGQTA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P+++  A+   N         R  ++ILARGGGSIEDLW FNDE + R IA S IP++S 
Sbjct: 181 PQQLVKALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+ AD RA TPT AA    P    L + L     RL++ IIRL+K     
Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLVKGLQLK 294

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN L+  + +  QT+S     LD L R+L   +   I       N    +++++     I
Sbjct: 295 LNHLIDKIASPRQTISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQANNPKTQI 354

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ +  + +    + Q ++  +  +  +    ++ LH +       +   +  + K    
Sbjct: 355 ERTKTQLRQLIMQLNQEIRIQVNQLKNQLSTNLSTLHAV--SPLATLDRGYAIVSKNQRI 412

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +      +I                                                 I 
Sbjct: 413 LFAAQQAQI----------------------------------------------GDTID 426

Query: 487 INFFDGQANAIVINKA 502
           +    G     V    
Sbjct: 427 VRLAKGSLACEVTQIK 442


>gi|319938729|ref|ZP_08013093.1| exodeoxyribonuclease 7 large subunit [Streptococcus anginosus
           1_2_62CV]
 gi|319811779|gb|EFW08045.1| exodeoxyribonuclease 7 large subunit [Streptococcus anginosus
           1_2_62CV]
          Length = 446

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 153/497 (30%), Positives = 235/497 (47%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATIWGGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL EEGL
Sbjct: 63  YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGEEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + +I++P KVQG+    E+A
Sbjct: 123 FEERFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIILYPTKVQGEGASAEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 ENIRRANER------NDLDVLIIGRGGGSIEDLWAFNEEVVVRAIFESHIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  L + L   + RL   +   + Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLAHLQQQQNRLAAAMSNRLTYNRERLAKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD+L   L+  +      + +    + +R+++   +  +Q 
Sbjct: 297 SQSVIFRQPERLYDSYLQKLDQLNLRLKQKIREYYNEEVQRARLLQHRLEALAPLRQVQI 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ + + ++ +   +     +   E K                                
Sbjct: 357 YQERVAQLERLLRSNMAVVYDHKVAEVKR------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                            +  L        + RGY  ++  +   +     +  K ++ I 
Sbjct: 386 ----------------LSDALLMLDTSRIVARGYAIVK-KDEQVLESIEKVNKKDQLTIL 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ    V +    +
Sbjct: 429 MRDGQIEVEVKDVERKE 445


>gi|320106488|ref|YP_004182078.1| exodeoxyribonuclease VII large subunit [Terriglobus saanensis
           SP1PR4]
 gi|319925009|gb|ADV82084.1| exodeoxyribonuclease VII, large subunit [Terriglobus saanensis
           SP1PR4]
          Length = 504

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 135/500 (27%), Positives = 221/500 (44%), Gaps = 55/500 (11%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
                +   ++V  L   L+  VE + S   V GEIS  R    SGH YF+LKD  +++ 
Sbjct: 54  DPPKKERKVWTVRSLVADLRGHVEKDYSDEWVEGEISNCRSAP-SGHFYFTLKDGDAQLP 112

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            ++++     + + PE+G   LV G ++ +    + Q+I E+L P G G L  A E+ ++
Sbjct: 113 VVLFRRQAMLLRWKPEDGQSVLVRGSVSVYESRGQLQLIAETLEPRGEGALRLAYEQLRQ 172

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184
           KLL EGLF  + K  +P  PK I VITS  GAV+RDI      R   L ++I+P  +QG 
Sbjct: 173 KLLAEGLFDAERKRALPRFPKTIGVITSTAGAVLRDIANISKRRHACLNLLIYPALMQGA 232

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E   E+  AI   N        P+ D+I++ARGGGS EDLW FN+E + RAIA S +P++
Sbjct: 233 ESADEVRAAIAYFN----SEAAPKVDLILIARGGGSTEDLWGFNNEALARAIAASGLPVV 288

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHETD+T+AD+ ADLRAPTP+ AAE+    +  +   +  LE RL   +     +  
Sbjct: 289 SAIGHETDFTIADFVADLRAPTPSAAAELITEHQHRVGEQVDMLETRLERAMRYQQMHAR 348

Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
            +   L  A+        +   +  +D L    E+ +  ++ R       + +R+     
Sbjct: 349 QSFARLNSAIAVSRVRDAVERRQQHVDALRFRAENAMSTLLQRHNVLLTGVQHRLARQDA 408

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              +  +R+     +Q +   +   L+ + +  + + A L  L    ++ +   +  +  
Sbjct: 409 GRRVDADRRLFTLLEQRLGASMIAPLQQMRMHLRTEDARLRAL--SPESVLRRGYALVFD 466

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
              R+                                             +     +   
Sbjct: 467 AKGRL---------------------------------------------LRNAAEVQDG 481

Query: 483 TRILINFFDGQANAIVINKA 502
             I+     G+  A V +  
Sbjct: 482 DAIVARLASGEIKARVTDDE 501


>gi|257784445|ref|YP_003179662.1| exodeoxyribonuclease VII, large subunit [Atopobium parvulum DSM
           20469]
 gi|257472952|gb|ACV51071.1| exodeoxyribonuclease VII, large subunit [Atopobium parvulum DSM
           20469]
          Length = 449

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 125/491 (25%), Positives = 197/491 (40%), Gaps = 56/491 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWKGT 72
             SVS+     K+ V +++  + V GE+SG+RG  + SGH YF +KD  S +  I+W   
Sbjct: 11  VLSVSDAVLFAKNEV-ASMPSMTVVGEVSGFRGPNYKSGHCYFDVKDPVSSMSVIVWSKI 69

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                   ++G++  + GK   +  S K      ++  +G G L   + +  KKL +EGL
Sbjct: 70  YAASGITLQDGMKIQMKGKFDIYASSGKLSFHARTIQIAGEGDLRQKVAQLAKKLEKEGL 129

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
                K  IP     I V+TS +G+VI D+ + ++ R P + + +    VQG   P  I 
Sbjct: 130 TDISRKRSIPEFCTRIGVVTSLSGSVIDDVKRTLARRNPLVELEVSGCAVQGTHAPATII 189

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+             RPD I+L RGGGS EDL  FNDE + RAIA   IP+I+ IGHE 
Sbjct: 190 RALQVA-------ATTRPDAILLVRGGGSFEDLMCFNDEGVARAIAACPIPVITGIGHEP 242

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+AD  +D R  TPT AAE   P       ++  L+   NN I RL       L    
Sbjct: 243 DTTIADMVSDRRTSTPTAAAESVAP-------AISELQTTFNNRISRLGNATRKILQFYK 295

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L   +Q                   ++ ++  K    + + +R      I+ I    +
Sbjct: 296 TGLITVEQR--------------SNLAMKNVLSSKKYQLDKLSDRPCLKDPIYIISTRTE 341

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + + +Q +                                +      +     R+    
Sbjct: 342 DLNQTEQRLMDAFP-------------------------ALLSRKKEMLFVESQRLTRAS 376

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           +         +S     L + +    L RGY  +QD   + I   +  +    +L+   D
Sbjct: 377 AAMFHPHQALLSSLAGRLDALSPLKVLTRGYAYVQDERGSVIKTAKEASVGDSLLVKMRD 436

Query: 492 GQANAIVINKA 502
           G   A V +  
Sbjct: 437 GTIKATVSDIE 447


>gi|297616621|ref|YP_003701780.1| exodeoxyribonuclease VII large subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144458|gb|ADI01215.1| exodeoxyribonuclease VII, large subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 410

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 132/360 (36%), Positives = 205/360 (56%), Gaps = 11/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VSEL+ ++K ++E++  L+ + V+GEIS ++    SGH+YFSLKD  + I  ++++ 
Sbjct: 6   ILTVSELTMYIKSLLENDMVLASIWVKGEISDFKYYQKSGHSYFSLKDEGAVISCVMFRS 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F+PE G++ + +G ++ F  S +YQ+ +E L P G G L   L + +++L +EG
Sbjct: 66  RARSLRFVPENGMKVIALGYVSVFERSGRYQLYVEDLEPDGIGALYLQLLQLRQRLEKEG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LFS   K P+P     + V+TS  GA  RDIL+ I  R P   V++    VQG+  P+EI
Sbjct: 126 LFSPDKKKPLPKFANRVGVVTSADGAAFRDILKVIRQRHPGAVVVLAHSSVQGESAPQEI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI  LN   E       D+II+ RGGGS EDLW FN E +VRA++ SS+P+ISA+GHE
Sbjct: 186 ARAIRALNEYGE------IDVIIVGRGGGSFEDLWAFNTEEVVRAVSASSVPVISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D++L D  AD+RA TPT AA++AVP  E L+  L  L+ R+   + R I+ K  T++  
Sbjct: 240 VDYSLCDLVADVRAATPTQAAQLAVPDIEALRQDLALLQRRMRRAMERNIESKWQTVDYF 299

Query: 311 --LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              +     D  L   R R+  L   L    +  I  +      I  R+ +   +  +++
Sbjct: 300 RARRIWAGPDGLLQHQRLRVGELRERLLKAAKSDIDLRRHGLESISGRLDALSPLRVLER 359



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 3/138 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I+  RQ +   Q+ + + +++++   +       A    +       + +    + +L  
Sbjct: 267 IEALRQDLALLQRRMRRAMERNIESKWQTVDYFRAR--RIWAGPDGLLQHQRLRVGELRE 324

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTR 484
           R+       I      +   +  L + +    L+RGY  ++       +     +     
Sbjct: 325 RLLKAAKSDIDLRRHGLESISGRLDALSPLRVLERGYAVVRKPEAGEVVKGVEKVRIGEL 384

Query: 485 ILINFFDGQANAIVINKA 502
           + I   +G+    V  K 
Sbjct: 385 LEIILSEGRMTVEVKTKE 402


>gi|256384013|gb|ACU78583.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp.
           capri str. GM12]
 gi|256384845|gb|ACU79414.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp.
           capri str. GM12]
 gi|296455800|gb|ADH22035.1| exodeoxyribonuclease VII, large subunit [synthetic Mycoplasma
           mycoides JCVI-syn1.0]
          Length = 469

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 129/496 (26%), Positives = 219/496 (44%), Gaps = 37/496 (7%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +V EL+  LK ++E+      + V+GE+S       SGH YFS+K+  + I+ ++W
Sbjct: 2   EKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60

Query: 70  KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           K    KI     E+G++ +  G++T +  + +    +  +   G G L    E+R K+L 
Sbjct: 61  KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIKIHGIGDLQKIFEQRYKELE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           ++G F    K PIP   K + +IT+ +GA I D+++ I  R P + + +FP +VQGD+  
Sbjct: 121 QKGWFDPNLKKPIPEFVKNVGIITADSGAAIYDLIRTIHRRLPLINIFLFPAQVQGDKAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           K+IAN I Q N  K        D++I+ RGGGS EDLW FN+  +++AI NS IPIISA+
Sbjct: 181 KDIANKIKQANDFKVQ-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSQIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE DW L+DY AD+RA TPT A E+       +++ L +       +I+  + +    L
Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFDEKL 295

Query: 308 NSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           N+  K          S    +L +L  +     +  I        +    I +  L    
Sbjct: 296 NNYKKEQTKYIKNNFSFKYLQLKQLSIDNTKWTKNKINLVIDKLENYKQSINNSTL---- 351

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
                                   I  + K     L    ++  N +    +     I+ 
Sbjct: 352 ----------------------HIINSQNKTLKNYLIADEQKILNYLKKQISEFNYTISS 389

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
            +  ++  +K    S +     L S      L+ GY+ + + N+  I   + +     + 
Sbjct: 390 FKGHINQILKYEELSFNTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLK 449

Query: 487 INFFDGQANAIVINKA 502
           +   D +    +    
Sbjct: 450 VILTDSKLTVTIKEVK 465


>gi|294788628|ref|ZP_06753870.1| exodeoxyribonuclease VII, large subunit [Simonsiella muelleri ATCC
           29453]
 gi|294483505|gb|EFG31190.1| exodeoxyribonuclease VII, large subunit [Simonsiella muelleri ATCC
           29453]
          Length = 405

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 189/355 (53%), Gaps = 8/355 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   + ++E+ L  + + GEIS      +SGH YF+LKD H+++   +++ T  
Sbjct: 10  LSVSELNSIARQLLENQLDGLWISGEISNLT-RAASGHYYFALKDAHAQVRCALFRQTAT 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++    ++G    + GKI+ +    +YQI +  +   G G L    EK K  L  EGLF 
Sbjct: 69  RLAIPLKDGDHIELTGKISIYEARGEYQITVNDMRTLGLGDLYVRYEKLKNTLQNEGLFD 128

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
             HK  +P  P+ I ++TS   A +RD+   +  R P + +I++P  VQG    K+IA A
Sbjct: 129 SSHKKRLPEKPRAIGIVTSLAAAALRDVASTLRRRAPHIPIIVYPTPVQGAGSEKKIAQA 188

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N   E       D++++ RGGGS+EDLW FN+E++ R IA S +P +S +GHETD+
Sbjct: 189 IELANKRNE------VDVLLICRGGGSMEDLWAFNEEIVARTIAASQLPTVSGVGHETDF 242

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD+ AD+RAPTPT AAE+  P +E +   +  L  +L   I +  +     L+ L K 
Sbjct: 243 TLADFVADVRAPTPTAAAELVSPNQEEIIKHINQLYEKLQRSITQHYQNASQQLDFLAKQ 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + +  + L+  + +L+     L  N+      +     H    + +    + +Q+
Sbjct: 303 IRHPREKLNIQKQQLENFQAALSQNMAHHFAIQQTRLQHASALLNAVAPQNVLQR 357



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 57/132 (43%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           N++ I++    + + +++ +   +    +++  L       + ++      ++     + 
Sbjct: 266 NQEEIIKHINQLYEKLQRSITQHYQNASQQLDFLAKQIRHPREKLNIQKQQLENFQAALS 325

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             ++H      T +   + +L + A +N L+RG+  +Q T+   +    +L T  ++ + 
Sbjct: 326 QNMAHHFAIQQTRLQHASALLNAVAPQNVLQRGFAMVQTTHGKVVQSSGSLKTGQKLRLV 385

Query: 489 FFDGQANAIVIN 500
           F DG  +  V N
Sbjct: 386 FADGTRDVRVEN 397


>gi|153003999|ref|YP_001378324.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027572|gb|ABS25340.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 483

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 134/504 (26%), Positives = 226/504 (44%), Gaps = 57/504 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +SV EL+  LK+ VE     V V GE++  R   +SGH YFSLKD    I A++W    
Sbjct: 24  PWSVGELTRALKNAVEPKFRDVWVAGEVANLR-RQASGHVYFSLKDADGLIGAVVWASQA 82

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +++F   EG E L  G +  +    KYQ+I++ L P G+G     L++ K++L  +GL 
Sbjct: 83  RRVKFAVAEGQEVLARGFVEIYAPHGKYQLIVQELEPRGAGAAALLLQQVKERLQADGLL 142

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           +   K  +PF+P+ I V TSPTGA +RD L+ +  RFP + V++ P +VQGD     + +
Sbjct: 143 APARKRQLPFLPRRIGVATSPTGAAVRDFLRVLHTRFPSMPVLVAPCRVQGDGAASTVVS 202

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  L            D+I++ RGGGS E+L  F+DE + RAIA   +P++SA+GHE D
Sbjct: 203 AVRALCRA-------GVDVIVVTRGGGSQEELGAFDDERLARAIAACPVPVVSAVGHEVD 255

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD+RA TPT AA++  PV++ L + L  L  RL       ++ +   L +L  
Sbjct: 256 VTVADLVADVRAATPTHAAQLVAPVRDELVARLSALRGRLERTWEGALELRRRELRALRA 315

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L +  + LS +R+R+D L           +  +    + +  R+               
Sbjct: 316 ELEDPARVLSGARHRVDDLLHAAAAAARDPLRARRTRLDPLRARLA-------------- 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                                            R + + R+  +   ++    R+    +
Sbjct: 362 ---------------------------------RLEPRRRVREVRLRMEASARRLGAWQA 388

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
              +     +      L+       L RG++ +   + + I++   +A    + I   +G
Sbjct: 389 ATFRRETLRLQRLEGRLEPANMAKLLARGFSLVLR-DGHVISRSGQVAEGDALRIVLGEG 447

Query: 493 QANAIVINKAPPKEQPTKKCQLHN 516
             +A    +    +    +     
Sbjct: 448 WLDARATARDAGDDPLPGRTVPAR 471


>gi|298528345|ref|ZP_07015749.1| exodeoxyribonuclease VII, large subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511997|gb|EFI35899.1| exodeoxyribonuclease VII, large subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 448

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 130/498 (26%), Positives = 215/498 (43%), Gaps = 65/498 (13%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VSEL+  ++ +VE +   V VRG+ +       SGH YF+LKD  + +  + +K T 
Sbjct: 4   IFNVSELTAAIREVVEMHFPFVWVRGQATNV-SRPGSGHIYFTLKDEQAALQVVWFKNTQ 62

Query: 74  NKIEFL-------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
                         + G E +  G+I  +P    YQ+I E +   G G L  A E  K +
Sbjct: 63  AASRKQNSDPAASLDNGQEVICAGRIGVYPPRGTYQLIAELVQEQGLGDLFLAFEALKAR 122

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDE 185
           L +EGLF  + K  IPF P+ + +IT+PTGA ++D ++          +I++P  VQGD+
Sbjct: 123 LQQEGLFEAERKMKIPFNPERVGIITAPTGAALQDFMRVADDMGHGSEIIVYPSLVQGDK 182

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P +I  AI +           R  +++L RGGGS+EDLW FN E + RAIA S IP+I+
Sbjct: 183 APADIVRAINRACR------EDRVQVLVLMRGGGSLEDLWAFNSEEVARAIAGSHIPVIT 236

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD AADLRA TP+   +     ++ L   L   E  L     R +K +  
Sbjct: 237 GVGHEVDTTIADLAADLRAATPSHVPQHLWLQRKDLWVRLDEQEMLLVQAYKRFLKTREE 296

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L ++ + L   +  + +     +LD L + L+      +    R    + +R++  F  
Sbjct: 297 QLQNMSRGLGWLSPARQMQRREEQLDSLEQALKREGGNFLDMYMRMVQELESRLRGKFSP 356

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
              +   Q +   QQ ++                                          
Sbjct: 357 DYWEVRHQQLDYLQQTLKARAV-------------------------------------- 378

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNLATK 482
                    + ++     VS     L+S      ++RGY+ +    +  F+    +++  
Sbjct: 379 ---------NFLEDRENKVSFAAEKLESLDPYAPIRRGYSLVTVAKSGKFLRSVHDVSPG 429

Query: 483 TRILINFFDGQANAIVIN 500
             + I   DGQ  + V  
Sbjct: 430 DVLEITVIDGQIKSRVGG 447


>gi|42560660|ref|NP_975111.1| exodeoxyribonuclease VII large subunit [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|81829416|sp|Q6MUD1|EX7L_MYCMS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|42492156|emb|CAE76753.1| exodeoxyribonuclease VII large subunit [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|301320597|gb|ADK69240.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 469

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 125/499 (25%), Positives = 222/499 (44%), Gaps = 35/499 (7%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               +V EL+  LK ++E+      + V+GE+S       SGH YFS+K+  + I+ ++W
Sbjct: 2   EKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60

Query: 70  KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           K    KI     E+G++ +  G++T +  + +    +  +   G G L    E+R K+L 
Sbjct: 61  KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIQIHGIGDLQKIFEQRYKELE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           ++G F    K  IP   K + +IT+ +GA I D+++ +  R P + + +FP +VQGD+  
Sbjct: 121 QKGWFDPNLKKSIPEFVKNVGIITADSGAAIYDLIRTVHRRLPLINIYLFPAQVQGDKAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I N I Q N  K        D++I+ RGGGS EDLW FN+  +++AI NS IPIISA+
Sbjct: 181 IDITNKIKQANNFKID-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSHIPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE DW L+DY AD+RA TPT A E+       +++ L +       +I+  + +    +
Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKI 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           N+  K           ++Y  D    +     ++ I       N I + I          
Sbjct: 296 NNYKK---------DQTKYIKDNFSFKYLQLKQLSIDNTKWTKNKIDSVIY--------- 337

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                  + + +   I    +  I  + K     L    ++  N +    +     I+  
Sbjct: 338 -------KLEDYKHSINNSIIHIINSQNKALKNYLIADEQKILNYLKKQISEFNYTISSF 390

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           +  ++  +K    S       L S      L+ GY+ + + N+  I   + +     + +
Sbjct: 391 KGHINQILKYEELSFDTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLKV 450

Query: 488 NFFDGQANAIVINKAPPKE 506
              D +    +      ++
Sbjct: 451 ILTDSKLTVTIKEVKTNEQ 469


>gi|289677932|ref|ZP_06498822.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           syringae FF5]
          Length = 364

 Score =  299 bits (766), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 124/357 (34%), Positives = 201/357 (56%), Gaps = 10/357 (2%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 16  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 74  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 134 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 246

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + NL  RL + +   +
Sbjct: 247 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 306

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             +   L  + + L +  + L     RLD L   L    E  + ++     H+ +R+
Sbjct: 307 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRL 363



 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 4/78 (5%), Positives = 24/78 (30%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +  +  ++ + +   ++   + ++ ++  +         R+      +  L  R+    
Sbjct: 286 DLHRRVDNLHRRLVSRMQDRLMRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAF 345

Query: 432 SHKIKSCHTSVSITTRIL 449
              +      ++     L
Sbjct: 346 EQNMHQRQVRLAHMQSRL 363


>gi|326201954|ref|ZP_08191824.1| exodeoxyribonuclease VII, large subunit [Clostridium papyrosolvens
           DSM 2782]
 gi|325987749|gb|EGD48575.1| exodeoxyribonuclease VII, large subunit [Clostridium papyrosolvens
           DSM 2782]
          Length = 404

 Score =  299 bits (765), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 221/378 (58%), Gaps = 12/378 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K +V  +L  S V +RGEIS ++  H +GH YF++KD +S +  +++K 
Sbjct: 4   VYSVSDINNYIKQLVSRDLILSDVSIRGEISNFKH-HYTGHMYFTIKDENSLLKCVMFKS 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F PE G++ +V G I+ F    +YQ+   ++ P G G L  A E+ K+KL +EG
Sbjct: 63  QAIALRFAPENGMKVIVSGYISVFERDGQYQLYASNMQPDGVGALHVAFEQLKEKLQQEG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  + K  IP +P  I ++TS TGAVIRDI+     R   ++++++PV VQG +   +I
Sbjct: 123 LFDLEKKKSIPLLPGSIGIVTSSTGAVIRDIINVTYRRNSKMKLVLYPVAVQGPQAAGQI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           + AI +LN         + D+II+ARGGGS+E+LW FN+E++ R+I  S+IP+ISA+GHE
Sbjct: 183 SEAIKRLN------EHNKVDVIIVARGGGSLEELWAFNEEIVARSIYASNIPVISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T++D+ +D+RAPTP+ AAE+AVP  E L   L +   R+ N +++ +    N L  +
Sbjct: 237 TDFTISDFVSDMRAPTPSAAAELAVPDIEVLLYKLESYNMRMKNSLVKKVTALQNQLQKI 296

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                       ++  R  +D L + L    + II  K   F  +  ++ +   +  +++
Sbjct: 297 NSRPSFTQPYDRVNQQRQAIDNLVKNLVRENQAIIKDKKSQFGILAGKLDALSPLKIMER 356

Query: 369 NRQHILEKQQHIEQIVKQ 386
               +   Q H+   VKQ
Sbjct: 357 GYGVVKNSQGHVVNSVKQ 374



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%)

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            L+ + +         Q  +R+      I  L+  +       IK   +   I    L +
Sbjct: 288 ALQNQLQKINSRPSFTQPYDRVNQQRQAIDNLVKNLVRENQAIIKDKKSQFGILAGKLDA 347

Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +    ++RGY  ++++  + +   + +    ++ I   DG A   V +    K
Sbjct: 348 LSPLKIMERGYGVVKNSQGHVVNSVKQVNAGDKLEILINDGLAECDVTSVREGK 401


>gi|315223296|ref|ZP_07865157.1| exodeoxyribonuclease VII, large subunit [Streptococcus anginosus
           F0211]
 gi|315187728|gb|EFU21482.1| exodeoxyribonuclease VII, large subunit [Streptococcus anginosus
           F0211]
          Length = 446

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 152/500 (30%), Positives = 234/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW
Sbjct: 2   SEYLSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  GGVYKKLGFDLEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RF  + +I++P KVQG+    
Sbjct: 120 EGLFEERFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFSGVEIILYPTKVQGEGASA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++G
Sbjct: 180 EVAENIRRANER------NDLDVLIIGRGGGSIEDLWAFNEEVVVRAIFESHIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L + L   + RL   +   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLAHLQQQQNRLAAAMSNRLTYNRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 AKLSQSVIFRQPERLYDSYLQKLDQLNLRLKQKIREYYNEEVQRVRLLQHRLEALAPLRQ 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q  ++ + + ++ +   +     +   E K                             
Sbjct: 354 VQICQERVAQLERLLRSNMAVVYDHKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++  +   +     +  K ++
Sbjct: 386 -------------------LSDALLMLDTSRIVARGYAIVK-KDEQVLESIEKVNKKDQL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            I   DGQ    V +    +
Sbjct: 426 TILMRDGQIEVEVKDVERKE 445


>gi|313200721|ref|YP_004039379.1| exodeoxyribonuclease VII large subunit [Methylovorus sp. MP688]
 gi|312440037|gb|ADQ84143.1| exodeoxyribonuclease VII, large subunit [Methylovorus sp. MP688]
          Length = 400

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 8/356 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V+EL+   +  +E       V GEIS      +SGH YFSLKD  +++  ++++G  
Sbjct: 8   ILTVTELNRLARDTLERAFPLFWVSGEISNLT-RAASGHWYFSLKDAGAQVRCVMFRGRN 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + +++ P EG +      +T +     +Q+ IE L  +G GTL  A EK K KL  EGLF
Sbjct: 67  SYLDWQPREGDKVEARALVTLYEARGDFQLTIEFLQRAGLGTLFEAFEKLKAKLQAEGLF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K PIP  P+ I ++TSP  A +RD+L  +  R P L VII+P  VQG     +IA 
Sbjct: 127 DAALKRPIPAHPQRIGIVTSPDAAALRDVLSTLRRRMPSLEVIIYPTPVQGKGAAAQIAA 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   +   E       D++I+ RGGGS+EDLW FN+E++ RAI   S+P+IS +GHETD
Sbjct: 187 AIETASARAE------VDVLIVCRGGGSMEDLWQFNEEIVARAIHGCSMPVISGVGHETD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+AAD+RA TPT AAE+    ++ L  +   L  RL+  + +L+  ++  ++ L +
Sbjct: 241 FTIADFAADVRAATPTAAAELVSADRQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTR 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L +  Q ++   ++L +    L+  +   + R+ R    +   +        + +
Sbjct: 301 RLLSPSQQIAHRGHQLQQWQWRLQQAMRQKLDRQTRQLQTLQQNLVHLNPQAILSR 356



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 50/134 (37%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           RQ +L+ Q  + + + + ++ +  ++ + +  L         +I +    +++   R++ 
Sbjct: 266 RQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTRRLLSPSQQIAHRGHQLQQWQWRLQQ 325

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  K+      +    + L     +  L RGYT     + + +   + L     I +  
Sbjct: 326 AMRQKLDRQTRQLQTLQQNLVHLNPQAILSRGYTLAYAEDGSLLKSVQTLQKGKGITLQL 385

Query: 490 FDGQANAIVINKAP 503
            DG     V    P
Sbjct: 386 SDGLVKTTVDQVHP 399


>gi|239907071|ref|YP_002953812.1| exodeoxyribonuclease VII large subunit [Desulfovibrio magneticus
           RS-1]
 gi|239796937|dbj|BAH75926.1| exodeoxyribonuclease VII large subunit [Desulfovibrio magneticus
           RS-1]
          Length = 473

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 124/524 (23%), Positives = 218/524 (41%), Gaps = 75/524 (14%)

Query: 9   SLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +   P  + V+EL+  LK +VES    V VRG++        SGH YFSL+D  + +  +
Sbjct: 2   TTTMPHVFEVAELTRALKSVVESEFPFVWVRGQVVNL-SRPGSGHVYFSLRDAEASLGVV 60

Query: 68  IWKGTLNK--------------------IEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            +KG                        +  L  +G+E +V G++T +P    YQ++ E 
Sbjct: 61  WFKGAQAGRVTPGGERYDPLTGEVLERPLAGLLADGMEVMVAGRLTVYPPRGTYQLVAEV 120

Query: 108 LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167
           +   G+G L    E+ KK+L  +G F    K P+P  P  +AV+T+PTGA +RD ++   
Sbjct: 121 VQEVGAGRLWLEFEELKKRLAAKGYFDAARKRPLPPHPTRVAVVTAPTGAAVRDFIRIGR 180

Query: 168 CR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226
            R    +V ++P  VQG+  P  I  A+L+             ++++L RGGGS+EDLW 
Sbjct: 181 ERGHGAQVRVYPTLVQGEAAPAGIVRAMLRAVADDWA------EVLVLIRGGGSLEDLWA 234

Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           FN E + +AI  + +P++  +GHE D T+AD  AD+RA TP+ AA++  P +  L   L 
Sbjct: 235 FNTEEVAKAIYAAPLPVLVGVGHEVDVTIADMVADVRAATPSHAAQLLWPERGMLAQRLD 294

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
           + E  L   I  L+  +   L +L + L            RL RL        + ++   
Sbjct: 295 DAEMSLRRQIGSLVSLRERELAALARGLSWLSP-----ARRLARLEDAFVVGEKRLLRAA 349

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
               + +                 + +   +  + +      R+       +   L   +
Sbjct: 350 AARLDGLS----------------RRLDNLEARLAR------RFDRQSLDARDDALTRRK 387

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
           E+                  I   +   +      + +    L        L RGY+   
Sbjct: 388 ER------------------ITAGMRLYLADRQGRLDVAAMRLAGLDPAAPLARGYSLTT 429

Query: 467 -DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509
                 F+ ++ ++    ++ +  ++G+  A+V    P   +  
Sbjct: 430 VLRTGKFLRREGDVRPGDKLDVMVYEGRVRAVVSQDGPDDGEQP 473


>gi|317122008|ref|YP_004102011.1| exodeoxyribonuclease VII large subunit [Thermaerobacter marianensis
           DSM 12885]
 gi|315591988|gb|ADU51284.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter marianensis
           DSM 12885]
          Length = 459

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 215/380 (56%), Gaps = 12/380 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
                   P  +VSEL+  ++  +E++  L  V VRGEI+  +  HSSGH YF+L+D  +
Sbjct: 25  PWAAGAPAPVLTVSELTARIRQRLETDARLRQVWVRGEINSCK-RHSSGHLYFTLQDEGA 83

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +  ++++     + F PE+G+E +  G++  +  +  YQ+ +++L P+G G L  ALE+
Sbjct: 84  TLRCVMFRSAARHLTFTPEDGMEVIAQGRVGVYEPAGTYQLYVDALEPAGLGALYLALEQ 143

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
           R+++L  EGLF  Q K P+P  P+ I V+TS  GA +RDIL+    R P LRV++ PV V
Sbjct: 144 RRRRLAREGLFDPQRKRPLPPFPRCIGVVTSADGAALRDILRVALGRHPRLRVVVAPVPV 203

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+   + IA AI + N           D++I+ RGGG+ EDLW FN+E++VRA+A+S I
Sbjct: 204 QGEGAAEAIAAAIARFNR------WGGADVLIVGRGGGAREDLWTFNEEVVVRAVASSRI 257

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SA+GHE D TL D AAD+RAPTP+ AA +AVP    L++ L  L  RL   + R ++
Sbjct: 258 PVVSAVGHEIDVTLCDLAADVRAPTPSAAAALAVPELGRLEARLAELAGRLEGAVRRRLE 317

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                L+ L +   L +  Q +   R RL  L ++L       +  + R    +  R+++
Sbjct: 318 QARQRLDELARRPGLRHPAQQVQAWRQRLRELQQDLTRAAVWRVAGERRRLEGLAGRLEA 377

Query: 360 DFLIHNIQKNRQHILEKQQH 379
              +  +++      + +  
Sbjct: 378 LSPLAVLRRGYSITRDAEGR 397



 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 56/183 (30%), Gaps = 8/183 (4%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQI---VKQHLRYIFLEKKEKIAILHML--RE 407
           +   +++             +   +  + ++   ++  +R    + ++++  L       
Sbjct: 274 LAADVRAPTPSAAAALAVPELGRLEARLAELAGRLEGAVRRRLEQARQRLDELARRPGLR 333

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
               ++      +++L   +      ++      +      L++ +    L+RGY+  +D
Sbjct: 334 HPAQQVQAWRQRLRELQQDLTRAAVWRVAGERRRLEGLAGRLEALSPLAVLRRGYSITRD 393

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT--- 524
                +T    +     I +    G+  A V    P       +         ++     
Sbjct: 394 AEGRVLTDATAVTPGQAIEVLLARGRLEAEVRAVHPGAAGVAAEETTPATPSNREEGTWK 453

Query: 525 QGE 527
           QG 
Sbjct: 454 QGS 456


>gi|326693829|ref|ZP_08230834.1| exodeoxyribonuclease VII, large subunit [Leuconostoc argentinum
           KCTC 3773]
          Length = 426

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 149/499 (29%), Positives = 222/499 (44%), Gaps = 82/499 (16%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64
           S      ++  L+ +LK   +++  L  V V GEIS   G     H YFS+KD    + I
Sbjct: 2   SESEKYLTIRALTAYLKRKFDADPYLEKVYVTGEISNL-GRRRGRHLYFSIKDPEGQAVI 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            A ++    N+++F+PEEG++   +G+I  +  S  Y II+E + P G G L  A E+ K
Sbjct: 61  SAAMF-SYANRLKFVPEEGMKVNAVGRIQVYEPSGTYSIILEQMTPDGIGELFLAYEQLK 119

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183
           KKL  EGLF    + P+P  PK IAV+TSPTGAVI DI + +  RFP+ +V++FP  VQG
Sbjct: 120 KKLAAEGLFQLPKR-PLPVFPKKIAVVTSPTGAVIEDIARTVQRRFPMAQVVLFPALVQG 178

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D+    +   I +++           D +I+ RGGG+IEDLW FNDE + R IA + IPI
Sbjct: 179 DKAAASVVKQIKRIDA------SGDYDTLIVGRGGGAIEDLWAFNDETLARTIAAAKIPI 232

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           IS++GHETD TLAD  AD RA TPT AAE+A PV                          
Sbjct: 233 ISSVGHETDNTLADLVADHRAATPTAAAELATPVT------------------------- 267

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                            L+    RL+ L   L   ++ +I  + +    +  R       
Sbjct: 268 -----------------LAQLVARLNELQLRLTVRMKALITSRQQRLARVAQRPIFQQPD 310

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                  Q + +  Q +                          +Q + RI      +  L
Sbjct: 311 RLYVGYNQRVDQLSQRL-------------------------IQQMQQRIVTAQHQLDNL 345

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R   +    +++    V + T  L   +    L RGY  +    +  +     L  + 
Sbjct: 346 TQRQRQLRQILLQAPREKVQLLTAKLDLMSPLKILTRGY-VVLSKADQVVRHIDELQPED 404

Query: 484 RILINFFDGQANAIVINKA 502
           R+ +   DGQA A +I  +
Sbjct: 405 RVTVRLADGQATAKIIETS 423


>gi|157736686|ref|YP_001489369.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri RM4018]
 gi|157698540|gb|ABV66700.1| exodeoxyribonuclease VII, large subunit [Arcobacter butzleri
           RM4018]
          Length = 395

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 205/364 (56%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           ++ P  SVS L+  +K ++E+    V V GEIS     H+SGH YFS+KD +S +  +++
Sbjct: 1   MNSPI-SVSTLNLQIKSLLETTFIQVYVEGEISNLT-YHNSGHIYFSIKDENSTLSCVMF 58

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG    ++F  E G++ ++ G +T +     YQ++   + PSG G+L  A E+ K KL  
Sbjct: 59  KGNTKYLKFQLENGLKIVITGSLTVYAPRGNYQLLCNKIEPSGIGSLSLAFEQLKTKLEA 118

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G F    K  +P  PK IA++TSPTGA I D+ +  + R+  +  I+ P  VQG+    
Sbjct: 119 KGYFERSRKKTLPRYPKKIAIVTSPTGAAIEDMKKVATHRWSLVEFILIPTLVQGEGASL 178

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IAN+I   + L         DI+I+ RGGGSIEDLW FN+E++  AI  +  PIISA+G
Sbjct: 179 DIANSIKYADKL-------NCDIMIVGRGGGSIEDLWAFNEEIVANAIYEAKTPIISAVG 231

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+ ++D+ AD+RA TP+ A E+A+P     +  L +LE  + N    ++  K   L 
Sbjct: 232 HEVDYLISDFVADIRAATPSNAIEIALPDINEHRIYLDSLENEITNRFKNILFNKEQELK 291

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           ++ K       ++      +      ++ +L+I + +K+  + + I+ +KS++L ++  K
Sbjct: 292 NMKKLFEQ--NSIETKFNFIQTQINFIKSSLKINLNQKFLSYQNQIDLLKSNYLSNHPDK 349

Query: 369 NRQH 372
             ++
Sbjct: 350 KEKN 353



 Score = 42.4 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I ++R ++   +  I    K  L     E K    +    +   + +  ++ T I  + +
Sbjct: 261 INEHRIYLDSLENEITNRFKNILFNKEQELKNMKKLFE--QNSIETKFNFIQTQINFIKS 318

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            ++  L+ K  S    + +      S       K G+  I   +N  I    +L     I
Sbjct: 319 SLKINLNQKFLSYQNQIDLLKSNYLSNHPDKKEKNGFVQI-SKSNKVI-NLADLKIGDEI 376

Query: 486 LIN 488
            + 
Sbjct: 377 ELQ 379


>gi|296186629|ref|ZP_06855031.1| exodeoxyribonuclease VII, large subunit [Clostridium
           carboxidivorans P7]
 gi|296048666|gb|EFG88098.1| exodeoxyribonuclease VII, large subunit [Clostridium
           carboxidivorans P7]
          Length = 399

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 129/359 (35%), Positives = 209/359 (58%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VSEL+ ++K +V+++    +  V+GEIS ++ +HSSGH YFS+KD +S+I+ ++++ +
Sbjct: 6   LTVSELNGYIKKLVDNDFILGNSNVKGEISNFK-LHSSGHIYFSIKDEYSKINCVMFRSS 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              ++F+PE G++ +V G+++ +     YQI    +   G G L  A EK K KL  +GL
Sbjct: 65  ARNLKFMPENGMKVVVKGRVSVYEKDGAYQIYCNDIELDGVGELYMAFEKLKSKLQSQGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F   HK  IP   + I V+TSPTGA +RDI+     R   + ++I+P  VQG    + I 
Sbjct: 125 FEVTHKKEIPPYARKIGVVTSPTGAAVRDIINVAKRRNDAVELLIYPALVQGINASESII 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI  LN +         D+IILARGGGSIE+LW FNDE +  +I NS   II+ +GHET
Sbjct: 185 KAIEYLNRI------DDIDVIILARGGGSIEELWCFNDEKLAYSIYNSKKAIITGVGHET 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ D+ +D RAPTP+ AAE+AV   E LQS +++ +  LNN+I  ++K K N+L  L 
Sbjct: 239 DYTIVDFVSDRRAPTPSAAAELAVFNLEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLK 298

Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + L   +    +      +DRL   +   ++  + ++        + + +   ++ + K
Sbjct: 299 RNLDVNSPYSYIVNEYNNIDRLKELMNIKIKTRLEKEREKLIKANSLLTAHNPMNILNK 357



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 5/141 (3%)

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNR 412
           ++       +    ++ + Q  I          I    KEK   L +L+         + 
Sbjct: 250 RAPTPSAAAELAVFNLEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLKRNLDVNSPYSY 309

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           I   + +I +L   +   +  +++     +     +L +    N L +GY  I++     
Sbjct: 310 IVNEYNNIDRLKELMNIKIKTRLEKEREKLIKANSLLTAHNPMNILNKGYAVIENEKIGV 369

Query: 473 ITQKRNLATKTRILINFFDGQ 493
           +   +NL    ++ I   DG 
Sbjct: 370 VNTIQNLKKLDKVKITLKDGS 390


>gi|258515787|ref|YP_003192009.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779492|gb|ACV63386.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 400

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 132/359 (36%), Positives = 209/359 (58%), Gaps = 13/359 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVSEL+ ++K+ +E++  L+++ V+GEIS ++    SGH YF+LKDN+S I  ++++   
Sbjct: 6   SVSELNSYIKNNLENDSKLANIWVKGEISNFK-RAFSGHLYFTLKDNNSLIKTVMFRSRA 64

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PE G+  +V G I+ +     YQ+  E + P G G L  A E+ K+KL  EGLF
Sbjct: 65  LRLLFNPENGMSIIVRGYISVYERDGAYQLYAEEMEPDGIGALYVAFEQLKQKLEHEGLF 124

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             +HK  +P +P  +A++TSP GA IRDI   I  R+P + +++ P  VQG++ P EIA 
Sbjct: 125 DKRHKKNLPMLPGRVAIVTSPVGAAIRDITGIIQRRWPGMEMVLVPAAVQGNDAPAEIAR 184

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I  LN L         D+II+ RGGGSIE+LW FN E++ R+I  S +P+ISA+GHETD
Sbjct: 185 GIELLNRL------GGIDVIIVGRGGGSIEELWAFNTELVARSIFASDVPVISAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310
           +T+AD  AD+RA TP+ AAE+ VP K  +Q  L +L ARL   +   I    + L     
Sbjct: 239 FTIADLVADVRAATPSAAAEIVVPDKIEMQRYLESLGARLYYAVQDDISLNRSKLERFMK 298

Query: 311 LKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +      +  +R   +DR+   L   ++ +I R       +  ++++   +  + +
Sbjct: 299 SRVMQQPVAVICETRGQAVDRITERLNKAIKELIARDRNRLALLAGQVQALSPLATLSR 357



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 49/135 (36%), Gaps = 2/135 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + ++++      +   V+  +     + +  +    M ++            + ++  R+
Sbjct: 266 EMQRYLESLGARLYYAVQDDISLNRSKLERFMKSRVM-QQPVAVICETRGQAVDRITERL 324

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRIL 486
              +   I      +++    +Q+ +   TL RGY+   +  +   I+  R +    ++ 
Sbjct: 325 NKAIKELIARDRNRLALLAGQVQALSPLATLSRGYSICTEHGSKEIISDIRQIEIGEKLD 384

Query: 487 INFFDGQANAIVINK 501
           +   +G+    V  K
Sbjct: 385 VQLKNGKLLCEVRKK 399


>gi|227893298|ref|ZP_04011103.1| exodeoxyribonuclease VII (large subunit) [Lactobacillus ultunensis
           DSM 16047]
 gi|227864878|gb|EEJ72299.1| exodeoxyribonuclease VII (large subunit) [Lactobacillus ultunensis
           DSM 16047]
          Length = 450

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 141/502 (28%), Positives = 250/502 (49%), Gaps = 59/502 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +    +V++L+Y++    +++  L  V ++GE+S +R   +S H YFSLKD  S+I+ +
Sbjct: 2   TEDKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++   +K++F PEEG++  V+G ++ +     YQ   ES+ P+G G L   L++ + KL
Sbjct: 61  MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAESMEPAGLGALYEQLKQLQAKL 120

Query: 128 LEEGLF-SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
            +EGLF + +HK  +P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQGD 
Sbjct: 121 AKEGLFTNPEHKKKLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDT 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               + +A+ Q+          + D++I+ RGGGS+EDLW FN+E +VR +   ++P+IS
Sbjct: 181 AADSLVSAMQQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMTMPVIS 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           ++GHETD TL D  AD RA TPT AAE A P      + +  L +RL + +  +I+ + +
Sbjct: 236 SVGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIRERRD 295

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            LN +     +    +        +DRL + L+++++  + R  + +  +  R+ S    
Sbjct: 296 RLNRIKNSVIMREPTRLYDQQIETVDRLKQRLDNSMKNQLNRSNQSYQLLKQRLLSVNPD 355

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + +Q      + +   ++                                      
Sbjct: 356 KQVHQVKQQEQFLIKRLVDNMQ-------------------------------------- 377

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                    H +K   +  +   + L  ++   TL+RG+    D     I+  + + TK 
Sbjct: 378 ---------HYLKDKRSGFAKVVQQLDDYSPLKTLERGFVYTTDEQGRTISSIKQVKTKD 428

Query: 484 RILINFFDGQANAIVINKAPPK 505
           ++ ++F DGQA AIV      K
Sbjct: 429 QLNLHFKDGQAVAIVTKTKEDK 450


>gi|294340374|emb|CAZ88755.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Thiomonas sp. 3As]
          Length = 457

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 136/487 (27%), Positives = 223/487 (45%), Gaps = 58/487 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            ++VS L       + +  + + VRGEISG     +SGH YF+LKD  +++  + ++   
Sbjct: 10  VWTVSALVQAFSDALNARFNSLSVRGEISGLV-RAASGHQYFNLKDGTAQLRCVWFRQRA 68

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
                   +G+   +   +  +      Q+I+ES+ P G G LL A  + K KL  EGLF
Sbjct: 69  GSAATALRDGMSVRLRATVAIYEPRGDLQLIVESVQPDGEGALLEAFLRLKAKLQIEGLF 128

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             + K P+P +P+ + VITS   A +RD+L  +  R P +RV+++P  VQG   P E+  
Sbjct: 129 DPERKRPLPALPQAVGVITSLQAAALRDVLTTLRRRSPHVRVVVYPASVQGAAAPGELLA 188

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+ +    +E       D+I+L RGGGS++DLW FNDE + RAIA S++P+IS +GHETD
Sbjct: 189 ALQRAQARRE------VDLILLVRGGGSLDDLWAFNDEALTRAIAASTLPVISGVGHETD 242

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+ ADLRAPTPT AAE+ VP +  L  +L +   R ++ + R ++ +    + L  
Sbjct: 243 FTLADFVADLRAPTPTAAAELGVPAQAALLDALTHTAHRASSALSRHLQREQQRCDRLAL 302

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
             P     L+  +  L +L   L   L  +     +    + +R+ +  L     + R+ 
Sbjct: 303 RWPQPAALLAAPQRHLAQLQWRLRQALNDLPRLHAQRLQLLQHRL-AHALRQRAPRERER 361

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ + + +                                   I     R++    
Sbjct: 362 LNRCERSLPEAL--------------------------------SRQISNSQLRLDRAAQ 389

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           H               LQ  + + TL RGY    + N   +     LA +  +L    D 
Sbjct: 390 H---------------LQLLSPRATLARGYLLGMNANGQVLRDLTQLAPQQPLL--LADA 432

Query: 493 QANAIVI 499
           Q    + 
Sbjct: 433 QRAVRID 439


>gi|325509497|gb|ADZ21133.1| exodeoxyribonuclease VII large subunit [Clostridium acetobutylicum
           EA 2018]
          Length = 399

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 140/362 (38%), Positives = 211/362 (58%), Gaps = 12/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVSEL+ ++K +V+S+  LS+  V+GEIS ++  HSSGH YFSLKD   +I+ I++
Sbjct: 3   IKVLSVSELNNYIKRVVDSDYILSNAQVKGEISNFKF-HSSGHVYFSLKDEGGKINCIMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    K++F+PE G++  V G+++ +     YQ+    + P G G L  A EK K+KLL 
Sbjct: 62  RSNAEKLKFIPENGMKVNVKGRVSVYVKDGAYQLYCTEITPEGRGELYEAFEKLKEKLLN 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EG+FS++HK  IP  PK+I VITSPTGA IRDI+   + R   + +II P  VQG   P 
Sbjct: 122 EGMFSEEHKRNIPKYPKMIGVITSPTGAAIRDIINVATRRNKSVDMIICPTLVQGVNAPG 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+  A+  LN  ++       D IILARGGGSIE+LW FNDE +  A+ NS  P+++ +G
Sbjct: 182 ELIKALDYLNNRED------IDTIILARGGGSIEELWAFNDEKLAYAVYNSKKPVVTGVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+ D+ +D RAPTP+ AAE+AVP      +S ++L+  L+  I   I+ K N L 
Sbjct: 236 HETDFTIVDFVSDRRAPTPSAAAEIAVPNINEEMNSFVSLKRALDTSIKTYIQNKCNQLE 295

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
              + L   + +  +      +D     L+  +   I  +        + +KS+  I+ +
Sbjct: 296 IAKRMLEKNSPEILIVNGYSSIDNFKYVLDMRIANKIKIEKEKILRYNSILKSNSPINIL 355

Query: 367 QK 368
            K
Sbjct: 356 NK 357



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           NI +     +  ++ ++  +K +++      + +IA   + +   +  I   ++ I    
Sbjct: 264 NINEEMNSFVSLKRALDTSIKTYIQNK--CNQLEIAKRMLEKNSPEILIVNGYSSIDNFK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             ++  +++KIK     +     IL+S +  N L +GY+ I D   N I+    L  + +
Sbjct: 322 YVLDMRIANKIKIEKEKILRYNSILKSNSPINILNKGYSIISDEIGNNISNVDKLKEQDK 381

Query: 485 ILINFFDGQANAIVI 499
           + I F DG+ NA + 
Sbjct: 382 VHITFKDGKVNAKID 396


>gi|15895352|ref|NP_348701.1| exodeoxyribonuclease VII large subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|22095674|sp|Q97HD0|EX7L_CLOAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|15025070|gb|AAK80041.1|AE007710_11 Exonuclease VII, large subunit [Clostridium acetobutylicum ATCC
           824]
          Length = 399

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 140/362 (38%), Positives = 211/362 (58%), Gaps = 12/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SVSEL+ ++K +V+S+  LS+  V+GEIS ++  HSSGH YFSLKD   +I+ I++
Sbjct: 3   IKVLSVSELNNYIKRVVDSDYILSNAQVKGEISNFKF-HSSGHVYFSLKDEGGKINCIMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    K++F+PE G++  V G+++ +     YQ+    + P G G L  A EK K+KLL 
Sbjct: 62  RSNAEKLKFIPENGMKVNVKGRVSVYVKDGAYQLYCTEITPEGRGELYEAFEKLKEKLLN 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EG+FS++HK  IP  PK+I VITSPTGA IRDI+   + R   + +II P  VQG   P 
Sbjct: 122 EGMFSEEHKRNIPKYPKMIGVITSPTGAAIRDIINVATRRNKSVDMIICPTLVQGVNAPG 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+  A+  LN  ++       D IILARGGGSIE+LW FNDE +  A+ NS  P+++ +G
Sbjct: 182 ELIKALDYLNNRED------IDTIILARGGGSIEELWAFNDEKLAYAVYNSKKPVVTGVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+ D+ +D RAPTP+ AAE+AVP      +S ++L+  L+  I   I+ K N L 
Sbjct: 236 HETDFTIVDFVSDRRAPTPSAAAEIAVPNINEEMNSFVSLKRALDTSIKTYIQNKCNQLE 295

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
              + L   + +  +      +D     L+  +   I  +        + +KS+  I+ +
Sbjct: 296 IAKRMLEKNSPEILIVNGYSSIDNFKYVLDMRIANKIKIEKEKILRYNSILKSNSPINIL 355

Query: 367 QK 368
            K
Sbjct: 356 NK 357



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 2/135 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           NI +     +  ++ ++  +K +++      + +IA   + +   +  I   ++ I    
Sbjct: 264 NINEEMNSFVSLKRALDTSIKTYIQNK--CNQLEIAKRMLEKNSPEILIVNGYSSIDNFK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             ++  +++KIK     +     IL+S +  N L +GY+ I D   N I+    L    +
Sbjct: 322 YVLDMRIANKIKIEKEKILRYNSILKSNSPINILNKGYSIISDEIGNNISNVDKLKEPDK 381

Query: 485 ILINFFDGQANAIVI 499
           + I F DG+ NA + 
Sbjct: 382 VHITFKDGKVNAKID 396


>gi|291532855|emb|CBL05968.1| exodeoxyribonuclease VII, large subunit [Megamonas hypermegale
           ART12/1]
          Length = 400

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 203/364 (55%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+VS+L+ +L+   + +  L ++ ++GEIS ++  HSSGH YF+LKDN + I  +
Sbjct: 1   MAEKIYTVSQLNKYLRQQFDDDIILQNIMLKGEISNFKV-HSSGHCYFTLKDNLASIKCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
            ++    K  F P+ G++ +  G I+ +     YQ+ ++SL P G G L  A E+ K KL
Sbjct: 60  AFRFNAMKFRFAPQNGMKVIASGYISIYEKDGLYQLYVQSLAPEGIGELALAFEQLKNKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF  ++K  +PF PK I V+TS TGAVI+DI      R P ++++++ V VQG+  
Sbjct: 120 NDEGLFDSKYKKQLPFYPKRIGVVTSRTGAVIKDICHVAKRRNPLVKILLYSVLVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            KEI   I   N           D+II+ RGGGS+EDLW FN+E ++RAI  S IPIISA
Sbjct: 180 SKEIVQGIEFFNKKCP------VDVIIIGRGGGSLEDLWAFNEENVIRAIFASKIPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+TL+D  +D+RA TP+ AAE+AV  KE L + + +L+         L   K N 
Sbjct: 234 VGHETDYTLSDLTSDVRAATPSQAAELAVVEKEALVNYIESLKRDCRYKAYNLFSIKENK 293

Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            N         + ++ L   +  LD L   L   +      K+     I  ++K    ++
Sbjct: 294 FNLLWKHSIFSDKERLLQSRQQELDFLNERLNKVVTDKYVNKFHQMEVIAEKLKVLNPLN 353

Query: 365 NIQK 368
            +Q+
Sbjct: 354 VLQR 357



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 17/164 (10%), Positives = 62/164 (37%), Gaps = 6/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKN---RQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
                  + + + +++       +     ++ ++   + +++  +     +F  K+ K  
Sbjct: 236 HETDYTLSDLTSDVRAATPSQAAELAVVEKEALVNYIESLKRDCRYKAYNLFSIKENKFN 295

Query: 401 IL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +L  H +    +  +      +  L  R+  +++ K  +    + +    L+     N L
Sbjct: 296 LLWKHSIFSDKERLLQSRQQELDFLNERLNKVVTDKYVNKFHQMEVIAEKLKVLNPLNVL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +RG++ ++  ++ +I   +++     + I   DG     ++   
Sbjct: 356 QRGFSIVK-QDDKYIKNIKDIDMNKSLNIELSDGTVETKIVQIK 398


>gi|187250465|ref|YP_001874947.1| exonuclease VII, large subunit [Elusimicrobium minutum Pei191]
 gi|186970625|gb|ACC97610.1| Exonuclease VII, large subunit [Elusimicrobium minutum Pei191]
          Length = 396

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 10/360 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           +  ++V+E+S  +K ++E  L+ V V GEISG +   +SGH YF +KD ++ I A+++KG
Sbjct: 6   NKIFTVTEISSSIKEMLEGVLNDVRVEGEISGLK-KAASGHIYFDIKDENALISAVLFKG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              +     ++G++ LV G ++ +    +YQII++SL+P+  G L    E+ K+KL  EG
Sbjct: 65  YALR-TADLKDGLKVLVRGDLSCYIKQGRYQIIVKSLVPTSVGDLYLEFERLKQKLAAEG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F ++ K P+P     I V+TSPTGA ++DIL  +  R P L VII P  VQG E P +I
Sbjct: 124 IFDEERKRPLPEFASRIGVVTSPTGAALQDILSVLKRRSPNLEVIISPSLVQGQEAPAQI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI +LN +      P PD+I++ RGGGS+EDLW FNDE + RAI  S IP++S +GHE
Sbjct: 184 VKAIERLNKI-----NPAPDVILVGRGGGSMEDLWCFNDEAVARAIYKSKIPVVSCVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LN 308
           TD+T+AD+A+DLRAPTP+ AAE+       + + +  L  R+ N    LI    N   + 
Sbjct: 239 TDFTIADFASDLRAPTPSAAAEIVAQNSAGVANYVTQLVKRMINTQNLLISLAQNRLNIA 298

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              K L +    L+      D L   L+   +  I       + + +++ +      +++
Sbjct: 299 MSNKFLKDPLFYLNQREQETDDLTALLDRAFKDKIKAADNALSMLTHKLNALSPGAVLKR 358



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 6/159 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL-----EKKEK 398
                      + +++       +   Q+      ++ Q+VK+ +    L     + +  
Sbjct: 237 HETDFTIADFASDLRAPTPSAAAEIVAQNSAGVANYVTQLVKRMINTQNLLISLAQNRLN 296

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           IA+ +   +     +         L   ++     KIK+   ++S+ T  L + +    L
Sbjct: 297 IAMSNKFLKDPLFYLNQREQETDDLTALLDRAFKDKIKAADNALSMLTHKLNALSPGAVL 356

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           KRG++ ++      +     +     + I  + G     
Sbjct: 357 KRGFSIVR-KQGRPVKNAEEVNKGDILDIELYKGNIQTE 394


>gi|195977753|ref|YP_002122997.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|226697610|sp|B4U1W7|EX7L_STREM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|195974458|gb|ACG61984.1| probable exodeoxyribonuclease VII large subunit XseA [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 446

 Score =  297 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 136/494 (27%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV++L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G+I  +  +  Y IIIE   P G G L    E+ ++KL  EG 
Sbjct: 63  YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSIIIEKAEPDGIGALALQFEQLRQKLAGEGF 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P     + V+TSP+GAVIRDI+  IS RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDERHKQALPQFVTKVGVVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 183 ANIARANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309
           D TLAD+ AD RA TPT AAE+A P+ +    S I  +   +         +        
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQNRSYQACLRYIRQGQERVDKL 296

Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       RLDRL   L    +  +    +    + +R+ S  +   +++
Sbjct: 297 SYSVMFRQPERLYDAYSQRLDRLTTSLMTTFKETLSEAKQEHLILEHRLASVNVQARLER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + +   +           +                                
Sbjct: 357 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  ++  +       +++     + I 
Sbjct: 386 ----------------AQAALLSLDTSRIIARGYALLK-KDGAVAACVKDIKKGDHLSIV 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V +  
Sbjct: 429 MRDGQLEVEVEDVN 442


>gi|315635856|ref|ZP_07891118.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri JV22]
 gi|315479835|gb|EFU70506.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri JV22]
          Length = 395

 Score =  297 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 205/364 (56%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           ++ P  SVS L+  +K ++E+    V V GEIS     H+SGH YFS+KD +S +  +++
Sbjct: 1   MNSPI-SVSTLNLQIKSLLETTFIQVYVEGEISNLT-YHNSGHIYFSIKDENSTLSCVMF 58

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           KG    ++F  E G++ ++ G +T +     YQ++   + PSG G+L  A E+ K KL  
Sbjct: 59  KGNTKYLKFQLENGLKIVITGSLTVYAPRGNYQLLCNKIEPSGIGSLSLAFEQLKTKLEA 118

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G F    K  +P  PK IA++TSPTGA I D+ +  + R+  +  I+ P  VQG+    
Sbjct: 119 KGYFERSRKKVLPRYPKKIAIVTSPTGAAIEDMKKVATHRWSLVEFILIPTLVQGEGASL 178

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IAN+I   + L         DI+I+ RGGGSIEDLW FN+E++  AI  +  PIISA+G
Sbjct: 179 DIANSIKYADKL-------NCDIMIVGRGGGSIEDLWAFNEEIVANAIYEAQTPIISAVG 231

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D+ ++D+ AD+RA TP+ A E+A+P     +  L +LE  + N    ++  K   L 
Sbjct: 232 HEVDYLISDFVADIRAATPSNAIEIALPDINEHRIYLDSLENEITNRFKNILFNKEQELK 291

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           ++ K       ++      +      ++ +L+I + +K+  + + I+ +KS++L ++  K
Sbjct: 292 NMKKLFEQ--NSIETKFNFIQTQINFIKSSLKINLNQKFLSYQNQIDLLKSNYLSNHPDK 349

Query: 369 NRQH 372
             ++
Sbjct: 350 KEKN 353



 Score = 42.4 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I ++R ++   +  I    K  L     E K    +    +   + +  ++ T I  + +
Sbjct: 261 INEHRIYLDSLENEITNRFKNILFNKEQELKNMKKLFE--QNSIETKFNFIQTQINFIKS 318

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            ++  L+ K  S    + +      S       K G+  I   +N  I    +L     I
Sbjct: 319 SLKINLNQKFLSYQNQIDLLKSNYLSNHPDKKEKNGFVQI-SKSNKVI-NLADLKIGDEI 376

Query: 486 LIN 488
            + 
Sbjct: 377 ELQ 379


>gi|307709373|ref|ZP_07645831.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK564]
 gi|307619956|gb|EFN99074.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK564]
          Length = 446

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 149/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +PIIS++G
Sbjct: 180 EIACNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQKKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQVVQERTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMVLVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++  + + I    NL    ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVK-KDESVIDSVENLKKTDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|297588521|ref|ZP_06947164.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC
           53516]
 gi|297573894|gb|EFH92615.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC
           53516]
          Length = 444

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 139/492 (28%), Positives = 224/492 (45%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV E+S ++++ +  +  LS+V V GEIS +   + SGH YF LKD  + I  +I+K 
Sbjct: 3   VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
                    ++G +  + G ITT+ GSS YQ++++    SG+G L     + K+KL +EG
Sbjct: 62  MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEQEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
            FS+  K  I   PK I VITS TGA + DI + I  R+P+  ++I+   VQG++  + I
Sbjct: 122 YFSESTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAESI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  ++           D II+ RGGGS EDL  +NDE +++ I N+  PIISA+GHE
Sbjct: 182 IKGIKYMDEQ-------NLDTIIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D+ ADLRA TPT AAE+A    + L+  L    A++N I+IR  + +   L   
Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFDELKYFLQESYAKINRILIRRFEDENQELEYY 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K L                         + II     +   + + +K        +  R
Sbjct: 295 AKQLEFLGP--------------------KNIIKEHMDNLQFLKDNLK--------KAYR 326

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +++ +K                   +E      +   +    +      + K+   +   
Sbjct: 327 KNLQDK-----------------YNEELNIYHKLSLLKPDKLLSLEIEKLNKIRITMIKN 369

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L   I      +      L        L++GY  +   NN  I+   ++     I++   
Sbjct: 370 LISNINYKELILDSYKNNLLHLNPSTILEKGYAKVL-KNNKSISSVDDVMENENIILIMK 428

Query: 491 DGQANAIVINKA 502
           DG+ +  V NK 
Sbjct: 429 DGKLDTTVQNKE 440


>gi|116515460|ref|YP_816538.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           D39]
 gi|122278576|sp|Q04KB0|EX7L_STRP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|124012085|sp|Q8DPM9|EX7L_STRR6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|116076036|gb|ABJ53756.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           D39]
          Length = 446

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE + P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|15903132|ref|NP_358682.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           R6]
 gi|15458712|gb|AAK99892.1| Exodeoxyribonuclease large subunit [Streptococcus pneumoniae R6]
          Length = 448

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 4   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE + P G G L    E+ KKKL E
Sbjct: 62  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 122 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 182 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 236 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 295

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 296 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 356 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 387

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 388 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 427

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 428 TLLMRDGQVELEVKDVKTKE 447


>gi|225868945|ref|YP_002744893.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702221|emb|CAW99959.1| putative exodeoxyribonuclease VII large subunit [Streptococcus equi
           subsp. zooepidemicus]
          Length = 451

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 136/494 (27%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV++L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G+I  +  +  Y IIIE   P G G L    E+ ++KL  EG 
Sbjct: 68  YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSIIIEKAEPDGIGALALQFEQLRQKLAGEGF 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P     + V+TSP+GAVIRDI+  IS RFP + +++FP KVQG+   +E+A
Sbjct: 128 FDERHKQALPQFVTKVGVVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANIARANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309
           D TLAD+ AD RA TPT AAE+A P+ +    S I  +   +         +        
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQNRSYQACLRYIRQGQERVDKL 301

Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       RLDRL   L    +  +    +    + +R+ S  +   +++
Sbjct: 302 SYSVMFRQPERLYDAYSQRLDRLTTSLMTTFKETLSEAKQEHLILEHRLASVNVQARLER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + +   +           +                                
Sbjct: 362 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 390

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  ++  +       +++     + I 
Sbjct: 391 ----------------AQAALLSLDTSRIIARGYALLK-KDGVVAACVKDIKKGDHLSII 433

Query: 489 FFDGQANAIVINKA 502
             DGQ    V +  
Sbjct: 434 MRDGQLEVEVEDVN 447


>gi|303254294|ref|ZP_07340403.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS455]
 gi|303258841|ref|ZP_07344820.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP-BS293]
 gi|303261525|ref|ZP_07347472.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264195|ref|ZP_07350115.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS397]
 gi|303266174|ref|ZP_07352067.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS457]
 gi|303268099|ref|ZP_07353899.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS458]
 gi|301801932|emb|CBW34657.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pneumoniae INV200]
 gi|302598788|gb|EFL65825.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS455]
 gi|302637105|gb|EFL67593.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639784|gb|EFL70240.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP-BS293]
 gi|302642316|gb|EFL72663.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS458]
 gi|302644344|gb|EFL74598.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS457]
 gi|302646007|gb|EFL76234.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           BS397]
          Length = 446

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE + P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|260890095|ref|ZP_05901358.1| hypothetical protein GCWU000323_01257 [Leptotrichia hofstadii
           F0254]
 gi|260860118|gb|EEX74618.1| exodeoxyribonuclease VII, large subunit [Leptotrichia hofstadii
           F0254]
          Length = 450

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 223/486 (45%), Gaps = 52/486 (10%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   +SVS+++  +K  +E  +   ++ + GE+S     + SGH YF+LKD ++ +   
Sbjct: 5   MEQTVFSVSDINREVKMFLEGTNTFKNIFIEGELSNIT-YYRSGHLYFTLKDANASVKCA 63

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126
           I++     +    +EG    + G +T +  +  YQI+ + L  S   G     +E  KK 
Sbjct: 64  IFRYKYRGVPEDLKEGDLVKIRGSVTLYEANGSYQIVADFLEKSNSLGLFYEKMEMLKKL 123

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
             E+G FSD+ K  +P +P  I V+T+ TGA IRDI+     RFP + + ++P KVQG+ 
Sbjct: 124 YFEKGYFSDEIKKQLPKLPINIGVVTADTGAAIRDIINTTHKRFPNVNIYLYPAKVQGEG 183

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             +E++  I   N + E       D +I+ RGGGSIEDLW FN+E ++ AI  S IP+IS
Sbjct: 184 AAREVSAGIEFFNRMNEE-KYLEIDTLIVGRGGGSIEDLWAFNEEAVIEAIYKSEIPVIS 242

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D  L+D  AD RA TPT AAE+ +P K         L   L +    L K  +N
Sbjct: 243 AVGHEIDNLLSDLVADKRAATPTQAAEILIPEK-------DKLTDELESKKNLLSKLLLN 295

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +  + K L               R       N   I+  K         ++ S  L   
Sbjct: 296 RVAMMKKELE-------------YRKNNYYIKNFANILDNKKFDLMEKEQKL-SRELRRI 341

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +QK+R+ +  ++Q  ++I                          +  I     ++KK   
Sbjct: 342 VQKSREQLDYRKQRFDRI------------------------NLQKIILSEKENLKKKSA 377

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +  I+    ++    +      L  ++  + LK+GYT  +  N   + +   L+ + ++
Sbjct: 378 ELNQIILEFFENRKKELKYKKAQLSKYSVSDILKQGYTITR-KNGKIVKRGIELSKEDKL 436

Query: 486 LINFFD 491
            I F D
Sbjct: 437 EIEFSD 442


>gi|182684063|ref|YP_001835810.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           CGSP14]
 gi|182629397|gb|ACB90345.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           CGSP14]
          Length = 448

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 4   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE + P G G L    E+ KKKL E
Sbjct: 62  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 122 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 182 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 236 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 295

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 296 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 355

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 356 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 387

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 388 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 427

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 428 TLLMRDGQVELEVKDVKTKE 447


>gi|307708728|ref|ZP_07645191.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis NCTC
           12261]
 gi|307615302|gb|EFN94512.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis NCTC
           12261]
          Length = 446

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 149/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIKFEQLKKKLAE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQPLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DNLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +     I+R+     +  
Sbjct: 294 KKCSHSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQVVQARIHRLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DG+    V +    +
Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445


>gi|150390266|ref|YP_001320315.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|166919629|sp|A6TR38|EX7L_ALKMQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|149950128|gb|ABR48656.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 410

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 140/364 (38%), Positives = 215/364 (59%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SVSE+++++K I+  +  LS+V ++GEIS Y+ +HSSGH YF+LKD  SR+ ++
Sbjct: 1   MQIKALSVSEINHYIKRIMINDPILSNVYIKGEISNYK-LHSSGHIYFTLKDEKSRVSSV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    +++FLPEEG++ L  G I+ +     YQ  ++ +  +G G L  A ++ K+KL
Sbjct: 60  MFKTNTEQLKFLPEEGMQVLCRGYISLYERGGLYQFYVDHMEAAGVGALYLAYQQLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            ++G F  + K  IP IP+ IAV+TSPTGA +RDI+  I  RFP + + +FPV VQGD  
Sbjct: 120 EKQGYFDGKFKKEIPLIPRKIAVVTSPTGAAVRDIISVIKRRFPHVEIYLFPVLVQGDRA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              IA A+  LN           D+ I+ RGGGSIE+LW FN+E +  AI +S +PIISA
Sbjct: 180 APSIARAVELLNLF------GGIDVAIIGRGGGSIEELWPFNEETVAEAIFSSQVPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTP+ AAE  VP  + +   L  L+ RLN  +++ I  K N 
Sbjct: 234 VGHETDFTIADFVADLRAPTPSVAAERVVPDVKEVVERLNTLKDRLNKTLVKSIDAKRNQ 293

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  +       N    +   +  LD L ++L  N+ +       + + +  R+ S   + 
Sbjct: 294 LGIIKSNYYFKNPLNMIYDRQQHLDILMKDLTRNINVKNSLYSNNVHRLGERLNSVSPLS 353

Query: 365 NIQK 368
              +
Sbjct: 354 VFSR 357



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 2/140 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +  + + + + +       +  I   +   +   N I+    H+  L+  +   
Sbjct: 270 ERLNTLKDRLNKTLVKSIDAKR--NQLGIIKSNYYFKNPLNMIYDRQQHLDILMKDLTRN 327

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++ K      +V      L S +  +   RGY   ++     I    N+  K  I +   
Sbjct: 328 INVKNSLYSNNVHRLGERLNSVSPLSVFSRGYALAENKKGERIKTISNVKLKESITVQLI 387

Query: 491 DGQANAIVINKAPPKEQPTK 510
           DGQ +  V N     +   K
Sbjct: 388 DGQLSCEVTNILKEDKLVGK 407


>gi|256847383|ref|ZP_05552829.1| exodeoxyribonuclease VII, large subunit [Lactobacillus coleohominis
           101-4-CHN]
 gi|256716047|gb|EEU31022.1| exodeoxyribonuclease VII, large subunit [Lactobacillus coleohominis
           101-4-CHN]
          Length = 463

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 127/509 (24%), Positives = 225/509 (44%), Gaps = 73/509 (14%)

Query: 10  LDHPEYSVSELSYHLKHIVESN----LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--- 62
            +    +V++L+ +++   +++     ++  + GE++ Y    SS H YFSLKD++    
Sbjct: 2   TEVEPITVNQLTKYIRRKFQADPYIYQTNFWLVGELTDY--RPSSRHQYFSLKDDNEELS 59

Query: 63  -----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
                +I A+++     K++F PE G++ LV G +  +P    YQ  +  +   G G+L 
Sbjct: 60  ARDQYKISAVMFANDFRKVKFQPENGMKVLVYGHVDIYPNRGAYQFYVSQMEVQGIGSLQ 119

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
            A ++  +KL +EGLF    K  I   P+ +A++TS   AV  DI+     R P ++++ 
Sbjct: 120 VAFQQMYEKLKKEGLFDQPKKV-IRSFPQRVAIVTSNDAAVKHDIITTFRRRNPLIQLVC 178

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           +P KVQGD+    IA+ I Q++           D +I+ARGGGS  DLW FN E + RAI
Sbjct: 179 YPTKVQGDDAAPMIAHQIRQVSA------DGNYDTLIVARGGGSRGDLWAFNSEEVGRAI 232

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV-PVKEHLQSSLINLEARLNNI 295
           A   IP+IS++GHE D T+AD  AD R  TPT AA  A   +   +++ + N+  +L+++
Sbjct: 233 AECPIPVISSVGHEVDTTIADLVADDREATPTSAAVRASAWLLADVKTEIQNVRQQLSHL 292

Query: 296 IIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           +   I +    L +L K        + L     RLD L ++L  ++      K +    +
Sbjct: 293 MKLDIDHLQERLTALQKNYIFQEPTRILQQPTERLDDLKQQLMVSVRQRQHEKQQQLRLL 352

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
             ++ S       +++R+ +   QQ +  +  + +                         
Sbjct: 353 TTQLHSFSPTDRFKRDRERLQGLQQLLRTVGSRQIH------------------------ 388

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473
                                       ++     L +   +  L RGY+ +   +N  I
Sbjct: 389 -----------------------QSQLELTGLINQLVTLDPEKVLARGYSYVT-QSNQVI 424

Query: 474 TQKRNLATKTRILINFFDGQANAIVINKA 502
            Q   +    RI ++  DG   A +    
Sbjct: 425 KQVGQVKVADRITVHLVDGDVEAEIKQIK 453


>gi|307704840|ref|ZP_07641734.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK597]
 gi|307621616|gb|EFO00659.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK597]
          Length = 446

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQTLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R I  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVRNILSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     I  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPITK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DG+    V +    +
Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445


>gi|323342015|ref|ZP_08082248.1| exodeoxyribonuclease VII large subunit [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322464440|gb|EFY09633.1| exodeoxyribonuclease VII large subunit [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 496

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 128/500 (25%), Positives = 225/500 (45%), Gaps = 20/500 (4%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+E    LK +++ +    +V + GE+S ++  H SGH YFSLKD+ SRI   +++ + 
Sbjct: 8   TVTEFVNELKGVIDQHPSFKNVALVGELSNFKAHH-SGHFYFSLKDDKSRITCAMFRRSA 66

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +K+ F P++G + ++ G+   +  +   QI  + +   G G L    EK KK   + G F
Sbjct: 67  SKVLFRPKDGDKVVIFGRCEVYTDTGTVQIYADRMNLDGLGDLYIQFEKLKKDFEDRGYF 126

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              H+  IP  P+ IAVI     A   DI + +  R+P+ + I     VQGD   K +  
Sbjct: 127 DPNHRKKIPKYPQRIAVIVGENSAAYADITRTLQERWPIAKQIDLLAYVQGDNASKSLVQ 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I + +         + D IIL RGGGSIEDLW FN   +V +I  S IPIIS IGHE+D
Sbjct: 187 QIQRAH-------HEQADTIILGRGGGSIEDLWAFNTPEVVESIFKSEIPIISGIGHESD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310
            TL+D+ +D RA TPT AA  A P    +++ + + + +    +      +         
Sbjct: 240 VTLSDFVSDYRAATPTAAAVAATPNWVEMKAMIRDYKNQYYLAVRNKYLRRSGDYTSLIQ 299

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
             AL +    +   + +LD L   + H  + ++F + +    +I+    + L+     + 
Sbjct: 300 SSALKDPVLFVERKQQKLDTLTVRITH--QQVLFDESKRMLALISNRMENSLLLKYNNSS 357

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             I +        ++Q +     +     +      +     I      I++   R   I
Sbjct: 358 NIINQYLGLSSATIQQKMTQSLQKVDMMRSRFDFYSQYIDRSIKQNQGMIQQYDERFYSI 417

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKR----GYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +      ++   + L+  +  + ++R    GY   +  + + +    ++    RI 
Sbjct: 418 MERGLNLKKERLNDILKSLKYRSPLDVIQRNLNQGYIIPRVNDIHVV-NAESVNVDDRIQ 476

Query: 487 INFFDGQANAIVINKAPPKE 506
           + F DG     VI+K P  E
Sbjct: 477 LEFRDGFVLTQVISKEPKDE 496


>gi|229814966|ref|ZP_04445304.1| hypothetical protein COLINT_02009 [Collinsella intestinalis DSM
           13280]
 gi|229809453|gb|EEP45217.1| hypothetical protein COLINT_02009 [Collinsella intestinalis DSM
           13280]
          Length = 492

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 119/501 (23%), Positives = 206/501 (41%), Gaps = 33/501 (6%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHS 62
            +     D    SVS+ +      +      + V GE++G+RG    SGH YF +KD  +
Sbjct: 16  VADMGESDSDALSVSQAAELAAGALHGV-PKITVLGEVTGFRGPNARSGHCYFQIKDESA 74

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            ++ I+WKGT +K  F   +G++ L  G    +  + K      S   +G G L   + +
Sbjct: 75  ALECIVWKGTYDKRAFDLRDGLQVLFTGTFDLYKPTGKMSFKASSFTLAGEGLLRQQVAQ 134

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
             +KL  EGL   + K  IP     +AV+TS +GAVI D+ + +  R P + V+    KV
Sbjct: 135 LAEKLRREGLMEPERKRRIPVFCTRVAVVTSLSGAVINDVKRTLRRRNPMVEVVCVGAKV 194

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+  P E+   + +          P PD I+L RGGGS EDL  FNDE + RA+A   +
Sbjct: 195 QGEGAPAELVEGLRRA-----AAIAPAPDCILLVRGGGSFEDLMTFNDEGLARAVAACPV 249

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+++ IGHE D ++ D  +D R  TPT AAE   P    L S+L   E RL  +      
Sbjct: 250 PVVTGIGHEPDNSICDMVSDRRCSTPTAAAESVAPEFSELVSALDGREQRLQRVFEGK-- 307

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                              +  +    D L   L   +++ + R+ R  +    R     
Sbjct: 308 -------------------IVRAASACDGLGGRLGRAMDVRLERERRSLDAFATRPCLTS 348

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
             + + +    + +         ++      +    ++  L      +  ++  +   ++
Sbjct: 349 PANIVDRREVELAQTVDRFCTACERAQGRFAM----ELDRLAPRLRSSTAQMDRMGHALE 404

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
              +R+    +  + +    +  +   L + +    L RGY+   D   +  T+  +   
Sbjct: 405 LAASRLRSKGAQLLSAPVAELGRSAAALDALSPLKVLGRGYSIAYDGGGSVATRADSFHV 464

Query: 482 KTRILINFFDGQANAIVINKA 502
              + +   DG   A V    
Sbjct: 465 GDALRLRMADGDVLATVDAVE 485


>gi|149008190|ref|ZP_01831695.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP18-BS74]
 gi|307127201|ref|YP_003879232.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           670-6B]
 gi|147760371|gb|EDK67351.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP18-BS74]
 gi|306484263|gb|ADM91132.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           670-6B]
 gi|332074542|gb|EGI85016.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA17545]
          Length = 446

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|291520795|emb|CBK79088.1| exodeoxyribonuclease VII, large subunit [Coprococcus catus GD/7]
          Length = 403

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 124/404 (30%), Positives = 204/404 (50%), Gaps = 13/404 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS ++ ++K +   +   +H+ VRGE+S  +  HSSGH YF+LKD    I  +++ G
Sbjct: 6   VYSVSSVNQYIKSLFMDDFALNHIYVRGEVSNCK-YHSSGHIYFTLKDRGGAIACVMFAG 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F   EG+  +V G ++ +    KYQ+    +I  G+G L  A E  KKKLL EG
Sbjct: 65  NRKGLNFRMSEGMAVIVYGSVSVYERDGKYQLYAREIIQEGAGRLYEAYEALKKKLLAEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF D+HK  IP  PK + V+T+ TGA ++DI+     R P L+++  P  VQGD   + +
Sbjct: 125 LFDDEHKQKIPKYPKRLGVVTARTGAAVQDIINVSLRRNPWLQIVFCPSAVQGDGAAQSV 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L            D++I+ RGGGSIEDLW FN+E++ RA+   S+P+ISA+GHE
Sbjct: 185 VRGIHALEAA-------GVDVMIVGRGGGSIEDLWAFNEEIVARAVYECSVPVISAVGHE 237

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ D+ +DLRAPTP+ AAE+AVP    +   +   E  L++ + + +      + + 
Sbjct: 238 TDTTIIDFVSDLRAPTPSAAAELAVPDMRVILGQIQGYEESLSHAMEQAVLRNRQRVENY 297

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +   +      L+  R RL  +   L   +   +            +++    +  +++
Sbjct: 298 QRIFRHLNPQSRLNDRRQRLMEIEERLRIGMNRKLDAAKSELAIRTQKLEGVSPLRQLER 357

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
              ++ +++ H      Q  +   L    +   +       K R
Sbjct: 358 GYAYVSDEEGHGITSAGQVTKGQLLLLDVRDGRIESEVTAVKKR 401



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 59/151 (39%), Gaps = 1/151 (0%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-QTKN 411
           +     S      +   R  + + Q + E +     + +   ++       + R    ++
Sbjct: 249 LRAPTPSAAAELAVPDMRVILGQIQGYEESLSHAMEQAVLRNRQRVENYQRIFRHLNPQS 308

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
           R+      + ++  R+   ++ K+ +  + ++I T+ L+  +    L+RGY  + D   +
Sbjct: 309 RLNDRRQRLMEIEERLRIGMNRKLDAAKSELAIRTQKLEGVSPLRQLERGYAYVSDEEGH 368

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKA 502
            IT    +     +L++  DG+  + V    
Sbjct: 369 GITSAGQVTKGQLLLLDVRDGRIESEVTAVK 399


>gi|292670716|ref|ZP_06604142.1| exodeoxyribonuclease 7 large subunit [Selenomonas noxia ATCC 43541]
 gi|292647662|gb|EFF65634.1| exodeoxyribonuclease 7 large subunit [Selenomonas noxia ATCC 43541]
          Length = 401

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 128/358 (35%), Positives = 200/358 (55%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+++ ++K + E    LS + +RGE+S ++    SGH YF+LKD  + +  +++ G  
Sbjct: 5   SVSDVTRYIKGLFEGEEILSAILIRGELSNFKRYP-SGHCYFTLKDAEASMKCVMFNGYA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +  G ++ +     YQ+ + SL P G+G L  A E+ K++L  EGLF
Sbjct: 64  RNLRFTPENGMQVIAGGSVSVYERDGVYQLYVNSLTPEGAGALALAFEQLKERLAAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            + HK P+P  P+ I ++TS  GAV+RDI +    R+P +++I+ PV VQG E   +IA 
Sbjct: 124 DETHKQPLPRFPRRIGIVTSSAGAVLRDIHKVTKRRWPGIQLILCPVLVQGTEAAGQIAG 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+   N           D++I+ RGGGS EDLW FN+E++VRAI +S IP+ISA+GHETD
Sbjct: 184 AVKFFNRKYP------VDVLIVGRGGGSAEDLWAFNEEIVVRAIYDSKIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TLAD+ +D RA TP+ AAE+AVP    L      L  RL+    R +  +++ L SL  
Sbjct: 238 TTLADFVSDRRAATPSQAAELAVPDAGELCQYAAGLLTRLSAGRKRQMGQRMSYLKSLTD 297

Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                N    LS      D +  +L   ++        H   I+ R++    +  + +
Sbjct: 298 RPWRRNPGLLLSAPIQHTDHVTEQLYRAVKEQRTNTRHHLELILKRLELLNPVQILYR 355



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 3/137 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q+       +    K+ +       K         R      +     H   +  ++   
Sbjct: 268 QYAAGLLTRLSAGRKRQMGQRMSYLKSLTDR--PWRRNPGLLLSAPIQHTDHVTEQLYRA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +  +    + +  + L+       L RG++ ++  +   +++ + L+    + I F 
Sbjct: 326 VKEQRTNTRHHLELILKRLELLNPVQILYRGFSIVE-KDGRTVSRAKELSVGDHLNITFA 384

Query: 491 DGQANAIVINKAPPKEQ 507
           DG+ +A+V  K      
Sbjct: 385 DGKISAVVKAKEKQNGT 401


>gi|257126238|ref|YP_003164352.1| exodeoxyribonuclease VII large subunit [Leptotrichia buccalis
           C-1013-b]
 gi|257050177|gb|ACV39361.1| exodeoxyribonuclease VII, large subunit [Leptotrichia buccalis
           C-1013-b]
          Length = 446

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 134/486 (27%), Positives = 226/486 (46%), Gaps = 52/486 (10%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   +SVS+++  +K  +E  +   ++ + GE+S     + SGH YF+LKD  + +   
Sbjct: 1   MEQTVFSVSDINREVKMFLEGTNTFKNIFIEGELSNIT-YYRSGHLYFTLKDASASVKCA 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126
           I++     +    +EG    + G +T +  +  YQI+ + L  S   G L   +E  KK 
Sbjct: 60  IFRYKYRGVPEDLKEGDLVKIRGSVTLYEANGSYQIVADFLEKSNSLGLLYEKMEMLKKL 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
             E+G FSD+ K  +P +P  IAV+T+ TGA IRDI+     RFP + + ++P KVQG+ 
Sbjct: 120 YFEKGYFSDEIKKQLPKLPINIAVVTADTGAAIRDIINTTHKRFPNVNIYLYPAKVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             +E++  I   N + E     + D +I+ RGGGSIEDLW FN+E ++ AI  S IP+IS
Sbjct: 180 AAREVSAGIEFFNRMNEE-KQLKIDTLIVGRGGGSIEDLWAFNEEEVIEAIYKSEIPVIS 238

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D  L+D  AD RA TPT AAE+ +P KE L   L + +  L+ +++  +     
Sbjct: 239 AVGHEIDNLLSDLVADKRAATPTQAAEILIPEKEKLTDELESKKNLLSKLLLNKVTMMKK 298

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L                      R       N   I+  K         ++ S  L   
Sbjct: 299 ELEY--------------------RKNNYYIKNFANILDNKKFDLMEKEQKL-SRELRRI 337

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +QK+R+ +  ++Q  ++I                          +  I     ++KK   
Sbjct: 338 VQKSREQLDYRKQRFDRI------------------------NLQKIILSEKENLKKKSA 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +  I+    ++    +      L  ++  + LK+GYT  +  N   + +   L+ + ++
Sbjct: 374 ELNQIILESFENRKKELKYKKAQLSKYSVSDILKQGYTITR-KNGKIVKRGIELSKEDKL 432

Query: 486 LINFFD 491
            I F D
Sbjct: 433 EIEFSD 438


>gi|320162024|ref|YP_004175249.1| exodeoxyribonuclease VII large subunit [Anaerolinea thermophila
           UNI-1]
 gi|319995878|dbj|BAJ64649.1| exodeoxyribonuclease VII large subunit [Anaerolinea thermophila
           UNI-1]
          Length = 413

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 134/370 (36%), Positives = 206/370 (55%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
               +    P  SVSEL+  ++ ++E    LS + V GEIS +    +SGH YF+LKD+ 
Sbjct: 1   MDMPSLFPTPALSVSELTRLIRSLLESEPALSEIWVAGEISNFT-RAASGHVYFTLKDSG 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +  +IW+     +    ++GI     G I  +     YQ  + ++ P+G G L     
Sbjct: 60  AALKCVIWRNAARTLRVPLQDGIAIEAFGSIGVYEQGGNYQFYVTAVRPAGEGYLYQQFL 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K +L  EGLF+++ K PIP  P+ I V+TSPTGA ++DIL  +  R+P + VI+ P  
Sbjct: 120 RLKAQLEAEGLFAEERKRPIPTFPRRIGVVTSPTGAALQDILNTLRRRYPLVEVILAPSA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+E P E+  A+  LN +      P  D+I+LARGGGSIEDLW FNDE +VR +A S 
Sbjct: 180 VQGEEAPLELVQALNALNRI------PDLDVILLARGGGSIEDLWAFNDEGVVRTVAASR 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+I+ +GHETD+TL D+AADLRAPTPTGAA +A P +  L   +     RLN +I + +
Sbjct: 234 VPVITGVGHETDFTLVDFAADLRAPTPTGAATLATPDRAELLIQVERTLQRLNRLISQRV 293

Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   LN L   L      + +  +R RLD     L++    +I ++  H   +   + 
Sbjct: 294 NLESARLNQLESRLQRASPVRRIEDNRQRLDNAILRLQNTAARLIAQRQAHLQALNAHLS 353

Query: 359 SDFLIHNIQK 368
           +   +  +++
Sbjct: 354 ALNPLAVLER 363



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 2/136 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +    Q + +++ Q +        +  + L   R     RI      +   I R++   
Sbjct: 277 QVERTLQRLNRLISQRVNLESARLNQLESRLQ--RASPVRRIEDNRQRLDNAILRLQNTA 334

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           +  I      +      L +      L+RG+  I+      +T+         + I   D
Sbjct: 335 ARLIAQRQAHLQALNAHLSALNPLAVLERGFALIEHPEGGILTRAAQAQAGETVRIRLAD 394

Query: 492 GQANAIVINKAPPKEQ 507
           G   A V +     E+
Sbjct: 395 GALTAKVEHVLLKPEK 410


>gi|169832990|ref|YP_001694644.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|226697615|sp|B1IC09|EX7L_STRPI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|168995492|gb|ACA36104.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 446

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + ++  +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|332201674|gb|EGJ15744.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA47368]
          Length = 446

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + ++  +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|149012258|ref|ZP_01833327.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP19-BS75]
 gi|147763584|gb|EDK70519.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP19-BS75]
          Length = 446

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I   IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|15901070|ref|NP_345674.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           TIGR4]
 gi|111657817|ref|ZP_01408534.1| hypothetical protein SpneT_02000999 [Streptococcus pneumoniae
           TIGR4]
 gi|148998637|ref|ZP_01826076.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP11-BS70]
 gi|168577213|ref|ZP_02723022.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           MLV-016]
 gi|225856880|ref|YP_002738391.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           P1031]
 gi|307067857|ref|YP_003876823.1| exonuclease VII large subunit [Streptococcus pneumoniae AP200]
 gi|22095675|sp|Q97QJ8|EX7L_STRPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783714|sp|C1CKV3|EX7L_STRZP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|14972688|gb|AAK75314.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           TIGR4]
 gi|147755474|gb|EDK62522.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP11-BS70]
 gi|183577204|gb|EDT97732.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           MLV-016]
 gi|225724676|gb|ACO20528.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           P1031]
 gi|306409394|gb|ADM84821.1| Exonuclease VII, large subunit [Streptococcus pneumoniae AP200]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|210615788|ref|ZP_03290769.1| hypothetical protein CLONEX_02987 [Clostridium nexile DSM 1787]
 gi|210150124|gb|EEA81133.1| hypothetical protein CLONEX_02987 [Clostridium nexile DSM 1787]
          Length = 407

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 127/362 (35%), Positives = 195/362 (53%), Gaps = 13/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSV +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    I  I++
Sbjct: 3   RNVYSVGQVNAYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGMIACIMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F   EG + +V+G ITT+    KYQ+  + +I  G+G L    E  K++L E
Sbjct: 62  AGQRGGLPFRMREGQQVIVLGNITTYERDGKYQLYAKEIILDGAGALYERFEALKQELGE 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F++++K PIP   + I V+T+PTGA IRDI+     R P ++++++P  VQG+    
Sbjct: 122 MGMFAEEYKQPIPKFARTIGVVTAPTGAAIRDIINVAGRRNPYVQLLLYPALVQGEGAAA 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L            D+II+ RGGGSIEDLW FN+E++ RAI    IP+ISA+G
Sbjct: 182 SIVEGIAAL-------EKKGVDLIIVGRGGGSIEDLWAFNEEIVARAIFECRIPVISAVG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+ADY ADLRAPTP+ AAE+AV   E   + +     ++   I +  +++     
Sbjct: 235 HETDTTIADYVADLRAPTPSAAAELAVFEYETFLNGVEEYRIKIRKAIHQKAEWEKIKTG 294

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                L   +    L   + R   L   L   +E  I  K R F   I R+K    +  +
Sbjct: 295 QYALKLKYLHPQNKLRDKQQRTVELEERLRQTMERKIDDKKRRFGFYIERMKGLSPLAKL 354

Query: 367 QK 368
            +
Sbjct: 355 NQ 356



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            I+     H +  + + K     L +     +N++        +L  R+   +  KI   
Sbjct: 275 RIKIRKAIHQKAEWEKIKTGQYALKLKYLHPQNKLRDKQQRTVELEERLRQTMERKIDDK 334

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
                     ++  +    L +G+  +   N   +    + A    + +   DG   A V
Sbjct: 335 KRRFGFYIERMKGLSPLAKLNQGFAYVSTENGKVVKTIADTANGETLNVYVTDGVIKARV 394

Query: 499 INKAPPK 505
            +    +
Sbjct: 395 EDTHKEE 401


>gi|225870047|ref|YP_002745994.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp.
           equi 4047]
 gi|225699451|emb|CAW92955.1| putative exodeoxyribonuclease VII large subunit [Streptococcus equi
           subsp. equi 4047]
          Length = 451

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 135/494 (27%), Positives = 222/494 (44%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV++L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 10  LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G+I  +  +  Y +IIE   P G G L    E+ ++KL  EG 
Sbjct: 68  YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSMIIEKAEPDGIGALALQFEQLRQKLAGEGF 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++HK  +P     + ++TSP+GAVIRDI+  IS RFP + +++FP KVQG+   +E+A
Sbjct: 128 FDERHKQALPQFVTKVGIVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++V+AI  S +P+IS++GHET
Sbjct: 188 ANITKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ AD RA TPT AAE+A P+ +    S I  +   +         +       L
Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQSRSYQACLRYIRQGQERVDKL 301

Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       RLDRL   L    +  +    +    + +R+ S  +   +++
Sbjct: 302 SYSVIFRQPERLYDAYSQRLDRLTTSLMTTFKETLSGAKQEHLILEHRLASVNVQARLER 361

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + +   +           +                                
Sbjct: 362 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 390

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  ++  +       +++     + I 
Sbjct: 391 ----------------AQAALLSLDTSRIIARGYALLK-KDGVVAACVKDIKKGDHLSII 433

Query: 489 FFDGQANAIVINKA 502
             DGQ    V +  
Sbjct: 434 MRDGQLEVEVEDVN 447


>gi|148989226|ref|ZP_01820606.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP6-BS73]
 gi|149002573|ref|ZP_01827505.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP14-BS69]
 gi|168486530|ref|ZP_02711038.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|237649508|ref|ZP_04523760.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           CCRI 1974]
 gi|237822540|ref|ZP_04598385.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           CCRI 1974M2]
 gi|147759184|gb|EDK66177.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP14-BS69]
 gi|147925204|gb|EDK76283.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP6-BS73]
 gi|183570424|gb|EDT90952.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC1087-00]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|328955334|ref|YP_004372667.1| Exodeoxyribonuclease VII large subunit [Coriobacterium glomerans
           PW2]
 gi|328455658|gb|AEB06852.1| Exodeoxyribonuclease VII large subunit [Coriobacterium glomerans
           PW2]
          Length = 494

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/506 (22%), Positives = 199/506 (39%), Gaps = 34/506 (6%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +VS+        +E  +  + V GE++G+RG    SGH YF +KD  + +D IIW+G  
Sbjct: 18  LTVSQAVQRASDALE-TIPSLTVIGEVTGFRGPNARSGHCYFQIKDEAAAVDCIIWRGAY 76

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K      +G++    G    +    +   +  S   +G G L   +    +KL  EGL 
Sbjct: 77  AKRPVDLRDGMQAQFTGAFNLYKPQGRMSFVARSFALAGEGLLRQQVAALAEKLRREGLM 136

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            +  K PI      +AV+TS +GAVI D+ + +  R P + +I    KVQG+    E+  
Sbjct: 137 EEARKRPIAAFCSRVAVVTSLSGAVIDDVKRTLRRRNPLVELICVGAKVQGEGAADELIE 196

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +      +   T P PD I+L RGGGS EDL  FNDE + RA+A S +P+++ IGHE D
Sbjct: 197 GL-----RRAASTRPAPDCILLVRGGGSFEDLMTFNDERLARAVAGSPVPVVTGIGHEPD 251

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            ++ D  +D RA TPT AAE   P    L   L + E R+   +   ++           
Sbjct: 252 TSICDMVSDRRASTPTAAAESVAPDMSDLIEVLSSREHRIALAMAARVRTAAKECAM--- 308

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                             L +     +   + R     +    R         + + R  
Sbjct: 309 ------------------LEQRDRRAISGYLDRAQMTLSAWAARPCLLDPTQIVDRRRSE 350

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + +    + Q +            + +A L    +++ +R+      +    +R+  +  
Sbjct: 351 LAQTSDRLAQALV----RAQARYDDDLARLVPRFKESASRLSDRRHELVLSASRLSHVGR 406

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +    + ++     L + +    L RGY+                +    + +   DG
Sbjct: 407 DALADARSGLASDAASLDALSPLAVLARGYSIAYGDAG-VAGSIELFSAGDEMRLRMVDG 465

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNK 518
           +  A V + +P +             
Sbjct: 466 ELAATVTSVSPGEACSDGSSPAAPRS 491


>gi|325694103|gb|EGD36021.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK150]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 157/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTDQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|301794296|emb|CBW36720.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pneumoniae INV104]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|225860954|ref|YP_002742463.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230894|ref|ZP_06964575.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           str. Canada MDR_19F]
 gi|298254305|ref|ZP_06977891.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           str. Canada MDR_19A]
 gi|298502794|ref|YP_003724734.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254783715|sp|C1CR91|EX7L_STRZT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|225727701|gb|ACO23552.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238389|gb|ADI69520.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGNYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|269836820|ref|YP_003319048.1| exodeoxyribonuclease VII, large subunit [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786083|gb|ACZ38226.1| exodeoxyribonuclease VII, large subunit [Sphaerobacter thermophilus
           DSM 20745]
          Length = 414

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/369 (32%), Positives = 208/369 (56%), Gaps = 12/369 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              V++++ ++K +++++  LS V +RGE+S +    ++GH YF+LK   +++  ++++G
Sbjct: 3   ILDVADVTAYIKDLLDADPILSDVWIRGEVSNFV-RSAAGHIYFTLKSERAQLRCVLFRG 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F PE G   L  G+++ +    +YQ+ ++ + P G+G L    E+ +++L  EG
Sbjct: 62  NARWLTFQPENGDAILAHGRVSVYEAGGQYQLYVDLIQPEGTGLLHLQFEELRRRLEMEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           LF    K P+P +P+ I V+TSPTGAV  DI   +  R+PL  +++ P +VQG++ P  I
Sbjct: 122 LFDPSRKRPLPRLPRRIGVVTSPTGAVWHDIQTVLRRRYPLAELVLAPAQVQGEDAPPTI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+  L      +     D+II+ARGGGS+EDLW FNDE + RA+  S IP+ISA+GHE
Sbjct: 182 IRALEAL------QLDGNVDVIIIARGGGSMEDLWCFNDEALARAVFASRIPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+ D+ AD+RAPTP+ AAE+  P    L + +  L AR NN +  +++    T++ L
Sbjct: 236 TDYTICDFVADVRAPTPSAAAEIVAPHINELAAEVTGLLARANNALWEILRDCRETVDGL 295

Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L     +  +   R RLD     +  +L   I  +      I  ++     +  +++
Sbjct: 296 ALRLQRHGPENLIRQERLRLDNRAEIMHQHLRRRIASQRAAIEAIQRQLDLLHPLGVMRR 355

Query: 369 NRQHILEKQ 377
               +L++ 
Sbjct: 356 GYAIVLDRA 364



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 2/141 (1%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
           + +        +   ++    +   L+    +N I      +      +   L  +I S 
Sbjct: 274 LARANNALWEILRDCRETVDGLALRLQRHGPENLIRQERLRLDNRAEIMHQHLRRRIASQ 333

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497
             ++    R L        ++RGY  + D      +   + L     + + F DG+A A+
Sbjct: 334 RAAIEAIQRQLDLLHPLGVMRRGYAIVLDRATGERLRSVKGLTVDQEVTLEFHDGEAGAV 393

Query: 498 VINKAPPKEQPTKKCQLHNNK 518
           V +    +            +
Sbjct: 394 VRSVETSRGAEHVHTPAETQR 414


>gi|194397974|ref|YP_002037811.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           G54]
 gi|225858992|ref|YP_002740502.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           70585]
 gi|226697614|sp|B5E4U5|EX7L_STRP4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783710|sp|C1C7H6|EX7L_STRP7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|194357641|gb|ACF56089.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           G54]
 gi|225722101|gb|ACO17955.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           70585]
          Length = 446

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|261855049|ref|YP_003262332.1| exodeoxyribonuclease VII large subunit [Halothiobacillus
           neapolitanus c2]
 gi|261835518|gb|ACX95285.1| exodeoxyribonuclease VII, large subunit [Halothiobacillus
           neapolitanus c2]
          Length = 501

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 131/489 (26%), Positives = 229/489 (46%), Gaps = 17/489 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV+ L+   K I+E+NLS V V+GE+       +SGH YFSLKD  + +   +++G  
Sbjct: 4   ILSVTSLNAMAKQILEANLSGVMVQGEVRSLT-RAASGHMYFSLKDQQAEVRCALFRGQA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +++     G   +V G ++ +     YQ+I+  +  +G G L    E  KKKL  EGLF
Sbjct: 63  MRVKTAFANGDAVVVRGSVSLYAPRGDYQLIVTGVELAGDGQLAVLFEALKKKLFAEGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  IP + + I VI+S  GA ++D+L  ++ R P + + + PV VQG+    E+  
Sbjct: 123 DAARKRAIPTLSRRILVISSAAGAALQDVLSTLTRRLPLVEINLVPVAVQGEAAAAELTA 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  + +  E       D+++L RGGGS+ DLW FNDE + RAIA   +P+IS +GHE D
Sbjct: 183 AVRGITSDSE------FDVVLLVRGGGSMSDLWAFNDEGLARAIAACPVPVISGVGHEID 236

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL-NNIIIRLIKYKINTLNSLL 311
           +T++D+ AD RA TPT AAE+A P+      + + L+    + +I   +      L+S L
Sbjct: 237 FTISDFVADARAATPTAAAELATPITLGELQAALVLQQEQLSRLIEDRLNAAGQRLDSSL 296

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L    Q      +    L   L+  +             + +R++    +H +++N  
Sbjct: 297 NRLRQQRQRWLPQGHHQMMLSLRLQRAIRARWQDNLGQIRALTHRLQQRSPVHWVRQNHS 356

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + + +  ++Q + Q L           A L  L      +I     + +++   +    
Sbjct: 357 RLEQMRWRLQQAIDQRLAAQRQNNLRLAAGLRPLI--VLRQIELRQQNSQRITAHLHAAA 414

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR---NLATKTR---I 485
             ++      +     +L + + +  L+RGY+ ++  +            LA   R   +
Sbjct: 415 RQRLVRQQQRLEQAFGVLSALSPQRVLERGYSLVEAESGLLWHAAALQSALAESDRPLPL 474

Query: 486 LINFFDGQA 494
            ++F DG  
Sbjct: 475 RLHFGDGVV 483


>gi|332200656|gb|EGJ14728.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA41317]
          Length = 446

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+E  +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEEAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|168484959|ref|ZP_02709904.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|168493129|ref|ZP_02717272.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|221231908|ref|YP_002511060.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           ATCC 700669]
 gi|225854679|ref|YP_002736191.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           JJA]
 gi|254783711|sp|B8ZQ76|EX7L_STRPJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783713|sp|C1CEH0|EX7L_STRZJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|172041912|gb|EDT49958.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|183576657|gb|EDT97185.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674368|emb|CAR68917.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pneumoniae ATCC 700669]
 gi|225722643|gb|ACO18496.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           JJA]
          Length = 446

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|331266227|ref|YP_004325857.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis Uo5]
 gi|326682899|emb|CBZ00516.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis Uo5]
          Length = 446

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 149/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQPLPQFSKKIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     ++ +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMATAVQNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     I  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPITK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRGQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++      +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-TVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|324990649|gb|EGC22585.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK353]
          Length = 446

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 156/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|327458745|gb|EGF05093.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1057]
          Length = 446

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLDRVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG     
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|308234514|ref|ZP_07665251.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae DSM
           15829]
 gi|328944108|ref|ZP_08241573.1| exodeoxyribonuclease VII large subunit [Atopobium vaginae DSM
           15829]
 gi|327492077|gb|EGF23851.1| exodeoxyribonuclease VII large subunit [Atopobium vaginae DSM
           15829]
          Length = 450

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 128/493 (25%), Positives = 203/493 (41%), Gaps = 56/493 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIW 69
           +    SV +     +  V   +  +CV GE+SGYRG    SGH YF LKD  S +D I+W
Sbjct: 3   NAKPISVCDAVAQAQSCV-KTMPSLCVNGEVSGYRGPNARSGHCYFQLKDAQSSMDVIMW 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           + T N   F  ++G++  V G    +  S K   +I S   +G G L   + +  KKL  
Sbjct: 62  RSTFNACNFQMKDGLQLEVRGSFNIYGASGKLSFVITSAHVAGEGLLRLQVAQLAKKLEA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGL SD  K  IP     I V TS +G+VI D+ + ++ R P + +      VQG + P 
Sbjct: 122 EGLMSDARKRSIPRFCSRIVVCTSLSGSVIEDVKRTLARRNPLVEIQAVGCSVQGAQAPA 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I  A+             +PD I+L RGGGS EDL  FNDE + RA+A S IP+I+ IG
Sbjct: 182 TICRALAIA-------AQAKPDAILLVRGGGSFEDLMCFNDESVARAVAASPIPVITGIG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D ++ D  +D R  TPT AAE   P  + +Q  +   + RL   +            
Sbjct: 235 HEPDTSICDLVSDRRTSTPTAAAESVAPAFDEVQGQIWERQRRLAQAM------------ 282

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                       L   R  ++ L +     +   +     + +HI +R         I +
Sbjct: 283 ---------SAILKAQRANIESLSQSANRVIHSKLAETKVYLDHISSRKCLTSPDAFISE 333

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  +    + +   +                            I         L  R  
Sbjct: 334 KQTSLELTAERLFAAMP-------------------------RDISRFRERTTPLFMRFN 368

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 ++    ++S+  + L + +   +L RGY+ +Q  + + ++   ++    RI I 
Sbjct: 369 KAGESFLQPYKHALSLYAQALDTLSPLKSLARGYSIVQADDGHVVSSALDVNVGDRIAIM 428

Query: 489 FFDGQANAIVINK 501
              G  +A V + 
Sbjct: 429 LGTGSVHASVSDI 441


>gi|289805293|ref|ZP_06535922.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 252

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/259 (44%), Positives = 162/259 (62%), Gaps = 8/259 (3%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           +S L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   +++ +  ++
Sbjct: 1   LSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRV 59

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
            F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL  EGLF  Q
Sbjct: 60  TFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLHAEGLFDQQ 119

Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195
           HK P+P     + VITS TGA + DIL  +  R P L VII+P  VQGD+ P +I  AI 
Sbjct: 120 HKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIE 179

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255
             NT  E       D++I+ RGGGS+EDLW FNDE + RAI  S IP++SA+GHETD T+
Sbjct: 180 LANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTI 233

Query: 256 ADYAADLRAPTPTGAAEMA 274
           AD+ ADLRAPTP+ AAE+ 
Sbjct: 234 ADFVADLRAPTPSAAAEIV 252


>gi|332363437|gb|EGJ41220.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK355]
          Length = 446

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 156/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|325688240|gb|EGD30259.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK72]
          Length = 446

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A P+ +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPITKLELLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGYLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|322376509|ref|ZP_08051002.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M334]
 gi|321282316|gb|EFX59323.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M334]
          Length = 446

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 151/500 (30%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLAE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGSAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDILAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +R+     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARKHRLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLAQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++  + + I    NL  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKED-SVIDSVENLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|153953853|ref|YP_001394618.1| exodeoxyribonuclease VII large subunit [Clostridium kluyveri DSM
           555]
 gi|219854468|ref|YP_002471590.1| hypothetical protein CKR_1125 [Clostridium kluyveri NBRC 12016]
 gi|189037849|sp|A5N7I9|EX7L_CLOK5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783697|sp|B9E101|EX7L_CLOK1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|146346734|gb|EDK33270.1| XseA [Clostridium kluyveri DSM 555]
 gi|219568192|dbj|BAH06176.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 400

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS+++ ++K  ++++    +  V+GE+S ++  HSSGH YFSLKD  S+I+ I++K +
Sbjct: 6   LTVSDINRYIKKTLDNDFILGNCSVKGEVSNFKF-HSSGHMYFSLKDKFSKINCIMFKSS 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           + K+ F+P +G++ +V G+I+ +     YQ+    + P G G L  A EK K +L ++GL
Sbjct: 65  VEKLNFMPGDGMKVIVKGRISLYEKEGVYQLYCSEMKPDGMGELYLAFEKLKIELEKKGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F   HK  IP   K I VITSPTGA ++DI+     R   + ++I+P  VQG      I 
Sbjct: 125 FDISHKKKIPLYAKKIGVITSPTGAAVKDIINVTRRRNKKIELLIYPSLVQGTGASDNII 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N++++       ++II+ARGGGSIE+LW FNDE +  A+ +S  PII+ +GHE 
Sbjct: 185 KGIETFNSMED------VELIIIARGGGSIEELWCFNDEKLAEAVYSSKKPIITGVGHEI 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ D+ +D+RAPTP+ AAE+ V   E     ++N + +L N +   +  K N L  + 
Sbjct: 239 DYTIVDFVSDMRAPTPSAAAEIGVFSLEEYVQKILNYKNKLYNSVKNTVNDKKNRLAFVK 298

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           K L   N    ++     +D++   L   +++II  K      I   + +   ++ + K
Sbjct: 299 KTLEVNNPLTYIANEYENIDKIKESLNFKIKVIINGKKEKLGKINALLSAHNPLNILNK 357



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++  Q IL  +  +   VK  +             L +        I   + +I K+  
Sbjct: 265 LEEYVQKILNYKNKLYNSVKNTVNDKKNRLAFVKKTLEV--NNPLTYIANEYENIDKIKE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            + F +   I      +     +L +    N L +GY  I+D   N I+    L  K ++
Sbjct: 323 SLNFKIKVIINGKKEKLGKINALLSAHNPLNILNKGYCIIEDEQKNVISSIEELNKKYKV 382

Query: 486 LINFFDGQANAIVI 499
            I   DG +   +I
Sbjct: 383 DIIMKDGTSKVELI 396


>gi|258405881|ref|YP_003198623.1| exodeoxyribonuclease VII, large subunit [Desulfohalobium retbaense
           DSM 5692]
 gi|257798108|gb|ACV69045.1| exodeoxyribonuclease VII, large subunit [Desulfohalobium retbaense
           DSM 5692]
          Length = 455

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 119/504 (23%), Positives = 212/504 (42%), Gaps = 58/504 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +SV EL+  +K +VE     V VRG++S       SGH YF+LKD  +++  + +KG  
Sbjct: 4   VFSVQELTQAVKGVVEGQFPLVWVRGQVSNL-SRPGSGHIYFTLKDELAQLKVVWFKGNQ 62

Query: 74  NKIEF--LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            +         G E +  G+++ +P    YQ+I E +   G G L  A E  K+K+  +G
Sbjct: 63  WQTPALESLHNGQEIVCAGRLSVYPPQGTYQLIAEWVQDQGIGRLQAAFEALKQKMEAKG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
            F+   K P+P  P+ +AV+T+P GA +RD L+    R  P  + I+P  +QG+     +
Sbjct: 123 YFAQDRKRPLPPHPQRVAVVTAPQGAAVRDFLRLAGERGRPAAIRIYPSLMQGEGAEDNV 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+ Q+   +        +++++ RGGGS+EDLW FN E +  A+A+  +P ++AIGHE
Sbjct: 183 IGALEQVQLDEWA------EVVVITRGGGSLEDLWTFNTEAVAEAVAHFPLPTVAAIGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+ D  AD RA TP+ AA++  P+++ L   +   E RL+   +   ++       L
Sbjct: 237 RDVTIVDLIADSRAATPSHAAQLVWPLRQELVQEVDEWEMRLDKAWMVQWRHAQRRFAEL 296

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K L                            + R  +  + + + +         Q+  
Sbjct: 297 EKGLGWLSP--------------------RRRLQRMDKECHRLGHALVRTGRRFVTQQES 336

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +     +  + ++ +   R      +     L   R    N + +               
Sbjct: 337 RAHDSSEALLHRVRRHFGRTATERLEHAGRRLLHCRSNHFNAVAH--------------- 381

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINF 489
                      + I T  L     K  L+ G++ +   +    +T    +A +  + +  
Sbjct: 382 ----------RLEIQTSALAHLDPKAPLRHGFSLVSRVDTGELVTSAAQVAPEDFLQVQT 431

Query: 490 FDG--QANAIVINKAPPKEQPTKK 511
            DG  +  A   + A    Q T+ 
Sbjct: 432 GDGAYRVRATAGDTAASSGQETET 455


>gi|324995300|gb|EGC27212.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK678]
          Length = 446

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 234/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG     
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|296136139|ref|YP_003643381.1| exodeoxyribonuclease VII, large subunit [Thiomonas intermedia K12]
 gi|295796261|gb|ADG31051.1| exodeoxyribonuclease VII, large subunit [Thiomonas intermedia K12]
          Length = 448

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 136/486 (27%), Positives = 224/486 (46%), Gaps = 58/486 (11%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           ++VS L       + +  + + VRGEISG     +SGH YF+LKD  +++  + ++    
Sbjct: 2   WTVSALVQAFSDALNARFNSLSVRGEISGLV-RAASGHQYFNLKDGTAQLRCVWFRQRAG 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
                  +G+   +   +  +      Q+I+ES+ P G G LL A  + K KL  EGLF 
Sbjct: 61  SAATALRDGMSVRLRATVAIYEPRGDLQLIVESVQPDGEGALLEAFLRLKAKLQIEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+P +P+ + VITS   A +RD+L  +  R P +RV+++P  VQG   P E+  A
Sbjct: 121 SERKRPLPALPQAVGVITSLQAAALRDVLTTLRRRSPHVRVVVYPASVQGAAAPGELLAA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + +    +E       D+I+L RGGGS++DLW FNDE + RAIA S++P+IS +GHETD+
Sbjct: 181 LQRAQARRE------VDLILLVRGGGSLDDLWAFNDEALTRAIAASTLPVISGVGHETDF 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD+ ADLRAPTPT AAE+ VP +  L  +L +   R ++ + R ++ +    + L   
Sbjct: 235 TLADFVADLRAPTPTAAAELGVPAQAALLDALTHTAHRASSALSRHLQREQQRCDRLALR 294

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
            P     L+  +  L +L   L   L  +     +    + +R+ +  L+    + R+ +
Sbjct: 295 WPQPAALLATPQRHLAQLQWRLRQALNDLSRLHAQRLQLLQHRL-AHALLQRAPRERERL 353

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              ++ + + +                                   I     R++    H
Sbjct: 354 NRCERGLPEAL--------------------------------SRQISNSQLRLDRAAQH 381

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
                          LQ  + + TL RGY    + N   +     LA +  +L    D Q
Sbjct: 382 ---------------LQLLSPRATLARGYLLGMNANGQVLRDLTQLAPQQPLL--LADAQ 424

Query: 494 ANAIVI 499
               + 
Sbjct: 425 RAVRID 430


>gi|327489515|gb|EGF21308.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1058]
          Length = 446

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P  VQG     
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTNVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|163816788|ref|ZP_02208151.1| hypothetical protein COPEUT_02978 [Coprococcus eutactus ATCC 27759]
 gi|158448045|gb|EDP25040.1| hypothetical protein COPEUT_02978 [Coprococcus eutactus ATCC 27759]
          Length = 424

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 121/495 (24%), Positives = 210/495 (42%), Gaps = 81/495 (16%)

Query: 12  HPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  Y+V EL+  ++ ++  E  L ++CV GEI+G+ G    GH YFSLKD+   I A+++
Sbjct: 4   NNIYTVQELNRRIQDLISGEPWLGNLCVEGEITGF-GRDKKGHCYFSLKDSSGVISAVMF 62

Query: 70  KGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
            G     + F P+ G +    G++  +    KYQ+ ++ L+  G G +   L+K   KL 
Sbjct: 63  AGKQRYGLGFTPKNGDKVHAFGRVEVYVRDGKYQLYVDRLVRVGDGEVNANLQKLIAKLE 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
             GLFS ++K PIP  P+ I V+T+   A I DI +    R P  ++  +P  VQG    
Sbjct: 123 GMGLFSQEYKKPIPRYPRKIGVVTAGNKAAISDICKVAKTRDPYAQLYCYPATVQGQYAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +I+  I  L+ +         D+II+ RGGGS EDLW FN+E +  AI N+  PII+A 
Sbjct: 183 ADISRGIEILDGM-------GMDVIIVGRGGGSAEDLWAFNEEQVAWAIFNAETPIITAT 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+AD  AD R   P+ A   A+PV +   S                        
Sbjct: 236 GHEIDTTVADMVADKRESNPSTAVMHALPVVKETVSEFEQRY------------------ 277

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                                      ++  ++  + +  R+ +    +++       + 
Sbjct: 278 -------------------------LYIKALMDNRMEKYRRNLDGYARQLRLLSPEAQLG 312

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             R+ +   Q+ ++ ++                           R+   H   +++  R+
Sbjct: 313 AQREKLDRLQETMKSLM-------------------------SARLSSAHDRCERMSERL 347

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           E  +  K +    ++++ T  L   +    L  G+  I   +   +T   ++   + I I
Sbjct: 348 EGGMYRKYELRLNALAVMTERLHGLSPTAKLVNGFGYIASAD-QPVTSVGDVEPGSDIEI 406

Query: 488 NFFDGQANAIVINKA 502
              DG+  A V +  
Sbjct: 407 TVHDGKILASVTDIN 421


>gi|327461662|gb|EGF07993.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1]
          Length = 446

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG     
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|307706649|ref|ZP_07643456.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK321]
 gi|307618104|gb|EFN97264.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK321]
          Length = 446

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 150/500 (30%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQPLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESCLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +  +  +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMSTAVRNVLAKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +R+     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYMQRLDQLQLRLKQSLRTQISDNKQLVQTRTHRLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLSQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++      +    NL  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-LVVDSVENLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|160872586|ref|ZP_02062718.1| exodeoxyribonuclease VII, large subunit [Rickettsiella grylli]
 gi|159121385|gb|EDP46723.1| exodeoxyribonuclease VII, large subunit [Rickettsiella grylli]
          Length = 397

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 201/356 (56%), Gaps = 8/356 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YS+SEL+  ++ ++E     + V GE+S +    +SGH YFSLKD  +++   ++KG  
Sbjct: 6   IYSISELNQMVQTLLEDAFLPIWVEGEVSNF-ASPNSGHWYFSLKDEKAQVRCALFKGKQ 64

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              + L + G++ L   KI+ +P   ++Q+II+    +G G L    E+ K +L  +GLF
Sbjct: 65  LYKDNLLKNGMQILARAKISLYPTRGEFQLIIDQFESTGEGMLRKTFEQLKAQLKAQGLF 124

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             +HK P+P  P+ I +I+S TGA +RDI   +  RFP ++VI++P  VQG     ++  
Sbjct: 125 DLKHKKPLPQFPRTIGIISSETGAALRDICVVLKKRFPAIQVILYPSLVQGKNAGMQLVE 184

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N  KE       D++ILARGGG++EDLW FN+E + RAI  S +P+ISA+GHETD
Sbjct: 185 QIKTANQRKE------CDLLILARGGGTLEDLWPFNEECVARAIFKSKLPLISAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD RA TPT AA++A P     Q  L ++  RL  +I  L+K     L +L K
Sbjct: 239 FTIADFVADKRAATPTMAAQLASPDGCEYQRRLDSINQRLIKLIGSLLKNNHLYLENLAK 298

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L +  Q L  S    D L + L  ++   ++   +  + +   + +   + ++ +
Sbjct: 299 RLRHPQQRLQASFQHCDELAQRLHLSINRQLYLYEQKLSSLSRTLHAVSPLASLAR 354



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 49/133 (36%), Gaps = 5/133 (3%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + ++ +    Q + +++   L+   L  +     L       + R+     H  +L  R+
Sbjct: 266 EYQRRLDSINQRLIKLIGSLLKNNHLYLENLAKRL----RHPQQRLQASFQHCDELAQRL 321

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRIL 486
              ++ ++      +S  +R L + +   +L RGY  ++D  +   +   + +     I 
Sbjct: 322 HLSINRQLYLYEQKLSSLSRTLHAVSPLASLARGYAIVRDATSQKILRNSKKVKLGQEIT 381

Query: 487 INFFDGQANAIVI 499
                G+    V 
Sbjct: 382 TKLAKGELLCEVK 394


>gi|206602069|gb|EDZ38551.1| Exodeoxyribonuclease VII large subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 503

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 14/478 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            ++VSEL+  +   +E        V GE+S  +   SSGHAYF+LKD+ S+I  + ++G 
Sbjct: 16  VFTVSELTEGIGLAIEGAFPGFLHVEGEVSNLKES-SSGHAYFTLKDSSSQIRGVFFRGQ 74

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                FLP +G + L  G++T +    +YQI++ ++ P+G G       + + KL EEGL
Sbjct: 75  RRNDRFLPRDGDQVLATGRLTLYRPRGEYQIVVHAMEPAGIGKFFLEFRRVQHKLQEEGL 134

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
                K P+P  P  IA++TS  GAV+ D L+    R P + ++I PV+VQG+   ++I 
Sbjct: 135 LRADRKRPLPSYPFKIALVTSLKGAVVWDFLRIAESRNPSVSIVILPVRVQGEGAVEDIV 194

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           +A+ Q     E       D +++ARGGGSIEDLW FN E + R I +  +P++SA+GHET
Sbjct: 195 DALTQRIPRLEA-----LDAVVIARGGGSIEDLWPFNSERLARTILSCPVPVVSAVGHET 249

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           + T+AD  +DLR  TP+ AAE  VP    LQ  +     RL ++++  ++ +        
Sbjct: 250 NVTIADLVSDLRVATPSEAAEKLVPHSGELQRRIKGAFDRLTHVLLNELRKENLRYFRAR 309

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L      +     R +R    L   +E            I  R++     H +++ R 
Sbjct: 310 DRLFLWPHQIVSCHQRRERSEGRLISIVERKNHAFSMERQEIHQRLEQTV-FHLLRQKRA 368

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + +    I    K       L+++ + ++   L+              + +  R+   +
Sbjct: 369 FLEKTASRI----KTPYALYVLKRERQESLKGRLQANIARVFSVSSRSREGVQERLLKSM 424

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILIN 488
           S++++   +     T  LQ+    + L++G+  +   ++  +     L  +   +L  
Sbjct: 425 SNRLEEFRSIHRKLTERLQAATPFSALEKGFAILFHAHDRTLVSPARLPHSGEILLAR 482


>gi|332361750|gb|EGJ39554.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1056]
 gi|332366066|gb|EGJ43822.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1059]
          Length = 446

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG     
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|317152622|ref|YP_004120670.1| exodeoxyribonuclease VII large subunit [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942873|gb|ADU61924.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 487

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 119/538 (22%), Positives = 209/538 (38%), Gaps = 90/538 (16%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VSEL+  +K ++E+    V VRG+++      +SGH YF+L D  + +  + ++   
Sbjct: 4   ILTVSELTRSVKSLLEAEFPFVWVRGQVTNL-ARPASGHVYFTLTDGDAALSVVWFRSAQ 62

Query: 74  NKIEFL----------------------------------PEEGIEFLVIGKITTFPGSS 99
              E +                                   E G E L  G++  +    
Sbjct: 63  RSAEPVSRGGERINPLTGEVEESDEGGAALVAGGSPGAGVLEGGQEVLCAGRLNVYEPRG 122

Query: 100 KYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVI 159
           +YQ++ E +   G G L  A E  K KL  +G F +  K  +P  P  +AVITSP+GA I
Sbjct: 123 QYQLVAELVQAQGVGDLAVAFEALKGKLAAQGYFDEARKLELPRDPARVAVITSPSGAAI 182

Query: 160 RDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218
           RD L+    R     + I+P  VQG+  P++IA A+  ++           ++ +L RGG
Sbjct: 183 RDFLRLAGERGTGGEIRIYPSLVQGERAPEQIAAALDLVDADGWA------EVAVLIRGG 236

Query: 219 GSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK 278
           GS+EDLW FN E +  AI  + +P+++ +GHE D T+AD+ AD RA TP+ AA+   P +
Sbjct: 237 GSLEDLWAFNTETVADAIFRARVPVVTGVGHEPDVTIADFVADRRAATPSHAAQELWPRR 296

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           E L   +  LE  L       +  K      L +AL          R             
Sbjct: 297 ETLAQRVDVLEMALGRAYAGWLLGKGTQFEQLRRALSWLSPAHRLER------------- 343

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           +E  +             +                   ++    +     R        +
Sbjct: 344 MEDRLLSLLPRLGEAGQGL------------------WRRRGRALAAGVDRLGRAFGIVR 385

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +            R+      + ++  R               +++    L+    +  L
Sbjct: 386 VDRTRDEVAALCRRMDRAVHALAEVRAR--------------DLAVLGATLRGLDPEAPL 431

Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLH 515
           +RGY+ ++     +F+   + +     + I   +G+  A+V     P ++P +  +  
Sbjct: 432 ERGYSLVRIERTGDFLRDPKEVTAGDALDIRIRNGRVAAVV--ALDPGQKPAQTREKE 487


>gi|124515825|gb|EAY57334.1| Exodeoxyribonuclease VII large subunit [Leptospirillum rubarum]
          Length = 503

 Score =  293 bits (751), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 126/478 (26%), Positives = 223/478 (46%), Gaps = 14/478 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            ++VSEL+  +   +E        V GE+S  +   SSGHAYF+LKD+ S+I  + ++G 
Sbjct: 16  VFTVSELTEGIGLAIEGAFPGFLHVEGEVSNLKES-SSGHAYFTLKDSSSQIRGVFFRGQ 74

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                FLP +G + L  G++T +    +YQI++ ++ P+G G       + +  L EEGL
Sbjct: 75  RRNERFLPRDGDQVLATGRLTLYRPRGEYQIVVHTMEPAGIGKFFLEFRRVQHTLQEEGL 134

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
                K P+P  P  IA++TS  GAV+ D L+    R P + ++I PV+VQGD   ++I 
Sbjct: 135 LRPDRKRPLPAYPFKIALVTSLKGAVVWDFLRIAGSRNPAVSIVILPVRVQGDGAVEDIV 194

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A  +     +       D +++ARGGGSIEDLW FN E + R I +  +P++SA+GHET
Sbjct: 195 EAFTRSIPRIDA-----LDAVVIARGGGSIEDLWPFNSERLARTILSCPVPVVSAVGHET 249

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           + T+AD  +DLR  TP+ AAE  VP    LQ  +     RL ++++  ++ +        
Sbjct: 250 NVTIADLVSDLRVATPSEAAEKLVPHSGELQRRVKGAFDRLTHVLLNELRKENLRYFRAR 309

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L      +     R +R    L   +E            I  R++   + H +++ R 
Sbjct: 310 DRLFLWPHQIVSFHQRRERSEGRLISIVERKNHSFSMERQEIHQRLEQ-SVFHLLRQKRA 368

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + +    I    K       L+++++ ++   L+        +          R+   +
Sbjct: 369 FLEKTASRI----KTPYALYVLKREKQESLKGRLQTSMARVFSFSSLRQGGGQDRLVKSM 424

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILIN 488
            ++++   +     T  LQ+    + L++G+  +    +  +     L  +   +L  
Sbjct: 425 RNRLEEFRSMHRTLTERLQAATPFSALEKGFAILFHARDRTLVSPARLPHSGEILLAR 482


>gi|289167857|ref|YP_003446126.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis B6]
 gi|288907424|emb|CBJ22261.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis B6]
          Length = 446

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMNFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P     I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQPLPQFSNRIGVVTSRSGAVIRDIITTVSRRFPGIDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQ------QDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     ++ +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVQNVLSKKQESL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +R+     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHRLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DG+    V +    +
Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445


>gi|171463109|ref|YP_001797222.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171192647|gb|ACB43608.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 406

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 125/377 (33%), Positives = 203/377 (53%), Gaps = 14/377 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+   ++        SV +L+  +   +E     V V GEIS ++    SGH YFSLKD 
Sbjct: 1   MSEIPKQ------ILSVGDLNRAIAVSLEDRFDTVWVSGEISNFKSY-DSGHWYFSLKDE 53

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             +I  ++++G   ++ F+P+ G    V   +  +      Q+ I++L  +G G L  A 
Sbjct: 54  EGQIRCVMFRGRNGQVSFMPQSGDLVEVSASLGMYVPRGDIQLTIQTLRRAGMGGLYEAF 113

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
            K K KL +EGLF D+ K  IP  P+ I +ITSP  A ++D+L  ++ R P + ++I+P 
Sbjct: 114 LKLKAKLAKEGLFDDERKREIPTHPRSIGIITSPQAAALKDVLSTLARRAPQIPIVIYPT 173

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG + P  I +A+               D+I+L RGGGSIEDLW FNDE++  AIA+S
Sbjct: 174 LVQGPDAPAGIISALKA------AEEENAVDVILLVRGGGSIEDLWAFNDELLAYAIADS 227

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP++S +GHETD+T+AD+ ADLRAPTPTGAAE+A P ++ +   L  +   L   I + 
Sbjct: 228 LIPVVSGVGHETDFTIADFVADLRAPTPTGAAELAAPRRDQMLQELNAIMQALLQRIYQR 287

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           ++ +  TL+ L   L ++       R +++   + L     + +    R+ +H  ++++ 
Sbjct: 288 VERETQTLDQLALRLSHALPNPDRMREQIEGWQKRLHQAWSVRMENWRRNQSHYQSQLEM 347

Query: 360 DFLIHNIQKNRQHILEK 376
                 +++    IL K
Sbjct: 348 LNPQRTLERGYAVILNK 364



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  +L++   I Q + Q +      + + +  L +           +   I+    R+ 
Sbjct: 265 RRDQMLQELNAIMQALLQRIYQRVERETQTLDQLALRLSHALPNPDRMREQIEGWQKRLH 324

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRI 485
              S ++++   + S     L+    + TL+RGY  I + ++   + + +   L   +  
Sbjct: 325 QAWSVRMENWRRNQSHYQSQLEMLNPQRTLERGYAVILNKDSEGLHAVRKPSELKVSSGY 384

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            I   +GQA          + +
Sbjct: 385 QIRLAEGQAEVQFSEVIQTESK 406


>gi|325690179|gb|EGD32183.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK115]
          Length = 446

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG     
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  +   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAMSNRLTYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L  +L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLQLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSACIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|322385055|ref|ZP_08058705.1| exodeoxyribonuclease VII large subunit [Streptococcus cristatus
           ATCC 51100]
 gi|321270965|gb|EFX53875.1| exodeoxyribonuclease VII large subunit [Streptococcus cristatus
           ATCC 51100]
          Length = 446

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 159/494 (32%), Positives = 242/494 (48%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A IW G 
Sbjct: 5   LSVSTLTRYLKMKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATIWSGV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y I+IE   P G G L    E+ KKKL EEGL
Sbjct: 63  YKKLGFELEEGMKVNVIGRVQLYEPSGSYSIVIEKAEPDGIGALAVQFEQLKKKLGEEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQG+    E+A
Sbjct: 123 FQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAAEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 ANIRRANERED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESQIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  L   L   + RL+N     + Y+   L+ L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLGHLSQQQNRLSNAASNRLAYQRERLHKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LD+L   L+  +      + +  N + +R++S   +  +Q+
Sbjct: 297 ASSVIFRQPERLYDGYLQKLDQLNLRLKQKIREYYNEEVQQVNILQHRLESLSPLRQVQR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ + ++++ +   +     +   E K                                
Sbjct: 357 YQEQVHQQERLLRSNMAVIYDHKVAEAKR------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                            +  L        + RGY  IQ  N   I   +++  K ++ I 
Sbjct: 386 ----------------LSDALLMLDTSRIVARGYAIIQ-KNETVIESSQDIKKKDQLTIL 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V +  
Sbjct: 429 MRDGQVQVEVKDVK 442


>gi|168491128|ref|ZP_02715271.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|183574389|gb|EDT94917.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           CDC0288-04]
          Length = 446

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I   IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL+E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLIE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNRQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAETKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V N    +
Sbjct: 426 TLLMRDGQVELEVKNVKTKE 445


>gi|145588475|ref|YP_001155072.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046881|gb|ABP33508.1| Exodeoxyribonuclease VII large subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 408

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 125/393 (31%), Positives = 202/393 (51%), Gaps = 9/393 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SV +L+  +   +E     V V GEIS ++    SGH YFSLKD   +I  +++
Sbjct: 4   MTREILSVGDLNRAIAASLEDRFDTVWVSGEISNFKAY-DSGHWYFSLKDEEGQIRCVMF 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G   ++ F+P+ G    V   +  +      Q+ I++L  +G G L  A  K K KL +
Sbjct: 63  RGRNGQVGFMPQSGDLVEVSASLGMYVPRGDIQLTIQTLRRAGMGGLYEAFLKLKAKLAK 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF +  K  IP  P+ I +ITSP  A ++D+L  ++ R P + ++I+P  VQG +   
Sbjct: 123 EGLFDEGRKREIPTHPRSIGIITSPQAAALKDVLSTLARRAPHIPIVIYPTLVQGPDASA 182

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I  A+               D+I+L RGGGSIEDLW FNDE +  AIA SSIP++S +G
Sbjct: 183 GIIKALKA------AEKEQAVDVILLVRGGGSIEDLWAFNDEQLAYAIAQSSIPVVSGVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ ADLRAPTPTGAAE+A P K+ +   L  ++  L   I + I+ +  TL+
Sbjct: 237 HETDFTIADFVADLRAPTPTGAAELAAPRKDQMLQELEAIKQALLQRINQRIEREAQTLD 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L   L ++       R ++    + L     + +    R+  +  ++++       +++
Sbjct: 297 QLALRLSHALPNPDRMREQIAGWQQRLNQAWSVRMENWKRNQTYYQSQLEMLNPQRTLER 356

Query: 369 NRQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIA 400
               IL K+   +  +            + ++A
Sbjct: 357 GYAVILNKENDQLHAVRNPAELNTQNTYQIRLA 389



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 6/169 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +       +  Q +E I +  L+ I    + +   L 
Sbjct: 237 HETDFTIADFVADLRAPTPTGAAELAAPRKDQMLQELEAIKQALLQRINQRIEREAQTLD 296

Query: 404 MLREQTKNRI---FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            L  +  + +     +   I     R+    S ++++   + +     L+    + TL+R
Sbjct: 297 QLALRLSHALPNPDRMREQIAGWQQRLNQAWSVRMENWKRNQTYYQSQLEMLNPQRTLER 356

Query: 461 GYTSIQDTNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           GY  I +  N   + +     L T+    I    G+ +  V   A    
Sbjct: 357 GYAVILNKENDQLHAVRNPAELNTQNTYQIRLAGGRVDIRVAEVAKANS 405


>gi|25010611|ref|NP_735006.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae
           NEM316]
 gi|77414008|ref|ZP_00790180.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           515]
 gi|31563132|sp|Q8E6M1|EX7L_STRA3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|23094965|emb|CAD46186.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159934|gb|EAO71073.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           515]
          Length = 446

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQSGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  IP   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N           D++I+ RGGGSIEDLW FN+E +V AI  S +P+IS++GHET
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  + S +   E R+    +RLI+ K   L   
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L ++L +++   +    +    +  +++   L   I  
Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +++ ++ +   +                                            
Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N+  ++    +     + + 
Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428

Query: 489 FFDGQANAIVINK 501
             DG     V + 
Sbjct: 429 MQDGLLEVEVKDV 441


>gi|218512834|ref|ZP_03509674.1| exodeoxyribonuclease VII large subunit [Rhizobium etli 8C-3]
          Length = 239

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 145/239 (60%), Positives = 186/239 (77%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +  +  EYSVSELS  +K  VE+    V VRGEISGYRG HSSGHAYF+LKD+ +RIDA+
Sbjct: 1   SPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRARIDAV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           IWKGT ++++F PEEG+E +  GK+TTFPGSSKYQI+IE+L P+G+G L+  +E+RK+KL
Sbjct: 61  IWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEERKRKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187
             EGLF    K  +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG+   
Sbjct: 121 GAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQGEGAG 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            E+ANAI   N L+ G    RPD++I+ARGGGS+EDLW FNDE++VRA A S IP+ISA
Sbjct: 181 DEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPLISA 239


>gi|312143728|ref|YP_003995174.1| exodeoxyribonuclease VII, large subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311904379|gb|ADQ14820.1| exodeoxyribonuclease VII, large subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 418

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 206/371 (55%), Gaps = 12/371 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +   Y+V E++ +L+ +++ +  LS   + GEIS +   H SGH YF+LKD ++++  ++
Sbjct: 14  EKKIYTVQEITEYLQSLIKEDTLLSDFYITGEISNF-YHHGSGHMYFTLKDENTQLKTVM 72

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG  + ++F PE+G++    G +  +P   +YQ     +  +G G L  A EK KK L 
Sbjct: 73  FKGYNSSLDFEPEDGMQVTARGNLDIYPQRGEYQFYAREMEEAGKGDLYAAYEKLKKALK 132

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           EEGLF    K  IP +   I ++TSPTGA IRDIL  +  R     V+I P  VQG +  
Sbjct: 133 EEGLFEADKKKEIPKLASKIGIVTSPTGAAIRDILSVMKRRSGDFSVLIVPTHVQGKQAA 192

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            EI  AI  LN+          D+II++RGGGSIEDLW FN+E +VRAI NS +P+IS +
Sbjct: 193 GEIKQAIEYLNSR------DDIDLIIVSRGGGSIEDLWAFNEEEVVRAIYNSRLPVISGV 246

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE+D+ ++D+ ADLRAPTP+ AAE+A   +E +   L +L  RL N     +K K   +
Sbjct: 247 GHESDFCISDFVADLRAPTPSAAAELATANREEMLDKLKSLSQRLINTTSNELKQKQQKI 306

Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            S+   +     ++       +LD L   L + +E  +      +N +  ++ S   +  
Sbjct: 307 KSIAERRIFMRPEEIFRDYELKLDNLETTLNYQIEKQLKSWENKYNLLQQKLSSLSPLKT 366

Query: 366 IQKNRQHILEK 376
           +++    + ++
Sbjct: 367 LERGYSILQDQ 377



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 2/140 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITR 426
           NR+ +L+K + + Q +         +K++KI  +   R   + +         +  L T 
Sbjct: 276 NREEMLDKLKSLSQRLINTTSNELKQKQQKIKSIAERRIFMRPEEIFRDYELKLDNLETT 335

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           + + +  ++KS     ++  + L S +   TL+RGY+ +QD     +    N+ +   + 
Sbjct: 336 LNYQIEKQLKSWENKYNLLQQKLSSLSPLKTLERGYSILQDQTEKTVNSVDNIKSGDLLT 395

Query: 487 INFFDGQANAIVINKAPPKE 506
               DG+A   V +     E
Sbjct: 396 ARLIDGKAKLKVNSTEKAGE 415


>gi|306829641|ref|ZP_07462831.1| exodeoxyribonuclease VII large subunit [Streptococcus mitis ATCC
           6249]
 gi|304428727|gb|EFM31817.1| exodeoxyribonuclease VII large subunit [Streptococcus mitis ATCC
           6249]
          Length = 446

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 149/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K PIP   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQPIPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDLLLYPTKVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +PIIS++G
Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     ++ +  +   + 
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMTTAVQNVLSRKKEVL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I           +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSKHLVQVRTHQLVQLSPVPK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLAQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++      +     L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-TVVDSVEKLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|253576319|ref|ZP_04853649.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844212|gb|EES72230.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 317

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 123/281 (43%), Positives = 174/281 (61%), Gaps = 10/281 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
                      +V EL+ +++  +ES+  L+ V +RGEIS +   HSSGH YF+LKD  S
Sbjct: 41  EAAPLDQQRILTVKELNRYIRMKLESDQVLTDVWIRGEISNFTH-HSSGHMYFTLKDADS 99

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           RI +I++     ++ F P+EG   +  G ++ +    +YQ  +  + P G G+L  A E+
Sbjct: 100 RIKSIMFASYNQRLPFRPKEGTRVIARGNVSVYERDGQYQFYVTHMQPDGVGSLYLAFEQ 159

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K+KL  EGLF+   K P+P  PK I V+TSPTGA +RDIL  +  R+P   VI++PV V
Sbjct: 160 LKQKLEAEGLFAPGRKRPLPRFPKTIGVVTSPTGAAVRDILTTLGRRYPQAAVILYPVLV 219

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG      I  AI  LN + E       D++I+ RGGGS+E+LW FN+E + RAI  S+I
Sbjct: 220 QGKGAAPSIVKAIRTLNAMGEA------DVLIVGRGGGSLEELWAFNEEQVARAIYESAI 273

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           P+ISA+GHETD+T+AD+ ADLRA TPT AAE+AVP    L+
Sbjct: 274 PVISAVGHETDFTIADFVADLRAATPTAAAELAVPHTAELR 314


>gi|294669569|ref|ZP_06734636.1| hypothetical protein NEIELOOT_01470 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308482|gb|EFE49725.1| hypothetical protein NEIELOOT_01470 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 403

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 11/399 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K+++E NL+ + + GE+S      +SGH YFSLKD+H+++   ++KGT  
Sbjct: 10  LSVSELNRLAKNLLEDNLAGLWIAGEVSNLT-RAASGHYYFSLKDSHAQVRCAMFKGTAQ 68

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     +EG    V G+I  +    ++QI +  +   G G L  A E+ K  L  EGLF+
Sbjct: 69  RFP-ALKEGDHIEVCGRIGIYEARGEFQITVSEVRLKGLGRLYEAYERLKAVLQGEGLFA 127

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+P  P+ I V+TS   A +RD++  +  R P + VI++P  VQG +   +IA A
Sbjct: 128 AERKRPLPERPERIGVVTSLAAAALRDVVSTLKRRAPEIPVIVYPAAVQGADSAAQIARA 187

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +   E       D++I+ RGGGSIEDLW FN+E + RAIA   IP++S +GHETD+
Sbjct: 188 VQTASERAE------CDVLIVCRGGGSIEDLWSFNEEPVARAIAACRIPVVSGVGHETDF 241

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD+AAD+RAPTPTGAAE+  P +     SL   E RL   + +        ++ L + 
Sbjct: 242 TLADFAADVRAPTPTGAAELVSPNRAESLQSLRQAEGRLKETLRQRYYDASQKIDWLSRQ 301

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           + +  Q L   R + + L R+L ++L+ +   + ++       ++              +
Sbjct: 302 IRHPRQKLDAQRVQAETLSRQLRYSLQTVCRFQRQNVARQSQLLRHLRPDTRQADAW--L 359

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
            + Q  + +  ++ +       + + A     R     R
Sbjct: 360 AQLQADLARGRRRIMADKAQLLENRPACCRPCRRSIFWR 398



 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           NR   L+  +  E  +K+ LR  + +  +KI  L       + ++       + L  ++ 
Sbjct: 265 NRAESLQSLRQAEGRLKETLRQRYYDASQKIDWLSRQIRHPRQKLDAQRVQAETLSRQLR 324

Query: 429 FILSHKIKSCHTSVSITTRILQSFAY------------KNTLKRG 461
           + L    +    +V+  +++L+                +  L RG
Sbjct: 325 YSLQTVCRFQRQNVARQSQLLRHLRPDTRQADAWLAQLQADLARG 369


>gi|332203059|gb|EGJ17127.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA47901]
          Length = 446

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R    S H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKR--STHQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDALTHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + ++  +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|296110656|ref|YP_003621037.1| exodeoxyribonuclease VII, large subunit [Leuconostoc kimchii IMSNU
           11154]
 gi|295832187|gb|ADG40068.1| exodeoxyribonuclease VII, large subunit [Leuconostoc kimchii IMSNU
           11154]
          Length = 428

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 148/507 (29%), Positives = 228/507 (44%), Gaps = 88/507 (17%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64
           S  +   ++S L+ +LK   +++  L  V V GEIS   G     H YFS+KD +  + I
Sbjct: 2   SEANKYLTISALTAYLKRKFDADPYLEKVYVTGEISNI-GRRRGRHLYFSIKDPNGHAVI 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            A ++    ++++F PEEG++   IG++  +  S  Y II+E + P G G L  A E+ K
Sbjct: 61  SAAMF-SYASRLKFDPEEGMKINAIGRVQIYEPSGTYAIILEQMAPDGIGELFLAYEQLK 119

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           +KL  EGLF    K  IP  PK IAV+TSPTGAVI DI++ +  RFP  +V++FP  VQG
Sbjct: 120 RKLSAEGLFDLPKK-HIPLFPKRIAVVTSPTGAVIEDIVRTVQRRFPSAQVVLFPAVVQG 178

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           D+    I   IL+++         + D +I+ RGGGSIEDLW FNDE + R IA + +P+
Sbjct: 179 DKASTTIIKQILRIDA------SNQYDTLIVGRGGGSIEDLWAFNDEKLARTIAATQLPV 232

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS-SLINLEARLNNIIIRLIKY 302
           IS++GHETD TL D+ AD RA TPT AAE+A PV        L  L+ RLN  + +LI  
Sbjct: 233 ISSVGHETDNTLVDFVADKRAATPTAAAELATPVTLTQLVSRLNELQVRLNLRMKQLIDN 292

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +  +++ + +       D+  S    R+D+L   L   L   +         +       
Sbjct: 293 RRQSVDRVAQHVIFQQPDRLYSGYNQRVDQLSHTLNQLLHQRLVSTQHQLTTLA------ 346

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                                              + +  I   + +Q + ++  L   +
Sbjct: 347 -----------------------------------QRQSQIRQNILQQPREKVQLLAAKL 371

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                           +    L RGY  I+  +   I   + + 
Sbjct: 372 -----------------------------DLMSPLKILTRGYVLIE-KDGQVIRNIKEVH 401

Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507
               + +   +G A A +I     K +
Sbjct: 402 PDDEVELRLANGSATAKIIETRVLKSE 428


>gi|77405297|ref|ZP_00782393.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           H36B]
 gi|77176092|gb|EAO78865.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           H36B]
          Length = 446

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 228/493 (46%), Gaps = 62/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  IP   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N           D++I+ RGGGSIEDLW FN+E +V AI  S +P+IS++GHET
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  + S +   E R+    +RLI+ K   L   
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L ++L  ++   +    +    +  +++   L   I  
Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTFSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHT 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +++ ++ +   +                                            
Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N+  ++    +     + + 
Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428

Query: 489 FFDGQANAIVINK 501
             DG     V + 
Sbjct: 429 MQDGLLEVEVKDV 441


>gi|22536675|ref|NP_687526.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae
           2603V/R]
 gi|76787645|ref|YP_329229.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae
           A909]
 gi|76799068|ref|ZP_00781260.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
 gi|31563130|sp|Q8E166|EX7L_STRA5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|123758108|sp|Q3K2M4|EX7L_STRA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|22533515|gb|AAM99398.1|AE014214_12 exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           2603V/R]
 gi|76562702|gb|ABA45286.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           A909]
 gi|76585583|gb|EAO62149.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
          Length = 446

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  IP   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N           D++I+ RGGGSIEDLW FN+E +V AI  S +P+IS++GHET
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  + S +   E R+    +RLI+ K   L   
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L ++L +++   +    +    +  +++   L   I  
Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +++ ++ +   +                                            
Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N+  ++    +     + + 
Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428

Query: 489 FFDGQANAIVINK 501
             DG     V + 
Sbjct: 429 MQDGLLEVEVKDV 441


>gi|294140153|ref|YP_003556131.1| exodeoxyribonuclease VII large subunit [Shewanella violacea DSS12]
 gi|293326622|dbj|BAJ01353.1| exodeoxyribonuclease VII, large subunit [Shewanella violacea DSS12]
          Length = 319

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 112/302 (37%), Positives = 169/302 (55%), Gaps = 8/302 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +  +  Y+VS L+  ++ ++E  L  + +  EIS +     SGH Y +LKDN +++   +
Sbjct: 3   TPKNNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNQAQVRCAM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG    + F P  G + LV G I+ +     YQ+IIES++P+G G L    E  K KL 
Sbjct: 62  FKGRNRSVTFKPINGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGLLAQQYEALKMKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K PIP   + I VITS TGA ++D+L  ++ R P + V+I+P +VQG+   
Sbjct: 122 AEGLFAADTKRPIPSNIQKIGVITSATGAALKDVLHVLARRDPSIEVVIYPTQVQGEPAV 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           ++I NAI   N  +E       D+++L RGGGS+EDLW FN E +   I NS++PIISA+
Sbjct: 182 QQICNAIAMANARQE------VDVLLLTRGGGSLEDLWCFNSEELAHEIYNSALPIISAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T++DY AD+RAPTP+  AE+     E+       +  +    +  L        
Sbjct: 236 GHEIDTTISDYVADMRAPTPSAGAELLSKDAENKGGETRVIYRKAQTELAALSAQSQQPH 295

Query: 308 NS 309
             
Sbjct: 296 EY 297


>gi|268608469|ref|ZP_06142196.1| probable exodeoxyribonuclease VII large subunit [Ruminococcus
           flavefaciens FD-1]
          Length = 404

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 121/361 (33%), Positives = 191/361 (52%), Gaps = 12/361 (3%)

Query: 13  PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           P  +V++++ ++  I+  + NL  V V+GEIS +     SGH YF+LKD+ S +  +++ 
Sbjct: 2   PVITVTQINKYIGSILKGDRNLQGVMVKGEISNFTLHWKSGHMYFTLKDSESAVKCVMFA 61

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++ F PE+G+  +  G I  F     YQ+ +  ++P G+G    ALE+ KKKL +E
Sbjct: 62  SAAARLRFAPEDGMSVICRGSINVFERDGAYQLYVNDILPEGAGAAGVALEQLKKKLAKE 121

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           G+F+ +HK P+P++PK I  +TS +GA +RDI+  +S R+PL  V      VQG+  P  
Sbjct: 122 GIFAPEHKRPVPYMPKKIGAVTSLSGAAVRDIINVLSRRYPLCEVYAVNALVQGEGAPDS 181

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   IL+             D+II+ RGGGS EDL  FN E +  A+ N  +P+ISA+GH
Sbjct: 182 ICQGILRAEAA-------GCDVIIVGRGGGSSEDLSAFNTEKVAYAVYNCKVPVISAVGH 234

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD ++AD AADLRAPTP+ AAE+A P        +  L+ R        +    +    
Sbjct: 235 ETDISIADMAADLRAPTPSAAAELAAPDISTFYEKIDMLQRRAERSAFAALDRAADRFTV 294

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   + +  +  S  RL  L +      +  + R     +  I R++S   +  + 
Sbjct: 295 LNAKLAAQSPENRMKLSGERLSALEKRNSAAFQRYMERLSSQLSERIGRLESLSPLKVLS 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 6/168 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    +   +++       +     I    + I+ + ++  R  F           
Sbjct: 234 HETDISIADMAADLRAPTPSAAAELAAPDISTFYEKIDMLQRRAERSAFAALDRAADRFT 293

Query: 404 MLR-----EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +L      +  +NR+      +  L  R        ++   + +S     L+S +    L
Sbjct: 294 VLNAKLAAQSPENRMKLSGERLSALEKRNSAAFQRYMERLSSQLSERIGRLESLSPLKVL 353

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            RGY+ +   +   ++    ++    + I F  G A+A +      K+
Sbjct: 354 SRGYSLVYSGD-RLLSSTDGISVGDTVDIRFGKGTASAEIKEVHEEKQ 400


>gi|160880646|ref|YP_001559614.1| exodeoxyribonuclease VII, large subunit [Clostridium
           phytofermentans ISDg]
 gi|189037848|sp|A9KMC1|EX7L_CLOPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|160429312|gb|ABX42875.1| exodeoxyribonuclease VII, large subunit [Clostridium
           phytofermentans ISDg]
          Length = 401

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 126/361 (34%), Positives = 199/361 (55%), Gaps = 13/361 (3%)

Query: 12  HPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSV++++ ++K++   +  L+ + ++GE+S  +  H+SGH YF+LKD   ++  +++
Sbjct: 2   EQVYSVTQVNNYIKNMFVKDYVLNRIYMKGEVSNCK-YHTSGHIYFTLKDETGQMACVLF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F  EEG   +V+G I+ +    KYQ+  + +   G G L    E  K+KL E
Sbjct: 61  AGYRTGLPFRLEEGQSVIVLGSISVYERDGKYQLYAKEIKLDGLGLLYERFELLKRKLNE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF   HK  +   P+ + ++T+ TGA I+DI+     R P ++++++P KVQG+   K
Sbjct: 121 EGLFDPSHKKTLVPYPRTVGIVTASTGAAIQDIINISKRRNPYVQLVLYPAKVQGEGAAK 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L            D II+ RGGGSIEDLW FN+EM+ RAI + SIPIISA+G
Sbjct: 181 TIVAGIKALEA-------KGVDTIIVGRGGGSIEDLWAFNEEMVARAIFDCSIPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T++D+ +DLRAPTP+ AAE+AVP  E L S+L++    L   ++R I    + L 
Sbjct: 234 HETDITISDFVSDLRAPTPSAAAELAVPEIESLLSNLVDYHYSLVQCVMRKITMARSELE 293

Query: 309 SLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                L +      L   R     L  +L   +  +I  K    +  I R+K+   +  +
Sbjct: 294 KKQLQLTHLSPVYALRQKRQYTIDLENKLRQRMNELIRYKRHLLDIQIERLKAASPLDKL 353

Query: 367 Q 367
           +
Sbjct: 354 K 354



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 48/135 (35%), Gaps = 2/135 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
           ++++    + Q V + +     E ++K   L  L       +     +   L  ++   +
Sbjct: 269 NLVDYHYSLVQCVMRKITMARSELEKKQLQLTHL--SPVYALRQKRQYTIDLENKLRQRM 326

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           +  I+     + I    L++ +  + LK G++ + D++   +           + I   D
Sbjct: 327 NELIRYKRHLLDIQIERLKAASPLDKLKSGFSYVSDSSGKVVNSITKTKPGDELTIAVTD 386

Query: 492 GQANAIVINKAPPKE 506
           G   A  I     + 
Sbjct: 387 GMIKAKTIGVESIER 401


>gi|77412381|ref|ZP_00788691.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           CJB111]
 gi|77161569|gb|EAO72570.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           CJB111]
          Length = 446

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  IP   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITIVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N           D++I+ RGGGSIEDLW FN+E +V AI  S +P+IS++GHET
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +  + S +   E R+    +RLI+ K   L   
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L ++L +++   +    +    +  +++   L   I  
Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +++ ++ +   +                                            
Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N+  ++    +     + + 
Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428

Query: 489 FFDGQANAIVINK 501
             DG     V + 
Sbjct: 429 MQDGLLEVEVKDV 441


>gi|301800134|emb|CBW32738.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           pneumoniae OXC141]
          Length = 446

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SRIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|302874809|ref|YP_003843442.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulovorans
           743B]
 gi|307690574|ref|ZP_07633020.1| exodeoxyribonuclease VII large subunit [Clostridium cellulovorans
           743B]
 gi|302577666|gb|ADL51678.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulovorans
           743B]
          Length = 403

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 12/371 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VSEL+ ++K +V+++  L +  ++GEIS  + IHSSGH YFSLKD  S+I A+
Sbjct: 1   MFSKVLTVSELNSYIKRVVDNDYILKNSRIKGEISNLK-IHSSGHIYFSLKDEDSKISAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     I F P+ G+   V G+++ +     YQI IE +   G G L  A E+ K KL
Sbjct: 60  MFRSYGENISFQPQNGMNVEVKGRVSVYIKDGAYQIYIEEMKIDGLGDLNKAYEELKAKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           L EGLF D +K P+P  P  IAV+TSPTGA IRDI+  IS R P + + IFP  VQG   
Sbjct: 120 LREGLFDDTYKKPLPINPISIAVVTSPTGAAIRDIINVISRRNPYVDIKIFPTLVQGIHA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I +AI   N           ++IILARGGGSIE+LW FN+E++  AI NS  PII+ 
Sbjct: 180 AANIESAIKAAN------NESSTELIILARGGGSIEELWAFNEEVVAYAIHNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+AD+A+D RA TP+ AAE+AV     +   L   + +L + I R  + + + 
Sbjct: 234 IGHETDFTIADFASDKRASTPSAAAEIAVTSFVEIDDKLNYYKHKLYSAIKRNFEMEKSR 293

Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            N L   L        ++     +D     L   +E  +  +     ++ + + ++  + 
Sbjct: 294 TNILASKLKQYNPVAYIANQYTFIDGYKVRLNKAIENNLKFQKNRLVYLNSMLNANNPLG 353

Query: 365 NIQKNRQHILE 375
            I K    +  
Sbjct: 354 IISKGYSILRN 364



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 38/98 (38%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           +  I    + +      I   +T I     R+   + + +K     +     +L +    
Sbjct: 293 RTNILASKLKQYNPVAYIANQYTFIDGYKVRLNKAIENNLKFQKNRLVYLNSMLNANNPL 352

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
             + +GY+ +++ +   I+ K  LA + ++ +   DG 
Sbjct: 353 GIISKGYSILRNEDGKVISTKVALAEEKKVEVILQDGS 390


>gi|238924570|ref|YP_002938086.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale ATCC
           33656]
 gi|238876245|gb|ACR75952.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale ATCC
           33656]
          Length = 406

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/365 (31%), Positives = 197/365 (53%), Gaps = 14/365 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +   YSV++++ ++K++   +     V ++GE+S  +  H+SGH YF++KD  + ++AI
Sbjct: 2   ANRNIYSVAQVNSYIKNMFAQDFMLRQVSIKGEVSNCK-YHTSGHIYFTIKDAGAAMNAI 60

Query: 68  IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++ G     + F  +EG + +V G +  +  +  YQ+  + +   G G L    E+ K +
Sbjct: 61  MFAGSRAAGLSFHMKEGDQVIVTGSVEVYEKTGAYQLYAKKIELDGEGNLYLKFEQLKHE 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L E G+F+ ++K PIP     I V+T+PTGA ++DI    S R P ++VI++P  VQG+ 
Sbjct: 121 LEEMGMFAAEYKQPIPQYAGRIGVVTAPTGAAVQDIRNVSSRRNPYVQVILYPALVQGEG 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I   I  L+ +         D+II+ RGGGSIEDLW FN+E++ RAI +   PIIS
Sbjct: 181 AANSIVKGIQTLDAM-------NLDVIIVGRGGGSIEDLWAFNEEIVARAIFDCRTPIIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWT+AD+ +D RAPTP+ AAE+AV         L NL  R++  +   I +   
Sbjct: 234 AVGHETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLCRRMDRNLTGRIDFFRE 293

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ +   L   +    L+ ++ RL  +   LE  ++  +    +    +   + +    
Sbjct: 294 KLSHIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPA 353

Query: 364 HNIQK 368
             + +
Sbjct: 354 KKLAQ 358



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 60/170 (35%), Gaps = 5/170 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY---IFLEKKEKIA 400
                     ++  ++       +       +  + ++ + ++  R         +EK++
Sbjct: 237 HETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLCRRMDRNLTGRIDFFREKLS 296

Query: 401 ILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +         +N++      +  +   +E I+  ++  C   +++ +  L +++    L
Sbjct: 297 HIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPAKKL 356

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
            +GY  ++      +    ++     I I   DG A A+V      +++ 
Sbjct: 357 AQGYAYVEVEKKGALHSVSDINAGDDINIYLIDGHARAVVSEVINDEQRK 406


>gi|83814944|ref|YP_444876.1| exodeoxyribonuclease VII, large subunit [Salinibacter ruber DSM
           13855]
 gi|123753439|sp|Q2S4K5|EX7L_SALRD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|83756338|gb|ABC44451.1| exodeoxyribonuclease VII, large subunit [Salinibacter ruber DSM
           13855]
          Length = 398

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 5/364 (1%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SV+EL+  L  +VE     V V GE+S +    +SGH YFSLKD  ++I  ++WK    
Sbjct: 2   LSVAELTRGLSDLVEDRYDDVWVEGELSDFT-RAASGHCYFSLKDEDAQIRCVMWKHLTQ 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F PEEG++  V G  + +      QI  +++  +G G    A E+ K+ L  EGLF+
Sbjct: 61  YVYFEPEEGMQVRVNGHASVYERRGDLQIQAQAMRQAGKGAQQKAFEELKQTLQAEGLFA 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
            + K  +P  P  I V+TS  GA I DI   ++ RF P  V++ PVKVQG + P+ +A+A
Sbjct: 121 PERKQALPAFPDTIGVVTSGQGAAIHDIQSGLARRFPPAEVVLCPVKVQGLDAPRAVADA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   N L       RPD++I+ RGGGS EDLW FN+E++ RA+  S++P++SA+GHE+D 
Sbjct: 181 VAAFNDLPADDAQ-RPDLLIVGRGGGSTEDLWAFNEEVVARALDASNLPVVSAVGHESDV 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SLL 311
           T+AD  AD RA TP+ AAE  VP +  +   +  L  RL + +   ++     ++     
Sbjct: 240 TIADLVADERAATPSAAAERVVPDRRDVADRVRALHDRLRSRVTGRLQDARQRVDALVAS 299

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +A     + L   R  LD L   L       + R      H+ +R+ +      +++   
Sbjct: 300 RAFHAPARRLEQHRQHLDALVDRLGRGGARAVDRARTRLAHLRDRLHALDPEQPLRRGYV 359

Query: 372 HILE 375
           H+ +
Sbjct: 360 HLTQ 363



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 56/142 (39%), Gaps = 3/142 (2%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYL 416
                  +  +R+ + ++ + +   ++  +     + ++++  L   R       R+   
Sbjct: 253 PSAAAERVVPDRRDVADRVRALHDRLRSRVTGRLQDARQRVDALVASRAFHAPARRLEQH 312

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
             H+  L+ R+    +  +    T ++     L +   +  L+RGY  +   +   +   
Sbjct: 313 RQHLDALVDRLGRGGARAVDRARTRLAHLRDRLHALDPEQPLRRGYVHLT-QDGTSVQSA 371

Query: 477 RNLATKTRILINFFDGQANAIV 498
            +L    R+ ++F DG+ +A V
Sbjct: 372 ESLQDGDRVRLHFQDGRRDAEV 393


>gi|51892984|ref|YP_075675.1| exodeoxyribonuclease VII large subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51856673|dbj|BAD40831.1| exodeoxyribonuclease VII large subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 415

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 125/359 (34%), Positives = 207/359 (57%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V EL+ ++K +++ +  L  V V+GEIS ++  H SGH YF+LKD  +++  ++++  
Sbjct: 14  LTVRELTRYVKDLLDEDPLLRSVWVQGEISNFKWHH-SGHIYFTLKDEVAQVKVVMFRSY 72

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            N++ F PE G++ +V G +T F     YQ+   ++ P G G L    E+ K++L  EGL
Sbjct: 73  ANRLRFRPENGMQVIVQGNVTVFERDGVYQLYAAAMEPYGLGALHLEFEQLKRRLAAEGL 132

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F +  K PIP +P+ + ++T+PTGA IRD++     RFP +R+++ P  VQG + P+ + 
Sbjct: 133 FDEALKRPIPSLPRAVGLVTAPTGAAIRDMITVARRRFPGMRLVLAPALVQGPDAPESLI 192

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+  +         P  D++I+ RGGGS+EDLW FNDE + RAI    +P++SA+GHET
Sbjct: 193 RALGLVAR------VPEVDVVIIGRGGGSLEDLWAFNDERLARAIRACPVPVVSAVGHET 246

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNS 309
           D+T+AD+AADLRAPTP+ AAE+ VP +  L   +  L  RL+    R ++ +       +
Sbjct: 247 DYTIADFAADLRAPTPSAAAELVVPSRSELLGVVDGLRIRLSTAARRSVERRRIRLRALT 306

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               L      +   R RLD L R LE+    ++  + R    +  R+++   +  + +
Sbjct: 307 ERPVLQRPQGRVLQDRQRLDGLVRRLEYLGGSLLAARRRELGGLAGRLEALSPLAVLAR 365



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 39/132 (29%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            I               + +      + ++ + R+      +  L+ R+E++    + + 
Sbjct: 284 RIRLSTAARRSVERRRIRLRALTERPVLQRPQGRVLQDRQRLDGLVRRLEYLGGSLLAAR 343

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
              +      L++ +    L RGY   +      +     L    R+ +    G     V
Sbjct: 344 RRELGGLAGRLEALSPLAVLARGYAIARTEEGRVVKDAAQLQVGDRLDVLLHRGSVRCQV 403

Query: 499 INKAPPKEQPTK 510
                   + T+
Sbjct: 404 EEIRGDAGEGTR 415


>gi|332074821|gb|EGI85293.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA41301]
          Length = 446

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 232/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAIIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE + P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                      S++       RLD+L   L+ +L   I    +  +   +++     +  
Sbjct: 294 KKCSQSVIFRQSERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVHARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|325697089|gb|EGD38976.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK160]
          Length = 446

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL  
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|296532674|ref|ZP_06895369.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296266996|gb|EFH12926.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 294

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 123/283 (43%), Positives = 182/283 (64%), Gaps = 4/283 (1%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+  ++     + PE++VSE+S  +K  +E     V VRGEI+  +    SGH Y +LKD
Sbjct: 1   MDLDAEAPPRSNTPEFTVSEISGAIKRTLEGEFGRVRVRGEITELKAYP-SGHIYLALKD 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             ++I  IIW+  + ++   PE G+E +  GK++++   S YQ+II+ +  +G G LL  
Sbjct: 60  EGAKIRGIIWRFAVPRLSLRPENGMEVIATGKVSSYGERSDYQLIIDRIEFAGEGALLAR 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179
           +E+ +KKL  EGLF +  K P+P +P+++ V+TS  GAVI+DI   I+ RFP  ++++PV
Sbjct: 120 IEQLRKKLGAEGLFDEARKKPLPLLPRLVGVVTSEKGAVIQDIRTTIARRFPRPILLWPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    ++IA AI   + L  G   P  D++I+ARGGGS+EDL  FNDE ++RA A  
Sbjct: 180 PVQGQGAAQQIAAAIDGFSRLPPGIERP--DVLIVARGGGSLEDLMAFNDEAVLRAAAAC 237

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
            IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVP +  L 
Sbjct: 238 PIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPARAELL 280


>gi|225377102|ref|ZP_03754323.1| hypothetical protein ROSEINA2194_02747 [Roseburia inulinivorans DSM
           16841]
 gi|225211007|gb|EEG93361.1| hypothetical protein ROSEINA2194_02747 [Roseburia inulinivorans DSM
           16841]
          Length = 401

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 193/360 (53%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++   +     + V+GE+S  +  HSSGH YF+LKD    I+AI++ G
Sbjct: 5   VYSVGQVNTYIKNMFAQDFMMQRISVKGEVSNCK-YHSSGHIYFTLKDPAGTINAIMFAG 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  +EG + +V G +  +    KYQ+    +   G+G L    E  KK+L E G
Sbjct: 64  NRRGLSFQMKEGDKVIVTGSVEVYERDGKYQLYAREIELDGAGNLYLKFEALKKELEEMG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+ ++K  IP   + + ++T+PTGA ++DI    + R P +++I++P  VQG+     I
Sbjct: 124 MFAPEYKKRIPTYIRRLGIVTAPTGAAVQDIRNISARRNPYVQLILYPALVQGEGAVSSI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I  L+ L         D+II+ RGGGSIEDLW FN+E + RAI     P+ISA+GH+
Sbjct: 184 VNGIRALDAL-------GVDVIIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHQ 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+AV   +   + +    AR+N  + + +      +N  
Sbjct: 237 TDTTIADFVADLRAPTPSAAAELAVFDHQAAVAEISAKTARMNRALQQKLDIAKLKVNQY 296

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   + +  L   R     L  +L   +E ++  K      +  +++    +  + +
Sbjct: 297 QTKLQYVSPESRLHEHRRYAVDLEEKLYRQMEQVLTEKKHRLAILTGQMEGVSPLKKLSQ 356



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 2/130 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I  K   + + ++Q L    L+  +    L  +    ++R+     +   L  ++   +
Sbjct: 270 EISAKTARMNRALQQKLDIAKLKVNQYQTKLQYV--SPESRLHEHRRYAVDLEEKLYRQM 327

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
              +      ++I T  ++  +    L +G++ + D     +T    +     + ++   
Sbjct: 328 EQVLTEKKHRLAILTGQMEGVSPLKKLSQGFSYVADETGKAVTDASTVKVGDPLTVHLLK 387

Query: 492 GQANAIVINK 501
           G   A V   
Sbjct: 388 GTLKANVTEV 397


>gi|319947472|ref|ZP_08021704.1| exodeoxyribonuclease VII large subunit [Streptococcus australis
           ATCC 700641]
 gi|319746412|gb|EFV98673.1| exodeoxyribonuclease VII large subunit [Streptococcus australis
           ATCC 700641]
          Length = 446

 Score =  292 bits (746), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 149/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVWAGI 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                F  EEG++  VIG+I  +  S  Y I+IE   P G G L    E+ KKKL EEGL
Sbjct: 63  YKSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLQEEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K  IP     I VITS +GAVIRDI+  ++ RFP + +++FP KVQG+   +EI 
Sbjct: 123 FQEKFKQAIPQFSNKIGVITSQSGAVIRDIITTVTRRFPGVEILLFPTKVQGEGAAQEIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N   +       D++I+ RGGGSIEDLW FN+E +VRAI  S +PIIS++GHET
Sbjct: 183 ANIQKANARTD------LDVLIIGRGGGSIEDLWAFNEEPVVRAIFESRVPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA-RLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A PV +    + +  +  R+   +   + Y    L  L
Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLNHLQKQEGRMATAMRNRLVYNRERLQKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       ++D++   L+  +   + R  R    + +R+ S    H +++
Sbjct: 297 SQSVIFRQPERLYDSYLQKIDQIQLRLKQAVSESVTRNSRQLQELRHRLASQAPQHQLER 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  IL+ ++ +   +K+  +    + K                                
Sbjct: 357 YRDQILQMERLMTLKIKELYQTKAADAKR------------------------------- 385

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                            +  L        + RGY  +Q   ++ +     +  K  + + 
Sbjct: 386 ----------------LSEALLMLDTSRIVARGYALVQ-AGDHVLDSVDTIKEKDALTLV 428

Query: 489 FFDGQANAIVINKAPPK 505
             DGQ    V +    +
Sbjct: 429 MRDGQVEVEVKHVERKE 445


>gi|325107441|ref|YP_004268509.1| exodeoxyribonuclease VII large subunit [Planctomyces brasiliensis
           DSM 5305]
 gi|324967709|gb|ADY58487.1| Exodeoxyribonuclease VII large subunit [Planctomyces brasiliensis
           DSM 5305]
          Length = 414

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 125/387 (32%), Positives = 211/387 (54%), Gaps = 10/387 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+  +K ++E+N   V  +GEIS       SGH YF+LKD  ++I A++WK   ++
Sbjct: 11  TVSELTRQIKDLLEANFDQVVCQGEISNLV-KARSGHVYFTLKDERAQISAVMWKTRASR 69

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F  ++G+E +V G +  +P    YQ+I+E  +P G G L  A  + ++KL  EGLF+ 
Sbjct: 70  LKFDLQDGLEVVVTGPVEVYPPRGSYQLIVEQAMPQGLGPLELAFRQLQEKLAAEGLFAP 129

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P  +A++TSPTGA +RD+LQ ++ R+PL  V++ PV VQG     +IA  +
Sbjct: 130 ERKRPLPRYPNRLALVTSPTGAAVRDMLQVLTRRWPLTDVVVVPVPVQGPTAAPKIAEGL 189

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            Q   +      P  D+I+  RGGGS+EDLW FN+E++ RAIA S IP++SA+GHE D +
Sbjct: 190 KQAARI------PGVDVILTGRGGGSLEDLWPFNEEIVARAIAASPIPVVSAVGHEIDVS 243

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLLK 312
           +AD  AD RA TP+ AAE+ VP +  +Q  L + + RL N++ +  +       L +  +
Sbjct: 244 IADLVADRRALTPSEAAEIIVPDRADIQRWLTDQKFRLENLLRQQSEQARRVLDLLAQRR 303

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 + L+  R R D L   +   ++  +    +    +  ++++   +  + +    
Sbjct: 304 IFQKPQELLTEPRRRCDDLEARMSQRMQRQLETSGQKLQSLTAQLEALSPLRVLARGYTM 363

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKI 399
             + +          +R     +    
Sbjct: 364 TQDAETGAVISRIDQVRPGQQMRTRLA 390



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 50/142 (35%), Gaps = 3/142 (2%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + +++  +E +++Q                  + ++ +  +         L  R+   + 
Sbjct: 274 LTDQKFRLENLLRQQSEQARRVLDLLAQR--RIFQKPQELLTEPRRRCDDLEARMSQRMQ 331

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFD 491
            ++++    +   T  L++ +    L RGYT  QD      I++   +    ++     D
Sbjct: 332 RQLETSGQKLQSLTAQLEALSPLRVLARGYTMTQDAETGAVISRIDQVRPGQQMRTRLAD 391

Query: 492 GQANAIVINKAPPKEQPTKKCQ 513
           G+  + +         P+   Q
Sbjct: 392 GEVISTIDAATETPSAPSDGKQ 413


>gi|293365586|ref|ZP_06612295.1| exodeoxyribonuclease VII [Streptococcus oralis ATCC 35037]
 gi|307703538|ref|ZP_07640480.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis ATCC
           35037]
 gi|291315954|gb|EFE56398.1| exodeoxyribonuclease VII [Streptococcus oralis ATCC 35037]
 gi|307622945|gb|EFO01940.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis ATCC
           35037]
          Length = 446

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +PIIS++G
Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TL D+ AD RA TPT AAE+A PV +  + + L N E R+   +  ++  K   L
Sbjct: 234 HETDVTLVDFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVQNVLSRKKEAL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               +       ++       RLD+L   L+ +L   I    +      +R+     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHRLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +     L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|260577256|ref|ZP_05845230.1| Exodeoxyribonuclease VII [Rhodobacter sp. SW2]
 gi|259020500|gb|EEW23822.1| Exodeoxyribonuclease VII [Rhodobacter sp. SW2]
          Length = 287

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 155/288 (53%), Positives = 200/288 (69%), Gaps = 1/288 (0%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+        + PEY+VSELS  +K ++E     V VRGE+ G     +SGH YF LKD+
Sbjct: 1   MDLIDDIPKGNAPEYTVSELSGAVKRVIEGEFGLVRVRGEV-GRVSRPASGHLYFDLKDD 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            S I AI WKG + K++  PEEG+E +  G +TTFPG SKYQ+I+  + P+G+G L+  L
Sbjct: 60  RSVIAAISWKGQVAKMQVRPEEGMEVVATGTMTTFPGQSKYQLIVSDVAPAGAGALMAML 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           EKR+  L  EGLF    K PIP++P +I V+TSP+GAVIRDIL R+  RFP  V+I+PV 
Sbjct: 120 EKRRLALAAEGLFDAAGKQPIPYLPGVIGVVTSPSGAVIRDILHRLRDRFPRHVLIWPVA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG  C  E+A AI   N +  G   PRPD+II+ARGGGS+EDLW FN+E++VRA A S 
Sbjct: 180 VQGQACAAEVAAAIRGFNAIVPGGAVPRPDLIIVARGGGSLEDLWGFNEEVVVRAAAASV 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           IP+ISA+GHETD TL D+AAD+RAPTPT AAEMAVPV+  L ++L  L
Sbjct: 240 IPLISAVGHETDTTLIDFAADVRAPTPTAAAEMAVPVRLELLAALDGL 287


>gi|291525243|emb|CBK90830.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale DSM
           17629]
 gi|291529298|emb|CBK94884.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale
           M104/1]
          Length = 406

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 116/365 (31%), Positives = 198/365 (54%), Gaps = 14/365 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +   YSV++++ ++K++   +     V ++GE+S  +  H+SGH YF++KD  + ++AI
Sbjct: 2   ANRNIYSVAQVNSYIKNMFAQDFMLRQVSIKGEVSNCK-YHTSGHIYFTIKDAGAAMNAI 60

Query: 68  IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++ G     + F  +EG + +V G +  +  +  YQ+  + +   G G L    E+ K++
Sbjct: 61  MFAGSRAAGLSFHMKEGDQVIVTGSVEVYEKTGAYQLYAKKIELDGEGNLYLKFEQLKRE 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L E G+F+ ++K PIP     I V+T+PTGA ++DI    S R P ++VI++P  VQG+ 
Sbjct: 121 LEEMGMFAAEYKQPIPQYAGRIGVVTAPTGAAVQDIRNVSSRRNPYVQVILYPALVQGEG 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I   I  L+ +         D+II+ RGGGSIEDLW FN+E++ RAI +   PIIS
Sbjct: 181 AADSIVKGIQTLDAM-------NLDVIIVGRGGGSIEDLWAFNEEIVARAIFDCRTPIIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETDWT+AD+ +D RAPTP+ AAE+AV         L NL  R++  +   I +   
Sbjct: 234 AVGHETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLRRRMDRNLTGRIDFFRE 293

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ +   L   +    L+ ++ RL  +   LE  ++  +    +    +   + +    
Sbjct: 294 KLSHIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPA 353

Query: 364 HNIQK 368
             + +
Sbjct: 354 KKLAQ 358



 Score = 96.4 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 57/142 (40%), Gaps = 2/142 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++  + +   ++ +++ +   + +   +       L+ L    +N++      +  +   
Sbjct: 267 RQTLERLDNLRRRMDRNLTGRIDFFREKLSHIKTRLNFL--SPQNKLNENKRRLADIEDA 324

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +E I+  ++  C   +++ +  L +++    L +GY  ++      +    ++     I 
Sbjct: 325 LERIMKQRLSDCRQRLALLSGTLDAYSPAKKLAQGYAYVEVEKKGALHSVSDINAGDDIN 384

Query: 487 INFFDGQANAIVINKAPPKEQP 508
           I   DG A A+V      +++ 
Sbjct: 385 IYLIDGHARAVVSEVINDEQRK 406


>gi|253681884|ref|ZP_04862681.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum D
           str. 1873]
 gi|253561596|gb|EES91048.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum D
           str. 1873]
          Length = 401

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 211/376 (56%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SVSEL+ ++K I++++    +  ++GEIS ++  H+SGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLSVSELNIYIKRIIDNDFILKNTKIKGEISNFKF-HNSGHVYFSLKDKQSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     + F+P+ G   ++ G+++ +     YQ   E +   G G L  A EK KKKL
Sbjct: 60  MFRSYTENLNFIPQNGDNVIIKGRVSVYQKDGLYQFYCEEIEKEGIGDLFIAFEKLKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF ++HK  IP   K I VITS TGA I+DI+     R   + ++I+P  VQG+  
Sbjct: 120 YEEGLFDEEHKKRIPLYSKKIGVITSATGAAIKDIINVSKRRNKGIEILIYPSLVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  L++          D+II+ARGGGSIE+LW FN+E +   I   S PIIS 
Sbjct: 180 SENLMQGIKYLDSR------DDVDLIIIARGGGSIEELWAFNNEALAYEIYKCSTPIISG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D+RAPTP+ AAE+AV   E +  ++ N + +L N+I  +I  K+  
Sbjct: 234 VGHETDFTICDFVSDMRAPTPSAAAELAVCSLEEINGNIENYKEKLYNLIKHIINLKLKQ 293

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LNS      L N   T+     ++D +  +L H ++  I       + + + + +   ++
Sbjct: 294 LNSCENAIKLNNPLNTIVNEYIKIDNIKNKLYHEIQSKIEYDKIKLSKVNSLLNAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            + K    I ++  +I
Sbjct: 354 ILSKGFSIIQDEMNNI 369



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 2/136 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++   +I   ++ +  ++K  +      K+       +      N I   +  I  +  
Sbjct: 265 LEEINGNIENYKEKLYNLIKHIINLKL--KQLNSCENAIKLNNPLNTIVNEYIKIDNIKN 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++   +  KI+     +S    +L +    N L +G++ IQD  NN I+ K N+     I
Sbjct: 323 KLYHEIQSKIEYDKIKLSKVNSLLNAHNPLNILSKGFSIIQDEMNNIISNKDNIKKDDSI 382

Query: 486 LINFFDGQANAIVINK 501
            I F DG+    +   
Sbjct: 383 KITFKDGETKVKIKEV 398


>gi|331084733|ref|ZP_08333821.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410827|gb|EGG90249.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 410

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 194/360 (53%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++   +     + V+GE+S  +  H+SGH YFSLKD    I  +++ G
Sbjct: 4   VYSVGQVNSYIKNMFTQDFMLGRIYVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F   EG + +V+G +  +    +YQ+  + +I  G+G L    EK K++L E G
Sbjct: 63  QRGGLAFRMREGQQVIVLGSVNVYERDGRYQLYAKEIILDGAGLLYEKFEKLKQELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F  ++K PIP     + ++T+PTGA IRDI+   S R P +++ + P  VQG++  + I
Sbjct: 123 MFEQEYKRPIPPFASTVGIVTAPTGAAIRDIIHIASRRNPYVQLYLCPALVQGEDAAESI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+ I +L+           D+II+ RGGGSIEDLW FN+E++ RAI     P+ISA+GHE
Sbjct: 183 ADGIRRLDAF-------GVDVIIVGRGGGSIEDLWAFNEEIVARAIFACQTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV   + ++  L   E +L   +  +++   N +   
Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYDVVRVYLDETERKLKRALSHVVEEMRNQVMQR 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + L   +    L+  R +   L       ++  +       +    R+     +  + +
Sbjct: 296 AQRLSYLHPQVKLNEKRQQAVDLEERFRQKMQERLKEAKHGLSVRAERLNGLSPVRKLGQ 355



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 2/146 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R ++ E ++ +++ +   +  +  +  ++   L  L    + ++         L  R   
Sbjct: 267 RVYLDETERKLKRALSHVVEEMRNQVMQRAQRLSYL--HPQVKLNEKRQQAVDLEERFRQ 324

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  ++K     +S+    L   +    L +G++ +Q+     I +  ++     + I  
Sbjct: 325 KMQERLKEAKHGLSVRAERLNGLSPVRKLGQGFSYVQNEIGVNIRKIEDVCPGELLSIKV 384

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515
            DG  +A V       E   K  Q  
Sbjct: 385 TDGTIHAQVTEVEKEAEDGGKHSQRE 410


>gi|315613299|ref|ZP_07888208.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           ATCC 49296]
 gi|322375373|ref|ZP_08049886.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C300]
 gi|315314534|gb|EFU62577.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           ATCC 49296]
 gi|321279636|gb|EFX56676.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C300]
          Length = 446

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 236/500 (47%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  + + L N E R+   +  ++  K   L
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVQNVLSRKKEAL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               +       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +     L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLNKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|168186198|ref|ZP_02620833.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum C
           str. Eklund]
 gi|169295779|gb|EDS77912.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum C
           str. Eklund]
          Length = 400

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 129/375 (34%), Positives = 213/375 (56%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SVSEL+ ++K++++++    +  ++GEIS ++ IH SGH YFSLKD +S+I+ I
Sbjct: 1   MQMKTLSVSELNNYIKNVIDNDFILKNSKIKGEISNFK-IHVSGHIYFSLKDKNSKINCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     ++F+PE+G   ++ G+++ +     YQ   E +   G G L  A E  KKKL
Sbjct: 60  MFRSYARNLKFIPEDGDNVILKGRVSVYQKDGAYQFYCEDIEKEGVGDLFIAFEALKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             EGLF + +K  IP   K I VITSPTGA ++DI+     R   + ++I+P  VQG+  
Sbjct: 120 YNEGLFDEYNKKEIPRFAKKIGVITSPTGAAVKDIINVSKRRNKGVELLIYPALVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           PK++ N I   +           D II+ARGGGSIE+LW FN+E +  AI N + P+IS 
Sbjct: 180 PKDLINGINYFSNR------DDIDTIIIARGGGSIEELWAFNNEDLAYAIYNCNKPVISG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+ V     + +++ N + RL N+I   I  K   
Sbjct: 234 VGHETDFTICDFVSDRRAPTPSAAAEIGVFNLNEVNANIENYKNRLYNLIRNTINLKFKE 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LNSL   +   +   T++    ++D L  +L H +E  I  +    +   + + +   ++
Sbjct: 294 LNSLESTIKINSPMNTVANEYIKIDNLKNKLCHKIESKIEYEKIKLSKANSLLNAHNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + K    I +++ +
Sbjct: 354 ILSKGFSIIKDEKNN 368



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 2/137 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+ +   +I   +  +  +++  +   F  K+       +      N +   +  I  L 
Sbjct: 264 NLNEVNANIENYKNRLYNLIRNTINLKF--KELNSLESTIKINSPMNTVANEYIKIDNLK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            ++   +  KI+     +S    +L +    N L +G++ I+D  NN IT K  +     
Sbjct: 322 NKLCHKIESKIEYEKIKLSKANSLLNAHNPLNILSKGFSIIKDEKNNVITTKEKIEKDKC 381

Query: 485 ILINFFDGQANAIVINK 501
           I I F DG     + + 
Sbjct: 382 INITFKDGSTKVRISDV 398


>gi|310829049|ref|YP_003961406.1| exodeoxyribonuclease VII [Eubacterium limosum KIST612]
 gi|308740783|gb|ADO38443.1| exodeoxyribonuclease VII [Eubacterium limosum KIST612]
          Length = 406

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 126/359 (35%), Positives = 201/359 (55%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+E+++ +K +++ N  L ++ V GEIS  +  HSSGH YFSLKD+ SRI  ++++  
Sbjct: 6   LSVTEVNHFIKTMLDGNSVLKNLMVEGEISNLKF-HSSGHVYFSLKDSQSRIACVMFRNH 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           +  ++F PEEG++  + G I+ F  + +YQI + S+ P G G L  A E+ K+K    G 
Sbjct: 65  VQNLKFRPEEGMKITIKGGISVFERNGQYQIYVRSMEPQGVGALYKAFEQLKEKYQALGW 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
              + K P+P   + + ++TSPTGA IRD++  I  R P + ++I+   VQGD   +EIA
Sbjct: 125 LDTEQKKPLPEYIRRVGIVTSPTGAAIRDMISVIRRRNPQIHIVIYGALVQGDGAAEEIA 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N L         D+II+ RGGGS+EDLW FN+E++  AI  S +P+ISA+GHET
Sbjct: 185 RGIETFNRL------GNADVIIIGRGGGSMEDLWAFNEEIVGEAIHASQLPVISAVGHET 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ AD+RAPTP+ A E+          +L  L++RL   + R I+     L    
Sbjct: 239 DFTIADFVADMRAPTPSVAGELVAENLLEWAGTLTQLKSRLLKAMNRHIEKNRMALTQAA 298

Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L     +  ++  R  LD L   +   +   I R+      +  R+ +   +  +++
Sbjct: 299 ARLLRSGPENQVADMRLYLDALQDRMLRGMRFEIERQRSRVESVSRRLDALNPLGVLKR 357



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 56/140 (40%), Gaps = 2/140 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+ +    + + +  + + + +H+    +   +  A L  LR   +N++  +  ++  L 
Sbjct: 264 NLLEWAGTLTQLKSRLLKAMNRHIEKNRMALTQAAARL--LRSGPENQVADMRLYLDALQ 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   +  +I+   + V   +R L +      LKRGY   +D +   +           
Sbjct: 322 DRMLRGMRFEIERQRSRVESVSRRLDALNPLGVLKRGYVLAEDKSGGLVRSAAEAEAAGT 381

Query: 485 ILINFFDGQANAIVINKAPP 504
           + + F DG+    VI +   
Sbjct: 382 MKLKFHDGEVIVSVIKEGAE 401


>gi|262282722|ref|ZP_06060490.1| exodeoxyribonuclease VII large subunit [Streptococcus sp.
           2_1_36FAA]
 gi|262262013|gb|EEY80711.1| exodeoxyribonuclease VII large subunit [Streptococcus sp.
           2_1_36FAA]
          Length = 446

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 155/500 (31%), Positives = 236/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y II+E   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIILEKAEPDGIGVLAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQTLPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QIADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   + R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQKNRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++  ++ ++ +   +         + +                             
Sbjct: 354 VQRLQEQTVQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   I     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESTIGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|152990176|ref|YP_001355898.1| exodeoxyribonuclease VII large subunit [Nitratiruptor sp. SB155-2]
 gi|166232358|sp|A6Q232|EX7L_NITSB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|151422037|dbj|BAF69541.1| exodeoxyribonuclease VII, large subunit [Nitratiruptor sp. SB155-2]
          Length = 416

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 122/370 (32%), Positives = 202/370 (54%), Gaps = 12/370 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+VS+L+  +K+++ES+   V V GE+S     H+SGH YFSLKD  S I  ++++  L
Sbjct: 3   VYTVSQLNEQIKNLLESHFVEVYVEGEVS-RPTYHTSGHLYFSLKDEKSVIRCVMFRSAL 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K+ F  E+G + +V GKI  +    +YQ+    L PSG G+L  A E+ K KL ++G F
Sbjct: 62  AKVPFRVEDGQKLIVAGKIGVYKPRGEYQLYATELHPSGVGSLQLAFEQLKAKLEKKGYF 121

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + + K P+P   + IA++TS TGA ++D+L+ I  R+P ++V +    VQG +    IA 
Sbjct: 122 ASELKKPLPDFIQTIALVTSQTGAALQDMLRIIQNRWPLVKVYVVDTLVQGSDAAPMIAR 181

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   + L         D+I++ RGGGS+EDLW FN+E++  AI  +  PI+SA+GHE D
Sbjct: 182 SIAYADGL-------GVDVIVVGRGGGSLEDLWPFNEEIVADAIFEAKTPIVSAVGHEID 234

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + ++D+ ADLRAPTP+ A EM +P ++ +   L  L  RL   +  +++ K   L  L  
Sbjct: 235 FLISDFVADLRAPTPSAAMEMILPDRQEMLMHLDLLMQRLTKRMQTILQLKTQELGHLQN 294

Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +L      + L      +  +   +   +  I+        H+   +    +    ++ +
Sbjct: 295 SLFQLSPQKRLEFYEKEITIMNERMNETITAILKNSSHEIPHLKA-LFDQKIEWIWKQKK 353

Query: 371 QHILEKQQHI 380
           Q +   QQ +
Sbjct: 354 QDLTSLQQKL 363



 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
           H+  L+ R+   +   ++     +      L   + +  L+
Sbjct: 266 HLDLLMQRLTKRMQTILQLKTQELGHLQNSLFQLSPQKRLE 306


>gi|224543280|ref|ZP_03683819.1| hypothetical protein CATMIT_02480 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523813|gb|EEF92918.1| hypothetical protein CATMIT_02480 [Catenibacterium mitsuokai DSM
           15897]
          Length = 440

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 131/495 (26%), Positives = 228/495 (46%), Gaps = 60/495 (12%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65
           ++    SV  L+ ++K  ++++  L  V +RGEIS YR    SGH YF+LKD+   S I 
Sbjct: 1   MERQYVSVHALNRYIKAKLDNDMQLQTVYIRGEISNYRPHP-SGHMYFTLKDDQTESSIS 59

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
           AI++      ++F  ++G++  +  +++ F  + +YQ+ + S+   G G L     + K+
Sbjct: 60  AIMFASQARYLKFRLKDGMKVFITAQVSVFERAGRYQLYVRSMQEDGLGNLYLRFNELKQ 119

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+  HK  IP +P+ +A++++  GA ++D+L+ +  R+P +   I+PV VQG 
Sbjct: 120 ALEREGLFNAIHKKEIPSMPERLAILSAKQGAALQDVLRTLHQRYPLVARDIYPVPVQGR 179

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +  + I + + +++ +           I+L RGGGSIEDLW+FN+E + R I +   PII
Sbjct: 180 DAYQVIVDTLKKVDEM-------GYSTILLVRGGGSIEDLWNFNEEALARCIYDLKTPII 232

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           + +GHETD+TL DY +DLRAPTPT AA  AVP ++ L + L N   RL++++ + I  + 
Sbjct: 233 TGVGHETDYTLVDYVSDLRAPTPTAAAVAAVPSQKDLLNHLENKIVRLSSVMRKTIYLER 292

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                                                             +         
Sbjct: 293 QK-------------------------------------------LEKYQHSYVFTDPSR 309

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             +     +   Q  +       +R     + E    L  L    K +       I    
Sbjct: 310 IFETKFMKLDNIQLKLNN---FKIRIKQQSRYEMHKKLIQLNTLIKQKQLIERKSISNNQ 366

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +E    + +K+  TS   +   L   +   T++RGY  I   +++ I   + L+    
Sbjct: 367 ELLESQFINYLKNKKTSFIYSVEKLDLLSPLKTMQRGY-IISKKDDHIIKSVKELSHNET 425

Query: 485 ILINFFDGQANAIVI 499
           + + + DG+  AIV 
Sbjct: 426 VTLVYVDGEKEAIVK 440


>gi|255658169|ref|ZP_05403578.1| exodeoxyribonuclease VII, large subunit [Mitsuokella multacida DSM
           20544]
 gi|260849477|gb|EEX69484.1| exodeoxyribonuclease VII, large subunit [Mitsuokella multacida DSM
           20544]
          Length = 402

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 133/358 (37%), Positives = 206/358 (57%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVSE++  +K +   E  L  + VRGE+S +R   +SGH YF+LKD +S I  ++++   
Sbjct: 5   SVSEVTNFIKRMFQREPVLGCIQVRGELSNFRCY-ASGHCYFTLKDANSCIKCVMFRSRA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +V G I+ +     YQ+  + ++P G+G L  A E+ K +L  EGLF
Sbjct: 64  QGLRFRPENGMQVVVSGNISVYERDGVYQLYADRMMPEGAGDLALAFEQLKARLAAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK P+P  PK I ++TS +GAV+RDI      R+P +++++ PV VQG+E   +IA 
Sbjct: 124 DAAHKKPLPRFPKRIGIVTSISGAVLRDIYHVSKRRWPSVQLVLKPVLVQGEEAAAQIAA 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS+EDLW FN+E +VRAI  S IP+ISA+GHETD
Sbjct: 184 AIAFFNEKYP------VDVLIVGRGGGSMEDLWAFNEEPVVRAIYASKIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +TLAD+A+D RA TP+ AAE+AVP +  L     +L ARL     R ++ K   L++  +
Sbjct: 238 FTLADFASDQRAATPSQAAELAVPDRAELLRYTESLMARLAQQGKRQLQEKRLRLDACRR 297

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +  L      L+    RLD     L+  ++  +  K       + ++     +H +++
Sbjct: 298 SAALQKPQLLLASRTQRLDHATARLDALMKSQMKEKRHALEIALQQLDYLNPVHILRQ 355



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 56/141 (39%), Gaps = 3/141 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIA--ILHMLREQTKNRIFYLHTHIKKLITRI 427
           R  +L   + +   + Q  +    EK+ ++         ++ +  +      +     R+
Sbjct: 263 RAELLRYTESLMARLAQQGKRQLQEKRLRLDACRRSAALQKPQLLLASRTQRLDHATARL 322

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           + ++  ++K    ++ I  + L      + L++GY  ++    + +T  R+     R+ I
Sbjct: 323 DALMKSQMKEKRHALEIALQQLDYLNPVHILRQGYGIVEKA-GSAVTSVRDARPGDRLTI 381

Query: 488 NFFDGQANAIVINKAPPKEQP 508
              DG+  A V + A  + + 
Sbjct: 382 TLKDGRLAARVESAAGTEGRA 402


>gi|306825092|ref|ZP_07458434.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432528|gb|EFM35502.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 446

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 235/500 (47%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P +VQGD   +
Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTRVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +PIIS++G
Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  + + L N E R+   +  ++  K   L
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVQNVLSRKKEAL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               +       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSNQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++      +     L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAILKKEE-TVVDSVEKLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|238926869|ref|ZP_04658629.1| exodeoxyribonuclease VII [Selenomonas flueggei ATCC 43531]
 gi|238885401|gb|EEQ49039.1| exodeoxyribonuclease VII [Selenomonas flueggei ATCC 43531]
          Length = 416

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 129/356 (36%), Positives = 201/356 (56%), Gaps = 12/356 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+++ ++K + E    LS + +RGE+S Y+    SGHAYF+LKD  + +  +++ G  
Sbjct: 19  SVSDVTRYIKGMFEHEPILSDLLIRGEVSNYKRYP-SGHAYFTLKDAGASMKCVMFNGYA 77

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +  G I+ +     YQ+ + SL P G+G L  A E+ + +L  EGLF
Sbjct: 78  RNLRFAPENGMQVIAGGNISVYERDGAYQLYVSSLTPEGAGALALAFEQMRDRLAAEGLF 137

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            + HK P+P  P+ I ++TS  GAV+RDI      R+P +++I+ PV VQG    ++IA+
Sbjct: 138 DEGHKQPLPRFPRRIGIVTSSAGAVLRDIHNVSKRRWPGVQLILHPVLVQGAGAAEQIAD 197

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+   N           D++I+ RGGGS EDLW FN+E++VRA+  S IP+ISA+GHETD
Sbjct: 198 AVAFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEVVVRAVYRSRIPVISAVGHETD 251

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL D+ +D RA TP+ AAE AVP    ++  L+ L ARL+    R I +    L++L++
Sbjct: 252 TTLVDFVSDRRAATPSQAAEFAVPDVVEIERFLMGLRARLDAGRKRQIDHAGTRLSTLVQ 311

Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                N    L+    R DR   EL H  +            ++ R++    +  +
Sbjct: 312 RPWCANPRMLLAPLMQRSDRAAAELHHAAKEQSVAARHRLELVLKRLELLNPVRVL 367



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + ++  +  ++   K+ + +        +          +  +  L     +    +   
Sbjct: 282 RFLMGLRARLDAGRKRQIDHAGTRLSTLVQR--PWCANPRMLLAPLMQRSDRAAAELHHA 339

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              +  +    + +  + L+       L RG++ ++  +   +++ +++    R+ I F 
Sbjct: 340 AKEQSVAARHRLELVLKRLELLNPVRVLCRGFSIVE-KDGRAVSRVKDVTAGDRVNITFA 398

Query: 491 DGQANAIVIN 500
           DG+ +A+V  
Sbjct: 399 DGKISAVVEQ 408


>gi|294506729|ref|YP_003570787.1| exodeoxyribonuclease VII large subunit [Salinibacter ruber M8]
 gi|294343057|emb|CBH23835.1| Probable exodeoxyribonuclease VII large subunit [Salinibacter ruber
           M8]
          Length = 436

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 3/283 (1%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
              N+ D P  SV+EL+  L  +VE     V V GE+S +    +SGH YFSLKD  ++I
Sbjct: 3   PTNNTADDPVLSVAELTRGLSDLVEDRYDDVWVEGELSDFT-RAASGHCYFSLKDEDAQI 61

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
             ++WK     + F PEEG++  V G  + +      QI  +++  +G G    A E+ K
Sbjct: 62  RCVMWKHLTKYVYFEPEEGMQVRVNGHASVYERRGDLQIQAQAMRQAGKGAQQKAFEELK 121

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQG 183
           + L  EGLF+ + K  +P  P  I V+TS  GA I DI   ++ RF P  V++ PVKVQG
Sbjct: 122 QTLQAEGLFAPERKQALPAFPDTIGVVTSGQGAAIHDIQSGLARRFPPAEVVLCPVKVQG 181

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
            + P+ +A+A+   N L       RPD++I+ RGGGS EDLW FN+E++ RA+  S++P+
Sbjct: 182 LDAPRAVADAVAAFNDLPADDAQ-RPDLLIVGRGGGSTEDLWAFNEEVVARALDASNLPV 240

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           +SA+GHE+D T+AD  AD RA TP+ AAE  VP +  + ++  
Sbjct: 241 VSAVGHESDVTIADLVADERAATPSAAAERVVPDRRDVATACA 283


>gi|262038470|ref|ZP_06011844.1| exodeoxyribonuclease VII, large subunit [Leptotrichia goodfellowii
           F0264]
 gi|261747565|gb|EEY35030.1| exodeoxyribonuclease VII, large subunit [Leptotrichia goodfellowii
           F0264]
          Length = 446

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 135/496 (27%), Positives = 231/496 (46%), Gaps = 56/496 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   +SVSE++  +K  +E      ++ ++GE+S     + SGH YF+LKD+ + +   
Sbjct: 1   MEQTVFSVSEVNRAVKQFLEGTSTFKNILIQGELSNIT-YYRSGHLYFTLKDDKASVKCA 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-SGSGTLLTALEKRKKK 126
           I+K     I    +EG +  + G  T +  S  +QII E+L      G+L   LE+ KK 
Sbjct: 60  IFKYIYKNIPTDLKEGDQVKITGSATIYEASGSFQIIAEALEKTDKLGSLYEKLERLKKL 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
            LE+G F + +K P+P +P  I V+T+ TGA IRDI+     RF  + + ++P KVQG+ 
Sbjct: 120 YLEKGYFDESNKKPLPLLPVNIGVVTAETGAAIRDIINTAHKRFRNINIYLYPAKVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E++  I   N +K+       D++I+ RGGGSIEDLW FN+E ++ A+ +S IP+IS
Sbjct: 180 SAAEVSAGIEFFNKMKKE-EQLDTDVLIVGRGGGSIEDLWSFNEEAVIEAVFHSEIPVIS 238

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D  L+D  AD RA TPT AAE+ +PVKE L  +L   +  +N +++  +     
Sbjct: 239 AVGHEIDNLLSDLVADKRAATPTQAAEILIPVKEELIRNLEIRKNNVNKLLLNKVTLMKK 298

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L        + N    L+  + +L    + +   L+ I+ R    F++   + +   L 
Sbjct: 299 ELEQRKNNYYIKNYVGILNDKKLQLMEKEQRITRELKRIVERAREQFDYRKKKFEKTDLK 358

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +   +  +   ++ +   + + LR +  + + K                         
Sbjct: 359 MILNDKKDKLNTFEKKLNNKISEILRELKKDLEYKT------------------------ 394

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                                    L  ++  + LK+GYT  +  N   + +   L+   
Sbjct: 395 -----------------------AKLSKYSINDILKQGYTITR-KNGKVVKRGIELSKSD 430

Query: 484 RILINFFDGQANAIVI 499
            I I F D +  + V 
Sbjct: 431 NIEIQFSDMKVKSTVK 446


>gi|77409333|ref|ZP_00786036.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           COH1]
 gi|77172065|gb|EAO75231.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           COH1]
 gi|319744562|gb|EFV96915.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae
           ATCC 13813]
          Length = 446

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 143/493 (29%), Positives = 228/493 (46%), Gaps = 62/493 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +P   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLLPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   N           D++I+ RGGGSIEDLW FN+E +V AI  S +P+IS++GHET
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A  V +  + S +   E R+    +RLI+ K   L   
Sbjct: 237 DTTLADFVADRRAATPTAAAELATTVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +       ++       +LD L ++L +++   +    +    +  +++   L   +  
Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRLHT 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            ++ +++ ++ +   +                                            
Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                               L S      + RGY  I+  N+  ++    +     + + 
Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428

Query: 489 FFDGQANAIVINK 501
             DG     V + 
Sbjct: 429 MQDGLLEVEVKDV 441


>gi|313681594|ref|YP_004059332.1| exodeoxyribonuclease vii large subunit [Sulfuricurvum kujiense DSM
           16994]
 gi|313154454|gb|ADR33132.1| Exodeoxyribonuclease VII large subunit [Sulfuricurvum kujiense DSM
           16994]
          Length = 420

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 125/489 (25%), Positives = 213/489 (43%), Gaps = 81/489 (16%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS L+  +K ++E++   V V GE+S     H SGH YF+LKDN S I  +++KG  +
Sbjct: 5   LSVSSLNEQIKTLLETSFEFVSVEGELS-RVTKHGSGHIYFTLKDNESAIKCVMFKGNAS 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +++F  EEG   ++ G ++ +    +YQI   S  P G+G L  A E+ K+KL  +G F 
Sbjct: 64  RLKFSLEEGAHVILHGALSLYKPRGEYQINAFSAEPYGAGALAVAFEQLKQKLEAKGYFD 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K P P  P+ + ++TS TGA ++D+ +  + R+P +++I+  V VQG     +IA+A
Sbjct: 124 PTRKKPFPKFPQTVVLVTSATGAALQDMQRVATQRWPLVKLIVLDVLVQGPSASGQIADA 183

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +TL         D +++ RGGGSIEDLW FN+E++  A+     P ISA+GHE DW
Sbjct: 184 LRTADTLHA-------DAVVVGRGGGSIEDLWAFNEEIVADALYAMKTPTISAVGHEIDW 236

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++DY AD+RAPTP+ A +M +P +                                   
Sbjct: 237 VISDYVADMRAPTPSAAMQMLLPDQ----------------------------------- 261

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                   +     +D +       +   + RK      +    K   + H ++  ++ I
Sbjct: 262 --------NELSQSIDEIRYGAYGMITQRLERKREQLLSMQEAFKRHGVEHRLEVQQELI 313

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E ++ + + +                           R+      I  L+ R+   +  
Sbjct: 314 KELRERLNRQMT-------------------------QRLEQSRREIIPLMERLSQNIES 348

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            ++     ++  +    +   KN  K G+  I       I     L+   R      D +
Sbjct: 349 ILRQKQFMITQLSEGFNANHPKNKNKSGFAQIARE-GKVI-DLDALSVGDRFEA-MNDKR 405

Query: 494 -ANAIVINK 501
              A V+  
Sbjct: 406 VVRAEVVEI 414


>gi|323693776|ref|ZP_08107971.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum
           WAL-14673]
 gi|323502162|gb|EGB18029.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum
           WAL-14673]
          Length = 404

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 120/360 (33%), Positives = 191/360 (53%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K++   +   S + V+GE+S  +  HSSGH YF+LKD    I A+++ G
Sbjct: 7   VYSVSQVNAYIKNMFAQDFALSRISVKGEVSNCK-YHSSGHIYFTLKDGLGAIQAVMFAG 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F+ EEG + +V G +  +    +YQ+    +   G+G L    EK + +L E G
Sbjct: 66  KRRGLNFVLEEGQQVVVKGSVEVYERDGRYQLYAAEITLDGTGDLFKRFEKLRNELEEMG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+ ++K+PIP     + ++T+ TGA IRDI+     R P +++++ P +VQG+     I
Sbjct: 126 MFAPEYKSPIPKYAMKVGIVTASTGAAIRDIINIARRRNPYVQLVLCPAQVQGEGAASSI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A  I  L+ +         D++I+ RGGGSIEDLW FN+E + RAI     P+ISA+GHE
Sbjct: 186 ARGIETLDAM-------GLDVLIVGRGGGSIEDLWAFNEETVARAIFACKTPVISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV      +  L     +L   +    +     L   
Sbjct: 239 TDVTIADYVADLRAPTPSAAAELAVFDYALFEGQLREAGQKLYRALSGRKEMAAYRLEQY 298

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   N ++ L+  R RL      +E  L+  +  +      +  R+     +  I K
Sbjct: 299 RLRLRLYNPERQLNEKRQRLADAEERMERLLKQKLTDRKHRLALLSGRLHGLSPLEKISK 358



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 2/134 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E  Q + + +    R      + +   L +     + ++      +     R+E +L
Sbjct: 272 QLREAGQKLYRALSG--RKEMAAYRLEQYRLRLRLYNPERQLNEKRQRLADAEERMERLL 329

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K+      +++ +  L   +    + +G+  +   +   +    ++     +LI   D
Sbjct: 330 KQKLTDRKHRLALLSGRLHGLSPLEKISKGFGFLTGEDGKRVESAESVKAGDHLLIRVLD 389

Query: 492 GQANAIVINKAPPK 505
           G+  A V+      
Sbjct: 390 GRIEAEVVKAEKSG 403


>gi|300854299|ref|YP_003779283.1| exodeoxyribonuclease VII large subunit [Clostridium ljungdahlii DSM
           13528]
 gi|300434414|gb|ADK14181.1| exodeoxyribonuclease VII large subunit [Clostridium ljungdahlii DSM
           13528]
          Length = 398

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 124/370 (33%), Positives = 206/370 (55%), Gaps = 12/370 (3%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS+++ ++K  ++++   ++  ++GE+S  + +H+SGH YFSLKD  S+I+ I++K  
Sbjct: 6   LTVSDINNYIKKTLDNDFILANCSIKGEVSNLK-LHTSGHIYFSLKDKFSKINCIMFKSD 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F+PE+G++ +V G+++ +     YQ+    + P G G L  A EK K KL ++GL
Sbjct: 65  AQNLNFIPEDGMKVIVKGRVSLYEKEGLYQLYCNEMKPDGMGELYLAFEKLKVKLEQKGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191
           F + HK  IP   K I VITS TGA ++DI+     R   + ++I+P  VQG     ++ 
Sbjct: 125 FDESHKRKIPTYAKKIGVITSSTGAALKDIINVTKRRNKKVELLIYPSLVQGANASSDVI 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I  LN++++       ++II+ARGGGSIE+LW FNDE +  AI +S  PII+ +GHE 
Sbjct: 185 KGIEVLNSIED------VELIIIARGGGSIEELWCFNDEKLAEAIYSSKKPIITGVGHEI 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ D+ +D RAPTP+ AAE+AV   E     L + + RL       IK + N LN L 
Sbjct: 239 DYTIVDFVSDRRAPTPSAAAEIAVFNLEEALQKLNSYKNRLYTYAKDKIKDEKNRLNFLK 298

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           K   L +    ++     +D+L   L   L + I  K      I   + +   ++ + + 
Sbjct: 299 KTLDLNSPLIYIANQYSNVDKLKELLNFKLNVKINEKKEKLAKINALLSAHNPLNILNRG 358

Query: 370 RQHILEKQQH 379
              I + + +
Sbjct: 359 YSIIEDDENN 368



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 2/129 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+++  Q +   +  +        +    + +       +        I   ++++ KL 
Sbjct: 264 NLEEALQKLNSYKNRLY--TYAKDKIKDEKNRLNFLKKTLDLNSPLIYIANQYSNVDKLK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             + F L+ KI      ++    +L +    N L RGY+ I+D  NN I+    L  K +
Sbjct: 322 ELLNFKLNVKINEKKEKLAKINALLSAHNPLNILNRGYSIIEDDENNGISSIEELNKKDK 381

Query: 485 ILINFFDGQ 493
           I +   DG 
Sbjct: 382 IKVIMKDGT 390


>gi|187736206|ref|YP_001878318.1| exodeoxyribonuclease VII, large subunit [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187426258|gb|ACD05537.1| exodeoxyribonuclease VII, large subunit [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 454

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 139/493 (28%), Positives = 224/493 (45%), Gaps = 53/493 (10%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
            F ++        +V +L Y L+  V   +    V GE+S  +  H+SGH YF+LK+  +
Sbjct: 2   EFPEETPAAPKPITVKQLVYRLRDTVSIAMGTQWVVGELSNVKH-HTSGHVYFTLKEQGA 60

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I    +K   +K     +EG++  V+G  T +P   + Q++I  +  +G G L T   +
Sbjct: 61  EIFCAFFKAAASKCPIRLQEGMKVHVLGSATVYPDRGQLQLVIRQVKAAGQGDLQTRFLE 120

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K KL  EGLF  +HK  IP  P+ I ++TSPTGAVI+D+   +  R P ++  + P++V
Sbjct: 121 LKAKLQREGLFDAEHKKKIPTFPRAIGIVTSPTGAVIQDMRHVLERRAPWVKAYLLPIRV 180

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     EIA A+   +        P  D++I+ RGGGSIEDLW+FN+E + RAI   ++
Sbjct: 181 QGAGAEHEIAAAVRAWSGA-PFNGLPPVDVLIVGRGGGSIEDLWNFNEETVARAIYECTV 239

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GH+TD+T+AD+ ADLRAPTPT AAE+A P        L  +E  L+      + 
Sbjct: 240 PVISAVGHDTDFTIADFVADLRAPTPTAAAELATPDGPEWLRKLSRMEQALHASARHSLL 299

Query: 302 YKINTLNSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                L+  L+  L ++   LS    RLD +   L++     IF    H N + ++++  
Sbjct: 300 RSKLKLDVYLRGKLLDAYSLLSPYSQRLDDMEETLQNAATTRIFHNALHINKLEHQLQMR 359

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
              H  ++  Q +   Q  +                               R+  L + +
Sbjct: 360 HPAHRNRERTQLLASLQAGLSHA-------------------------AAARMTDLSSQL 394

Query: 421 KKLITRIE-FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
             +  R+E       ++  +  V    + L                       I Q   +
Sbjct: 395 TLIQARLEAHSPEQTLRRGYALVENQDKQL-----------------------IRQTNQV 431

Query: 480 ATKTRILINFFDG 492
               ++ I   DG
Sbjct: 432 HAGEKLKIRVSDG 444


>gi|134045887|ref|YP_001097373.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis
           C5]
 gi|132663512|gb|ABO35158.1| Exodeoxyribonuclease VII large subunit [Methanococcus maripaludis
           C5]
          Length = 407

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 131/377 (34%), Positives = 209/377 (55%), Gaps = 12/377 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +VSEL+ ++K  +E +  L    ++GEIS    +H SGH YF+LKD +S ID 
Sbjct: 8   SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSSIDC 66

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++K     + F P EG+  ++ GK++ +  + KYQ    S+   G G L    EK K+K
Sbjct: 67  VMFKPYAKNLNFSPTEGMGVILKGKVSLYAKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L  EGLFS+++K  IP  PK I +ITSPTGA I+DI++    R   + +II P  VQG+ 
Sbjct: 127 LENEGLFSEKYKQKIPKYPKNIGIITSPTGAAIKDIIKVARNRNSSVNLIIHPAVVQGES 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K +   + +LN L       + D+II+ARGGGS+EDLW FNDE + RAI  S  P+++
Sbjct: 187 AAKTVIAGLSELNKL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T++D+ +DLRA TP+ AAE+ V  +  L+S + N E  L + I   I  +  
Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYNEHELKSIIDNFERILKHRIKIEIANRSY 300

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L   +   +    +   +  +DR+   + H ++  I  + + F    + + +   +
Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLHIDRIMTLMNHEIKNRISYELKRFEKSYSLLNAYNPL 360

Query: 364 HNIQKNRQHILEKQQHI 380
           + + K    I ++ + I
Sbjct: 361 NVLNKGYSIIQDENEKI 377



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426
           N   +     + E+I+K  ++     +  ++ IL+  + +   K++I     HI +++T 
Sbjct: 272 NEHELKSIIDNFERILKHRIKIEIANRSYELDILYSKIEKNSPKSKIEKQKLHIDRIMTL 331

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + ++I         +  +L ++   N L +GY+ IQD N   I+ K  L T+  + 
Sbjct: 332 MNHEIKNRISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKNLLKTENDVK 391

Query: 487 INFFDGQANAIVI 499
           I   DG  +A + 
Sbjct: 392 ITLKDGTVDAHIT 404


>gi|325661674|ref|ZP_08150297.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471927|gb|EGC75142.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 410

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 194/360 (53%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++   +     + V+GE+S  +  H+SGH YFSLKD    I  +++ G
Sbjct: 4   VYSVGQVNSYIKNMFTQDFMLGRIYVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F   EG + +V+G +  +    +YQ+  + +I  G+G L    EK K++L E G
Sbjct: 63  QRGGLAFRMREGQQVIVLGSVNVYERDGRYQLYAKEVILDGAGLLYEKFEKLKQELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F  ++K PIP     + ++T+PTGA IRDI+   S R P +++ + P  VQG++  + I
Sbjct: 123 MFEQEYKRPIPPFASTVGIVTAPTGAAIRDIIHIASRRNPYVQLYLCPALVQGEDAAESI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+ I +++           D+II+ RGGGSIEDLW FN+E++ RAI     P+ISA+GHE
Sbjct: 183 ADGIRRMDAF-------GVDVIIVGRGGGSIEDLWAFNEEIVARAIFACQTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV   + ++  L   E +L   +   ++ K N +   
Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYDVVRVYLDETERKLKRALSHAVEEKRNQVMQR 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + L   +    L+  R +   L       ++  +       +    R+     +  + +
Sbjct: 296 AQRLSYLHPLVKLNEKRQQAVDLEERFRQRMQERLKEAKHGLSVRAERLNGLSPVRKLGQ 355



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 2/146 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R ++ E ++ +++ +   +     +  ++   L  L      ++         L  R   
Sbjct: 267 RVYLDETERKLKRALSHAVEEKRNQVMQRAQRLSYL--HPLVKLNEKRQQAVDLEERFRQ 324

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  ++K     +S+    L   +    L +G++ +Q+     I +  ++     + I  
Sbjct: 325 RMQERLKEAKHGLSVRAERLNGLSPVRKLGQGFSYVQNEIGVNIRKIEDVCPGEILSIKV 384

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515
            DG   A V       E   K  Q  
Sbjct: 385 TDGTIRAQVTEVEKEAEDGGKHSQRE 410


>gi|167835696|ref|ZP_02462579.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           MSMB43]
          Length = 328

 Score =  290 bits (741), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 110/313 (35%), Positives = 178/313 (56%), Gaps = 8/313 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF+P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFMPREGDKIEVRALVTMYEPRGEVQLNVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ETANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L +    L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGDRRNALARGLRRGLDSRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYR 327
            +  + L      
Sbjct: 314 ISPAERLQRQSMH 326


>gi|188586316|ref|YP_001917861.1| exodeoxyribonuclease VII, large subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|226697595|sp|B2A531|EX7L_NATTJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|179351003|gb|ACB85273.1| exodeoxyribonuclease VII, large subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 423

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 133/416 (31%), Positives = 235/416 (56%), Gaps = 13/416 (3%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS+L+ +LK+++  + NL +V VRGEIS ++  HSSGH YF+LKD  + +  ++++   
Sbjct: 7   TVSQLTNYLKNLLLQDHNLKNVLVRGEISNFKH-HSSGHMYFTLKDEGASLRCVMFRNRN 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P++G++ +V G +  F  +  YQ+ +E +   G G+L  A E+ K+KL EEG+F
Sbjct: 66  WNLDFSPQDGMDVIVQGVVGIFERAGLYQLYVEKMYSHGLGSLHLAFEQLKEKLAEEGIF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
           ++++K  +P  PK IAV+TSPTGA +RD++  IS RFPL  +++ PV+VQG+    EI  
Sbjct: 126 NEEYKKTLPPFPKKIAVVTSPTGAAVRDMIVTISRRFPLTSILLIPVRVQGEYAASEIRA 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   N++         D+I++ RGGGS+E++W FN E + RAI +S  P+IS +GHETD
Sbjct: 186 GIDYANSI------DDIDVILVGRGGGSLEEIWPFNTEEVARAIFSSKAPVISCVGHETD 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T++D+ +DLRAPTPT AAE+ VP +  L+  + + + RL   +    +     +  LL 
Sbjct: 240 FTISDFVSDLRAPTPTAAAELVVPDQVELKRQVSDYKHRLTKALYHKYRNLDQRVVELLD 299

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              + N    +S  +  L+ L + L   +  +   K   ++ ++ ++ S   +  + +  
Sbjct: 300 RPVMKNPYTLISERKKELEYLDQRLLREVYHLFKLKRNKYSSLVEQLDSLSPLKTLGRGY 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH-MLREQTKNRIFYLHTHIKKLIT 425
                    I + V    +   L+          +++E+ ++ I   H+++  L  
Sbjct: 360 TFCQTHDGDIVRSVTDIEQEDILKLTFFDGSAKCLVKEKQEHHISEDHSNLNSLCN 415



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++ + + +  + + +    R +     E +     + +     I      ++ L  R+  
Sbjct: 269 KRQVSDYKHRLTKALYHKYRNLDQRVVELLDR--PVMKNPYTLISERKKELEYLDQRLLR 326

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            + H  K      S     L S +   TL RGYT  Q  + + +    ++  +  + + F
Sbjct: 327 EVYHLFKLKRNKYSSLVEQLDSLSPLKTLGRGYTFCQTHDGDIVRSVTDIEQEDILKLTF 386

Query: 490 FDGQANAIVINKA 502
           FDG A  +V  K 
Sbjct: 387 FDGSAKCLVKEKQ 399


>gi|187779510|ref|ZP_02995983.1| hypothetical protein CLOSPO_03106 [Clostridium sporogenes ATCC
           15579]
 gi|187773135|gb|EDU36937.1| hypothetical protein CLOSPO_03106 [Clostridium sporogenes ATCC
           15579]
          Length = 401

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 221/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+++ +
Sbjct: 3   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKVNCV 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F+PE G++ + +G ++ +     YQ+ ++ +   G G L  A E+ K+KL
Sbjct: 62  MFKSYAYNLKFVPENGMDVVTLGNVSVYEKEGSYQLYVKEIKREGLGDLYVAFERLKEKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLFS+ HK  IP   K I +ITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 122 KEEGLFSELHKKEIPKFSKKIGIITSPTGAALKDIINVTKRRNKGIELLIYPALVQGLDA 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            K +   I  LN +++       DIIILARGGGSIE+LW FN+E +   + NS  PII+ 
Sbjct: 182 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEDLAYEVYNSKKPIITG 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L   ++N +  + N +  +IK K N 
Sbjct: 236 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLIKEILNYKYNIKNSMENIIKEKRNY 295

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   ++  + ++  + + + + +++   ++
Sbjct: 296 LNLYKQRIESNSPINIIVNEYKNIDNLKELLNMKIKGKLNKEKNNLSRLSSLLEAHNPLN 355

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    + +++ ++
Sbjct: 356 VLKKGYTLVEDEENNL 371



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 46/102 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 297 NLYKQRIESNSPINIIVNEYKNIDNLKELLNMKIKGKLNKEKNNLSRLSSLLEAHNPLNV 356

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           LK+GYT ++D  NN IT+K  L    +I I F DG+A   + 
Sbjct: 357 LKKGYTLVEDEENNLITEKEALKELNKINITFKDGKAKLNIK 398


>gi|270292606|ref|ZP_06198817.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M143]
 gi|270278585|gb|EFA24431.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M143]
          Length = 446

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G GTL    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGTLAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K P+P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQGD   +
Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N   +       D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQRAD------LDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A P+ +    S +  + +     ++ +  +     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPITKLDLLSHLQNQEKRMATAVQNVLSRKKEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSNQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +     L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|328945560|gb|EGG39711.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK1087]
          Length = 446

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL  
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|327473382|gb|EGF18802.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK408]
          Length = 446

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL  
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IPIIS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|221633674|ref|YP_002522900.1| exodeoxyribonuclease VII large subunit [Thermomicrobium roseum DSM
           5159]
 gi|221156151|gb|ACM05278.1| exodeoxyribonuclease VII, large subunit [Thermomicrobium roseum DSM
           5159]
          Length = 405

 Score =  289 bits (739), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 136/490 (27%), Positives = 223/490 (45%), Gaps = 100/490 (20%)

Query: 17  VSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V+ L+  +K ++E   NL  + VRGEI+  R   +SGH YF+L++  + +  ++++    
Sbjct: 9   VAALTRFIKDLLEEHPNLRLLRVRGEITNARTY-ASGHWYFNLREGEAILRCVLFRSQAQ 67

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + +LP +G E +  G +  +     YQ+ +E L P G G L    E+ K+KL  EGLF 
Sbjct: 68  LLTYLPRDGDEAIASGSLGVYERDGVYQLYVEHLQPLGDGALRQQFERLKEKLEREGLFD 127

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+P  P+ IAV+TSP GAV  DI   +  R+P + +++ P +VQGD+  + +  A
Sbjct: 128 QRRKRPLPLRPRCIAVVTSPHGAVWHDIQTILRRRYPYVHLLLAPARVQGDDAVETLIAA 187

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +      +   R +++I+ARGGGS+EDLW FNDE + RAI  S IP++SAIGHETDW
Sbjct: 188 LESV------QLDGRAEVVIIARGGGSLEDLWCFNDERLARAIYASRIPVVSAIGHETDW 241

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ DY ADLRAPTP+ AAE+  P                            +   +L++ 
Sbjct: 242 TICDYVADLRAPTPSAAAELVTP----------------------------HDRRTLVRQ 273

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L + ++ L     R               + R   H   + +R+     +H +   RQ +
Sbjct: 274 LVDLEERLEALATR--------------RLVRTRDHVGQLQHRLHRAAPLHRMDNLRQRL 319

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            +  Q I++ +                                          +  +   
Sbjct: 320 DQSAQRIDRAI------------------------------------------LLRLARQ 337

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDG 492
           +       V    R L+  +    L RGY   +D  +   +   R ++    + ++F DG
Sbjct: 338 R-----QHVQALGRELELLSPYGPLARGYLLAEDSASGEVVRSIRQVSLGQALRLHFSDG 392

Query: 493 QANAIVINKA 502
           QA  IV +  
Sbjct: 393 QAETIVRSIE 402


>gi|24379058|ref|NP_721013.1| exodeoxyribonuclease VII large subunit [Streptococcus mutans UA159]
 gi|31563129|sp|Q8DVB5|EX7L_STRMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|24376955|gb|AAN58319.1|AE014902_7 putative exodeoxyribonuclease VII, large subunit [Streptococcus
           mutans UA159]
          Length = 447

 Score =  289 bits (739), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 151/494 (30%), Positives = 227/494 (45%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATMWSGI 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  YRKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAVQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +    K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDDRHKQRLSQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGEGAAQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           + I   N   +       D++I+ RGGGSIEDLW FN+E++V+AI  S +PIIS++GHET
Sbjct: 183 DNIRLANERTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKINTLN 308
           D TLAD+AAD RA TPT AAE+A PV +    +      + +    + +   K +     
Sbjct: 237 DTTLADFAADRRAATPTAAAELATPVTKADLLAFLKERQMRSYQAVMRLIRQKDEQVKKL 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LD L   L   +  +        + +  R+ S  L   IQ+
Sbjct: 297 QRSVIFRQPERLYDAYVQKLDHLRTHLLTKVRQVYDVYDSKEHLLRQRLLSFNLSGCIQR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + Q+ +                                                
Sbjct: 357 YQAQLKQDQRLLL----------------------------------------------- 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +S +  S           L S      + RGY  +Q  +N+ I   + +    R+ + 
Sbjct: 370 SHMSSQYDSKLARFEKAQDALLSLDTTRIVARGYAIVQ-KDNHIIQSTQQIKKGDRLHLE 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 MKDGQVQVEVENVK 442


>gi|313673624|ref|YP_004051735.1| exodeoxyribonuclease vii, large subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940380|gb|ADR19572.1| exodeoxyribonuclease VII, large subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 450

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 131/505 (25%), Positives = 227/505 (44%), Gaps = 60/505 (11%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +     +VSE++  +K+++E++ + V  V+GEIS       SGH YF+LKD+ ++I   +
Sbjct: 1   MAMKILTVSEITKLIKNLIENSFNEVISVQGEISNLSTSP-SGHLYFTLKDSGAQIKVAL 59

Query: 69  WKGTLN-KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++  L     + P+ G   +V G IT +     YQII + +  S  G      E+ K KL
Sbjct: 60  FRKYLALNRGYSPKNGDLVVVTGDITVYEQDGVYQIIAKKIEYSAVGLFYKKFEETKLKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             EGLF    K  IP   K IAV+TSP+GA I+D L+ +      L++ ++PV+VQG   
Sbjct: 120 EREGLFDSLRKKQIPLFIKKIAVLTSPSGAAIKDFLKILKDNGVCLKIDLWPVQVQGISA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI  +I ++++          D++IL RGGGS+EDL  FN+E+I R + +  IP I+A
Sbjct: 180 INEIVESIKKVSS------HADYDLMILMRGGGSLEDLAIFNEEVIARGLVDCPIPTITA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHE D T+ D+ AD R+PTPT AA + V     +   L + E  +   +   +      
Sbjct: 234 IGHERDVTIVDFVADFRSPTPTAAAGVIVERYRQITDLLFDGEKYIIREMENRLYRSSQR 293

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +++L   L   +    L      L      L++N+ + I        +I   +K +    
Sbjct: 294 IDNLALRLDKNSPLSKLRRVNTFLALCIETLKNNINLKINELNGRLEYINAMLKKNTPQV 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +   ++ I   ++ ++                                       K   
Sbjct: 354 KLNLAKKDIFNLEERMK---------------------------------------KDFK 374

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   L   I        +   +L++   +N LK+GY      + + IT  + ++ +  
Sbjct: 375 KRLSSSLDRII--------MFESVLKNLDPENLLKKGYCIAFR-DKSVITDVKQISLEDN 425

Query: 485 ILINFFDGQANAIVINKAPPKEQPT 509
           + I   +G  + +V+ K   +E+  
Sbjct: 426 LEIKMKNGYIHTLVVGKKNLEERNG 450


>gi|32472607|ref|NP_865601.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica SH
           1]
 gi|81835441|sp|Q7UTZ9|EX7L_RHOBA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|32443844|emb|CAD73285.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica SH
           1]
          Length = 442

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 19  ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78
           EL+  +K  VES    V V GEI+       SGH YF+LKD  S+I  ++W+    ++ F
Sbjct: 45  ELTRQIKSTVESGFPGVWVAGEITDI-ARPRSGHLYFTLKDERSQIRGVMWRSVAERLPF 103

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138
             ++G   L +G +  +     YQ+++    P G G L  A  + + KL  EGLF  + K
Sbjct: 104 ELDDGQSVLCMGDVEVYAARGSYQLVVRKCQPQGMGALQLAFAQLQAKLQAEGLFEPERK 163

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQL 197
             +P +P+ +A++TSPTGA I+D LQ  + R   + +++ P  VQG    + + + +   
Sbjct: 164 RLLPRVPRRVAIVTSPTGAAIQDFLQAAAQRHAGIEIVLIPASVQGPGSVESLIDGMRAA 223

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
           + +      P+PD++I++RGGGS+EDLW FNDE +VRAIA S IP +SA+GHE D TLAD
Sbjct: 224 HRM-----RPQPDVLIVSRGGGSLEDLWSFNDEQLVRAIAASRIPTVSAVGHEIDVTLAD 278

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315
             AD+RA TPT AA   +P ++ + ++L  L   +   + R +  +   L +        
Sbjct: 279 LVADVRALTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQ 338

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           N  + +      +D         +   + +       +     +   +  + +
Sbjct: 339 NPFEMVHDRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLAR 391



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 12/145 (8%), Positives = 45/145 (31%), Gaps = 2/145 (1%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIF 414
           +        +  +R  ++     + Q++  +L      +++++       + +     + 
Sbjct: 286 LTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQNPFEMVH 345

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +     R    +  +++     ++       + +    L RGY+  Q      + 
Sbjct: 346 DRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLARGYSVTQTDAGKVVR 405

Query: 475 QKRNLATKTRILINFFDGQANAIVI 499
              ++     +     DG   ++V 
Sbjct: 406 STGDVQPGDSLRTRLTDGDVISVVS 430


>gi|168703801|ref|ZP_02736078.1| Exonuclease VII, large subunit:nucleic acid binding, OB-fold,
           tRNA/helicase-type [Gemmata obscuriglobus UQM 2246]
          Length = 432

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 201/398 (50%), Gaps = 5/398 (1%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S          +VS+L+  ++  +E+    V V GE+S +    SSGH YF+LKD  ++
Sbjct: 1   MSAVPKPAVQPLTVSQLTAQVRGTLEAKFLSVWVAGEVSNFT-RASSGHWYFTLKDATAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I  + ++G   ++ F    G+E +  G++T +    +YQ ++E + P G G    AL + 
Sbjct: 60  IKTVAFRGINLRLRFDLRNGMEIIARGRLTVYDPKGEYQFVVEEVQPKGVGGAELALRQL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182
           K+KLL +G FS   K P+P  P+ + +I S TGA +RD+++  + R+P   +++ P +VQ
Sbjct: 120 KEKLLAKGYFSPARKRPLPRPPQRVGLIASATGAAVRDMIEVFAQRWPFTELVVRPSRVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+   +++A A+LQLN L         D I+L RGGGS EDLW FN+E++  A+  S +P
Sbjct: 180 GEGAAQDVARALLQLNWLHRNNK-LAFDAIVLGRGGGSAEDLWAFNEEVVADAVFKSEVP 238

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SA+GHETD T+AD  AD RA TPT A     P +  L +SL  L  R+   + R ++ 
Sbjct: 239 VVSAVGHETDVTVADLVADHRAETPTAAVIALTPDRRELLASLGELRERMGESVARRLRL 298

Query: 303 KINTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               L+ +   +A     Q +  S  RLD +   L       + +  +       +++S 
Sbjct: 299 AKQRLDQIAARQAFRLPLQRVHNSGQRLDDIAERLHRAARHRLLQAAQELAGRSAQLESL 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +  + +           + + V        L  + +
Sbjct: 359 SPLQVLGRGYSLTHTGDGRLVREVDHLRPGDLLLTRVR 396



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 1/159 (0%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQTKNRIFYLHTHIKKLITRI 427
            R+ +    +  E++ +   R + L K+    I           R+      +  +  R+
Sbjct: 274 RRELLASLGELRERMGESVARRLRLAKQRLDQIAARQAFRLPLQRVHNSGQRLDDIAERL 333

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
                H++      ++  +  L+S +    L RGY+     +   + +  +L     +L 
Sbjct: 334 HRAARHRLLQAAQELAGRSAQLESLSPLQVLGRGYSLTHTGDGRLVREVDHLRPGDLLLT 393

Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG 526
               G   ++V    P   + T      ++  +     G
Sbjct: 394 RVRGGTVRSLVTATEPTDPERTNPGARDSDPDQTPAAGG 432


>gi|309389166|gb|ADO77046.1| exodeoxyribonuclease VII, large subunit [Halanaerobium praevalens
           DSM 2228]
          Length = 419

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 208/371 (56%), Gaps = 12/371 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           D   YSV+E++ +LK++++ +  L+   + GEIS +   HSSGH Y +LKD +S++  ++
Sbjct: 14  DKKIYSVAEITKYLKNLIKEDPFLNDFWLSGEISNF-YHHSSGHMYLTLKDKNSQLKTVM 72

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +KG  +K++F PE+G++    G +  +    +YQ     +  +G G L    +K K +L 
Sbjct: 73  FKGDNSKLDFEPEDGMQVEAKGNLDIYSQRGEYQFYARQMKKAGKGKLYEKYQKLKSELE 132

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187
           +EGLF+   K  IPF+   I ++TSPTGA +RDIL  +  R     V+I P  VQG    
Sbjct: 133 KEGLFAVSKKQEIPFLANKIGIVTSPTGAAVRDILSVMKRRSSNFSVLIVPAHVQGKLAQ 192

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            EI+  I  LN+          D+II++RGGGSIEDLW FN+E + RAI NS +P+IS +
Sbjct: 193 AEISAGIRYLNSR------NDIDLIIVSRGGGSIEDLWPFNEEKVARAIYNSKLPVISGV 246

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+AD+ ADLRAPTP+ AAE+A   +E + + L NL  RL N  +  IK   N L
Sbjct: 247 GHETDFTIADFVADLRAPTPSAAAELATANREEVLTRLDNLTKRLLNSSLTKIKESKNKL 306

Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           NS+   K   +  +        LD L  +L H +E         +  +  ++ +   +  
Sbjct: 307 NSIEARKIFSSPAELFRDYEQELDNLETQLVHQIEKNYQDWENKYQLLHQKLNNLSPLKT 366

Query: 366 IQKNRQHILEK 376
           + +    + ++
Sbjct: 367 LDRGYTILQDQ 377



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 5/162 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +    +  E    ++ + K+ L     + KE    L+
Sbjct: 248 HETDFTIADFVADLRAPTPSAAAELATANREEVLTRLDNLTKRLLNSSLTKIKESKNKLN 307

Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +  +                +  L T++   +    +       +  + L + +   TL
Sbjct: 308 SIEARKIFSSPAELFRDYEQELDNLETQLVHQIEKNYQDWENKYQLLHQKLNNLSPLKTL 367

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            RGYT +QD     I   + +     +     DG A   + +
Sbjct: 368 DRGYTILQDQTKKPIKSIKEIEIGDLVKARLTDGLAEVEIKD 409


>gi|327543065|gb|EGF29508.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica
           WH47]
          Length = 442

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 19  ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78
           EL+  +K  VES    V V GEI+       SGH YF+LKD  S+I  ++W+    ++ F
Sbjct: 45  ELTRQIKSTVESGFPGVWVAGEITDI-ARPRSGHLYFTLKDERSQIRGVMWRSVAERLPF 103

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138
             ++G   L +G +  +     YQ+++    P G G L  A  + + KL  EGLF  + K
Sbjct: 104 ELDDGQSVLCMGDVEVYAARGSYQLVVRKCQPQGMGALQLAFAQLQAKLQAEGLFEPERK 163

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQL 197
             +P +P+ +A++TSPTGA I+D LQ  + R   + +++ P  VQG    + + + +   
Sbjct: 164 RLLPRVPRRVAIVTSPTGAAIQDFLQAAAQRHAGIEIVLIPASVQGPGSVESLIDGMRAA 223

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
           + +      P+PD++I++RGGGS+EDLW FNDE +VRAIA S IP +SA+GHE D TLAD
Sbjct: 224 HRM-----RPQPDVLIVSRGGGSLEDLWSFNDEQLVRAIAASRIPTVSAVGHEIDVTLAD 278

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315
             AD+RA TPT AA   +P ++ + ++L  L   +   + R +  +   L +        
Sbjct: 279 LVADVRALTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQ 338

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           N  + +      +D         +   + +       +     +   +  + +
Sbjct: 339 NPFEMVHDRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLAR 391



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 12/145 (8%), Positives = 45/145 (31%), Gaps = 2/145 (1%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIF 414
           +        +  +R  ++     + Q++  +L      +++++       + +     + 
Sbjct: 286 LTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQNPFEMVH 345

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +     R    +  +++     ++       + +    L RGY+  Q      + 
Sbjct: 346 DRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLARGYSVTQTDAGKVVR 405

Query: 475 QKRNLATKTRILINFFDGQANAIVI 499
              ++     +     DG   ++V 
Sbjct: 406 STGDVQPGDSLRTRLTDGDVISVVS 430


>gi|77919269|ref|YP_357084.1| exodeoxyribonuclease VII, large subunit [Pelobacter carbinolicus
           DSM 2380]
 gi|123729451|sp|Q3A3Z3|EX7L_PELCD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|77545352|gb|ABA88914.1| Exodeoxyribonuclease VII large subunit [Pelobacter carbinolicus DSM
           2380]
          Length = 401

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 200/354 (56%), Gaps = 8/354 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS L Y LK +VE N   V V GEI+ +    SSGH YF++KD+ +++  ++++ +   
Sbjct: 9   SVSRLVYLLKEVVEDNFVQVLVTGEIANFSA-PSSGHYYFAVKDDQAQLRGVMFRSSNRL 67

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F PE G++ L  G+++ +P   + Q++++ + P G G+   A EK K KL  EGLF  
Sbjct: 68  LKFTPENGMQVLCGGRVSLYPQRGELQLVVDRMEPLGVGSWQLAFEKLKTKLDAEGLFEV 127

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAI 194
             K  +P  P+ I V+TSPTGA I DIL  +  R   L V++ PV+VQGD    EIA AI
Sbjct: 128 GRKRRLPSFPRTIGVVTSPTGAAIHDILNVLRRRGAGLHVLLSPVRVQGDGAADEIARAI 187

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N   +       D++I+ RGGGS EDLW FN+E++ RA+  S IP+ISA+GHE D T
Sbjct: 188 ADFNRHGQA------DVLIVGRGGGSPEDLWAFNEEVVARAVFASRIPVISAVGHEVDVT 241

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D  ADLRAPTP+ AAE+ V  ++ L+  + +L  RL+  +   +      L+ L + L
Sbjct: 242 ISDLVADLRAPTPSAAAELVVQGRQELERHVDHLVMRLSGQMQGRLSLLKERLDGLRRRL 301

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +    L      L++L + L   +E  + R         +R+ +   +  + +
Sbjct: 302 RSPVDDLRRQYRDLEQLRKRLFSAMEKTMQRAANRLGLAGSRLHALSPLATLDR 355



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 72/228 (31%), Gaps = 5/228 (2%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
             ++         +   I    ++    +  + +   + +   + +   + R        
Sbjct: 170 SPVRVQGDGAADEIARAIADFNRHGQADVLIVGRGGGSPEDLWAFNEEVVARAVFASRIP 229

Query: 339 LEIII-FRKYRHFNHIINRIKSDFLIHNIQ---KNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +   +        + ++  +++       +   + RQ +     H+   +   ++     
Sbjct: 230 VISAVGHEVDVTISDLVADLRAPTPSAAAELVVQGRQELERHVDHLVMRLSGQMQGRLSL 289

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
            KE++  L        + +   +  +++L  R+   +   ++     + +    L + + 
Sbjct: 290 LKERLDGLRRRLRSPVDDLRRQYRDLEQLRKRLFSAMEKTMQRAANRLGLAGSRLHALSP 349

Query: 455 KNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINK 501
             TL RGY  +     +  +   R L    R+ I F  G   A V   
Sbjct: 350 LATLDRGYAIVFSAKTSTIVRDARTLTPGDRVQIRFAKGSVEATVDEV 397


>gi|170759118|ref|YP_001787213.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A3
           str. Loch Maree]
 gi|226694645|sp|B1KT53|EX7L_CLOBM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169406107|gb|ACA54518.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A3
           str. Loch Maree]
          Length = 401

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  E G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K I VITSPTGA I+DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEGLFDDAHKKEIPKFSKKIGVITSPTGAAIKDIINVTKRRNKGIELLIYPALVQGTDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            K +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+A   +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIIDFVSDRRAPTPSAAAEIAAFDREVLINEILNYKYNIKNSMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    ++     +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 46/102 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   + 
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSIK 396


>gi|254518732|ref|ZP_05130788.1| exodeoxyribonuclease VII [Clostridium sp. 7_2_43FAA]
 gi|226912481|gb|EEH97682.1| exodeoxyribonuclease VII [Clostridium sp. 7_2_43FAA]
          Length = 399

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 218/376 (57%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+EL+ ++K  ++++   +++ V+GE+S  +  HSSGH YFSLKD+ S+I+ +
Sbjct: 1   MRIKTLTVNELNNYIKKTLDNDFILNNLLVKGEVSNLK-YHSSGHIYFSLKDSISKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F   EG+E +   + + +PG+   Q+ IE L   G G L    EK KKKL
Sbjct: 60  MFKSNSADLDFKLIEGMEVIANARCSIYPGTGSLQLYIEKLQKEGIGELHIKFEKLKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EG F +Q+K  IP +PK I V+TS TGAVIRDI+     R   + ++++P  VQG+  
Sbjct: 120 QDEGYFDEQYKKEIPKMPKRIGVVTSETGAVIRDIINVSKRRSSLIDIVLYPALVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            K I N I   N           D+II+ RGGGSIE+LW+FN+E + + I  S +PIISA
Sbjct: 180 YKTIINGIKYFN------DTKSVDVIIVGRGGGSIEELWNFNEEDLAKEIFKSKLPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D RA TP+ AAE+AVP++  +   + N   R+N I+     Y+   
Sbjct: 234 VGHEVDFTISDFVSDYRASTPSQAAEIAVPLESDIMYEIDNYNKRINEIVFNKFSYEKEK 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L++  K L   + +  LS S   LDR+   ++  +   I ++      + + +++   I+
Sbjct: 294 LSNYKKILSLNSPEVILSNSYLELDRIEDRMKKLVFNKIEKEKLKIKSLNDILEAHNPIN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    + + +++I
Sbjct: 354 VLKKGYTIVEDNEKNI 369



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 2/129 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I    + I +IV     Y   +      IL       +  +   +  + ++  R++ ++
Sbjct: 271 EIDNYNKRINEIVFNKFSYEKEKLSNYKKILS--LNSPEVILSNSYLELDRIEDRMKKLV 328

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            +KI+     +     IL++    N LK+GYT ++D   N I+ K  +       I F D
Sbjct: 329 FNKIEKEKLKIKSLNDILEAHNPINVLKKGYTIVEDNEKNIISSKEEIKDLDEFNIIFKD 388

Query: 492 GQANAIVIN 500
           G+    +I+
Sbjct: 389 GKVKGKIIS 397


>gi|315185824|gb|EFU19590.1| Exodeoxyribonuclease VII large subunit [Spirochaeta thermophila DSM
           6578]
          Length = 414

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 123/363 (33%), Positives = 189/363 (52%), Gaps = 10/363 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+    +SVSE++  +K  +E    +V V+GEIS  R   S+GH YFSLKD  + ++ ++
Sbjct: 2   SIPQKVFSVSEITSLIKGYLEDAFPYVAVQGEISNCR-PSSTGHLYFSLKDERAVLNVVM 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    ++ F P++G+  L  G ++ +     YQ++ E L   G G LL  LEKRK+KL 
Sbjct: 61  FQSRYRRLSFQPKDGMMVLAKGALSVYEARGAYQLVCEELEQVGVGALLEMLEKRKQKLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
            EGLF  + K PIP  P  IAV+TSPTGA +RDI+  ++ R   + +++ P  VQG+   
Sbjct: 121 AEGLFDKERKRPIPLFPSRIAVVTSPTGAAVRDIINVLTRRNAGVDIVVVPAPVQGENAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             IA  I +             D+II+ARGGGSIEDL  F++E++VRAIA    P+ISA+
Sbjct: 181 PIIAEQIRR------ADAWKLGDVIIVARGGGSIEDLLPFSEEVVVRAIAACETPVISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+TL+D+AADLRAPTP+ AAEM    +E L   + +    +   I  L +      
Sbjct: 235 GHEIDYTLSDFAADLRAPTPSAAAEMVSAHREELLQRVHHAHLTMVREIRSLCERLRFRL 294

Query: 307 LNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                + L             R D   + +   +   + +            ++      
Sbjct: 295 GKVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMREYLLKLRHRIEMAREITQAHSPRAV 354

Query: 366 IQK 368
           + +
Sbjct: 355 LSR 357



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 6/174 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  +     +++       +    H  E  Q +       +R I    +     L 
Sbjct: 236 HEIDYTLSDFAADLRAPTPSAAAEMVSAHREELLQRVHHAHLTMVREIRSLCERLRFRLG 295

Query: 404 MLREQTKNRIFYLH-----THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            + E+   R+F L+         +    I   +   +      + +   I Q+ + +  L
Sbjct: 296 KVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMREYLLKLRHRIEMAREITQAHSPRAVL 355

Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
            RGY  ++D    + +   R      R+ I    G+  A     APP+++    
Sbjct: 356 SRGYAIVRDAATGDILRDTRAAFEGQRLSITLARGELEARTTQVAPPEDESATT 409


>gi|118442873|ref|YP_878053.1| exodeoxyribonuclease VII large subunit [Clostridium novyi NT]
 gi|158512406|sp|A0Q0A1|EX7L_CLONN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|118133329|gb|ABK60373.1| exodeoxyribonuclease VII, large subunit [Clostridium novyi NT]
          Length = 400

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 129/375 (34%), Positives = 212/375 (56%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      VSEL+ ++K++++++    +  ++GEIS ++ IH SGH YFSLKD +S+I+ I
Sbjct: 1   MQMKTLGVSELNNYIKNVIDNDFILKNSKIKGEISNFK-IHISGHIYFSLKDKNSKINCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     ++F+PE G   ++ G+++ +     YQ   E +   G G L  A E  KKKL
Sbjct: 60  MFRSYARGLKFIPENGDNVILKGRVSVYQKDGAYQFYCEDIEKEGVGDLFIAFEALKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             EGLF + +K  IP   K I VITSPTGA ++DI+     R   + ++I+P  VQG+  
Sbjct: 120 YNEGLFDEYNKKEIPRFAKKIGVITSPTGAAVKDIINVSKRRNKGVELLIYPALVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           PK++ N I   +           D II+ARGGGSIE+LW FN+E +  AI N + P+IS 
Sbjct: 180 PKDLINGINYFSNR------DDIDTIIIARGGGSIEELWAFNNEDLAYAIYNCNKPVISG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+ V     + +++ N + RL N+I   I  K   
Sbjct: 234 VGHETDFTICDFVSDRRAPTPSAAAEIGVFNLNEVNTNIENYKNRLYNLIRNTINLKFKE 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LNSL  A+   +   T++    R+D L  +L H +E  I  +    +   + + +   ++
Sbjct: 294 LNSLENAIKINSPMNTIANEYIRIDNLKNKLCHKIESKIEYEKIKLSKANSLLNAHNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I +++ +
Sbjct: 354 ILSRGFSIIKDEKNN 368



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 2/137 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+ +   +I   +  +  +++  +   F E       + +      N I   +  I  L 
Sbjct: 264 NLNEVNTNIENYKNRLYNLIRNTINLKFKELNSLENAIKI--NSPMNTIANEYIRIDNLK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            ++   +  KI+     +S    +L +    N L RG++ I+D  NN IT K  +   T 
Sbjct: 322 NKLCHKIESKIEYEKIKLSKANSLLNAHNPLNILSRGFSIIKDEKNNVITTKEKIEENTC 381

Query: 485 ILINFFDGQANAIVINK 501
           I I   DG     + + 
Sbjct: 382 INITLKDGSTKVRISDV 398


>gi|291542869|emb|CBL15979.1| exodeoxyribonuclease VII, large subunit [Ruminococcus bromii L2-63]
          Length = 404

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 131/360 (36%), Positives = 207/360 (57%), Gaps = 11/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SVS+L++++K I+E++  L+ V V GEIS     + SGH Y S+KD  S I A+++ G
Sbjct: 11  VLSVSQLNFYIKSIIENDARLNFVFVTGEISNLTDHYRSGHIYLSIKDEKSVIRAVMFAG 70

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               ++F P +G + +  G++  +  + +YQ+ IE + P G GTL  A E+ KK L E+G
Sbjct: 71  NARNLKFRPTDGTKVICRGRVAVYEPTGQYQLYIEDMQPDGIGTLSLAYEQLKKSLAEKG 130

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+ +HK  IP  P  I VITSPTGA ++DI   +S RFP   +I+ PV VQGD  P ++
Sbjct: 131 LFAPEHKKKIPPFPNSIGVITSPTGAAVQDIRNILSRRFPSADIIMCPVLVQGDNAPAQL 190

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +A+ +L+           D+II+ RGGGSIEDLW FNDE +  AI N  IP+ISA+GHE
Sbjct: 191 IDAVQKLDK------YNACDVIIIGRGGGSIEDLWAFNDENLAYAIYNCKIPVISAVGHE 244

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+ D+ +DLRAPTP+ AAE+AVP    L     + +  ++++    ++ + N L  L
Sbjct: 245 TDFTICDFVSDLRAPTPSAAAELAVPDTAELVDYYKSQKQYVSSMATLKLRQEYNALTEL 304

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  Q +       +    +++H ++  I +K         +++    +  + +
Sbjct: 305 KTRLSVVSPQQRIFEYEKSFELCKTKIQHFVQETINKKAADITKTAAKLEGLNPVKILSR 364



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 6/152 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----T 409
           + +++       +       E   + +   +       L+ +++   L  L+ +      
Sbjct: 254 SDLRAPTPSAAAELAVPDTAELVDYYKSQKQYVSSMATLKLRQEYNALTELKTRLSVVSP 313

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           + RIF      +   T+I+  +   I      ++ T   L+       L RGY+  +  +
Sbjct: 314 QQRIFEYEKSFELCKTKIQHFVQETINKKAADITKTAAKLEGLNPVKILSRGYSIAE-KD 372

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501
              +   + L +     + F DG+  A    +
Sbjct: 373 GKAVNSAKMLKSGDEFTLRFSDGEIKAKATGE 404


>gi|240145665|ref|ZP_04744266.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis
           L1-82]
 gi|257202254|gb|EEV00539.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis
           L1-82]
          Length = 408

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/363 (32%), Positives = 199/363 (54%), Gaps = 13/363 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           D   YSV +++ ++K++   +     + V+GE+S  +  H+SGH YF++KD    ++A++
Sbjct: 9   DENVYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVM 67

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           + G+   ++F  +EG + +V G +  +    KYQI    +   G+G L    E  K++L 
Sbjct: 68  FAGSRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELE 127

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
           E G+F+ ++K PIP     I V+T+PTGA ++DI    + R P  ++I++P  VQGD   
Sbjct: 128 EMGMFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAV 187

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I N I  L+ L         D++I+ RGGGSIEDLW FN+E + RAI     P+ISA+
Sbjct: 188 ESIVNGIHALDAL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAV 240

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETDWT+AD+ ADLRAPTP+ AAE+AV     ++  L  ++ R+  + ++ I+     L
Sbjct: 241 GHETDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKEL 300

Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 L   + +  L   R     L  +L + +E +I  +      +  R++    +  
Sbjct: 301 EHAKDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKK 360

Query: 366 IQK 368
           + +
Sbjct: 361 LAQ 363



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E ++ +  +  Q ++ +  E +     L  L    + ++     +   L  ++   +
Sbjct: 277 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 334

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            H I+     +++ +  L+  +    L +GY+ + D N + +T    +    R+ I    
Sbjct: 335 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHTLTDAEGVKAGDRVKIRLLK 394

Query: 492 GQANAIVINK 501
           G   A V   
Sbjct: 395 GALEAEVTEV 404


>gi|168215450|ref|ZP_02641075.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           NCTC 8239]
 gi|182382408|gb|EDT79887.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           NCTC 8239]
          Length = 400

 Score =  288 bits (737), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  I R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSSAGELVSPSLQEMINDLVNKKEFLHRAIDRKFLNAKRD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKKDK 368



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 6/136 (4%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKL 423
           +Q+    ++ K++ + + +       FL  K  + +LH        K+ I      +  L
Sbjct: 265 LQEMINDLVNKKEFLHRAI----DRKFLNAKRDVDLLHKGLKGNNPKHIIEKRIKEVNSL 320

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L    
Sbjct: 321 EEKLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKKDKVINKVSELKKND 380

Query: 484 RILINFFDGQANAIVI 499
            + +   DG  N  + 
Sbjct: 381 MVKVIMKDGSVNIDIK 396


>gi|290580923|ref|YP_003485315.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           mutans NN2025]
 gi|254997822|dbj|BAH88423.1| putative exodeoxyribonuclease VII large subunit [Streptococcus
           mutans NN2025]
          Length = 447

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 151/494 (30%), Positives = 227/494 (45%), Gaps = 62/494 (12%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD  + I A +W G 
Sbjct: 5   LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATMWSGI 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E G 
Sbjct: 63  YRKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAVQFEQLKKKLAEAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  +    K I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +E+A
Sbjct: 123 FDDRHKQRLSQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGEGAAQEVA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           + I   N   +       D++I+ RGGGSIEDLW FN+E++V+AI  S +PIIS++GHET
Sbjct: 183 DNIRLANERTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKINTLN 308
           D TLAD+AAD RA TPT AAE+A PV +    +      + +    + +   K +     
Sbjct: 237 DTTLADFAADRRAATPTAAAELATPVTKADLLAFLKERQMRSYQAVMRLIRQKDEQVKKL 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    ++       +LD L   L   +  +        + +  R+ S  L   IQ+
Sbjct: 297 QRSVIFRQPERLYDAYVQKLDHLRTHLLTKVRQVYDVYDSKEHLLRQRLLSLNLSGCIQR 356

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +  + + Q+ +                                                
Sbjct: 357 YQAQLKQDQRLLL----------------------------------------------- 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +S +  S           L S      + RGY  +Q  +N+ I   + +    R+ + 
Sbjct: 370 SHMSSQYDSKLARFEKAQDALLSLDTTRIVARGYAIVQ-KDNHIIQSTQQIKKGDRLHLE 428

Query: 489 FFDGQANAIVINKA 502
             DGQ    V N  
Sbjct: 429 MKDGQVQVEVENVK 442


>gi|324993387|gb|EGC25307.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK405]
          Length = 446

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ +KKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E R++  +   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAMSNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++      
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPFSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|303232264|ref|ZP_07318963.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae
           PB189-T1-4]
 gi|302481674|gb|EFL44735.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae
           PB189-T1-4]
          Length = 451

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 131/498 (26%), Positives = 198/498 (39%), Gaps = 56/498 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIW 69
                SV +     K  + S+L  +CV GE+SG+RG    SGH YF LKD  + +D IIW
Sbjct: 4   TQSYLSVFDAVTLAKDAL-SSLPSICVAGEVSGFRGPNARSGHCYFQLKDAQASMDTIIW 62

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           + T        ++G++    G  + +  S K   +I S    G G L   +    KKL  
Sbjct: 63  RSTYENANIELKDGMQIEARGSFSVYAASGKMSFVITSFHLVGEGALRQQVALLAKKLQA 122

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPK 188
           EGL  D  K  IP     I V TS +G+VI D+ + ++ R PL VI +    VQG   P+
Sbjct: 123 EGLMDDARKRSIPRFCNRICVCTSLSGSVIDDVKRTLARRNPLVVIQVVGCAVQGAHAPE 182

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I  A+              PD I+L RGGGS EDL  FNDE + RA+A S+IP+I+ IG
Sbjct: 183 TICRALRVAQEA-------APDAILLVRGGGSFEDLMCFNDERVARAVAASTIPVITGIG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D ++ D  +D R  TPT AAE   P       +L  L+  L     RL +++ +T+ 
Sbjct: 236 HEPDVSICDLVSDRRTSTPTAAAESVAP-------ALDELQHVLAQRQDRLQQWRRSTIT 288

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L  S + L  ++                 + R   +   +            +  
Sbjct: 289 QASSELAQSRERLLRAQRSC--------------LSRAASYVASLAQHQCLLSSNGFLID 334

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  +    +                                  +      ++     ++
Sbjct: 335 KRTQLELTSERFYAARG-------------------------RMLTPAAQMLQTNTANMQ 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            I    + S   +V +    L++      LKRGY+ +QD   + IT          I I 
Sbjct: 370 HIARSLVSSKKHAVDLLATSLEALNPLYALKRGYSLVQDERGHVITSACACTPGDDISIW 429

Query: 489 FFDGQANAIVINKAPPKE 506
              G  +A V +     +
Sbjct: 430 LKSGAVSAHVTSVDADAQ 447


>gi|34556985|ref|NP_906800.1| exodeoxyribonuclease VII large subunit [Wolinella succinogenes DSM
           1740]
 gi|34482700|emb|CAE09700.1| EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT [Wolinella succinogenes]
          Length = 422

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 124/493 (25%), Positives = 211/493 (42%), Gaps = 85/493 (17%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSEL+  +K ++E+    V VRGE+S     H+SGH Y +LKD+ S I A+++KG  
Sbjct: 4   VLSVSELNIQVKSLLEATFLQVAVRGEVSNLT-YHTSGHIYLTLKDSSSSIRAVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           ++++F  E G++  + G +  +    +YQII ++  P+G G+L  A E+ KK+L   G F
Sbjct: 63  SRLKFRLENGMDVTLYGGLGVYTPRGEYQIIAQNAEPTGVGSLALAFEQLKKELAALGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK P+P  P  IA++TS TGA ++D+L+  + R+P +++I     VQG+   + IA 
Sbjct: 123 DPAHKKPLPPFPSTIALLTSATGAALQDMLRVATKRWPLVKIIGLNTLVQGEGAKESIAK 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   ++L         D+I++ RGGGS+EDLW FN+ ++  AI ++  PI+SA+GHE D
Sbjct: 183 NIAYADSL-------GVDVIVVGRGGGSLEDLWAFNERIVAEAIYHAKTPIVSAVGHEVD 235

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
             ++D+ ADLRAPTP+ A E+ +P                                    
Sbjct: 236 VVISDFVADLRAPTPSSAMELILPDCSEWLI----------------------------- 266

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                         RLD    E       I+ ++      + + +    L   +++    
Sbjct: 267 --------------RLDGFLDEFRRAFNRILQKRESELKSLQDSLDRLSLAARLKERESR 312

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           I E    + Q +                         ++++    + ++    R E    
Sbjct: 313 IKELWSSLNQAM-------------------------RHQLRRQESQLEPWRGRFEGAWE 347

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLATKTRILINFFD 491
              +     V+      +         +GY   +       +     L           D
Sbjct: 348 MLWRFKTQEVAGYIERYKEADPLKWCHKGYAQVVSHKE---VKTLEALERDEVF--ELLD 402

Query: 492 G--QANAIVINKA 502
           G  +  A V+ K 
Sbjct: 403 GKWRVQAKVLEKE 415


>gi|313901603|ref|ZP_07835042.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468133|gb|EFR63608.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 481

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 201/360 (55%), Gaps = 12/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VSEL+  ++  +ES+  L  V VRGE+S  +  HSSGH YFSL+D  + +  ++++ 
Sbjct: 70  VLTVSELTARIRLRLESDARLRQVWVRGELSSCK-RHSSGHLYFSLQDEGATLRCVMFRS 128

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F PE+G+E L +G++  +  +  YQ+ +E+L P+G G L  ALE+R+++L  EG
Sbjct: 129 AARHLGFTPEDGMEVLALGRVGVYEPAGTYQLYVETLEPAGLGALYLALEQRRQRLAREG 188

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K P+P  P+ I VITS  GA +RDIL+    R P L+V++ PV VQG+   + I
Sbjct: 189 LFDPARKRPLPAWPRCIGVITSADGAALRDILKVALRRNPRLQVVVAPVPVQGEGAAQAI 248

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI + N         R D++I+ RGGG+ EDLW FN+E +VRA+A S IP++SA+GHE
Sbjct: 249 AEAIRRFNR------WGRADVLIVGRGGGAREDLWAFNEEEVVRAVAASRIPVVSAVGHE 302

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL--EARLNNIIIRLIKYKINTLN 308
            D TL D AAD+RAPTP+ AAE+  P    ++  L  L                +     
Sbjct: 303 VDVTLCDLAADVRAPTPSAAAEVVAPELAPMERRLAELSGRLEGGVRRRLERARRRLEEL 362

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +    L +  Q ++  R RL+RL ++L       +    +       R+++   +  + +
Sbjct: 363 AGRPGLRHPAQQVAAWRQRLERLRQDLARAAGWRVAGGRQRLASATGRLEALSPLSVLGR 422



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 40/105 (38%)

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
                 ++      +++L   +      ++      ++  T  L++ +  + L RGY+  
Sbjct: 368 LRHPAQQVAAWRQRLERLRQDLARAAGWRVAGGRQRLASATGRLEALSPLSVLGRGYSIT 427

Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
           +  +   +T+   +    R+ +    G+ +A V+   P +  P  
Sbjct: 428 RTRDGRVVTRAGQVRPGDRVEVLLARGRLDAQVLASWPGEGTPLP 472


>gi|332362898|gb|EGJ40691.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK49]
          Length = 446

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 234/500 (46%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ +KKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A  V +  L   L   E R++  +   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAMSNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|323484854|ref|ZP_08090210.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum
           WAL-14163]
 gi|323401850|gb|EGA94192.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum
           WAL-14163]
          Length = 404

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 191/360 (53%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV++++ ++K++   +   S + V+GE+S  +  HSSGH YF+LKD    I A+++ G
Sbjct: 7   VYSVAQVNAYIKNMFAQDFALSRISVKGEVSNCK-YHSSGHIYFTLKDGLGAIQAVMFAG 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F+ EEG + +V G +  +    +YQ+    +   G+G L    EK + +L E G
Sbjct: 66  KRRGLNFVLEEGQQVVVKGSVEVYERDGRYQLYAAEITLDGTGDLFKRFEKLRNELEEMG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+ ++K+PIP     + ++T+ TGA IRDI+     R P +++++ P +VQG+     I
Sbjct: 126 MFAPEYKSPIPKYAMKVGIVTASTGAAIRDIINIARRRNPYVQLVLCPAQVQGEGAASSI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A  I  L+ +         D++I+ RGGGSIEDLW FN+E + RAI     P+ISA+GHE
Sbjct: 186 ARGIETLDAM-------GLDVLIVGRGGGSIEDLWAFNEETVARAIFACKTPVISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV      +  L     +L   +    +     L   
Sbjct: 239 TDVTIADYVADLRAPTPSAAAELAVFDYALFEGQLREAGQKLYRALSGRKEMAAYRLEQY 298

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   N ++ L+  R RL      +E  L+  +  +      +  R+     +  I K
Sbjct: 299 RLRLRLYNPERQLNEKRQRLADAEERMERLLKQKLTDRKHRLALLSGRLHGLSPLEKISK 358



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 2/134 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E  Q + + +    R      + +   L +     + ++      +     R+E +L
Sbjct: 272 QLREAGQKLYRALSG--RKEMAAYRLEQYRLRLRLYNPERQLNEKRQRLADAEERMERLL 329

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K+      +++ +  L   +    + +G+  +   +   +    ++     +LI   D
Sbjct: 330 KQKLTDRKHRLALLSGRLHGLSPLEKISKGFGFLTGEDGKRVESAESVKAGDHLLIRVLD 389

Query: 492 GQANAIVINKAPPK 505
           G+  A V+      
Sbjct: 390 GRIEAEVVKAEKSG 403


>gi|256828742|ref|YP_003157470.1| exodeoxyribonuclease VII, large subunit [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577918|gb|ACU89054.1| exodeoxyribonuclease VII, large subunit [Desulfomicrobium baculatum
           DSM 4028]
          Length = 456

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/507 (23%), Positives = 207/507 (40%), Gaps = 77/507 (15%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +SV  L+  +K ++E     V VRG++S       SGH YFSLKD+ + +  + +KG  
Sbjct: 3   IFSVRTLTQAIKDVLEGEFPFVWVRGQVSNL-SRPPSGHVYFSLKDDDATLSVVWFKGAQ 61

Query: 74  -------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
                              +   F   +G E LV G++  +P    YQ++ E +   G G
Sbjct: 62  PKGSVDGGERVNPVTGEVESGEPFALCDGQEVLVAGRMNVYPPRGAYQLVAELVQGQGLG 121

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLR 173
            L  A E  K KL  +G F    K  +P  P+ +AV+T+P GA ++D L+    R +   
Sbjct: 122 ELAVAFEAMKAKLAAKGYFDPDRKMVLPRNPRRVAVVTAPQGAALQDFLRIADDRGYGAT 181

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           + ++P  VQG+  P +IA A+ + +           ++I L RGGGS+EDLW FN E + 
Sbjct: 182 IRVYPSLVQGESAPAQIAAALDRADRDGWA------EVIALIRGGGSLEDLWAFNTEPVA 235

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
            A+  + +P++  +GHE D ++AD  AD RA TP+ AA++    +  L+     +   L 
Sbjct: 236 EAVFRARLPVVCGVGHEVDTSIADLVADQRAATPSHAAQILWTERGVLRQQADEIFLALT 295

Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
             + RL+  +   L    + L   +  + +    + L+RL   L   +   +  +     
Sbjct: 296 RGMDRLLDLRERDLQRHAQGLAWHSPARRIERGGFELERLAGRLRQAIRTQVESRAATLV 355

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +R+   F    +   R  +   Q  +EQ+  + +R      +     L  L      
Sbjct: 356 RLEDRMYRSFGPAAMLSLRSELDRAQGALEQVGSRFVRVRLESLRGVEGRLAALDPAAPL 415

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
                                                           RGY  ++ +   
Sbjct: 416 A-----------------------------------------------RGYALVRGSAG- 427

Query: 472 FITQKRNLATKTRILINFFDGQANAIV 498
           F+  + ++     I +   DG+ +A V
Sbjct: 428 FVRSREDVQAGDEIRVQVADGEFSAEV 454


>gi|169343533|ref|ZP_02864532.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens C
           str. JGS1495]
 gi|169298093|gb|EDS80183.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens C
           str. JGS1495]
          Length = 400

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  + R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLVNKKEFLHRAVDRRFLNSKRD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKEDK 368



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+    ++ K++ + + V +  R++  ++   +    +     K+ I      +  L  
Sbjct: 265 LQEMINDLVNKKEFLHRAVDR--RFLNSKRDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L     +
Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|319793939|ref|YP_004155579.1| exodeoxyribonuclease vii, large subunit [Variovorax paradoxus EPS]
 gi|315596402|gb|ADU37468.1| exodeoxyribonuclease VII, large subunit [Variovorax paradoxus EPS]
          Length = 470

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 192/380 (50%), Gaps = 9/380 (2%)

Query: 6   QKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
           + NS   P  ++V  L   +   +++  + V VRGEISG+    SSGH YFSLKD   ++
Sbjct: 33  ETNSAPGPRIWAVGALCRAVADTLDARFNPVSVRGEISGF-SRASSGHCYFSLKDESGQL 91

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              +++     ++F P +G +  V G++  +      Q+++ESL  +G G L     +RK
Sbjct: 92  RCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLRRAGQGALFEQFLQRK 151

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            +L  EGLF    K  +P +P+ + V+TS   A + D++  +  R P + V++ P  VQG
Sbjct: 152 ARLEAEGLFDPARKRALPTMPRAVGVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQG 211

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
              P E+  A+  L TL      P  D+I+L RGGGSIEDLW FNDE + R I  S +P+
Sbjct: 212 ANAPAELVRALQSLYTL-----EPAVDVILLVRGGGSIEDLWAFNDETLARTIVQSPVPV 266

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +S +GHETD+T+AD+ ADLRAPTPT AAE+    ++    +L  L  RL + +   +   
Sbjct: 267 VSGVGHETDFTIADFCADLRAPTPTAAAELVSAPRDQWLGALDLLNERLGDALGTRLDVL 326

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L+     L      ++  + RL    + L   +     R  +    I   + + F  
Sbjct: 327 GQRLDQAAGRLGRPSNLVARQQLRLAHHAQRLHFAVLSRQERLAQVPRSIAADLPAKF-D 385

Query: 364 HNIQKNRQHILEKQQHIEQI 383
             + + R+ +      +  +
Sbjct: 386 RALVQRRERLERVALRLRLL 405



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 3/131 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE---QTKNRIFYLHTHIKKLITRIE 428
            +    Q ++Q   +  R   L  ++++ + H  +       +R   L    + +   + 
Sbjct: 322 RLDVLGQRLDQAAGRLGRPSNLVARQQLRLAHHAQRLHFAVLSRQERLAQVPRSIAADLP 381

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 +      +      L+       L+RGY  + D +   +   + L     ++  
Sbjct: 382 AKFDRALVQRRERLERVALRLRLLDPALVLQRGYAWLTDADGRAVVSAKKLHAGDAVVAR 441

Query: 489 FFDGQANAIVI 499
             DG+ +  V 
Sbjct: 442 LADGEVDLTVT 452


>gi|116511676|ref|YP_808892.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116107330|gb|ABJ72470.1| Exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 422

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 199/351 (56%), Gaps = 14/351 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   E +  L  V + GEIS +R   +  H YF+LKD  + I A +W G 
Sbjct: 10  LSVSTLTKYLKAKFERDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 67

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  EEG++ L IG+I+ +P S  Y I IESL+P G G L    E+ KKKL  EGL
Sbjct: 68  FRKLDFELEEGMKVLAIGRISIYPPSGSYSINIESLVPDGVGALALKFEQLKKKLAAEGL 127

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K  +P   K IAV TSP+GAVIRDI+  +  RFP+ +++++P KVQG    +EI+
Sbjct: 128 FDQRWKQNLPQFSKKIAVATSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGAGAAEEIS 187

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 188 GNIRRANER------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 241

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  +    +     E+RL N +  LIK +   L  L
Sbjct: 242 DVTLADFVADSRAATPTTAAELATPNTKIDLINWANEQESRLFNRLTHLIKIRRERLEKL 301

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++       +LDRL   L    E  +      +    NR+  
Sbjct: 302 SQSVVFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHRYELSANRLIP 352


>gi|125624489|ref|YP_001032972.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|158512800|sp|A2RLU4|EX7L_LACLM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|124493297|emb|CAL98266.1| exodeoxyribonuclease VII, large subunit [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300071278|gb|ADJ60678.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 417

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 200/351 (56%), Gaps = 14/351 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   E +  L  V + GEIS +R   +  H YF+LKD  + I A +W G 
Sbjct: 5   LSVSTLTKYLKAKFERDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  EEG++ L IG+I+ +P S  Y I IESL+P G G L    E+ KKKL  EGL
Sbjct: 63  FRKLDFELEEGMKVLAIGRISIYPPSGSYSINIESLVPDGVGALALKFEQLKKKLAAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K  +P   K IAV+TSP+GAVIRDI+  +  RFP+ +++++P KVQG    +EI+
Sbjct: 123 FDQRWKQNLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGAGAAEEIS 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 GNIRRANER------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  +    +     E+RL N +  LIK +   L  L
Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKIDLINWANEQESRLFNRLTHLIKIRRERLEKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++       +LDRL   L    E  +      +    NR+  
Sbjct: 297 SQSVVFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHRYELSANRLIP 347



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 2/140 (1%)

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L H I+  R+ + +  Q +  + +Q  R      ++   +   L   T+N++  +   
Sbjct: 280 NRLTHLIKIRRERLEKLSQSV--VFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHR 337

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            +    R+    S  ++S         + L          RG++ I D N   I    ++
Sbjct: 338 YELSANRLIPTYSKIVESKKNKTEQLYQSLLLLDISKIKARGFSLITDENGKIIKSVSDV 397

Query: 480 ATKTRILINFFDGQANAIVI 499
                + +   DGQ    V 
Sbjct: 398 KKGQALDVELTDGQVKVEVK 417


>gi|303233673|ref|ZP_07320327.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna BVS033A4]
 gi|302495107|gb|EFL54859.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna BVS033A4]
          Length = 444

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 134/492 (27%), Positives = 222/492 (45%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV E+S ++++ +  +  LS+V V GEIS +   + SGH YF LKD  + I  +I+K 
Sbjct: 3   VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
                    ++G +  + G ITT+ GSS YQ++++    SG+G L     + K+KL +EG
Sbjct: 62  MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
            FS+  K  I   PK I VITS TGA + DI + I  R+P+  ++I+   VQG++  + I
Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  ++           D +I+ RGGGS EDL  +NDE +++ I N+  PIISA+GHE
Sbjct: 182 IEGIKYMDEQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D+ ADLRA TPT AAE+A      L+  L    A++N I+ R  + +   L   
Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFGELKIYLQESYAKINRILSRRFEDENQELEYY 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K L                         + II     +   +   +K        +  +
Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +++++K      I                    +   +    +      + K+   +   
Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSMEIDKLNKIRITMIKN 369

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L   I      +      L        L++GY  +   ++  I+   ++     I++   
Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSAILEKGYAKVL-KDDKNISSVEDVKKNDNIILIMK 428

Query: 491 DGQANAIVINKA 502
           DG+ + +V NK 
Sbjct: 429 DGKLDTLVQNKE 440


>gi|309792224|ref|ZP_07686696.1| exodeoxyribonuclease VII, large subunit [Oscillochloris trichoides
           DG6]
 gi|308225765|gb|EFO79521.1| exodeoxyribonuclease VII, large subunit [Oscillochloris trichoides
           DG6]
          Length = 401

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
             V++L+ +L+ ++E++  + ++ V GEIS +R    SGH YF+LKD  + +  ++W+  
Sbjct: 4   LGVAQLNSYLRELLEADEIVRNIWVVGEISEFRRYP-SGHCYFTLKDEGATLRGVMWRTF 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            ++   LP  G   L  GK++ +    + Q+++++++P+G G L    E+ K++L  EGL
Sbjct: 63  ADRHPSLPRVGDAVLAHGKVSIYESRGELQLVVDTIMPAGVGLLNARFEELKQRLAAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+ + K P+P +P+ I ++TSP  A ++D+L  +  RFPL  V+I P  VQG+  P  I 
Sbjct: 123 FNPERKRPLPDLPRRIGIVTSPQAAALQDMLNILRRRFPLTEVVIAPCLVQGERAPDSIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+  +            D+IILARGGGSIEDLW FNDE + RA+  S +P+I+ +GHET
Sbjct: 183 EALYAIYQ-------TEVDLIILARGGGSIEDLWCFNDEAVARAVFASPVPLITGVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+ D+ ADLRAPTP+ AAE+AVP    L   +  + +RL+  +    +          
Sbjct: 236 DTTIVDFVADLRAPTPSAAAELAVPAMSMLGDQIAYMRSRLHMGVALQPRRAQCERLIQR 295

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L    + ++  R +LD L R L   +         H   +  ++++      + +
Sbjct: 296 MNLVAPLRRVAQDRQQLDDLARRLTARMTRSTALHQSHLRGLQAQLRALSPYATLMR 352



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 3/127 (2%)

Query: 385 KQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
           + H+      ++ +   L           R+      +  L  R+   ++       + +
Sbjct: 275 RLHMGVALQPRRAQCERLIQRMNLVAPLRRVAQDRQQLDDLARRLTARMTRSTALHQSHL 334

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINK 501
                 L++ +   TL RGY  ++   + + +T    +     ++I    G  +A V+  
Sbjct: 335 RGLQAQLRALSPYATLMRGYALVRRASDGHLLTHPDQVLPGDTLIITTRAGDLHAQVVPP 394

Query: 502 APPKEQP 508
              +E+ 
Sbjct: 395 TDQEERR 401


>gi|328948045|ref|YP_004365382.1| exodeoxyribonuclease 7 large subunit [Treponema succinifaciens DSM
           2489]
 gi|328448369|gb|AEB14085.1| Exodeoxyribonuclease 7 large subunit [Treponema succinifaciens DSM
           2489]
          Length = 402

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 129/357 (36%), Positives = 201/357 (56%), Gaps = 10/357 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            +VS+L+  +K ++ES+  ++ ++GEIS Y+   SSGH YFSLKD+ S+I A++++G  +
Sbjct: 11  LTVSQLTELIKTMLESSFQNIILKGEISNYK-PSSSGHLYFSLKDSDSQISAVMFRGAAS 69

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F+P++G+   V GKIT +     YQI + S+I +G+G ++  +E RK+KL  EGLF 
Sbjct: 70  ALNFIPKDGMLVQVRGKITVYGPRGNYQIQVSSMIEAGAGNIMEMIEMRKRKLAAEGLFD 129

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
              K  +PF PK + V+TSP GA +RDIL     R   + VI+FP  VQG+     I   
Sbjct: 130 SARKRTVPFFPKTVGVVTSPNGAALRDILNIRRRRNDKVSVIVFPAIVQGENAADTIEYM 189

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N           D++I+ RGGGS+EDL  F++E +VRAIA S IP+ISA+GHE DW
Sbjct: 190 IKVAN------EYNMCDVLIVGRGGGSLEDLLPFSEEKVVRAIAKSKIPVISAVGHEIDW 243

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NTLNSLL 311
            L+D+AAD+RAPTP+ AAE+A+P K  ++S++ N ++ L + I                 
Sbjct: 244 ALSDFAADVRAPTPSAAAEIAIPRKSDIESNIENFKSILFSEIQNKTNSLRLMLRNFDPE 303

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                          R D+    ++  +E II  K       +  +++    +   +
Sbjct: 304 NMQTRLQNIEQKYSERFDKAFDSMKDAIENIIKDKRIKIKLCLQNLENCNPQNIFDR 360



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 5/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV-----KQHLRYIFLEKKEK 398
                  +     +++       +       + + +IE        +   +   L    +
Sbjct: 239 HEIDWALSDFAADVRAPTPSAAAEIAIPRKSDIESNIENFKSILFSEIQNKTNSLRLMLR 298

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                 ++ + +N          K    ++  + + IK     + +  + L++   +N  
Sbjct: 299 NFDPENMQTRLQNIEQKYSERFDKAFDSMKDAIENIIKDKRIKIKLCLQNLENCNPQNIF 358

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            RGY+ + D N   I +   L+   +I I   +G   A V    
Sbjct: 359 DRGYSMVCDENGKIIRKSSELSNGAKIKIKPAEGLIFATVDKTN 402


>gi|224418363|ref|ZP_03656369.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT
           98-5491]
 gi|253827682|ref|ZP_04870567.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT
           98-5491]
 gi|313141893|ref|ZP_07804086.1| exodeoxyribonuclease VII [Helicobacter canadensis MIT 98-5491]
 gi|253511088|gb|EES89747.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT
           98-5491]
 gi|313130924|gb|EFR48541.1| exodeoxyribonuclease VII [Helicobacter canadensis MIT 98-5491]
          Length = 416

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 128/489 (26%), Positives = 224/489 (45%), Gaps = 80/489 (16%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+  +K ++E+    V V GE+S     HSSGH YFSLKD  S +  ++++G   
Sbjct: 4   LSVSELNSQIKGLLEATFLQVSVCGEVSNCT-YHSSGHIYFSLKDKDSTLKCVMFRGNAR 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F  E+G++ ++ G IT F    +YQ+   S IPSG G L  A E+ KK+  ++G F 
Sbjct: 63  YLKFKIEDGMDLILNGGITLFIPRGEYQLNCLSAIPSGVGELTLAYEQLKKEYEKKGYFL 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           ++    +P  PK + +ITS +GAV+ D+L+    R+  +  I+F   VQG+   + IA  
Sbjct: 123 NKKP--LPKFPKRVGLITSKSGAVLHDMLRVAQKRWNLVEFILFDTLVQGEGAKENIAKN 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   ++L         D +ILARGGGS+EDLW FN+ +++ AI  +  PI+SAIGHE D 
Sbjct: 181 IQMADSL-------NLDCLILARGGGSLEDLWAFNEPLVIEAIFLAKTPIVSAIGHEPDV 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D+ ADLRAPTP+ A E+ +P K                                   
Sbjct: 234 VLSDFVADLRAPTPSAAMEILLPDKIEWLM------------------------------ 263

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                        RLD + + +E+ ++ ++ +K +   ++   ++ +     I+ ++Q +
Sbjct: 264 -------------RLDSMQKTMENKIQNLLEKKNKKLEYLEVLLQKNSFFEKIKNHKQQL 310

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           L  Q+ + Q                           +++I      ++     +E  ++ 
Sbjct: 311 LTLQKFLTQA-------------------------IESKIIPHRYTLESTPLILEQKITK 345

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            + +    +++    L+S   +N  K GY          + +   +     + +      
Sbjct: 346 ILANKINQIALLKAKLESKNPQNNQKTGYVYA-SFQGKPVLKLSEITPNCLLTLEDLSAS 404

Query: 494 ANAIVINKA 502
               V++K 
Sbjct: 405 VQVQVLDKK 413


>gi|168206124|ref|ZP_02632129.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens E
           str. JGS1987]
 gi|170662425|gb|EDT15108.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens E
           str. JGS1987]
          Length = 400

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRVLPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  + R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLVNKKEFLHRAVDRRFLNAKKD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPTHIIEKRIKEVNTLEEKLNFLGKRKIDKAKDELITLNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKEDK 368



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+    ++ K++ + + V +  R++  +K   +    +      + I      +  L  
Sbjct: 265 LQEMINDLVNKKEFLHRAVDR--RFLNAKKDVDLLHKGLKGNNPTHIIEKRIKEVNTLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L     +
Sbjct: 323 KLNFLGKRKIDKAKDELITLNSILQTLNPLNTLGRGYSVIMDKEDKVINEVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|18310804|ref|NP_562738.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens
           str. 13]
 gi|22095663|sp|Q8XJD8|EX7L_CLOPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|18145485|dbj|BAB81528.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens
           str. 13]
          Length = 400

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  + R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAVDRRFLNAKRD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPTHIIEKRIKEVNTLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKEDK 368



 Score = 96.0 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+    +L K++ + + V +  R++  ++   +    +      + I      +  L  
Sbjct: 265 LQEMINDLLNKKEFLHRAVDR--RFLNAKRDVDLLHKGLKGNNPTHIIEKRIKEVNTLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L     +
Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|145219220|ref|YP_001129929.1| exodeoxyribonuclease VII large subunit [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205384|gb|ABP36427.1| Exodeoxyribonuclease VII large subunit [Chlorobium phaeovibrioides
           DSM 265]
          Length = 402

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 130/362 (35%), Positives = 191/362 (52%), Gaps = 6/362 (1%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SVSEL+  +K  +E     + V+GEIS ++  HSSGH Y +LKD  ++I A+IW
Sbjct: 1   MAASILSVSELTQQIKQELEILFPKIQVKGEISNFKH-HSSGHIYMTLKDEGAQIPAVIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K   +++   P +G+  +  G+I  +P S +YQ I  S+   G G L  A  K  +KL  
Sbjct: 60  KHAASRLTCRPADGMNVIAEGRIEVYPPSGRYQFICTSITQEGEGALQQAFAKLLQKLAA 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G FSD+ K PIP IP+ I ++TSPTGAVI D+ + +  RFP   ++++P KVQG +   
Sbjct: 120 AGWFSDERKKPIPKIPQTIGLVTSPTGAVIEDMGKVLQRRFPPATILLYPAKVQGRDAVD 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            + + I   N   +     RPD+II+ARGGGS+EDL  FN+E +  AI NS IPIISA+G
Sbjct: 180 SLISGISWFNA--QTSGQNRPDVIIVARGGGSLEDLQAFNEERVAEAIFNSPIPIISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD  ADLRA TP+ AAE+AVP    L   + +L A   +++   I      ++
Sbjct: 238 HETDFTIADMVADLRAGTPSIAAELAVPDSLELLRHITSLGATRESLLKAKIDGAEREID 297

Query: 309 --SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                 A       +      LD     +   LE                +        +
Sbjct: 298 SLCSSYAFNRPVLQMQQLSEELDSTVERMARTLEGKQRETGMRLEAAARHLGLLDYRKTL 357

Query: 367 QK 368
           ++
Sbjct: 358 ER 359



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 81/243 (33%), Gaps = 7/243 (2%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
             A  +  P K   + ++ +L + ++    +        +  + +   + +   + +  R
Sbjct: 161 PPATILLYPAKVQGRDAVDSLISGISWFNAQTSGQNRPDVIIVARGGGSLEDLQAFNEER 220

Query: 328 LDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +          +   +          ++  +++       +      LE  +HI  +   
Sbjct: 221 VAEAIFNSPIPIISAVGHETDFTIADMVADLRAGTPSIAAELAVPDSLELLRHITSLGAT 280

Query: 387 HLRYIFLE-----KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
               +  +     ++           +   ++  L   +   + R+   L  K +     
Sbjct: 281 RESLLKAKIDGAEREIDSLCSSYAFNRPVLQMQQLSEELDSTVERMARTLEGKQRETGMR 340

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +    R L    Y+ TL+RGYT ++    + +T  +NL  +  + + F DG   A + + 
Sbjct: 341 LEAAARHLGLLDYRKTLERGYTLVRRK-GHMVTSAKNLRPEETVELLFHDGTLPAEIRSG 399

Query: 502 APP 504
            P 
Sbjct: 400 TPS 402


>gi|225573685|ref|ZP_03782440.1| hypothetical protein RUMHYD_01881 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038978|gb|EEG49224.1| hypothetical protein RUMHYD_01881 [Blautia hydrogenotrophica DSM
           10507]
          Length = 406

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 13/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  YSV +++ ++K++   +   S + V+GE+S  +  H+SGH YFSLKD    I  +++
Sbjct: 2   NSIYSVGQVNNYIKNMFTQDFMLSRISVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F  + G + +V G +  +    KYQ+    +   G+G L       K++L E
Sbjct: 61  AGQRRGLGFAMKNGDKVVVSGSVNVYERDGKYQLYARQIQLEGAGLLYERFLALKRELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIP   + + V+T+PTGA I+DI      R P L++I++P  VQG    +
Sbjct: 121 MGMFAPEYKQPIPRFIRTLGVVTAPTGAAIQDIRNISYRRNPYLQIILYPALVQGAGAKE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L+ L         D++I+ RGGGSIEDLW FN+E + RAI   + P+ISA+G
Sbjct: 181 SIVKGIQTLDRL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECTTPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+ADY ADLRAPTP+ AAE+AV         L   E+RL   ++  +    + L 
Sbjct: 234 HETDVTIADYVADLRAPTPSAAAELAVDDYRGFLGQLAEYESRLERGLLGRLTLLKSRLE 293

Query: 309 SL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                    +  Q +   R  L  +  ++E+ ++  I            R+     +  +
Sbjct: 294 QYKIRMGFLSPRQQILERRQYLADIQEKIENGMKQKIKDSRHELQVYAQRLYGCSPLKKL 353

Query: 367 QK 368
            +
Sbjct: 354 TQ 355



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E +  +E+ +   L  +    ++    +  L    + +I     ++  +  +IE  +
Sbjct: 269 QLAEYESRLERGLLGRLTLLKSRLEQYKIRMGFL--SPRQQILERRQYLADIQEKIENGM 326

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             KIK     + +  + L   +    L +G++ + D N + I +   +     I I   D
Sbjct: 327 KQKIKDSRHELQVYAQRLYGCSPLKKLTQGFSFVTDENGHGIHRVEQVKPLDAIRIQVTD 386

Query: 492 GQANAIVINKAPPKEQP 508
           G+  A V   +    + 
Sbjct: 387 GEIQAQVTGSSLVDREK 403


>gi|326390204|ref|ZP_08211765.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993852|gb|EGD52283.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 401

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 13/407 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VSE++ ++K +++++  L +V VRGEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALNVSEITDYIKRMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEVASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +  G+IT +  S  YQ+ ++S+   G G L  A  K K+KL
Sbjct: 59  MFNEYSRLLNFTLQDGMSVIATGRITVYEKSGTYQLYVQSIQSEGIGALYLAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 EKEGLFDSDKKEPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA+  LN  ++       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ +L  ++   +  K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L +  +     R++++ L   L + +  I   K   F  +  ++ S   + 
Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +    +L+KQ+ +   VK    Y  ++   K      + ++ K 
Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%)

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +       +   L   ++ L   +   +    +       I    L S +    L RGYT
Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + D     I+  +++     I I F DG+A AIV    
Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398


>gi|291538769|emb|CBL11880.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis
           XB6B4]
          Length = 401

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 118/360 (32%), Positives = 198/360 (55%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++   +     + V+GE+S  +  H+SGH YF++KD    ++A+++ G
Sbjct: 5   VYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVMFAG 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +   ++F  +EG + +V G +  +    KYQI    +   G+G L    E  K++L E G
Sbjct: 64  SRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELEEMG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +F+ ++K PIP     I V+T+PTGA ++DI    + R P  ++I++P  VQGD   + I
Sbjct: 124 MFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAVESI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I  L+ L         D++I+ RGGGSIEDLW FN+E + RAI     P+ISA+GHE
Sbjct: 184 VNGIHALDAL-------GVDVVIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TDWT+AD+ ADLRAPTP+ AAE+AV     ++  L  ++ R+  + ++ I+     L   
Sbjct: 237 TDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKELEHA 296

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   + +  L   R     L  +L + +E +I  +      +  R++    +  + +
Sbjct: 297 KDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKKLAQ 356



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E ++ +  +  Q ++ +  E +     L  L    + ++     +   L  ++   +
Sbjct: 270 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 327

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            H I+     +++ +  L+  +    L +GY+ + D N + +T    +    R+ I    
Sbjct: 328 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHALTDAEGVKAGDRVKIRLLK 387

Query: 492 GQANAIVINK 501
           G   A V   
Sbjct: 388 GALEAEVTEV 397


>gi|239815625|ref|YP_002944535.1| exodeoxyribonuclease VII large subunit [Variovorax paradoxus S110]
 gi|239802202|gb|ACS19269.1| exodeoxyribonuclease VII, large subunit [Variovorax paradoxus S110]
          Length = 436

 Score =  287 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 8/384 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN      +     ++V  L   +   +++  + V VRGEISG+    SSGH YF+LKD+
Sbjct: 1   MNLRDSNPTPGPRIWAVGALCRAVADALDARFNPVAVRGEISGF-SRASSGHCYFALKDS 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             ++   +++     ++F P +G +  V G++  +      Q+++ESL  +G G L    
Sbjct: 60  SGQLRCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLQRAGQGALFEQF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
            +RK +L  EGLF  + K  +P +P+ + ++TS   A + D++  +  R P + V++ P 
Sbjct: 120 LQRKARLEAEGLFDPERKRALPVMPRAVGLVTSLGAAALHDVVTALRRRVPHIPVVLAPA 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG   P E+  A+  L  L      P  D+I+L RGGGSIEDLW FNDE + R I  S
Sbjct: 180 AVQGANAPAELVRALQSLYAL-----EPAVDVILLVRGGGSIEDLWAFNDEALARTIVQS 234

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P+I  +GHETD+T+AD+ ADLRAPTPT AAE+    +     ++  L+ RL++ +   
Sbjct: 235 PVPLICGVGHETDFTIADFCADLRAPTPTAAAELVSAPQAMWLGAIDLLDERLDSALGAR 294

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +      L+     L      ++  + RL    + L + L     R  +    I      
Sbjct: 295 LDVLGQRLDQAAARLGRPSGLVARQQLRLAHHSQRLRYALLSRAERLAQVPRAIAAD-FP 353

Query: 360 DFLIHNIQKNRQHILEKQQHIEQI 383
             L   + + R+ +      +  +
Sbjct: 354 LRLERAMAQRRERLERVALRLRLL 377



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 5/151 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   +    Q + +    + +      R           + + L  + +          
Sbjct: 290 ALGARLDVLGQRLDQAAARLGRPSGLVARQQLRLAHHSQRLRYALLSRAERLAQVPRAIA 349

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                R+E  +          +      L+       L+RGY  + D +   I   + L+
Sbjct: 350 ADFPLRLERAM----AQRRERLERVALRLRLLDPALVLQRGYAWLTDPDGRAIVSAKKLS 405

Query: 481 TKTRILINFFDGQAN-AIVINKAPPKEQPTK 510
               ++    DG  + A+V  K   +  P  
Sbjct: 406 PGDAVVARLADGSVDLAVVPGKTGTRPTPGA 436


>gi|307265162|ref|ZP_07546721.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919784|gb|EFN49999.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 401

 Score =  287 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 13/407 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VSE++ ++K +++++  L +V VRGEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALNVSEITDYIKRMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEVASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +  G+IT +  S  YQ+ ++S+   G G L  A  K K+KL
Sbjct: 59  MFNEYSRLLNFTLQDGMSVIATGRITVYEKSGTYQLYVQSIQSEGIGALYLAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 EKEGLFDSDKKEPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA+  LN  ++       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ +L  ++   +  K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L +  +     R++++ L   L + +  I   K   F  +  ++ S   + 
Sbjct: 293 FEGLNRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +    +L+KQ+ +   VK    Y  ++   K      + ++ K 
Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%)

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +       +   L   ++ L   +   +    +       I    L S +    L RGYT
Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + D     I+  +++     I I F DG+A AIV    
Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398


>gi|326406401|gb|ADZ63472.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           lactis CV56]
          Length = 417

 Score =  287 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 140/351 (39%), Positives = 199/351 (56%), Gaps = 14/351 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + GEIS +R   +  H YF+LKD  + I A +W G 
Sbjct: 5   LSVSTLTKYLKAKFDRDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  EEG++ L +G+I+ +P S  Y I IESL+P G G L    E+ KKKL  EGL
Sbjct: 63  FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K  +P   K IAV+TSP+GAVIRDI+  +  RFP+ +++++P KVQG    +EIA
Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  +    +     E RL N +  +IK +   ++ L
Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWANEQEKRLFNRLTHVIKIRRERVDKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++       +LDRL   L    E  +      +     ++  
Sbjct: 297 SQSVVFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%)

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L H I+  R+ + +  Q +  + +Q  R      ++   +   L   T+N++  +   
Sbjct: 280 NRLTHVIKIRRERVDKLSQSV--VFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHR 337

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            +    ++       +++         + L          RG++ + D     I    ++
Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397

Query: 480 ATKTRILINFFDGQANAIVI 499
                + +   DG+    V 
Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417


>gi|114566117|ref|YP_753271.1| exodeoxyribonuclease VII [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318783|sp|Q0AZF4|EX7L_SYNWW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|114337052|gb|ABI67900.1| Exodeoxyribonuclease VII large subunit [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 405

 Score =  287 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 131/405 (32%), Positives = 214/405 (52%), Gaps = 13/405 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +V+EL+ ++ ++++S+  L  + +RGEISG+R    SGH YF+LKD  S I A+++K 
Sbjct: 4   ILTVTELNSYIANLLDSDPFLGQLWLRGEISGFRLYQQSGHMYFTLKDEDSTISAVMFKS 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               ++F P++G+E L+   ++ F    KYQ+ +E + P G G L   LE+ KKKL  +G
Sbjct: 64  RARGLKFKPKDGMEVLLRASVSVFARQGKYQLYVEEMQPYGIGGLFLYLEELKKKLAAKG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F+ + K  IP   + + ++TS  GA +RDI + +  R P + V++    VQG E P E+
Sbjct: 124 YFAPERKKAIPAFVQRVGIVTSQDGAALRDICRILKQRHPGVEVVLAHSSVQGSEAPGEL 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A  +  LN+  E       ++II+ RGGGS EDL  FN E++V+AI  S+IP+ISA+GHE
Sbjct: 184 AEGLRLLNSYAE------VELIIIGRGGGSYEDLMAFNSELVVQAIYESNIPVISAVGHE 237

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLN 308
            D+TLAD  ADLRA TP+ AA +AV   + L   L N + RL   + R      +I    
Sbjct: 238 VDFTLADLVADLRAATPSQAASLAVADMQALSRQLDNYQQRLLRAMQRKLLYYTEIIDRL 297

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +        L      L +L + L   +  I   K    +  +  + S   +  +++
Sbjct: 298 MMKRIWKQPRSLLHMREELLSQLEKSLSRGMAEIFREKKMKLSMNMAALDSLSPLKIMER 357

Query: 369 NRQHILEKQQ--HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
               + ++ +    EQ V+   R     +   + I  + +E+ K 
Sbjct: 358 GYVLLQKEGRIIRDEQQVQIGDRLEVAMRHADLEIEVIKKERVKR 402



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 52/141 (36%), Gaps = 3/141 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q   + +   QQ + + +++ L Y        +  +  + +Q ++ +      + +L  
Sbjct: 265 MQALSRQLDNYQQRLLRAMQRKLLYYTEIIDRLM--MKRIWKQPRSLLHMREELLSQLEK 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +   ++   +     +S+    L S +    ++RGY  +Q      I  ++ +    R+
Sbjct: 323 SLSRGMAEIFREKKMKLSMNMAALDSLSPLKIMERGYVLLQ-KEGRIIRDEQQVQIGDRL 381

Query: 486 LINFFDGQANAIVINKAPPKE 506
            +          VI K   K 
Sbjct: 382 EVAMRHADLEIEVIKKERVKR 402


>gi|268678922|ref|YP_003303353.1| exodeoxyribonuclease VII large subunit [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616953|gb|ACZ11318.1| exodeoxyribonuclease VII, large subunit [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 417

 Score =  287 bits (733), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 120/385 (31%), Positives = 192/385 (49%), Gaps = 16/385 (4%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS L+  +K ++E+   HV V GE+S     HSSGH YF+LKD  S I  +++KG   
Sbjct: 5   LSVSTLNNQVKSLLEATFLHVSVEGEVS-RPTYHSSGHLYFTLKDADSSISCVMFKGNTK 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F  EEG+  +V G I+ F     YQI   S+ PSGSG L  A E+ K KL  +G F 
Sbjct: 64  SLKFQVEEGLSVVVHGSISVFSPRGTYQINCTSMEPSGSGALALAYEQLKAKLGAKGYFE 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K P+P     IA++TS TGA ++D+L+  + R+P +++ +    VQG+     IA+ 
Sbjct: 124 AGRKKPLPRFVNHIALVTSGTGAALQDMLRVATKRWPLVKITLIDTLVQGEGAKFAIASN 183

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I + +TL         D+II+ RGGGS+EDLW FN+E++  AI     P++S++GHE D+
Sbjct: 184 IARADTL-------GVDVIIVGRGGGSVEDLWAFNEEVVADAIFTCKTPVVSSVGHEIDY 236

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD+RAPTP+ A EM +P    +   L ++  + + +  RL+  K          
Sbjct: 237 VISDFVADMRAPTPSAAMEMILPDSTEMLQRLDSMMEQSHLLFRRLLHSKEEQ------- 289

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L    +  +           + E               H     +   L+  +    +  
Sbjct: 290 LEQLKRLFAKRSIDEKLALMKGEIAFVERQLNDKMLLMHREKSAQVALLLEQMSFQTKQN 349

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEK 398
           L K++ +       L      +++K
Sbjct: 350 LAKKEQLLSSYTLALHSKEPSREQK 374


>gi|169824539|ref|YP_001692150.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC
           29328]
 gi|167831344|dbj|BAG08260.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC
           29328]
          Length = 444

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 136/492 (27%), Positives = 225/492 (45%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV E+S ++++ +  +  LS+V V GEIS +   + SGH YF LKD+ + I  +I+K 
Sbjct: 3   VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDDKALISCMIFKT 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
                    ++G +  + G ITT+ GSS YQ++++    SG+G L     + K+KL +EG
Sbjct: 62  MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
            FS+  K  I   PK I VITS TGA + DI + I  R+P+  ++I+   VQG++  + I
Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  ++           D +I+ RGGGS EDL  +NDE +++AI N+  PIISA+GHE
Sbjct: 182 IEGIKYMDDQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKAIYNAKTPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D+ ADLRA TPT AAE+A    E L+  L    A++N I+ R  + +   L   
Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFEELKIYLQESYAKINRILSRRFEDENQELEYY 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K L                         + II     +   +   +K        +  +
Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +++++K      I                    +   +    +      + K+   +   
Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSLEIDKLNKVRITMIKN 369

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L   I      +      L        L++GY  +   ++  I+   ++     I++   
Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSTILEKGYAKVL-KDDKNISSVDDVKKNDNIILIMK 428

Query: 491 DGQANAIVINKA 502
           DG+ + +V NK 
Sbjct: 429 DGKLDTLVQNKE 440


>gi|291536361|emb|CBL09473.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis
           M50/1]
          Length = 401

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 118/360 (32%), Positives = 198/360 (55%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++   +     + V+GE+S  +  H+SGH YF++KD    ++A+++ G
Sbjct: 5   VYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVMFAG 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +   ++F  +EG + +V G +  +    KYQI    +   G+G L    E  K++L E G
Sbjct: 64  SRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELEEMG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +F+ ++K PIP     I V+T+PTGA ++DI    + R P  ++I++P  VQGD   + I
Sbjct: 124 MFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAVESI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I  L+ L         D++I+ RGGGSIEDLW FN+E + RAI     P+ISA+GHE
Sbjct: 184 VNGIHALDAL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TDWT+AD+ ADLRAPTP+ AAE+AV     ++  L  ++ R+  + ++ I+     L   
Sbjct: 237 TDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKELEHA 296

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   + +  L   R     L  +L + +E +I  +      +  R++    +  + +
Sbjct: 297 KDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKKLAQ 356



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E ++ +  +  Q ++ +  E +     L  L    + ++     +   L  ++   +
Sbjct: 270 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 327

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            H I+     +++ +  L+  +    L +GY+ + D N + +T    +    R+ I    
Sbjct: 328 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHTLTDAEGVKAGDRVKIRLLK 387

Query: 492 GQANAIVINK 501
           G   A V   
Sbjct: 388 GALEAEVTEV 397


>gi|291550247|emb|CBL26509.1| exodeoxyribonuclease VII, large subunit [Ruminococcus torques
           L2-14]
          Length = 410

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 122/371 (32%), Positives = 200/371 (53%), Gaps = 13/371 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    I  +++ G
Sbjct: 4   VYTVKQVNSYIKNMFTQDFMLNRIYVKGEVSNLK-YHTSGHIYFSLKDESGTIACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           + + + F  EEG + +V+G ++ +    KYQ+    +I  G+G L    E  KK+L E G
Sbjct: 63  SRSGLSFHMEEGQQVVVLGAVSVYERDGKYQLYAREIILDGAGLLYERFEALKKELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +F+ ++K P+P   + I V+T+PTGA IRDI+     R P  +++++P  VQGD     I
Sbjct: 123 MFAAEYKQPVPRYARTIGVVTAPTGAAIRDIINVAKRRNPFVQILLYPALVQGDGAVSSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L          + D++I+ RGGGSIEDLW FN+E + RAI +  +P+ISA+GHE
Sbjct: 183 VKGIRML-------EEKQVDVMIVGRGGGSIEDLWAFNEEAVARAIFDCRVPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV     ++  ++N E+ L   I + +  +   L   
Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYSEVKEQILNCESLLRRAINQKLLNERVHLEHS 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  Q L+  R R       L   +E  + ++         R+K    +  + +
Sbjct: 296 RLKLQTLHPRQKLNEKRQRTVDAENTLRSLMERHLTKEKHRLALCAERMKGLSPLEKLSQ 355

Query: 369 NRQHILEKQQH 379
              ++   Q  
Sbjct: 356 GYSYVCNAQGQ 366



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 12/143 (8%), Positives = 48/143 (33%), Gaps = 2/143 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++ IL  +  + + +  + + +      + + L +     + ++             +  
Sbjct: 267 KEQILNCESLLRRAI--NQKLLNERVHLEHSRLKLQTLHPRQKLNEKRQRTVDAENTLRS 324

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           ++   +      +++    ++  +    L +GY+ + +     I +   +     + I  
Sbjct: 325 LMERHLTKEKHRLALCAERMKGLSPLEKLSQGYSYVCNAQGQNIKKTDQVREGDLLQIYV 384

Query: 490 FDGQANAIVINKAPPKEQPTKKC 512
            DGQ    V +    + +  +  
Sbjct: 385 TDGQIETYVTDTVKLEGERGQSS 407


>gi|167901600|ref|ZP_02488805.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           NCTC 13177]
          Length = 335

 Score =  286 bits (732), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 177/318 (55%), Gaps = 8/318 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDRLP 332
            +  + L      + +L 
Sbjct: 314 ISPAERLQRQAMHVGQLA 331


>gi|110800889|ref|YP_696505.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens
           ATCC 13124]
 gi|168210815|ref|ZP_02636440.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens B
           str. ATCC 3626]
 gi|182625649|ref|ZP_02953418.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens D
           str. JGS1721]
 gi|123148642|sp|Q0TPD5|EX7L_CLOP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110675536|gb|ABG84523.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           ATCC 13124]
 gi|170711159|gb|EDT23341.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens B
           str. ATCC 3626]
 gi|177909051|gb|EDT71526.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens D
           str. JGS1721]
          Length = 400

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 119/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWTFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  I R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAIDRKFLNAKKD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKKDK 368



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+    +L K++ + + + +  +++  +K   +    +     K+ I      +  L  
Sbjct: 265 LQEMINDLLNKKEFLHRAIDR--KFLNAKKDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L     +
Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKKDKVINEVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|307720627|ref|YP_003891767.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978720|gb|ADN08755.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas autotrophica
           DSM 16294]
          Length = 417

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 121/370 (32%), Positives = 199/370 (53%), Gaps = 12/370 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS L+  +K ++ES    V V GE+S     H+SGH YF+LKD+ S I A++++G  +
Sbjct: 4   LSVSALNEQIKTVLESTFERVFVEGELSRITF-HNSGHIYFTLKDSSSAISAVMFRGNAS 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K+ F  EEG++ ++ G IT +     YQI   S+ P+G G L  A E+ K+KL  +  F+
Sbjct: 63  KLRFRLEEGMKVIIDGTITLYKPRGSYQINCFSIEPAGQGALALAYEQLKQKLSAQDYFN 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K  +P  P   A+ITS TGA ++D+L+  + R+  L + ++ V VQG+     IANA
Sbjct: 123 PERKKELPKFPSRTALITSGTGAALQDMLRVANSRYRLLEIDVYDVLVQGEGAAFSIANA 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   ++          DII++ RGGGSIEDLW FN+E++  AI ++  P++SA+GHE DW
Sbjct: 183 LKIADSR-------EYDIIVIGRGGGSIEDLWAFNEEIVADAIFHAKTPVVSAVGHEIDW 235

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ ADLRAPTP+ A EM +P    L   L +L  +L+  +   I      L  +  +
Sbjct: 236 VISDFVADLRAPTPSAAMEMILPDTNELYQYLDSLSTQLSQKLHHKIYNLSQELLHVKNS 295

Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                 ++ L  +   + +L  +    +   +    +  + +  R     +   I   + 
Sbjct: 296 YIQHSVEKKLQFNLNEIKKLKEDFAQTIAFRLQNYKKDVDSLQQR-FPQTIESIINIAQN 354

Query: 372 HILEKQQHIE 381
            +L  Q+ +E
Sbjct: 355 QLLNLQKMLE 364


>gi|257439491|ref|ZP_05615246.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium
           prausnitzii A2-165]
 gi|257198063|gb|EEU96347.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium
           prausnitzii A2-165]
          Length = 407

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 128/370 (34%), Positives = 199/370 (53%), Gaps = 11/370 (2%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS L+ ++K++++    L  + +RGEI+ +     SGH YFSL+D  + + A++++   
Sbjct: 6   SVSALNRYVKNLLDVNDVLFDLALRGEIANFVQNARSGHCYFSLRDEAASVRAVMFRSDA 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PEEG++ +V  ++T +     +Q+ +  + P G G+   A E+ K KL +EGLF
Sbjct: 66  RRLGFQPEEGMKVVVRCRVTLYERDGAFQVYVNDMFPDGIGSTQLAFEQLKAKLDKEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + +HK P+P  P+ I ++TS TGA ++DI   I  R+P +R+++ PV VQG E  +EIA+
Sbjct: 126 APEHKKPLPRFPQCIGLVTSKTGAALQDIRNVIGRRWPAVRLLLAPVNVQGFEAAEEIAD 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI +L+           D II+ARGGGS EDLW FN E+I RA      P+ISAIGHE D
Sbjct: 186 AITRLDK------SGLVDEIIVARGGGSREDLWVFNAEVIARAAYRCKTPLISAIGHEID 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ AD RAPTP+ AAE+AVP +      L  LE  ++N I   +    N L    +
Sbjct: 240 FTILDFVADQRAPTPSAAAELAVPDRAEQGRKLCTLEENIHNCIQFKLSLCYNRLEQTEQ 299

Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L  +     L     RLD L   L+      +        H      S      + +  
Sbjct: 300 LLSRAGVQAALEERAARLDTLAGRLQTAARGKLQAGELRLKHTAALAASLNPYGVLARGY 359

Query: 371 QHILEKQQHI 380
             + + +  I
Sbjct: 360 AMVQDNRGRI 369



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  + +   +++I   ++  L   +   ++   +L   R   +  +      +  L  R
Sbjct: 266 AEQGRKLCTLEENIHNCIQFKLSLCYNRLEQTEQLLS--RAGVQAALEERAARLDTLAGR 323

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++     K+++    +  T  +  S      L RGY  +QD     I     L       
Sbjct: 324 LQTAARGKLQAGELRLKHTAALAASLNPYGVLARGYAMVQDNRGR-ICTPDALRPGQTCK 382

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   + +    V       E   K
Sbjct: 383 LRGTEHRVTCTVNTVEELDESTQK 406


>gi|167569041|ref|ZP_02361915.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis
           C6786]
          Length = 326

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 111/311 (35%), Positives = 177/311 (56%), Gaps = 8/311 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  +S R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 EAANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASEVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L +    L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELNDRRNALARGLRRGLDLRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSR 325
            +  + L    
Sbjct: 314 ISPAERLQRQS 324


>gi|147677517|ref|YP_001211732.1| exonuclease VII, large subunit [Pelotomaculum thermopropionicum SI]
 gi|146273614|dbj|BAF59363.1| exonuclease VII, large subunit [Pelotomaculum thermopropionicum SI]
          Length = 399

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 131/362 (36%), Positives = 209/362 (57%), Gaps = 13/362 (3%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             +SV EL+ ++K ++E +  L++V V+GEIS ++    SGH YF+LKD+ S +  ++++
Sbjct: 2   KVFSVKELTRYIKSLIEKDVLLANVWVKGEISNFKA-AVSGHFYFTLKDDFSCLKVVMFR 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F PE G+   V G ++ F     YQ+  E + P G+G L  A E+ K++L +E
Sbjct: 61  SRSRLVPFRPENGMAVTVRGYVSVFERDGIYQLYAEEIEPDGTGALFLAFEQLKERLQQE 120

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189
           GLF  +HK P+P +P+ I ++TSP GA IRD+L+ I  R+    +I+ PV+VQG+  P  
Sbjct: 121 GLFDPKHKKPLPLLPRRIGIVTSPQGAAIRDMLEIIRRRWNGREIILVPVQVQGEAAPPA 180

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A  I  LN L         D+II+ RGGGSIE+LW FN E++ R+I +S IP+ISA+GH
Sbjct: 181 VARGIQLLNRL------GGVDLIIVGRGGGSIEELWAFNTEIVARSIFSSKIPVISAVGH 234

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+T++D+ AD RA TP+ AAEMAVP K  ++  +  L  RL   + + +      L +
Sbjct: 235 ETDFTISDFVADARAATPSAAAEMAVPDKREMERYIQTLRTRLARALEKRLGDDRRRLRA 294

Query: 310 L--LKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               +        L  +R + LD L R L   +  I+ R+      +  R+++   +  +
Sbjct: 295 CLESRVFVRPADVLCGARQQLLDFLYRRLSQAVRGIVEREEGRLAVLAGRLQALSPLATL 354

Query: 367 QK 368
            +
Sbjct: 355 AR 356



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FI 473
                +  L  R+   +   ++     +++    LQ+ +   TL RGY+     +    I
Sbjct: 311 ARQQLLDFLYRRLSQAVRGIVEREEGRLAVLAGRLQALSPLATLARGYSICTTPDGKRVI 370

Query: 474 TQKRNLATKTRILINFFDGQANAIVIN 500
               ++    R+ +    GQ + IV  
Sbjct: 371 NDSGSVEAGERLSVRLHRGQLSCIVEE 397


>gi|15672836|ref|NP_267010.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           lactis Il1403]
 gi|14194717|sp|Q9CH84|EX7L_LACLA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|12723782|gb|AAK04952.1|AE006320_1 exonuclease VII large subunit [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 417

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 140/351 (39%), Positives = 199/351 (56%), Gaps = 14/351 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + GEIS +R   +  H YF+LKD  + I A +W G 
Sbjct: 5   LSVSTLTKYLKAKFDRDRYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  EEG++ L +G+I+ +P S  Y I IESL+P G G L    E+ KKKL  EGL
Sbjct: 63  FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K  +P   K IAV+TSP+GAVIRDI+  +  RFP+ +++++P KVQG    +EIA
Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  +    +     E RL N +  +IK +   ++ L
Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWANEQEKRLFNRLTHVIKIRRERVDKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++       +LDRL   L    E  +      +     ++  
Sbjct: 297 SQSVVFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%)

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L H I+  R+ + +  Q +  + +Q  R      ++   +   L   T+N++  +   
Sbjct: 280 NRLTHVIKIRRERVDKLSQSV--VFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHR 337

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            +    ++       +++         + L          RG++ + D     I    ++
Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397

Query: 480 ATKTRILINFFDGQANAIVI 499
                + +   DG+    V 
Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417


>gi|255284122|ref|ZP_05348677.1| exodeoxyribonuclease VII, large subunit [Bryantella formatexigens
           DSM 14469]
 gi|255265296|gb|EET58501.1| exodeoxyribonuclease VII, large subunit [Bryantella formatexigens
           DSM 14469]
          Length = 412

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 193/369 (52%), Gaps = 13/369 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV +++ ++K++ + +     + V+GE+S  +  H+SGH YFSLKD    +  +++ G
Sbjct: 4   VYSVGQVNRYIKNMFQQDFMLKRIYVKGEVSNCK-YHTSGHIYFSLKDETGSMACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +   + F  ++G   + +G I+ +    KYQ+  E ++  G+G L    E  K++L E G
Sbjct: 63  SRGGLAFRLQDGQSVIALGSISVYERDGKYQLYAEEILLDGAGLLYEKFEALKRELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+ ++K P+P   + I ++T+PTGA IRDI      R P  ++I++P  VQG +    I
Sbjct: 123 MFAPEYKRPVPEFSQKIGIVTAPTGAAIRDIQNIAHRRNPGAQLILYPALVQGKDAAPSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+           D+II+ RGGGSIEDLW FN+E +  AI   + P+ISA+GHE
Sbjct: 183 VKGIETLDA-------CGVDVIIVGRGGGSIEDLWAFNEESVAYAIFRCNTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+ADY ADLRAPTP+ AAE+AV     + + +   + +L   +   +      L+  
Sbjct: 236 TDFTIADYVADLRAPTPSAAAELAVADISGILAQMERYQRQLARRMTDRLLDARARLSEA 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +    +   R  L     +L++ +  ++  K       I R +    +  +++
Sbjct: 296 SGKLAFLSPQNQIREQRQLLIEKEEKLQYRMANVLENKKHRMLIYIERFRGLSPLDKLKQ 355

Query: 369 NRQHILEKQ 377
               + +  
Sbjct: 356 GYSFVADAH 364



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 52/131 (39%), Gaps = 2/131 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +   Q+ + + +    R +    +   A   +     +N+I      + +   ++++ +
Sbjct: 269 QMERYQRQLARRMTD--RLLDARARLSEASGKLAFLSPQNQIREQRQLLIEKEEKLQYRM 326

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           ++ +++    + I     +  +  + LK+GY+ + D +   +T+         + I   D
Sbjct: 327 ANVLENKKHRMLIYIERFRGLSPLDKLKQGYSFVADAHGKTVTRTEQAQPGDMLTIYVTD 386

Query: 492 GQANAIVINKA 502
           G  +A V +  
Sbjct: 387 GCIHAQVKDTE 397


>gi|154483654|ref|ZP_02026102.1| hypothetical protein EUBVEN_01358 [Eubacterium ventriosum ATCC
           27560]
 gi|149735564|gb|EDM51450.1| hypothetical protein EUBVEN_01358 [Eubacterium ventriosum ATCC
           27560]
          Length = 403

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 117/360 (32%), Positives = 189/360 (52%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K +   +   +++ ++GE+S  +  H+SGH YF+LKD    I AI++ G
Sbjct: 4   IYTVGQVNNYIKRMFNQDFALNNIYIKGEVSNCK-YHTSGHIYFTLKDRTGVISAIMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + ++F  EEG + +V+G ++ +    KYQI  + +I  G+G L    E+ K +L E G
Sbjct: 63  NRSGLKFKMEEGQKVVVLGSVSVYERDGKYQIYAKEIILEGAGLLYQRFEQLKVELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF   +K PIP     I + T+ TGA I+DI+   + R P +++ ++P  VQG +  K+I
Sbjct: 123 LFDPMYKKPIPRYATRIGICTAQTGAAIQDIINITTRRNPYVQLYLYPCLVQGADAAKDI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            N I  L+++         D II+ RGGGSIEDLW FN++++  AI N + PIISA+GHE
Sbjct: 183 VNGIRCLDSM-------NLDTIIVGRGGGSIEDLWAFNEKIVAEAIFNCNTPIISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NTLN 308
           TD T+ADY +D RAPTP+ AAE+AV      ++ L N    L       I+         
Sbjct: 236 TDTTIADYVSDRRAPTPSAAAELAVFDYMEFENKLQNYRKMLTTYEKHFIEKYKLLTKNL 295

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                + +    L   +  +  L   L      I+  +         R+     ++ I K
Sbjct: 296 ENSIQMYSPKNMLLTRKQYISDLQMHLTDCFHTILDSRKHMLQIYAVRLNGLSPLNKISK 355



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 2/134 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIE 428
                K Q+  +++  + ++   + K     L    +    KN +     +I  L   + 
Sbjct: 264 MEFENKLQNYRKMLTTYEKHFIEKYKLLTKNLENSIQMYSPKNMLLTRKQYISDLQMHLT 323

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 + S    + I    L   +  N + +G+  + + +   I     L     I + 
Sbjct: 324 DCFHTILDSRKHMLQIYAVRLNGLSPLNKISKGFAYVANDSGESIKTVEQLKKGDNINLT 383

Query: 489 FFDGQANAIVINKA 502
             DG+  A V+   
Sbjct: 384 ISDGKIKASVLEVQ 397


>gi|281491349|ref|YP_003353329.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375090|gb|ADA64608.1| Exodeoxyribonuclease VII, large subunit [Lactococcus lactis subsp.
           lactis KF147]
          Length = 417

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 141/351 (40%), Positives = 199/351 (56%), Gaps = 14/351 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + GEIS +R   +  H YF+LKD  + I A +W G 
Sbjct: 5   LSVSTLTKYLKAKFDRDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F  EEG++ L +G+I+ +P S  Y I IESL+P G G L    E+ KKKL  EGL
Sbjct: 63  FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K  +P   K IAV+TSP+GAVIRDI+  +  RFP+ +++++P KVQG    +EIA
Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S IPIIS++GHET
Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310
           D TLAD+ AD RA TPT AAE+A P  +    +     E RL N +  LIK +   ++ L
Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWTNEQEKRLFNRLTHLIKIRRERVDKL 296

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +       ++       +LDRL   L    E  +      +     ++  
Sbjct: 297 SQSVVFRQPERLYDGHLEKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%)

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
           + L H I+  R+ + +  Q +  + +Q  R      ++   +   L   T+N++  +   
Sbjct: 280 NRLTHLIKIRRERVDKLSQSV--VFRQPERLYDGHLEKLDRLCERLSVLTENKVANMKHR 337

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
            +    ++       +++         + L          RG++ + D     I    ++
Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397

Query: 480 ATKTRILINFFDGQANAIVI 499
                + +   DG+    V 
Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417


>gi|189485326|ref|YP_001956267.1| exodeoxyribonuclease VII large subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287285|dbj|BAG13806.1| exodeoxyribonuclease VII large subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 412

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 205/358 (57%), Gaps = 9/358 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            Y+V+++S  +K I+E +   V +RGEIS ++  +  GH YF+++D +++I A++++ T 
Sbjct: 19  IYTVTQISDEIKLILEDSYPTVWIRGEISNFKLYNF-GHIYFNIRDKNAQIRAVVFRNTG 77

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE+G++ LV G+++++P    YQ+I+  +   G G L  A EK K+KL  EG F
Sbjct: 78  ISLSFSPEDGMKVLVYGRVSSYPKRGDYQVIVNRIERYGRGELYEAYEKLKEKLKAEGFF 137

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDECPKEIAN 192
            +  K PIP I   I ++TS  GA +RDIL+ I      + ++I+PV+VQG E  KEI  
Sbjct: 138 DESAKKPIPDIVSRIGIVTSQDGAALRDILKVIDSLNANVEILIYPVRVQGKEAEKEIPQ 197

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI  LN+          D++++ RGGG++EDLW FN E + RAI  S IP++S +GHE D
Sbjct: 198 AIEYLNSR-----HKDLDVLLVGRGGGAVEDLWAFNTESVARAIFASEIPVVSCVGHEVD 252

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS--L 310
           +T+AD+ AD+RAPTP+ AAEM +  + ++++ +  L   L+  I  ++  +   L+    
Sbjct: 253 FTIADFVADMRAPTPSAAAEMVLRSRNYIKTRIELLGESLSRAINFILGDRSAELDRLIS 312

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +AL             LD L   L  ++  +   K  +  ++  R+     +  +++
Sbjct: 313 SRALTKPRLIYEYKISYLDGLGSRLLKSIGRLFESKSENLENVSRRLDIVSPLSVLKR 370



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 2/144 (1%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                  + ++R +I  + + + + + + + +I  ++  ++  L   R  TK R+ Y + 
Sbjct: 267 PSAAAEMVLRSRNYIKTRIELLGESLSRAINFILGDRSAELDRLISSRALTKPRLIYEYK 326

Query: 419 --HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
             ++  L +R+   +    +S   ++   +R L   +  + LKRG++   D+NN  I   
Sbjct: 327 ISYLDGLGSRLLKSIGRLFESKSENLENVSRRLDIVSPLSVLKRGFSICFDSNNEIIKDS 386

Query: 477 RNLATKTRILINFFDGQANAIVIN 500
           +N+     I I F     NA V +
Sbjct: 387 KNVNVGDDISIKFASCSLNAQVKS 410


>gi|168214396|ref|ZP_02640021.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           CPE str. F4969]
 gi|170714112|gb|EDT26294.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           CPE str. F4969]
          Length = 400

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVCEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK + +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRVGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGGSIE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  I R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLKEMINDLVNKKEFLHRAIDRKFLNAKKD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKEDK 368



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 54/134 (40%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++    ++ K++ + + + +  +++  +K   +    +     K+ I      +  L  
Sbjct: 265 LKEMINDLVNKKEFLHRAIDR--KFLNAKKDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I +   L     +
Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|148379846|ref|YP_001254387.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A
           str. ATCC 3502]
 gi|153933902|ref|YP_001384143.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A
           str. ATCC 19397]
 gi|153936081|ref|YP_001387684.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A
           str. Hall]
 gi|168180473|ref|ZP_02615137.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum NCTC
           2916]
 gi|166232352|sp|A7FUU0|EX7L_CLOB1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|166232353|sp|A5I309|EX7L_CLOBH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|148289330|emb|CAL83426.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929946|gb|ABS35446.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A
           str. ATCC 19397]
 gi|152931995|gb|ABS37494.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A
           str. Hall]
 gi|182668793|gb|EDT80771.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum NCTC
           2916]
          Length = 401

 Score =  285 bits (730), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 220/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F PE G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K + VITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNYMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSI 395


>gi|159904547|ref|YP_001548209.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis
           C6]
 gi|159886040|gb|ABX00977.1| exodeoxyribonuclease VII, large subunit [Methanococcus maripaludis
           C6]
          Length = 407

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 127/377 (33%), Positives = 209/377 (55%), Gaps = 12/377 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +VSEL+ ++K  +E +  L    ++GEIS    +H SGH YF+LKD +S ID 
Sbjct: 8   SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSAIDG 66

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++K     + F P +G+  ++ GK++ +  + KYQ    S+   G G L    EK K+K
Sbjct: 67  VMFKTYTKNLNFSPTDGMSVILKGKVSLYTKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L  EGLF + +K  IP  PK I +ITSPTGA I+DI++    R   + +II+P  VQG+ 
Sbjct: 127 LENEGLFDETNKQKIPKYPKNIGIITSPTGAAIKDIIKVTRNRNSSVNLIIYPAVVQGES 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K +   + +LN L       + D+II+ARGGGS+EDLW FNDE + RAI  S  P+++
Sbjct: 187 AAKTVIAGLSELNNL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T++D+ +DLRA TP+ AAE+ V  +  L+S++ N E  L + +   I  +  
Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYKEYELKSTINNFERILKHRMKIEIANRSY 300

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L   +   +    +   +  ++R+   + H ++  I  + + F    + + +   +
Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLHIERIMTLINHEIKSKISYELKRFEKSYSLLNAYNPL 360

Query: 364 HNIQKNRQHILEKQQHI 380
           + + K    I ++ + I
Sbjct: 361 NVLNKGYSIIQDENEKI 377



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRIEF 429
            +     + E+I+K  ++     +  ++ IL+  + +   K++I     HI++++T I  
Sbjct: 275 ELKSTINNFERILKHRMKIEIANRSYELDILYSKIEKNSPKSKIEKQKLHIERIMTLINH 334

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  KI         +  +L ++   N L +GY+ IQD N   ++ K +  T+  + I  
Sbjct: 335 EIKSKISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIMSSKNSFKTENNVKITL 394

Query: 490 FDGQANAIVI 499
            DG  NA +I
Sbjct: 395 KDGTVNANII 404


>gi|225570634|ref|ZP_03779657.1| hypothetical protein CLOHYLEM_06734 [Clostridium hylemonae DSM
           15053]
 gi|225160552|gb|EEG73171.1| hypothetical protein CLOHYLEM_06734 [Clostridium hylemonae DSM
           15053]
          Length = 402

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 115/362 (31%), Positives = 194/362 (53%), Gaps = 13/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              Y+V +++ ++K++   +  L  + V+GE+S  +  H+SGH YFSLKD    I  +++
Sbjct: 2   RNVYTVRQVNAYIKNMFTQDYMLGRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F   EG + +V+G +  +  S  YQ+  + +   G G L    +  K++L E
Sbjct: 61  AGQRGGLSFRMGEGQQVIVMGSVNVYERSGSYQLYAKEIRLDGEGVLYEKFQMLKRELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K P+P   + I ++T+PTGA +RDI+     R P +++I++P +VQG+   +
Sbjct: 121 MGMFAPEYKKPLPPYAQRIGIVTAPTGAAVRDIMNIARRRNPYVQLILYPAQVQGEGAKE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L            D++I+ RGGGSIEDLW FN+E + RAI + S+P+ISA+G
Sbjct: 181 SIVRGIQMLERA-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFDCSVPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+ADY ADLRAPTP+ AAE+AV   + L   L     RL+ ++ + ++ +   L 
Sbjct: 234 HETDTTIADYVADLRAPTPSAAAELAVYDIQKLNGELNEAGMRLSRLMRQKLQMERMRLR 293

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                L   +    L   + RL  +   L   +E  +          + ++K    +  +
Sbjct: 294 EYETKLKYLHPVNKLREQQQRLVDMEDRLRGLMEGRLTAARHRLAVYVEKMKGLSPVGKL 353

Query: 367 QK 368
            +
Sbjct: 354 NQ 355



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 55/137 (40%), Gaps = 2/137 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQK    + E    + ++++Q L+   +  +E    L  L     N++      +  +  
Sbjct: 263 IQKLNGELNEAGMRLSRLMRQKLQMERMRLREYETKLKYL--HPVNKLREQQQRLVDMED 320

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+  ++  ++ +    +++    ++  +    L +GY+ +Q  +   +   R++    R+
Sbjct: 321 RLRGLMEGRLTAARHRLAVYVEKMKGLSPVGKLNQGYSYVQGKDGKTVKSIRDVKENDRL 380

Query: 486 LINFFDGQANAIVINKA 502
            +   DG   A V    
Sbjct: 381 SVYVTDGIVYAAVAGVK 397


>gi|302380353|ref|ZP_07268823.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311843|gb|EFK93854.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna
           ACS-171-V-Col3]
          Length = 444

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 134/492 (27%), Positives = 222/492 (45%), Gaps = 57/492 (11%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSV E+S ++++ +  +  LS+V V GEIS +   + SGH YF LKD  + I  +I+K 
Sbjct: 3   VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
                    ++G +  + G ITT+ GSS YQ++++    SG+G L     + K+KL +EG
Sbjct: 62  MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
            FS+  K  I   PK I VITS TGA + DI + I  R+P+  ++I+   VQG++  + I
Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  ++           D +I+ RGGGS EDL  +NDE +++ I N+  PIISA+GHE
Sbjct: 182 IEGIKYMDEQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D+ ADLRA TPT AAE+A      L+  L    A++N I+ R  + +   L   
Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFGELKIYLQESYAKINRILSRRFEDENQELEYY 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            K L                         + II     +   +   +K        +  +
Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +++++K      I                    +   +    +      + K+   +   
Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSMEIDKLNKIRITMIKS 369

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L   I      +      L        L++GY  +   ++  I+   ++     I++   
Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSTILEKGYAKVL-KDDKNISSVDDVKKNDNIILIMK 428

Query: 491 DGQANAIVINKA 502
           DG+ + +V NK 
Sbjct: 429 DGKLDTLVQNKE 440


>gi|167618142|ref|ZP_02386773.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           Bt4]
          Length = 347

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/316 (34%), Positives = 178/316 (56%), Gaps = 8/316 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K  +P  P+ I V+TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDSRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDR 330
            +  + L      + +
Sbjct: 314 ISPAERLQRQSMHVGQ 329


>gi|322806135|emb|CBZ03703.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum
           H04402 065]
          Length = 401

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 220/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F PE G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K + VITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395


>gi|319763306|ref|YP_004127243.1| exodeoxyribonuclease vii, large subunit [Alicycliphilus
           denitrificans BC]
 gi|330825501|ref|YP_004388804.1| exodeoxyribonuclease 7 large subunit [Alicycliphilus denitrificans
           K601]
 gi|317117867|gb|ADV00356.1| exodeoxyribonuclease VII, large subunit [Alicycliphilus
           denitrificans BC]
 gi|329310873|gb|AEB85288.1| Exodeoxyribonuclease 7 large subunit [Alicycliphilus denitrificans
           K601]
          Length = 445

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 125/458 (27%), Positives = 219/458 (47%), Gaps = 30/458 (6%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64
             +  +    + V  L   +   +++  + + VRGEI+G+    SSGH YF+LKD   +I
Sbjct: 4   PPQAGVAPRIWEVGALCRAIADTLQARFNPIAVRGEITGF-SRASSGHCYFTLKDGQGQI 62

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
              +++   + ++F+P +G    V G++  +      Q+I+E L  +G G L     + K
Sbjct: 63  RCAMFRRAADLLDFMPRDGELVEVRGRLGVYEARGDLQLIVEGLRRAGQGALFEQFLRLK 122

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            +L  EGLF    K P+P +P+ I ++TSP  A +RD++  ++ R P + V++ P  VQG
Sbjct: 123 AQLEAEGLFDGARKRPLPVMPRGIGLVTSPGAAALRDVVTALARRVPHIPVVLVPALVQG 182

Query: 184 DECPKEIANAILQLNTLKEG------------RTCPRPDIIILARGGGSIEDLWHFNDEM 231
            + P  I +A+ +L  L +                P  D+I+L RGGGSIEDLW FNDE 
Sbjct: 183 AQAPASICDALSKLYLLAQAGSAMEGDPASKTGAPPPIDVILLVRGGGSIEDLWAFNDER 242

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           + R I  S +P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +     +L  L  R
Sbjct: 243 VARTIVQSPVPLVSGVGHETDFTIADFCADLRAPTPTAAAELVSEPRAVWLGALDLLAGR 302

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
           L +   R I  +   L+   + L      ++  R RL  L + + H + + + R  +   
Sbjct: 303 LQDAAQRQIDLRHQRLDQASQRLGRPSGLVAQQRLRLAALAQRMRHGVLLKMQRMAQASQ 362

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            +   +            R+ + ++ + +E+      R   L  +  +   + L    + 
Sbjct: 363 ALEASLPQGV--------RRSLAQRGERLERAAL---RLELLNPQLVLERGYALLTDAEG 411

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           R       ++    R+   +  ++      +++  R L
Sbjct: 412 R-----AVLRPSQVRLGDAVHARLAEGELDLTVAQRRL 444


>gi|148657279|ref|YP_001277484.1| exodeoxyribonuclease VII large subunit [Roseiflexus sp. RS-1]
 gi|148569389|gb|ABQ91534.1| Exodeoxyribonuclease VII large subunit [Roseiflexus sp. RS-1]
          Length = 393

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 120/359 (33%), Positives = 198/359 (55%), Gaps = 13/359 (3%)

Query: 15  YSVSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS+L+ +L+ +++++     V V GE+S +   H SGH YF+LK+  ++I A++WK  
Sbjct: 4   LTVSQLNTYLRDLLDADDLLSDVWVEGEVSSFN-RHFSGHCYFTLKEGDAQIGAVMWKSV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++  LP  G   L  G++  +    + Q+ +++L P+G G L    E+ K++L  EGL
Sbjct: 63  AARMATLPANGDAVLAHGRVAFYEVRGQVQLYVDTLRPAGIGVLQAQFERLKERLAAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    K P+P +P  I ++TSPTGA ++D+L  +  R+PL  V+  P +VQG      I 
Sbjct: 123 FDQSRKRPLPPLPHRIGIVTSPTGAALQDMLNILRRRYPLAEVLFAPCQVQGAGAVDTII 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+     L E       D+II+ARGGG+ EDLW FNDE + RA+  S +P++S +GHET
Sbjct: 183 EAL---CALYEAD----VDVIIVARGGGAAEDLWTFNDERLARAVFASPVPVVSGVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TL D+ AD+RAPTP+ AAEMA P    L   +  L  RL+  + + +    + ++ L 
Sbjct: 236 DTTLIDFVADVRAPTPSAAAEMASPDMTELLDDIRQLRNRLDAAVTQRLTTARDGVSHLN 295

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + L   + ++ +   R  +D L       LE  I     H + +  R+++   +  + +
Sbjct: 296 RRLVLCSPERRIRRDRQHIDDLMHRATITLERRITLARAHLDGVRGRLQALSPLATLDR 354



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 2/127 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I + +  ++  V Q L             L  +    + RI     HI  L+ R    L
Sbjct: 268 DIRQLRNRLDAAVTQRLTTARDGVSHLNRRL--VLCSPERRIRRDRQHIDDLMHRATITL 325

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             +I      +      LQ+ +   TL RGY  +Q T    IT    +A    I +    
Sbjct: 326 ERRITLARAHLDGVRGRLQALSPLATLDRGYAVVQSTTGALITDASLVAPDDWIEVTVRR 385

Query: 492 GQANAIV 498
           G   A V
Sbjct: 386 GSFRARV 392


>gi|332981366|ref|YP_004462807.1| exodeoxyribonuclease VII, large subunit [Mahella australiensis 50-1
           BON]
 gi|332699044|gb|AEE95985.1| exodeoxyribonuclease VII, large subunit [Mahella australiensis 50-1
           BON]
          Length = 409

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 135/360 (37%), Positives = 218/360 (60%), Gaps = 12/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            +SVS+L+ ++K +  S+  L  V VRGEIS Y+ +HSSGH+YF+LKD +S+I  ++++ 
Sbjct: 5   IFSVSQLTAYIKGMFSSDPLLHSVYVRGEISNYK-LHSSGHSYFTLKDQNSKIRCVMFRQ 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               I F  ++G++ LV G +  +    +YQ+  E + P G G+L  A E+ K KL ++G
Sbjct: 64  YGQPI-FAMQDGMDVLVQGYVNVYDRDGQYQLYAERIEPFGVGSLHLAFEQLKAKLEQDG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF   HK P+P  PK I V+TS TGA +RDI+     R+P + ++I PV VQG     +I
Sbjct: 123 LFDRAHKKPLPLFPKRIGVVTSDTGAAVRDIINVAHRRYPNIDLLIVPVAVQGKAAAIQI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           + AI  LN + E       D+II+ RGGGSIE+LW FN+E++ R+I  S IP++SA+GHE
Sbjct: 183 SEAIDALNVMDES-----VDVIIVGRGGGSIEELWPFNEEIVARSIYRSHIPVVSAVGHE 237

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T++D+ AD+RAPTP+ AAE+ VP+K  L+  +  L       +  L++ +   L  L
Sbjct: 238 TDFTISDFVADMRAPTPSAAAELVVPLKTELEQRIAGLCLNAKRAVDMLVEEQRRCLYKL 297

Query: 311 L--KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              + + +  Q L   + +LD+  R L  N+   +  K   +N + +R+++   +  +++
Sbjct: 298 QGSRIMRDPMQLLKDKQQQLDQAERYLLINMHHRMEIKGALYNDLKHRLEAFNPLGALKR 357



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 6/144 (4%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQTKNRIFYLHTHIKKLITRIE 428
            E +Q I  +     R + +  +E+   L+ L+           +      + +    + 
Sbjct: 266 TELEQRIAGLCLNAKRAVDMLVEEQRRCLYKLQGSRIMRDPMQLLKDKQQQLDQAERYLL 325

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487
             + H+++      +     L++F     LKRGYT   D  + + I     L+   RI I
Sbjct: 326 INMHHRMEIKGALYNDLKHRLEAFNPLGALKRGYTMTLDVEDKSLIKSVSELSLGQRIHI 385

Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511
            + DG+A A +++    +E   ++
Sbjct: 386 IYDDGRAQAEIVDLEVERENDDRR 409


>gi|193215381|ref|YP_001996580.1| exodeoxyribonuclease VII large subunit [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088858|gb|ACF14133.1| exodeoxyribonuclease VII, large subunit [Chloroherpeton thalassium
           ATCC 35110]
          Length = 400

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 131/352 (37%), Positives = 205/352 (58%), Gaps = 7/352 (1%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    Y+VS L+  ++  +E       +RGEIS ++  HSSGH YF+LKD+ ++I  IIW
Sbjct: 1   MTAKTYTVSALTDAIRASLEQTFPDFSLRGEISNFK-RHSSGHIYFTLKDSGAQIPVIIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    K+ F  ++G+E +V G++  +P S +YQ+I  ++ P G G L  A  +  + L +
Sbjct: 60  RSLAQKLRFEMQDGLEIVVEGRLEVYPPSGRYQVICTNVSPVGEGILQQAFARLMQTLAK 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +GLF D HK  +P +P++I V+TSPTGAVI+DI   ++ R+P  ++ +FPV+VQG+E   
Sbjct: 120 DGLFDDAHKKDLPRLPELIGVVTSPTGAVIQDIQTVLARRYPAAQLTLFPVRVQGEEAMA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI  AI   N         RPD++I+ RGGGS+EDLW FN+E + RAI  S IPIISA+G
Sbjct: 180 EIVAAISYFNR---QTGKNRPDVLIVGRGGGSLEDLWAFNEESVARAIFASGIPIISAVG 236

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306
           HETD T+AD  AD+RA TP+ AAE+A P  + +Q+S+     ++   I   I+  Y+   
Sbjct: 237 HETDITIADLVADVRAATPSMAAELAAPSHDEIQASIDGALQQMAFSIASKIEGNYRQVN 296

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
                 A     +T+   R +++   +++E  L     +    F     ++ 
Sbjct: 297 SILGSYAFNRPVRTIENKRQQVENQIQQMERGLVQKWMQADARFKLAEGKLY 348



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 6/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-----LEKKEK 398
                    ++  +++       +       E Q  I+  ++Q    I        ++  
Sbjct: 237 HETDITIADLVADVRAATPSMAAELAAPSHDEIQASIDGALQQMAFSIASKIEGNYRQVN 296

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +      +    I      ++  I ++E  L  K         +    L    ++N L
Sbjct: 297 SILGSYAFNRPVRTIENKRQQVENQIQQMERGLVQKWMQADARFKLAEGKLYLLGHENIL 356

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           KRGY  +   +   I Q  +L+      + F DG+    V +  
Sbjct: 357 KRGYALVL-KDGKPIRQASSLSAGDLAKLKFQDGEKTVRVEDDE 399


>gi|121594644|ref|YP_986540.1| exodeoxyribonuclease VII large subunit [Acidovorax sp. JS42]
 gi|120606724|gb|ABM42464.1| Exodeoxyribonuclease VII large subunit [Acidovorax sp. JS42]
          Length = 445

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 127/449 (28%), Positives = 211/449 (46%), Gaps = 30/449 (6%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V  L   +   +E+  + V VRGEI+G+    SSGH YF+LKD + +I   +++   
Sbjct: 13  IWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFTLKDGNGQIRCAMFRRAA 71

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P +G    V G++  +      Q+I++SL  +G G L     + K +L  EGLF
Sbjct: 72  GVLDFTPRDGELVEVRGRLGVYEARGDLQLIVDSLQRAGQGALFEQFMRLKAQLEAEGLF 131

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P +P+ I V+TSP  A + D++  +  R P + V++ P  VQG + P  IA 
Sbjct: 132 DAARKRALPAMPRGIGVVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGAQAPASIAE 191

Query: 193 AILQLNTL------------KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           A+ ++  L                  P  D+I+L RGGGSIEDLW FNDE + RAI  S 
Sbjct: 192 ALSKMYLLAQEGRALDGDLAMNAGAPPAIDVILLVRGGGSIEDLWAFNDERVARAIVQSP 251

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +     +L  L  RL + + R +
Sbjct: 252 VPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPRAVWLGALDLLAQRLADGVQRQV 311

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+   + L      +   + RL  L + L H L +   R       + +     
Sbjct: 312 DLRHQRLDQAAQRLGRPSGFVGRQQLRLSGLEQRLRHGLLLKTQRLAHAGQALQSHFPQI 371

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               ++ + R+ +      ++ +         L  +   A+L   + Q   R        
Sbjct: 372 V-QRSLVQRRERLERAALRLQLLDP------RLVLQRGYALLTDAQGQPVTR-------- 416

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449
                R+   +  ++      ++++ R L
Sbjct: 417 -PAQVRLGDAVHAQLAEGELDLTVSQRRL 444


>gi|153853042|ref|ZP_01994451.1| hypothetical protein DORLON_00436 [Dorea longicatena DSM 13814]
 gi|149753828|gb|EDM63759.1| hypothetical protein DORLON_00436 [Dorea longicatena DSM 13814]
          Length = 404

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+V +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    I  +
Sbjct: 1   MARNVYTVKQVNSYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F   EG + +V+G +  +  +  YQ+  + +   G GTL    +  K++L
Sbjct: 60  MFAGQRGGLSFHMREGQQIIVLGSVNVYERTGSYQLYAQEIRLDGEGTLYEKYQMLKQEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            E G+F+ ++K  IP   K I V+T+PTGA +RDI+   + R P ++++++P +VQG+  
Sbjct: 120 EEMGMFAPEYKKAIPRYAKRIGVVTAPTGAAVRDIMNISARRNPYVQLLLYPAQVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I   I  L            D+II+ RGGGSIEDLW FNDE + RAI +  +P+ISA
Sbjct: 180 KESIVRGIRML-------ETKNVDVIIVGRGGGSIEDLWAFNDECVARAIFDCQVPVISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADY ADLRAPTP+ AAE+AV     LQ  L     R+N  +   I+     
Sbjct: 233 VGHETDVTIADYVADLRAPTPSAAAELAVWDYRQLQGYLDECRLRMNRSMTGTIRINRLR 292

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  L   L   +    L   + RL  L  EL   +   +          I ++     + 
Sbjct: 293 LKELDVRLSYLHPRHKLQDQQQRLIELEEELRTLMRDRVKEARHRLAIQIEKLNGLSPVR 352

Query: 365 NIQK 368
            + +
Sbjct: 353 KLNQ 356



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 51/139 (36%), Gaps = 2/139 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ + ++ E +  + + +   +R   L  KE    L  L    ++++      + +L   
Sbjct: 265 RQLQGYLDECRLRMNRSMTGTIRINRLRLKELDVRLSYL--HPRHKLQDQQQRLIELEEE 322

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +  ++  ++K     ++I    L   +    L +G+  +++ +   +   R +     + 
Sbjct: 323 LRTLMRDRVKEARHRLAIQIEKLNGLSPVRKLNQGFAYVEEADGGVVKSIRQVEKGDELT 382

Query: 487 INFFDGQANAIVINKAPPK 505
           +   DG     V       
Sbjct: 383 VYVTDGLIRTSVKAVQKKT 401


>gi|218132226|ref|ZP_03461030.1| hypothetical protein BACPEC_00083 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992885|gb|EEC58885.1| hypothetical protein BACPEC_00083 [Bacteroides pectinophilus ATCC
           43243]
          Length = 404

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/358 (32%), Positives = 198/358 (55%), Gaps = 13/358 (3%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           Y+V +++ ++K++   +   + V VRGEIS  +  H+SGH YF+LKD    I A+++ G 
Sbjct: 4   YTVGQINLYIKNMFRQDFVLNKVIVRGEISNCK-YHTSGHIYFTLKDETGTIAAVLFAGN 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  E G++  V G+I  +    +YQ+ + S+  +G G L    E+ K +L E G+
Sbjct: 63  AKNVGFRLENGMKVNVSGRIDIYERDGRYQLYVNSVEAAGMGDLYRRFEQLKAELEEMGM 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F+ ++K PIP   + I ++T+ TGA I+DI+     R P +++I++P  VQGDE    I 
Sbjct: 123 FAQEYKKPIPAFARKIGIVTASTGAAIQDIINISRRRNPYVQLILYPATVQGDEAKYSIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I +L+++         D+II  RGGGSIEDLW FN+E + RAI +++ PIISA+GHET
Sbjct: 183 KGIRRLDSM-------GLDVIIAGRGGGSIEDLWAFNEECVARAIFDAATPIISAVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ AD+RAPTP+ AAE+AV     ++ ++    + LN+ +   ++     L    
Sbjct: 236 DFTIADFVADMRAPTPSAAAELAVADITGIEGAIEQYRSGLNSAMNYKLERMRMMLEQRA 295

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L   + +  L+ +R         L   ++ ++  K         ++     +  ++
Sbjct: 296 AKLKYLSPESKLNENRQITADYEDRLNRAIKSVVTLKRHELAIKAEKLHGLSPLTALK 353



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 2/134 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           I + +  +   +   L  + +  +++ A L  L    ++++            R+   + 
Sbjct: 269 IEQYRSGLNSAMNYKLERMRMMLEQRAAKLKYL--SPESKLNENRQITADYEDRLNRAIK 326

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +      ++I    L   +    LK GY  ++D     +    +++    I +N  DG
Sbjct: 327 SVVTLKRHELAIKAEKLHGLSPLTALKGGYAYVEDDVGRPVRSIGDVSPGNNIRVNVTDG 386

Query: 493 QANAIVINKAPPKE 506
             +A V   +    
Sbjct: 387 IISACVTEVSAADS 400


>gi|167561818|ref|ZP_02354734.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis
           EO147]
          Length = 342

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/316 (34%), Positives = 178/316 (56%), Gaps = 8/316 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  +S R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S + ++  +GHETD+T
Sbjct: 200 EAANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASEVHVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD+AAD+RAPTPTGAAE+  P +  L   L +    L   + R +  +   L+ L + L
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELNDRRNALARGLRRGLDLRAQQLDWLARRL 313

Query: 315 PNSDQTLSCSRYRLDR 330
            +  + L      + +
Sbjct: 314 ISPAERLQRQSTHVGQ 329


>gi|153814702|ref|ZP_01967370.1| hypothetical protein RUMTOR_00917 [Ruminococcus torques ATCC 27756]
 gi|317500232|ref|ZP_07958462.1| exodeoxyribonuclease 7 large subunit [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087538|ref|ZP_08336470.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847733|gb|EDK24651.1| hypothetical protein RUMTOR_00917 [Ruminococcus torques ATCC 27756]
 gi|316898358|gb|EFV20399.1| exodeoxyribonuclease 7 large subunit [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330401756|gb|EGG81334.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 402

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 13/406 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K++   +   + + V+GEIS  +  H SGH YFSLKD    I  +++ G
Sbjct: 4   IYTVKQVNSYIKNMFTQDFMLNRIYVKGEISNCK-YHPSGHIYFSLKDESGTIACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           +   + F  + G   +  G ++ +    KYQ+    +   G+G L    E  K++L E G
Sbjct: 63  SRAGLSFTLKNGQRVIAFGSVSVYERDGKYQLYAREIKLDGAGELYEKFEALKRELCEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +FSD++K  IP   K + ++T+  GA +RDI+     R P +++I++P  VQG+   K I
Sbjct: 123 MFSDEYKQRIPAYVKTVGIVTAQNGAAVRDIINVAKRRNPYVQLILYPALVQGEGAVKSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L            D++I+ RGGGSIE+LW FN+E + RAI   S+P+ISA+GHE
Sbjct: 183 IRGIRML-------EQQGVDVMIVGRGGGSIEELWAFNEEEVARAIFECSVPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+AD+ ADLRAPTP+ AAE+AV      + ++   E R+    +  I          
Sbjct: 236 TDVTIADFVADLRAPTPSAAAELAVYEIRECKKTMSAYEDRIVRAALSQIGLFRTKAERF 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +    L   R     +   +   +E  + ++         R+K    +  +  
Sbjct: 296 SMRLKLLHPRHKLYEHRQFTAEMENRIRDIMERRLTQEKHRLALNAERMKRVSPLLKLSS 355

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
              +I  ++    +   Q  R   LE       +      T+  I 
Sbjct: 356 GYSYIRSEEGKNIRSTAQVKRGEKLEIFVSDGKIEAEVHNTETMIH 401



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 2/138 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I++ ++ +   +  I +     +     + +     L +L    +++++       ++  
Sbjct: 263 IRECKKTMSAYEDRIVRAALSQIGLFRTKAERFSMRLKLL--HPRHKLYEHRQFTAEMEN 320

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           RI  I+  ++      +++    ++  +    L  GY+ I+      I     +    ++
Sbjct: 321 RIRDIMERRLTQEKHRLALNAERMKRVSPLLKLSSGYSYIRSEEGKNIRSTAQVKRGEKL 380

Query: 486 LINFFDGQANAIVINKAP 503
            I   DG+  A V N   
Sbjct: 381 EIFVSDGKIEAEVHNTET 398


>gi|325290007|ref|YP_004266188.1| Exodeoxyribonuclease VII large subunit [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965408|gb|ADY56187.1| Exodeoxyribonuclease VII large subunit [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 401

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 128/388 (32%), Positives = 207/388 (53%), Gaps = 11/388 (2%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             SV+EL+  +  ++  +  L +  V+GEIS ++    SGH YFS+KD    + A++++ 
Sbjct: 4   VLSVTELNNEISSVLRRDYLLQNCWVKGEISNFKRHSPSGHCYFSVKDEKCSLRAVMFRT 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + + F PE G+  ++ G +  +      QI +E ++PSG G +  A E+ K+KL  EG
Sbjct: 64  AASLLTFSPENGLSVMLRGNVRFYEKDGNIQIYVEEILPSGLGAMYLAFEQLKRKLEAEG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F+   K  IP  P  IA++TS TGA IRD++     R P + +++ P  VQG+  P EI
Sbjct: 124 FFAASRKRAIPKYPARIAIVTSATGAAIRDMMNVTKRRNPYIALLLAPATVQGETAPLEI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI ++N   +       D+II+ RGGGS+E+LW FN E++ RAI NS IP+ISA+GHE
Sbjct: 184 AQAIGRINQHGDS------DVIIVGRGGGSLEELWAFNTEIVARAIFNSKIPVISAVGHE 237

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+T+AD+ AD+RAPTP+ AAE+AVP+ E ++ SL   + +L  +  R ++ K   L  L
Sbjct: 238 VDFTIADFVADMRAPTPSAAAELAVPLYEEMKKSLALNQDKLEKLFGRQLETKRTRLREL 297

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L      ++  R  LD     L+  +   +  K         R+     +  + +
Sbjct: 298 KSEAVLAQPFWRMNNLRQDLDMRTERLQKGITGFLSEKNDILKFTGQRLNLLSPLAVLSR 357

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                 + Q  + + ++Q      L  +
Sbjct: 358 GYAIAQDDQGGLVKSIEQISAAKELFVR 385



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 2/136 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ ++ +   Q  +E++  + L       +E  +    +  Q   R+  L   +     R
Sbjct: 266 EEMKKSLALNQDKLEKLFGRQLETKRTRLRELKSEA--VLAQPFWRMNNLRQDLDMRTER 323

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++  ++  +   +  +  T + L   +    L RGY   QD     +     ++    + 
Sbjct: 324 LQKGITGFLSEKNDILKFTGQRLNLLSPLAVLSRGYAIAQDDQGGLVKSIEQISAAKELF 383

Query: 487 INFFDGQANAIVINKA 502
           +   DG A   V    
Sbjct: 384 VRLIDGIAECEVKKIQ 399


>gi|268316914|ref|YP_003290633.1| exodeoxyribonuclease VII, large subunit [Rhodothermus marinus DSM
           4252]
 gi|262334448|gb|ACY48245.1| exodeoxyribonuclease VII, large subunit [Rhodothermus marinus DSM
           4252]
          Length = 406

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 130/391 (33%), Positives = 209/391 (53%), Gaps = 7/391 (1%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M P       +   + V EL+  L   VES    + V GE+S +R    SGH YF+L+D 
Sbjct: 1   MQPLFDS-IFEPRVWRVGELAKALCETVESLYDELIVEGELSNFRRHRQSGHCYFTLQDG 59

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++  ++W   + ++ F PE+G +  V G++T +    + Q+I  S+  +G+G    A 
Sbjct: 60  EAQLRCVMWASRVQRLYFRPEDGHQVQVHGRLTFYKPRGELQLIATSMTLAGAGARQQAF 119

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  K++L  EGLF    K P+P  P+ I V+TS +GA ++DIL  +  RFP + V+  PV
Sbjct: 120 EALKRRLEAEGLFDPDRKRPLPRFPRRIGVVTSDSGAALQDILSILRRRFPVVEVLHCPV 179

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +    IA AI  +N L E R   RPD++I+ RGGGS+EDLW FN+E++ RAI  S
Sbjct: 180 HVQGLQAAPSIARAIRLMNRLPEDR---RPDVLIVGRGGGSVEDLWAFNEEVVARAIFAS 236

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ISA+GHETD ++AD  AD RA TP+ AAE+AVP ++ L++ LI     +   + + 
Sbjct: 237 HIPVISAVGHETDVSIADLVADRRAATPSMAAEIAVPDRDELETMLIRTVQVMRQYLRQG 296

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +   ++ LL    L      L   +  L RL   L+  +  ++ R+ +    + +R+
Sbjct: 297 LDRRRQRVHMLLHHYGLRRVPDRLDLLKTELQRLEAALQQQVRQLLERRRQTLTLLQSRL 356

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
            +      +Q+    +        +  +   
Sbjct: 357 NAFDPQLPLQRGYVRVRCNGSLATRAHQLQP 387



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427
           R  +        Q+++Q+LR     +++++ +L  H    +  +R+  L T +++L   +
Sbjct: 275 RDELETMLIRTVQVMRQYLRQGLDRRRQRVHMLLHHYGLRRVPDRLDLLKTELQRLEAAL 334

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           +  +   ++    ++++    L +F  +  L+RGY  ++  N +  T+   L     + +
Sbjct: 335 QQQVRQLLERRRQTLTLLQSRLNAFDPQLPLQRGYVRVR-CNGSLATRAHQLQPGDAVTL 393

Query: 488 NFFDGQANAIVIN 500
            F+DG+ +A + +
Sbjct: 394 EFYDGRRDARITS 406


>gi|222110754|ref|YP_002553018.1| exodeoxyribonuclease vii large subunit [Acidovorax ebreus TPSY]
 gi|221730198|gb|ACM33018.1| exodeoxyribonuclease VII, large subunit [Acidovorax ebreus TPSY]
          Length = 445

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 127/449 (28%), Positives = 212/449 (47%), Gaps = 30/449 (6%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V  L   +   +E+  + V VRGEI+G+    SSGH YF+LKD + +I   +++   
Sbjct: 13  IWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFTLKDGNGQIRCAMFRRAA 71

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P +G    V G++  +      Q+I++SL  +G G L     + K +L  EGLF
Sbjct: 72  GVLDFTPRDGELVEVRGRLGVYEARGDLQLIVDSLQRAGQGALFEQFMRLKAQLEAEGLF 131

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P +P+ I V+TSP  A + D++  +  R P + V++ P  VQG + P  IA 
Sbjct: 132 DAARKRALPAMPRGIGVVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGAQAPASIAE 191

Query: 193 AILQLNTLKE------------GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           A+ ++  L +                P  D+I+L RGGGSIEDLW FNDE + RAI  S 
Sbjct: 192 ALSKMYLLAQAGRALDGDLTLNAGASPAIDVILLVRGGGSIEDLWAFNDERVARAIVQSP 251

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +     +L  L  RL + + R +
Sbjct: 252 VPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPRAVWLGALDLLAQRLADGVQRQL 311

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+   + L      +   + RL  L + L H L +   R       + +     
Sbjct: 312 DLRHQRLDQAAQRLGRPSGFVGRQQLRLSGLEQRLRHGLLLKTQRLTHAGQALQSHFPQI 371

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
               ++ + R+ +      ++ +         L  +   A+L   + Q   R        
Sbjct: 372 V-QRSLVQRRERLERAALRLQLLDP------RLVLQRGYALLTDAQGQPVTR-------- 416

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449
                R+   +  ++      ++++ R L
Sbjct: 417 -PAQVRLGDAVHAQLAEGELDLTVSQRRL 444


>gi|327469007|gb|EGF14479.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis
           SK330]
          Length = 446

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H +FSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQHFSLKDEKTVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  +  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYQPNGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           ++A+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+ AD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++   +  
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   +     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|284048212|ref|YP_003398551.1| exodeoxyribonuclease VII, large subunit [Acidaminococcus fermentans
           DSM 20731]
 gi|283952433|gb|ADB47236.1| exodeoxyribonuclease VII, large subunit [Acidaminococcus fermentans
           DSM 20731]
          Length = 404

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 130/389 (33%), Positives = 212/389 (54%), Gaps = 12/389 (3%)

Query: 13  PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             Y+VSE++  +K +   E   +++ ++GE+S +R    SGH YF+LKD  + + A+++ 
Sbjct: 5   KIYTVSEVTRIVKGLFRKEPEFANLQIQGEVSNFRQYP-SGHCYFNLKDGKTLLKAVMFA 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G   +++ LP+ G + L +G+I  +     YQ  ++ ++P G+G L+ A E+ K+KL  E
Sbjct: 64  GAARRLKQLPKNGDQVLGVGRIDLYERDGVYQFYVDMMMPLGAGNLMIAYEQLKEKLTAE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K P+P  PK++ ++TSP GA +RDI+     R P +++ ++PVKVQG E P E
Sbjct: 124 GLFDPGRKRPLPAYPKVVGIVTSPAGAAVRDIINVAGRRDPSVKLRLYPVKVQGTEAPPE 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I  +N           D++I+ RGGGS+EDLW FNDE +VRAIA S IP+ISA+GH
Sbjct: 184 IIRGIRFMNR------HKLADVLIVGRGGGSMEDLWAFNDEGVVRAIAASEIPVISAVGH 237

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+TL+D+AADLRAPTP+ AAE+AVP +   +  L  L  RL   +   ++     L  
Sbjct: 238 EIDFTLSDFAADLRAPTPSAAAELAVPERSGDREILAKLVRRLERTMELRLQDSSRALEK 297

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L +     + ++    +   LD L R LE      +  + +  + +  ++ +      ++
Sbjct: 298 LQEEWVFTHPERLWENAGQTLDTLCRNLEQAGTRRLEERQQKLDLLAAKLGALDPYGVLR 357

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           +        Q    +          L  +
Sbjct: 358 RGYTITENAQGRAVRQPSDLHPGDTLVTR 386



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R+ + +  + +E+ ++   R     +  +      +    +         +  L   +E 
Sbjct: 270 REILAKLVRRLERTMEL--RLQDSSRALEKLQEEWVFTHPERLWENAGQTLDTLCRNLEQ 327

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
             + +++     + +    L +      L+RGYT  ++     + Q  +L     ++  F
Sbjct: 328 AGTRRLEERQQKLDLLAAKLGALDPYGVLRRGYTITENAQGRAVRQPSDLHPGDTLVTRF 387

Query: 490 FDGQANAIVINKAPPKE 506
             G   + V       E
Sbjct: 388 AQGAVVSQVETVKEGTE 404


>gi|188587903|ref|YP_001921550.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum E3
           str. Alaska E43]
 gi|226694642|sp|B2V4R6|EX7L_CLOBA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|188498184|gb|ACD51320.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E3
           str. Alaska E43]
          Length = 399

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 126/376 (33%), Positives = 217/376 (57%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K +++++   +++ V+GEIS  +  HSSGH YFSLKDN+S+++ +
Sbjct: 1   MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   + +    E+G+E +V G+ + +  +  +Q+  + +   G G L    E  K+KL
Sbjct: 60  MFKSKASLLNVALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            + G F +++K  IP   K I V+TS TGAVIRDI+     R P + +I++P KVQGD+ 
Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGVVTSSTGAVIRDIINVTKRRNPLVDIILYPAKVQGDDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            KEI   I   N           D+II+ RGGGSIE+LW+FN+E + + I NS +PIISA
Sbjct: 180 YKEIIAGIEYFNK------NKNIDLIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RA TP+ AAE+AVP+   + + +  +   L+  I + +K   + 
Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVPLLSDINTKIYEISKSLDYEIQKKLKDCKSR 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L S  + L   +    +  S   +D+L   L   ++I I R+ +    + N + ++  I 
Sbjct: 294 LESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353

Query: 365 NIQKNRQHILEKQQHI 380
            + K    I ++  +I
Sbjct: 354 VLNKGYAIIEDENNNI 369



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +     +      ++I   +  + KL  R+ F +  KIK     +     +L +    
Sbjct: 293 RLESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
             L +GY  I+D NNN I +   L  +  I ++  DG   
Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISVSLSDGNIK 392


>gi|154148736|ref|YP_001406844.1| exodeoxyribonuclease VII large subunit [Campylobacter hominis ATCC
           BAA-381]
 gi|166232348|sp|A7I2V3|EX7L_CAMHC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|153804745|gb|ABS51752.1| exodeoxyribonuclease VII, large subunit [Campylobacter hominis ATCC
           BAA-381]
          Length = 387

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 187/349 (53%), Gaps = 10/349 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+   K ++ES+   + V GEIS +    +SGH YF+LKD  + I   ++K T  +
Sbjct: 2   TVSELNEQAKSLLESHFPSIEVVGEISRFTRQPTSGHWYFTLKDEKASISCAMFKSTALR 61

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F+P++G++ ++ GK++ +  +  YQII  S+  +G G L       K+KL +EGLF++
Sbjct: 62  VKFIPKDGLKVIITGKVSIYSPTGNYQIIAASMKLAGEGELEAKFSALKQKLSDEGLFAE 121

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           ++K P+P  P+ IA +TS + A  +D+L+    RF  +++  + V VQG+     + +A+
Sbjct: 122 EYKKPLPKFPQKIAFLTSLSSAAYQDMLRVARDRFALVKIDAYSVFVQGENTASSVISAL 181

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +           D II+ARGGGS EDLW FNDE + RAI  +  P+ISAIGHE D++
Sbjct: 182 KTADK-------KDYDCIIIARGGGSKEDLWGFNDENLARAIFAAHTPVISAIGHEIDFS 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ AD R+ TPT A    +P    L   L   +  L N I    K   N LN    +L
Sbjct: 235 ISDFVADHRSLTPTAAMMDLLPDVNTLLQDLSGADNFLINFINSCFKKCENALNVANLSL 294

Query: 315 --PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              + D  +      L     +LE+ ++  +       N     +KS  
Sbjct: 295 KTKSVDSKILKFENDLREGESKLENFIKFRLSNFENRLNLNTQILKSKA 343


>gi|189500985|ref|YP_001960455.1| exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides
           BS1]
 gi|189496426|gb|ACE04974.1| exodeoxyribonuclease VII, large subunit [Chlorobium
           phaeobacteroides BS1]
          Length = 403

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 200/362 (55%), Gaps = 6/362 (1%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     +++EL+  +K  +E     + V+GEIS ++ +  SGH Y +LKD  ++I A++W
Sbjct: 1   MSEQILTITELTREIKSDLEHRFPAISVKGEISNFK-LPGSGHIYMTLKDEGAQIPAVLW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K    ++    ++G+E +  G+I  +P S +YQ+I  S+  +G+G L  A     +KL  
Sbjct: 60  KNVRMRLPIELKDGMEIIAHGRIEVYPPSGRYQLICTSVSLAGAGMLQQAFAMLLEKLAG 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G F+ +HK P+P IP+ I ++TS TGAVI D+   +  RFP  ++++FPVKVQG +  +
Sbjct: 120 QGYFNQEHKKPLPGIPEKIGLVTSATGAVIEDMSNVLKRRFPAAKLLLFPVKVQGADAAQ 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I NA+   N         +PDIII+ARGGGS+EDL  FN+E +  AI +S+IP+ISA+G
Sbjct: 180 NIINALSYFN--HPLDPAHKPDIIIVARGGGSLEDLQAFNEENVALAIFSSTIPVISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306
           HETD T+AD  AD+RA TP+ AAE+A P    L      L  R +  +   I+   +   
Sbjct: 238 HETDVTIADMVADMRAGTPSIAAEIAAPDTRELLKHNEALLDRQSTALYSKIEGTERQLH 297

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                 A      TL   + R+D   R +  +L     R  R F+ +  R+        +
Sbjct: 298 SLLGSYAFNRPQVTLERMQERIDHSVRFMTQSLRSAFMRTERRFSSVTERLSLLDYRKTL 357

Query: 367 QK 368
           ++
Sbjct: 358 ER 359



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 2/134 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-HMLREQTKNRIFYLHTHIKKLITRIE 428
           R+ +   +  +++        I   +++  ++L      + +  +  +   I   +  + 
Sbjct: 268 RELLKHNEALLDRQSTALYSKIEGTERQLHSLLGSYAFNRPQVTLERMQERIDHSVRFMT 327

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             L           S  T  L    Y+ TL+RG+T ++      IT   +L       + 
Sbjct: 328 QSLRSAFMRTERRFSSVTERLSLLDYRKTLERGFTLVRKEK-RAITSSTDLYEGDMASVI 386

Query: 489 FFDGQANAIVINKA 502
           F DG+    +  K 
Sbjct: 387 FHDGETAVTITGKE 400


>gi|260887339|ref|ZP_05898602.1| exodeoxyribonuclease VII, large subunit [Selenomonas sputigena ATCC
           35185]
 gi|260862975|gb|EEX77475.1| exodeoxyribonuclease VII, large subunit [Selenomonas sputigena ATCC
           35185]
          Length = 409

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 131/358 (36%), Positives = 202/358 (56%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS L+ ++K +  VE  L +V V GE+S Y+   +SGH YF+LKD  + +  +++K   
Sbjct: 14  SVSALTQYIKSMFQVEGLLRNVSVEGELSNYKMY-ASGHCYFTLKDETASLKGVMFKSRA 72

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +  G+++ +     YQ+ +E L+P G+G L  A E+ K +L  EGLF
Sbjct: 73  RLLRFQPENGMKVVATGEVSVYERDGVYQLYVERLLPVGAGELSVAFEQLKARLAAEGLF 132

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192
           ++ HK P+P  P+ I ++TS +GAV+RDI +    R   +R++++P  VQG+    EIA 
Sbjct: 133 NEDHKKPLPPFPRTIGIVTSLSGAVLRDIYRVSKRRDANIRLVLYPTLVQGEGAAAEIAA 192

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS EDLW FN+E +VRAI +S IP+ISA+GHETD
Sbjct: 193 AIRFFNEKYP------VDLLIVGRGGGSAEDLWAFNEEPVVRAIYDSVIPVISAVGHETD 246

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL+DYA+D+RA TP+ AAE+AVP    L   +   E RL   +   + Y+   +  L  
Sbjct: 247 TTLSDYASDVRAATPSQAAELAVPETAALFRRIGECEMRLQKAVKSRLYYERERVERLGG 306

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                     L+  R RLD     L+  +   +  K   F     +++    +H I++
Sbjct: 307 FFLKRPPQALLADRRQRLDMAAEALDRGMRRALLEKQHAFRVAAEKLEMLNPLHVIRR 364



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I E +  +++ VK  L Y     +        L+   +  +      +      ++  
Sbjct: 277 RRIGECEMRLQKAVKSRLYYERERVERLGG--FFLKRPPQALLADRRQRLDMAAEALDRG 334

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +     +  +    L+     + ++RGY+ ++  +   +   + LA    IL+   
Sbjct: 335 MRRALLEKQHAFRVAAEKLEMLNPLHVIRRGYSVVE-KDGAAVRSVKELAAGDGILVRLA 393

Query: 491 DGQANAIVIN 500
           DG  +A+V  
Sbjct: 394 DGSFDAVVGG 403


>gi|166030415|ref|ZP_02233244.1| hypothetical protein DORFOR_00076 [Dorea formicigenerans ATCC
           27755]
 gi|166029773|gb|EDR48530.1| hypothetical protein DORFOR_00076 [Dorea formicigenerans ATCC
           27755]
          Length = 403

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 190/364 (52%), Gaps = 13/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+V +++ ++K++   +  L+ + V+GE+S  +  H+SGH YFSLKD    I  +
Sbjct: 1   MTRNVYTVGQVNAYIKNMFTQDYMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F   EG + +V+G++  +     YQ+    +   G G L    +  K++L
Sbjct: 60  MFAGQRGGLSFRMCEGQQIVVLGQVNVYERGGSYQLYAREIRLDGEGVLYERFQALKREL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            E G+F+ ++K PIP   + I V+T+PTGA IRDI+     R P  ++I++P  VQG+  
Sbjct: 120 EEMGMFASEYKMPIPAYARRIGVVTAPTGAAIRDIMNISRRRNPFVQLILYPALVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I   I  L+           D+II+ RGGGSIEDLW FN+E + RAI     P+ISA
Sbjct: 180 KESIVKGIRMLDQ-------DDIDVIIVGRGGGSIEDLWAFNEEEVARAIFYCRTPVISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADY ADLRAPTP+ AAE+AV      Q  +    ++L   + R ++     
Sbjct: 233 VGHETDTTIADYVADLRAPTPSAAAELAVYDYWKTQEQVDVRRSQLQGYLRRKMEVSRLR 292

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +      L   + +  L   R RL     +L   L   + +    F   + ++K    + 
Sbjct: 293 IEKYETKLKYLHPEHKLQEDRQRLVDTEEKLHMLLHRKVEQYRHRFAVYMEQMKGLSPLQ 352

Query: 365 NIQK 368
            + +
Sbjct: 353 KLNQ 356



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 50/136 (36%), Gaps = 2/136 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            K ++ +  ++  ++  +++ +    L  ++    L  L    ++++      +     +
Sbjct: 265 WKTQEQVDVRRSQLQGYLRRKMEVSRLRIEKYETKLKYL--HPEHKLQEDRQRLVDTEEK 322

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +  +L  K++      ++    ++  +    L +GY  I+D +   +     +     + 
Sbjct: 323 LHMLLHRKVEQYRHRFAVYMEQMKGLSPLQKLNQGYAYIEDVDKKAVRSIEQVRCGDHLS 382

Query: 487 INFFDGQANAIVINKA 502
               DG    IV +  
Sbjct: 383 AYVTDGSIQMIVESVK 398


>gi|197301785|ref|ZP_03166855.1| hypothetical protein RUMLAC_00511 [Ruminococcus lactaris ATCC
           29176]
 gi|197299225|gb|EDY33755.1| hypothetical protein RUMLAC_00511 [Ruminococcus lactaris ATCC
           29176]
          Length = 408

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/360 (31%), Positives = 195/360 (54%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    I  +++ G
Sbjct: 11  VYTVRQVNSYIKNMFAQDFMLNRIYVKGEVSNLK-YHTSGHIYFSLKDESGTIACVMFAG 69

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           + + + F  EEG + +V+G +  +    KYQ+    ++  G G L    E  KK+L E G
Sbjct: 70  SRSGLSFRMEEGQQIIVLGAVDVYARDGKYQLYARKIVRDGVGLLYERFELLKKELQEMG 129

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +F+ ++K  IP   + + V+T+PTGA +RDI+     R P  ++I++P  VQG+   + I
Sbjct: 130 MFAPEYKQKIPKYIRRLGVVTAPTGAAVRDIINITKRRNPFVQIILYPALVQGEGASESI 189

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L          + D++I+ RGGGS+EDLW FN+E + RA+ + S+P+ISA+GHE
Sbjct: 190 VKGIHALEA-------EKVDVMIVGRGGGSMEDLWAFNEEAVARAVFDCSVPVISAVGHE 242

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ D+ ADLRAPTP+ AAE+AV     ++ +L   E RL + +  +++ K   L   
Sbjct: 243 TDTTIIDFVADLRAPTPSAAAELAVYDFMEMKKNLKLREERLLHFMQLILERKRQKLEQY 302

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              +   +  Q L+  R         L   +   + ++      +  R+K    +  + +
Sbjct: 303 SLRMRAYHPQQRLNEQRQFAADAENRLRREMMRRLEQEKYRLGLMAERLKGLSPLEKLSQ 362



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 15/140 (10%), Positives = 52/140 (37%), Gaps = 2/140 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             + ++++  +++ +   ++  L     + ++    L M     + R+            
Sbjct: 270 FMEMKKNLKLREERLLHFMQLILERKRQKLEQY--SLRMRAYHPQQRLNEQRQFAADAEN 327

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   +  +++     + +    L+  +    L +GY  +++++   +    N+    +I
Sbjct: 328 RLRREMMRRLEQEKYRLGLMAERLKGLSPLEKLSQGYAYVENSSGANVRTVSNVKQGEQI 387

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DG+  A V      +
Sbjct: 388 TVYVTDGRIRAEVTGVEKEE 407


>gi|157150418|ref|YP_001449995.1| exodeoxyribonuclease VII large subunit [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|189037816|sp|A8AW35|EX7L_STRGC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157075212|gb|ABV09895.1| exodeoxyribonuclease VII, large subunit [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 446

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 159/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%)

Query: 13  PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           PEY SVS L+ +LK   E +  L  V + G++S +R   +  H YFSLKD  + I   IW
Sbjct: 2   PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  +P  PK I V+TSP+GAVIRDI+  +S RFP + ++++P KVQGD    
Sbjct: 120 EGLFQDKFKQSLPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +IA+ I   N   +       D++I+ RGGGSIEDLW FN+E  VRAI  S IP+IS++G
Sbjct: 180 QIADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307
           HETD TLAD+AAD RA TPT AAE+A PV +  L   L   E R++  I   + Y    L
Sbjct: 234 HETDTTLADFAADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
           N L +       ++       +LD+L   L+  +      + +    + +R+++      
Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEKQRVKILQHRLEALNPHSR 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+ ++   + ++ +   +         + +                             
Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  +Q  N   I     +  K  +
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESSAGIEEKDEL 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445


>gi|226949183|ref|YP_002804274.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A2
           str. Kyoto]
 gi|254783695|sp|C1FPB2|EX7L_CLOBJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|226843200|gb|ACO85866.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A2
           str. Kyoto]
          Length = 401

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 221/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F+PE G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFVPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K + VITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K + 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRSY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 47/101 (46%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K +L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKESLKKLNKINIIFKDGRAKLSI 395


>gi|315924278|ref|ZP_07920502.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622439|gb|EFV02396.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 397

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 117/359 (32%), Positives = 197/359 (54%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV+E++  +K ++ +N  L  + ++GE+S ++   +SGH YFSLKD  +RI  ++++  
Sbjct: 6   LSVTEVNRFVKTLIATNSVLKSLEIKGEVSNFK-RQASGHLYFSLKDVGARIGCVMFRSD 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              ++F PE+G+  +  G++  F  + +YQI + ++ P+G G L    E  K+ L   G 
Sbjct: 65  AAHLDFEPEDGMHVVCKGRVDVFEQAGQYQIYVRTMQPAGIGDLYRGFETLKRTLETLGY 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K  IP   + + V+TSPTGA I DI+     R P L +I+ P +VQG E    IA
Sbjct: 125 FDASAKKKIPETIEAVGVVTSPTGAAIHDIISVCHRRDPHLEIILAPAQVQGTEAGASIA 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           +AI QL+ L         D+II+ RGGGS+EDLW FN+ ++  AI  +  PIISA+GHET
Sbjct: 185 SAIQQLDQL------DSIDVIIVGRGGGSMEDLWAFNERIVADAIYKAKTPIISAVGHET 238

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ ADLR PTP+ AAE     ++ +   L +L+  L   + ++I      ++ + 
Sbjct: 239 DFTIADFVADLRVPTPSAAAETLTWDQQAVWHQLNDLQGILQQEVQQVIANHREAVDLIA 298

Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + L   N +  +   R  +D     L       + + +R  ++   ++ +    H +++
Sbjct: 299 RLLLAHNPEAMIDSQRMVIDYFQERLVQGGRQQLAQLHRALDNYRIKLVAFNPRHALKR 357



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 54/137 (39%), Gaps = 2/137 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKL 423
           +  ++Q +  +   ++ I++Q ++ +    +E + ++  L      +  I      I   
Sbjct: 261 LTWDQQAVWHQLNDLQGILQQEVQQVIANHREAVDLIARLLLAHNPEAMIDSQRMVIDYF 320

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R+      ++   H ++      L +F  ++ LKRG+  +   +   +    +  T  
Sbjct: 321 QERLVQGGRQQLAQLHRALDNYRIKLVAFNPRHALKRGFAWVHTESGELVRSVDHAKTAG 380

Query: 484 RILINFFDGQANAIVIN 500
            + ++F DG   A V  
Sbjct: 381 NLRLSFADGDVKAKVEQ 397


>gi|149176949|ref|ZP_01855558.1| exodeoxyribonuclease VII large subunit [Planctomyces maris DSM
           8797]
 gi|148844204|gb|EDL58558.1| exodeoxyribonuclease VII large subunit [Planctomyces maris DSM
           8797]
          Length = 409

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 209/364 (57%), Gaps = 11/364 (3%)

Query: 9   SLDHPE-YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           SL  PE  SV+E +  +K++VE+N  +  V GEIS       SGH Y +LKD+ +++ A+
Sbjct: 2   SLAEPEILSVTETTRQIKNLVEANFPYAWVVGEISNCTM-ARSGHVYLTLKDDSAQLRAV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           IWK T ++++F  E+G+E +  G +  +     YQ+ IE LIP G G L  A  + ++KL
Sbjct: 61  IWKRTASRLKFQIEDGMEVIAAGPVEVYQARGTYQLNIEQLIPQGVGALELAFRQMQEKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             EGLF+ +HK PIP  P+ IA++TSPT A +RD+LQ I+ R+    ++I PV VQG+  
Sbjct: 121 AAEGLFNPEHKQPIPQFPRKIALVTSPTSAAVRDMLQVITRRWKAADLVIVPVAVQGEGA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            ++IA  I     +      P  D II  RGGGS+EDLW FN+E++ RAI    IPIISA
Sbjct: 181 AEQIAAGIETAARI------PGVDTIITGRGGGSLEDLWAFNEEVVARAIFACPIPIISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D ++AD  AD RA TP+ AAE++VP++  + ++L + + +L   + +  +     
Sbjct: 235 VGHEIDISIADLVADRRALTPSEAAELSVPLQSDVLATLTHWQNQLATNLKQRARQVRLQ 294

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L+++     L      +     ++D L R L+ +   II R      H+ + + +   + 
Sbjct: 295 LDAIAGRPALTRPLDLVHQRAAQVDELDRRLKRSTREIISRYQTETRHLGSALDALSPLK 354

Query: 365 NIQK 368
            + +
Sbjct: 355 VLNR 358



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 38/139 (27%), Gaps = 8/139 (5%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   Q  +   +KQ  R + L+             +  + +      + +L  R++    
Sbjct: 273 LTHWQNQLATNLKQRARQVRLQLDAIAGR--PALTRPLDLVHQRAAQVDELDRRLKRSTR 330

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN------NFITQKRNLATKTRIL 486
             I    T        L + +    L RGY+  +          N +     +     + 
Sbjct: 331 EIISRYQTETRHLGSALDALSPLKVLNRGYSITRKETEDEPSTLNIVKSISQVKPGEVLH 390

Query: 487 INFFDGQANAIVINKAPPK 505
               DG   + +       
Sbjct: 391 TRISDGTIISQIQEIRKDS 409


>gi|291544836|emb|CBL17945.1| exodeoxyribonuclease VII, large subunit [Ruminococcus sp. 18P13]
          Length = 402

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 126/400 (31%), Positives = 210/400 (52%), Gaps = 13/400 (3%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           ++VSEL+ ++   +  ++ L  + +RGEIS +     SGH YF+LKD  S + A+++   
Sbjct: 4   FTVSELNRYIAFQLKGDARLQGILLRGEISNFTCYRKSGHCYFTLKDADSAVKAVMFASY 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
            +K+ F P +G+  + +G +  F     YQ+ +  L P G G    A  + K+KL   G 
Sbjct: 64  ASKLRFDPRDGMRVIAVGSVGVFERDGAYQVYVNDLQPDGVGANYIAFLQLKEKLSGLGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F +  K  +  +PK I VITSP GA ++DIL  I  R P+  V+++P  VQG++ P  IA
Sbjct: 124 FDEAAKQSLSALPKKIGVITSPEGAALQDILHIIGRRCPIAEVVVYPAMVQGEQAPGTIA 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ Q +           D++IL RGGGS EDL  FN E + +AI +  IP+ISA+GHET
Sbjct: 184 AAVQQASQS-------DCDVLILGRGGGSAEDLQAFNTEAVAKAIHDCPIPLISAVGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD  AD+RAPTP+ AAE+AVP  E L++ +  L  RL + +   +     +L +L 
Sbjct: 237 DYTIADLTADMRAPTPSAAAELAVPTMEQLRNGVDALNHRLADGMEHRLSQAERSLQALR 296

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           + L   + +  L+  + RL+++   L  +    I R+       + R+ S   +  + + 
Sbjct: 297 QRLAVCSVEGRLNLWQERLEQMQNRLNQSAANGIARREAQLMQQLARLDSLSPVKVLTRG 356

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
              ++  +  +   V+Q      L  +     +  + +  
Sbjct: 357 -YALVYHENKLITSVQQAAPGDELHIRLGDGEIQAVVQAP 395



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 3/133 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++ R  +      +        R    E+  +     +     + R+      ++++  
Sbjct: 263 MEQLRNGVDALNHRL--ADGMEHRLSQAERSLQALRQRLAVCSVEGRLNLWQERLEQMQN 320

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+    ++ I      +      L S +    L RGY  +   N   IT  +  A    +
Sbjct: 321 RLNQSAANGIARREAQLMQQLARLDSLSPVKVLTRGYALVYHEN-KLITSVQQAAPGDEL 379

Query: 486 LINFFDGQANAIV 498
            I   DG+  A+V
Sbjct: 380 HIRLGDGEIQAVV 392


>gi|331269443|ref|YP_004395935.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum
           BKT015925]
 gi|329125993|gb|AEB75938.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum
           BKT015925]
          Length = 401

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 126/376 (33%), Positives = 210/376 (55%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SVSEL+ ++K I++++    +  ++GEIS ++  H+SGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLSVSELNIYIKRIIDNDFILKNTQIKGEISNFKF-HNSGHVYFSLKDKQSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     + F+P  G   ++ G+++ +     YQ   E +   G G L  A EK KKKL
Sbjct: 60  MFRSYTENLNFIPNNGDNVIIKGRVSVYQKDGVYQFYCEEIEKEGIGDLFIAFEKSKKKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF + +K  IP   K I VITS TGA I+DI+     R   + ++I+P  VQG+  
Sbjct: 120 YEEGLFDEGYKKRIPLYSKKIGVITSTTGAAIKDIINVSKRRNRGIEILIYPSLVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I  L++          D+II+ARGGGSIE+LW FN+E +   I   S PIIS 
Sbjct: 180 SDNLIQGIKYLDSR------DDVDLIIIARGGGSIEELWAFNNEALAYEIYRCSTPIISG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D+RAPTP+ AAE+AV   E +  ++ N + +L N+I  ++  ++  
Sbjct: 234 VGHETDFTICDFVSDMRAPTPSAAAELAVCNLEEINGNIENYKEKLYNLIKHIMNLQLKQ 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LNS   A+   N   T+     +++ L  +L H ++  I  +    + + + + +   ++
Sbjct: 294 LNSYENAIKVNNPLNTIVNEYIKVENLKNKLCHEIQSKIEYEKIKLSKVNSLLNAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            + K    I ++  +I
Sbjct: 354 ILSKGFSIIQDEMNNI 369



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 2/140 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+++   +I   ++ +  ++K  +     +       + +      N I   +  ++ L 
Sbjct: 264 NLEEINGNIENYKEKLYNLIKHIMNLQLKQLNSYENAIKV--NNPLNTIVNEYIKVENLK 321

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            ++   +  KI+     +S    +L +    N L +G++ IQD  NN I+ K N+     
Sbjct: 322 NKLCHEIQSKIEYEKIKLSKVNSLLNAHNPLNILSKGFSIIQDEMNNIISTKDNINKDDC 381

Query: 485 ILINFFDGQANAIVINKAPP 504
           I I F DG+    V     P
Sbjct: 382 IKITFKDGETKVKVSEVYKP 401


>gi|110803541|ref|YP_699105.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens
           SM101]
 gi|123341678|sp|Q0SS02|EX7L_CLOPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|110684042|gb|ABG87412.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens
           SM101]
          Length = 400

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 202/375 (53%), Gaps = 12/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++K +VE++    ++ V+GEIS  +  HSSGH YFSLKD +S+++ I
Sbjct: 1   MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  EEG++  +  ++  +     YQ+  E++  +G G L     K KK+L
Sbjct: 60  MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEG+F +++K  +P  PK I +IT+ TGA +RDI+  I  R   L +I++P KVQG+  
Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITAKTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I   N           D+IIL RGGG IE+LW FN+  +   I NS IP +SA
Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGFIEELWAFNNRDLAYEIFNSRIPTVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RAPTP+ A E+  P  + + + L+N +  L+  I R        
Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAIDRKFLNAKRD 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           ++ L K L   N    +      ++ L  +L    +  I +       + + +++   ++
Sbjct: 294 VDLLYKGLKGNNPKDIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353

Query: 365 NIQKNRQHILEKQQH 379
            + +    I++K+  
Sbjct: 354 TLGRGYSVIMDKEDK 368



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+    +L K++ + + + +  +++  ++   +    +     K+ I      +  L  
Sbjct: 265 LQEMINDLLNKKEFLHRAIDR--KFLNAKRDVDLLYKGLKGNNPKDIIEKRIKEVNSLEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++ F+   KI      +     ILQ+    NTL RGY+ I D  +  I     L     +
Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINNVSELKKNDMV 382

Query: 486 LINFFDGQANAIVI 499
            +   DG  N  + 
Sbjct: 383 KVIMKDGSVNIDIK 396


>gi|149928090|ref|ZP_01916337.1| exodeoxyribonuclease VII large subunit [Limnobacter sp. MED105]
 gi|149823176|gb|EDM82413.1| exodeoxyribonuclease VII large subunit [Limnobacter sp. MED105]
          Length = 455

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/491 (23%), Positives = 207/491 (42%), Gaps = 58/491 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +SVS+L+ HL   + +    + ++GE++ +    SSGH Y +LKD  +++ A++++   
Sbjct: 7   VFSVSQLARHLNDHLRNEFGAIRIQGEVASFT-RASSGHWYLALKDESAQMKAVMFRQRN 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
               F P  G +  V+ ++  +    + Q+I++ +  +G G L     + K KL +EGLF
Sbjct: 66  VLAGFFPAVGDKVEVLAQLAMYEQRGELQLIVDVMKKAGQGNLHEQYLQLKTKLTQEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+P +   + V+TS   A + D+ Q ++ R P +   ++   VQG++   +I  
Sbjct: 126 DSARKRPLPSVVFNLGVVTSLQAAALADVKQALARRAPHVEFSVYHTAVQGEQAAAQIIE 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+ + ++          + ++L RGGGS+EDLW FN E +VRA+A    PI+  +GHETD
Sbjct: 186 ALRKADSAGH-------EALVLCRGGGSLEDLWSFNVEAVVRAVAACKTPIVVGVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TLA++AADLRA TPT AAE+       L + +  L   L   +    +  +  ++    
Sbjct: 239 VTLAEFAADLRAATPTAAAELISRPTRELLAEIQGLHVGLRKALRHRAQMLVQRVDRAEL 298

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L      L+    RL      L   +E  I  +      +             +     
Sbjct: 299 GLLTPTAYLNTLESRLGHASSRLPRLVERGIAEETNAIQAL------------WESMSFE 346

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   Q    +  +     +   ++  IA L                              
Sbjct: 347 MSATQNAATRSAQLLESRLMAVQRHNIAALD----------------------------- 377

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFD 491
                  + V     ++++ + + TL+RGY  +Q  +    +    ++     +     D
Sbjct: 378 -------SRVDRLGSVVEAVSPQRTLERGYAFLQPQHGDAVVRSVADVQAGDALRATLAD 430

Query: 492 GQANAIVINKA 502
           G+    V  K 
Sbjct: 431 GEILVNVREKT 441


>gi|168184571|ref|ZP_02619235.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Bf]
 gi|237795300|ref|YP_002862852.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum Ba4
           str. 657]
 gi|259646286|sp|C3KXC6|EX7L_CLOB6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|182672368|gb|EDT84329.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Bf]
 gi|229262295|gb|ACQ53328.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Ba4
           str. 657]
          Length = 401

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F PE G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K + VITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDS 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            K +   I  LN +++       DIIILARGGGSIE+LW FN+E +  ++ NS  PII+ 
Sbjct: 180 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEELAYSVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++    + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNDLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 45/101 (44%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+      +S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNDLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSI 395


>gi|160893230|ref|ZP_02074018.1| hypothetical protein CLOL250_00776 [Clostridium sp. L2-50]
 gi|156865313|gb|EDO58744.1| hypothetical protein CLOL250_00776 [Clostridium sp. L2-50]
          Length = 401

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 124/363 (34%), Positives = 197/363 (54%), Gaps = 14/363 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+V +++ ++K+++ S+  L  + V+GE+S  +  HSSGH YFSLKD    I A+
Sbjct: 1   MAKKSYTVGQVNGYIKNLISSDYLLGDIYVKGEVSNCK-YHSSGHIYFSLKDETGSIMAV 59

Query: 68  IWKGTL-NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++K    + ++F  E G + +  G +  +    +YQ+ ++ +   G G L    E+ K+K
Sbjct: 60  MFKSYAYSGLDFKLENGQQVVCHGSVNIYERDGRYQLYVKEIKLDGIGNLYERYEQLKQK 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L E+GLF    K PIP  PK + ++T+ TGA I+DI      R P +++I++PVKVQGD 
Sbjct: 120 LYEQGLFEFDIKKPIPAYPKRVGIVTAQTGAAIQDIRNIAKRRNPYVQLILYPVKVQGDG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             ++IA+ I  L+ +         D II+ RGGGSIEDLW FN+E++  AI ++  PIIS
Sbjct: 180 AAEDIAHGIEVLDNM-------GVDTIIIGRGGGSIEDLWAFNEEVVAWAIYHAKTPIIS 232

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
             GHE D T+ADYAADLRAPTP+ A E A+P        +IN   +++ ++ R +     
Sbjct: 233 GTGHEIDNTIADYAADLRAPTPSAACEQAIPDVMSTVHQVINQGRQMDYLMKRRLAAYQE 292

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L +  + L   N  Q L+  +  LD L   L   ++    R       +  R+      
Sbjct: 293 KLQAAERHLRILNPKQRLAQQQIYLDDLSDRLNRAMKNKYDRYEHRVMLLAERLHGLSPS 352

Query: 364 HNI 366
             +
Sbjct: 353 AKL 355



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 2/151 (1%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK-KEKIAILHMLREQTKN 411
           +     S      I      + +      Q+     R +   + K + A  H+     K 
Sbjct: 249 LRAPTPSAACEQAIPDVMSTVHQVINQGRQMDYLMKRRLAAYQEKLQAAERHLRILNPKQ 308

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
           R+     ++  L  R+   + +K       V +    L   +    L  G+  I+     
Sbjct: 309 RLAQQQIYLDDLSDRLNRAMKNKYDRYEHRVMLLAERLHGLSPSAKLINGFGYIE-KTGT 367

Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKA 502
            +T  + +    RI I   DG     V +  
Sbjct: 368 PVTTIKEIEKDDRITIRVHDGLIETRVTDVK 398


>gi|170754662|ref|YP_001781436.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum B1
           str. Okra]
 gi|226694644|sp|B1IMN8|EX7L_CLOBK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169119874|gb|ACA43710.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum B1
           str. Okra]
          Length = 403

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F  E G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDIKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EEGLF D HK  IP   K + VITSPTGAV++DI+     R   + ++I+P  VQG   
Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAVLKDIINVTKRRNKGIELLIYPALVQGTNA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395


>gi|269215507|ref|ZP_06159361.1| exodeoxyribonuclease VII, large subunit [Slackia exigua ATCC
           700122]
 gi|269130994|gb|EEZ62069.1| exodeoxyribonuclease VII, large subunit [Slackia exigua ATCC
           700122]
          Length = 476

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/496 (22%), Positives = 196/496 (39%), Gaps = 37/496 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              + V+E    +   + S    V + GE+S           YF++KD  S +  ++W  
Sbjct: 15  RKPFGVTEAIARMNGYL-SGFPLV-ILGEVSEVNAKRGYSAVYFTIKDQKSSLPCMMWNT 72

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              +       G++  V G+   +    +      S   +G G L   ++   + L  EG
Sbjct: 73  IYERTS-GLRVGMKIEVAGQFDIYAPKGRMSFKASSFKIAGEGNLRQKVDALARALRSEG 131

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           L  D  K P+P  P+ + V+TSP G  +RD+L+ +  RFPL  V +  V V+G    + +
Sbjct: 132 LMDDARKRPVPRFPEKVCVVTSPRGDAVRDVLRTLRRRFPLATVSVAGVPVEGKTAAEGM 191

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+               D+I+L RGGGS EDL  FNDE + RA+A S +P+++ IGHE
Sbjct: 192 VRALAAC-------ALEGCDVILLVRGGGSFEDLMPFNDEALARAVAASPVPVVTGIGHE 244

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD  +D RA TPT AAE   P  E + +   +   RL+  +   ++     L+++
Sbjct: 245 PDTTIADMVSDHRASTPTAAAEAVSPSPEQMNALFASYAERLSGPLGHRLERTRIRLDAV 304

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                  D                       +I       +   +R+       ++ +NR
Sbjct: 305 AGRPVFRDSA--------------------ALIAEDLMRLDMASDRLHRALP-ESLARNR 343

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             +   +  + + V    R   LE  +       L    K  + +          R+  I
Sbjct: 344 TSLDAYEGRLRRSVSFDARRTRLESMQ-----TRLNASGKRILDHEAAAFGSATERMRAI 398

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
            +    +    +++    L   +  + L RGY    D + + +         + I +   
Sbjct: 399 GATLTSAARHDLALRAGHLHDLSPLSILSRGYAMATDKDGHVVKHADAGLVGSAIKVRVS 458

Query: 491 DGQANAIVINKAPPKE 506
           DG  +  V + +  + 
Sbjct: 459 DGVLDCSVESVSQERR 474


>gi|87307780|ref|ZP_01089923.1| exodeoxyribonuclease VII large subunit [Blastopirellula marina DSM
           3645]
 gi|87289394|gb|EAQ81285.1| exodeoxyribonuclease VII large subunit [Blastopirellula marina DSM
           3645]
          Length = 417

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 128/369 (34%), Positives = 199/369 (53%), Gaps = 9/369 (2%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P  +      P  +V++L+  +K  +E+    V V GEIS       SGH Y +LKD+ +
Sbjct: 6   PSWEAAGEKPPVLTVAQLTALIKGTLETAFPAVWVSGEISNL-AQPRSGHIYLTLKDDAA 64

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I A++WKGT +K+ F  E+G + +  G +  +     YQ++I  + P G G L  AL+K
Sbjct: 65  QIRAVMWKGTASKLNFDLEDGQQVICRGDLDVYAPRGSYQLVIRQIEPQGVGALQLALQK 124

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL  EGLF    K P+P  P+ I V+TSPTGA IRD L+ +  R+    V++ P +V
Sbjct: 125 LQQKLAAEGLFDPGLKRPLPRFPRRIVVVTSPTGAAIRDFLEVLRRRWRGADVLVIPTRV 184

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     EIA AI +   L      PR D+++  RGGGS+EDLW FN+E +VRAIA   I
Sbjct: 185 QGAGAAAEIAAAIKKAAKL-----RPRADVLVATRGGGSMEDLWCFNEEPVVRAIAECEI 239

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D TL+D AAD+RA TP+ AAE+ VP +  +  +L N   RL+  + +  +
Sbjct: 240 PVISAVGHEIDVTLSDLAADVRALTPSEAAELCVPSQSEVSEALDNYRVRLSQSLRQRAQ 299

Query: 302 YKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                L+  +  +A       +  ++  LD     L   +   +    +       R+++
Sbjct: 300 MARRRLDALAERRAFIRPFSLVHDAQRLLDGWDERLLAAMRRQLQVNQQRVRQTTARLEA 359

Query: 360 DFLIHNIQK 368
              +  + +
Sbjct: 360 LSPLAVLAR 368



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 49/138 (35%), Gaps = 2/138 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +  + Q ++Q  +               +R    + +      +     R+   
Sbjct: 281 EALDNYRVRLSQSLRQRAQMARRRLDALAERRAFIR--PFSLVHDAQRLLDGWDERLLAA 338

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++     V  TT  L++ +    L RGY+  ++ +   + +  ++A    I     
Sbjct: 339 MRRQLQVNQQRVRQTTARLEALSPLAVLARGYSVTRNLDGGVLKKAEDVAVGDEIETILP 398

Query: 491 DGQANAIVINKAPPKEQP 508
            G+  + V +    +++ 
Sbjct: 399 SGRLTSRVESVDSEQKKA 416


>gi|304436642|ref|ZP_07396611.1| exodeoxyribonuclease VII large subunit [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304370338|gb|EFM23994.1| exodeoxyribonuclease VII large subunit [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 402

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 126/358 (35%), Positives = 200/358 (55%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+++ ++K + E    LS + +RGE+S Y+     GHAYF+LKD  S +  +++ G  
Sbjct: 5   SVSDVTRYIKGMFEHEPILSDLLIRGEVSNYKRYPL-GHAYFTLKDAGSSMKCVMFNGYA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +  G I+ +     YQ+ +  L P G+G L  A E+ + +L  EGLF
Sbjct: 64  RNLRFAPENGMQVIAGGNISVYERDGAYQLYVSFLTPEGAGALALAFEQMRDRLAAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
            + HK P+P  P+ I ++TS  GAV+RDI      R+P +++I+ PV VQG    ++IA+
Sbjct: 124 DEGHKQPLPRFPRRIGIVTSSAGAVLRDIHNVSKRRWPGVQLILHPVLVQGAGAAEQIAD 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+   N           D++I+ RGGGS EDLW FN+E++VRA+  S IP+ISA+GHETD
Sbjct: 184 AVAFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEVVVRAVYRSRIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL D+ +D RA TP+ AAE AVP    ++  L+ L ARL+    R I + +  L++L++
Sbjct: 238 TTLVDFVSDRRAATPSQAAEFAVPDAAEMERFLMGLRARLDAGRKRQIDHAVARLSTLVQ 297

Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                N    ++    R DR   EL    +            ++ R++    +  + +
Sbjct: 298 RPWCTNPRMLIAPLMQRSDRATAELHRAAKEQSVAARHRLELVLKRLELLNPVRVLYR 355



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 49/134 (36%), Gaps = 3/134 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  + ++  +  ++   K+ + +        +          +  I  L     +    
Sbjct: 264 AEMERFLMGLRARLDAGRKRQIDHAVARLSTLVQR--PWCTNPRMLIAPLMQRSDRATAE 321

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +      +  +    + +  + L+       L RG++ ++  +   +++ +++    R+ 
Sbjct: 322 LHRAAKEQSVAARHRLELVLKRLELLNPVRVLYRGFSIVE-KDGRAVSRVKDVTAGDRVN 380

Query: 487 INFFDGQANAIVIN 500
           I F DG+ +A+V  
Sbjct: 381 ITFADGKISAVVEQ 394


>gi|167758088|ref|ZP_02430215.1| hypothetical protein CLOSCI_00426 [Clostridium scindens ATCC 35704]
 gi|167663985|gb|EDS08115.1| hypothetical protein CLOSCI_00426 [Clostridium scindens ATCC 35704]
          Length = 403

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    Y+V +++ ++K++   +  L+ + V+GE+S  +  H+SGH YFSLKD    I  +
Sbjct: 1   MTRNVYTVKQVNAYIKNMFTQDYMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G    + F   EG + +V+G +  +  S  YQ+  + +   G G L    +  KK+L
Sbjct: 60  MFAGQRGGLSFRMSEGQQIVVLGSVNVYERSGSYQLYAKEIRLDGDGLLYERFQMLKKEL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            E G+F+ ++K PIP     I V+T+PTGA +RDI+     R P +++I++P +VQG+  
Sbjct: 120 EEMGMFAPEYKKPIPSFASRIGVVTAPTGAAVRDIMNIAGRRNPYVQLILYPAQVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + I   I  L            D++I+ RGGGSIEDLW FN+E + RAI   S+P+ISA
Sbjct: 180 KESIVRGIRMLEA-------YGVDVMIVGRGGGSIEDLWAFNEEEVARAIFECSVPVISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+ADYAADLRAPTP+ AAE+AV     +Q  +     R+N ++ + I+     
Sbjct: 233 VGHETDTTIADYAADLRAPTPSAAAELAVYDYRQVQMGMQEYRLRMNRLLNQKIQVARLK 292

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L      L   +    L   + RL  +   ++  +E  +          +  +K    + 
Sbjct: 293 LREYHTRLKYLHPRLKLQEQQQRLSEMEDRMKMLMEGKVRDARHRMALYVEVMKGLSPLQ 352

Query: 365 NIQK 368
            +  
Sbjct: 353 KLSH 356



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 5/139 (3%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +Q   Q    +   +     Q  R    E   ++  LH      + ++      + ++
Sbjct: 265 RQVQMGMQEYRLRMNRLLNQKIQVARLKLREYHTRLKYLH-----PRLKLQEQQQRLSEM 319

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R++ ++  K++     +++   +++  +    L  GY  ++  +   I   R +  + 
Sbjct: 320 EDRMKMLMEGKVRDARHRMALYVEVMKGLSPLQKLSHGYAYVEGRDKKAIKSIRQVRNQD 379

Query: 484 RILINFFDGQANAIVINKA 502
           R+ I   DG   A V +  
Sbjct: 380 RLSIYVTDGILQATVEDVK 398


>gi|331091279|ref|ZP_08340120.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404726|gb|EGG84265.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 411

 Score =  283 bits (723), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 132/397 (33%), Positives = 219/397 (55%), Gaps = 13/397 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSV +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    +  I++
Sbjct: 2   RNVYSVKQVNSYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTLACIMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F   EG + +V+G +TT+    KYQ+  + +I  G+G L    E  KK+L E
Sbjct: 61  AGQRAGLTFRMREGQQVIVLGSVTTYERDGKYQLYAKEIILDGAGLLYEKFEALKKELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIPF  K I ++T+PTGA IRDI+   S R P +++I++P  VQG +  +
Sbjct: 121 MGMFAPEYKQPIPFYAKRIGIVTAPTGAAIRDIMNIASRRNPYVQLILYPALVQGKDASE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L            D+II+ RGGGSIEDLW FN+E + RAI N ++PIISA+G
Sbjct: 181 SIIKGIGMLEA-------KGVDLIIVGRGGGSIEDLWAFNEESVARAIFNCAVPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NT 306
           HETD T+ADY ADLRAPTP+ AAE+AV     L+ ++ + E +L   + + +  K     
Sbjct: 234 HETDTTIADYVADLRAPTPSAAAELAVTEYSRLEETMYDYEVQLKRNLRQFLAAKRLLLR 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
             ++          L   R +L  +  +++  ++  + R   +F   +  +K+   +  +
Sbjct: 294 QYAIRMKYLQPYNRLREQRQQLINMEEKIQSLMQKKLDRAKYNFAVRLENMKALSPLQKL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            +   ++ ++     + VKQ  +   L+ + K  IL+
Sbjct: 354 NQGFGYVTDESGKTVKSVKQTEKGNTLKIQMKDGILY 390



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + + + +  +++ ++Q L    L  ++    +  L  Q  NR+      +  +  +I
Sbjct: 265 RLEETMYDYEVQLKRNLRQFLAAKRLLLRQYAIRMKYL--QPYNRLREQRQQLINMEEKI 322

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           + ++  K+     + ++    +++ +    L +G+  + D +   +   +       + I
Sbjct: 323 QSLMQKKLDRAKYNFAVRLENMKALSPLQKLNQGFGYVTDESGKTVKSVKQTEKGNTLKI 382

Query: 488 NFFDGQANAIVINKA 502
              DG   A V++KA
Sbjct: 383 QMKDGILYAKVMDKA 397


>gi|251779136|ref|ZP_04822056.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243083451|gb|EES49341.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 399

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 125/376 (33%), Positives = 217/376 (57%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K +++++   +++ V+GEIS  +  HSSGH YFSLKDN+S+++ +
Sbjct: 1   MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   + +    E+G+E +V G+ + +  +  +Q+  + +   G G L    E  K+KL
Sbjct: 60  MFKSKASLLNIALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            + G F +++K  IP   K I V+TS TGAVIRDI+     R P + +I++P KVQGD+ 
Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGVVTSSTGAVIRDIINVTKRRNPLVDIILYPAKVQGDDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            KEI   I   N           D+II+ RGGGSIE+LW+FN+E + + I NS +PIISA
Sbjct: 180 YKEIIAGIEYFNK------KKNIDLIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RA TP+ AAE+AV +   +   + ++   L++ I + +K   + 
Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVSLLSDINQRIYDISKSLDDEIQKKLKDCKSR 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L S  + L   +    +  S   +D+L   L   ++I I R+ +    + N + ++  I 
Sbjct: 294 LESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353

Query: 365 NIQKNRQHILEKQQHI 380
            + K    I ++  +I
Sbjct: 354 VLNKGYAIIEDENNNI 369



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +     +      ++I   +  + KL  R+ F +  KIK     +     +L +    
Sbjct: 293 RLESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
             L +GY  I+D NNN I +   L  +  I I+  DG   
Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISISLSDGNIK 392


>gi|187934773|ref|YP_001886593.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum B
           str. Eklund 17B]
 gi|226694643|sp|B2TRM8|EX7L_CLOBB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|187722926|gb|ACD24147.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum B
           str. Eklund 17B]
          Length = 399

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 125/376 (33%), Positives = 215/376 (57%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K +++++   +++ V+GEIS  +  HSSGH YFSLKDN+S+++ +
Sbjct: 1   MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K   + +    E+G+E +V G+ + +  +  +Q+  + +   G G L    E  K+KL
Sbjct: 60  MFKSKASLLNIALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            + G F +++K  IP   K I ++TS TGAVIRDI+     R   + +I++P KVQGD  
Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGIVTSSTGAVIRDIINVTKRRNSLVDIILYPAKVQGDNA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            KEI   I   N           DIII+ RGGGSIE+LW+FN+E + + I NS +PIISA
Sbjct: 180 YKEIIAGIEYFNK------KKNIDIIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D+RA TP+ AAE+AVP+   + + +  +   L+  I + +K   + 
Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVPLLSDINTRIYEISKSLDYEIQKKLKDCKSR 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L S  + L   +    +  S   +D+L   L   ++I I R+ +    + N + ++  I 
Sbjct: 294 LESNERILKLHSPISKIVNSYLEIDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353

Query: 365 NIQKNRQHILEKQQHI 380
            + K    I ++  +I
Sbjct: 354 VLNKGYAIIEDENNNI 369



 Score = 87.5 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +     +      ++I   +  I KL  R+ F +  KIK     +     +L +    
Sbjct: 293 RLESNERILKLHSPISKIVNSYLEIDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
             L +GY  I+D NNN I +   L  +  I ++  DG   
Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISVSLSDGNIK 392


>gi|284800113|ref|ZP_06390542.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703]
 gi|284795977|gb|EFC51324.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703]
          Length = 310

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/321 (35%), Positives = 179/321 (55%), Gaps = 13/321 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+     +S+     SVSEL+   K ++E +L+ + + GE+S      +SGH YFSLKD+
Sbjct: 1   MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   ++KG   ++    +EG    V G+I+ +    ++QI +  +   G G L  A 
Sbjct: 55  RAQVRCAMFKGAAMRLAKPLKEGDHIEVSGRISIYEARGEFQITVNEVRLKGLGQLYEAY 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K +L  EG FS + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P 
Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +IA AI   +   E       D++I+ RGGGSIEDLW FN+E +VRAI   
Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+  P ++     L   + RL  +    
Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVFGAT 288

Query: 300 IKYKINTLNSLLKALPNSDQT 320
           +         +  A P+    
Sbjct: 289 LFRCQPKTRLVGAANPSPAPK 309


>gi|194334664|ref|YP_002016524.1| exodeoxyribonuclease VII large subunit [Prosthecochloris aestuarii
           DSM 271]
 gi|194312482|gb|ACF46877.1| exodeoxyribonuclease VII, large subunit [Prosthecochloris aestuarii
           DSM 271]
          Length = 411

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 133/349 (38%), Positives = 201/349 (57%), Gaps = 6/349 (1%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               SVSEL+ ++K+ +ES    V VRGEIS +R + +SGH Y +LKD  ++I A+IWK 
Sbjct: 2   QQILSVSELTLNIKNRLESAFPTVTVRGEISNFR-LPASGHIYMTLKDEDAQIPAVIWKN 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++     +G+E +  G++  +P S +YQ+I  SL  +G G L  A     +KL   G
Sbjct: 61  VRLRLPAELRDGMEIIAAGRLEVYPPSGRYQLICTSLTLAGEGMLQQAFAMLLQKLAAAG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F+ +HK P+P  P+ IA++TSPTGAVI+D+   +S RFP   ++++PVKVQG+     I
Sbjct: 121 YFNVEHKKPLPAYPETIALVTSPTGAVIKDMGDVLSRRFPAASLLLYPVKVQGEGAVNNI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +A+   NT    +   RPD+II+ARGGGS+EDL  FN+E +  AI +SSIP+ISA+GHE
Sbjct: 181 IDALEYFNTTTVDQ--HRPDLIIVARGGGSLEDLQAFNEERVAMAIFHSSIPVISAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN-- 308
           TD+T+AD  AD+RA TP+ AAE+AVP KE L   +  L  R  + +   I      ++  
Sbjct: 239 TDFTIADMVADVRAGTPSIAAEIAVPDKEELLQKINTLAQRQLSSLNTRIDGAEREIDSL 298

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +   A              +  +   +  +L+  I    + F+    R+
Sbjct: 299 TGSYAFNRPKVLCKQLDAEITTIIGFMSRSLKGRIEHIEQRFSAAEGRL 347



 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427
           ++ +L+K   + Q     L       + +I  L       + K     L   I  +I  +
Sbjct: 266 KEELLQKINTLAQRQLSSLNTRIDGAEREIDSLTGSYAFNRPKVLCKQLDAEITTIIGFM 325

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L  +I+      S     L    Y+N L+RG+  I+  +  +IT  R++A K R   
Sbjct: 326 SRSLKGRIEHIEQRFSAAEGRLSLLDYRNVLRRGFALIKTESG-YITTSRDMARKKRASA 384

Query: 488 NFFDGQA 494
            F+DG+ 
Sbjct: 385 VFYDGEI 391


>gi|325265402|ref|ZP_08132126.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. D5]
 gi|324029403|gb|EGB90694.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. D5]
          Length = 406

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 114/362 (31%), Positives = 203/362 (56%), Gaps = 13/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              Y+V +++ ++K++   +   + + V+GE+S  +  H+SGH YFSLKD    +  +++
Sbjct: 2   RNVYTVKQVNAYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTMACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G+ + + F  +EG + +V+G ++ +    +YQ+  + +I  G+G L    E  K++L E
Sbjct: 61  AGSRSGLSFRMQEGQQVIVLGSVSVYERDGRYQLYAKEIILDGAGLLYEKFEALKRELQE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIP   + + ++T+PTGA +RDI+   + R P +++I++P +VQG+    
Sbjct: 121 MGMFAREYKQPIPAYVRTVGIVTAPTGAAVRDIINIATRRNPYVQLILYPAQVQGEGAAA 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I       E       D++I+ RGGGSIEDLW FN+E + RA+ +  +P+ISA+G
Sbjct: 181 SIVRGI-------ETLEKKGVDVMIVGRGGGSIEDLWAFNEEEVARAVFHCRVPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NT 306
           HETD T+ DY ADLRAPTP+ AAE+AV        ++   EARL   +++ I  +   + 
Sbjct: 234 HETDTTITDYVADLRAPTPSAAAELAVYEYLGTAGAMREYEARLRRSMMQRISQERVNSR 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
             ++   L +  Q L   R R   L + L   +E  + ++   F   + ++K    +  +
Sbjct: 294 QAAMKLKLAHPRQKLLEKRQRAVDLEQRLRILMEGCLEKRRHQFAIYVEQMKGLSPLAKL 353

Query: 367 QK 368
            +
Sbjct: 354 NQ 355



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 2/139 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + E +  + + + Q +    +  ++  A + +     + ++         L  R+  ++ 
Sbjct: 270 MREYEARLRRSMMQRISQERVNSRQ--AAMKLKLAHPRQKLLEKRQRAVDLEQRLRILME 327

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             ++      +I    ++  +    L +GY+ +Q      I   R +     I +   DG
Sbjct: 328 GCLEKRRHQFAIYVEQMKGLSPLAKLNQGYSYVQGDRGINIKSVRQVKQGDSIRVYMTDG 387

Query: 493 QANAIVINKAPPKEQPTKK 511
              A V       +   ++
Sbjct: 388 SVQAEVREIEEEPDGRKEE 406


>gi|330838908|ref|YP_004413488.1| Exodeoxyribonuclease 7 large subunit [Selenomonas sputigena ATCC
           35185]
 gi|329746672|gb|AEC00029.1| Exodeoxyribonuclease 7 large subunit [Selenomonas sputigena ATCC
           35185]
          Length = 400

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 131/358 (36%), Positives = 202/358 (56%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS L+ ++K +  VE  L +V V GE+S Y+   +SGH YF+LKD  + +  +++K   
Sbjct: 5   SVSALTQYIKSMFQVEGLLRNVSVEGELSNYKMY-ASGHCYFTLKDETASLKGVMFKSRA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +  G+++ +     YQ+ +E L+P G+G L  A E+ K +L  EGLF
Sbjct: 64  RLLRFQPENGMKVVATGEVSVYERDGVYQLYVERLLPVGAGELSVAFEQLKARLAAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192
           ++ HK P+P  P+ I ++TS +GAV+RDI +    R   +R++++P  VQG+    EIA 
Sbjct: 124 NEDHKKPLPPFPRTIGIVTSLSGAVLRDIYRVSKRRDANIRLVLYPTLVQGEGAAAEIAA 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS EDLW FN+E +VRAI +S IP+ISA+GHETD
Sbjct: 184 AIRFFNEKYP------VDLLIVGRGGGSAEDLWAFNEEPVVRAIYDSVIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL+DYA+D+RA TP+ AAE+AVP    L   +   E RL   +   + Y+   +  L  
Sbjct: 238 TTLSDYASDVRAATPSQAAELAVPETAALFRRIGECEMRLQKAVKSRLYYERERVERLGG 297

Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                     L+  R RLD     L+  +   +  K   F     +++    +H I++
Sbjct: 298 FFLKRPPQALLADRRQRLDMAAEALDRGMRRALLEKQHAFRVAAEKLEMLNPLHVIRR 355



 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I E +  +++ VK  L Y     +        L+   +  +      +      ++  
Sbjct: 268 RRIGECEMRLQKAVKSRLYYERERVERLGG--FFLKRPPQALLADRRQRLDMAAEALDRG 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +     +  +    L+     + ++RGY+ ++  +   +   + LA    IL+   
Sbjct: 326 MRRALLEKQHAFRVAAEKLEMLNPLHVIRRGYSVVE-KDGAAVRSVKELAAGDGILVRLA 384

Query: 491 DGQANAIVIN 500
           DG  +A+V  
Sbjct: 385 DGSFDAVVGG 394


>gi|307718646|ref|YP_003874178.1| exodeoxyribonuclease VII large subunit [Spirochaeta thermophila DSM
           6192]
 gi|306532371|gb|ADN01905.1| exodeoxyribonuclease VII, large subunit [Spirochaeta thermophila
           DSM 6192]
          Length = 418

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 10/374 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S+    +SVSEL+  +K  +E    +V V+GEIS  R   S+GH YFSLKD  + ++ ++
Sbjct: 2   SIPQKVFSVSELTSLIKGYLEDAFPYVAVQGEISNCR-PSSTGHLYFSLKDERAVLNVVM 60

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++    ++ F P++G+  L  G ++ +     YQ++ E L   G G +L  LEKRK++L 
Sbjct: 61  FQSRYRRLSFQPKDGMMVLAKGALSVYEARGAYQLVCEELEQVGMGAILEMLEKRKQRLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
            EGLF  + K PIP  P  IAV+TSPTGA IRDI+  ++ R   + +++ P  VQG+   
Sbjct: 121 AEGLFDKERKRPIPLFPSRIAVVTSPTGAAIRDIINVLTRRNAGVDIVVVPAPVQGENAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             IA  I +             D+II+ARGGGSIEDL  F++E++VRAIA    P+ISA+
Sbjct: 181 PIIAEQIRR------ADLWRLGDVIIVARGGGSIEDLLPFSEEVVVRAIAACETPVISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D++L+D AADLRAPTP+ AAEM    +E L   + +    +      L +      
Sbjct: 235 GHEIDYSLSDLAADLRAPTPSAAAEMVSAHREELLQRVQHAHLTVVRETRGLCERLRFRL 294

Query: 307 LNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                + L             R D   + +   +   +              ++      
Sbjct: 295 GKVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMRKYLITLRHRIEMAREITQAHSPRAV 354

Query: 366 IQKNRQHILEKQQH 379
           + +    + +    
Sbjct: 355 LSRGYAIVRDAATR 368



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 6/174 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + +   +++       +    H  E  Q ++      +R      +     L 
Sbjct: 236 HEIDYSLSDLAADLRAPTPSAAAEMVSAHREELLQRVQHAHLTVVRETRGLCERLRFRLG 295

Query: 404 MLREQTKNRIFYLH-----THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            + E+   R+F L+         +    I   +   + +    + +   I Q+ + +  L
Sbjct: 296 KVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMRKYLITLRHRIEMAREITQAHSPRAVL 355

Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
            RGY  ++D      +   R      R+ I    G+  A     APP+++    
Sbjct: 356 SRGYAIVRDAATREILRDTRTAFEGQRLSITLARGELEARTTQVAPPEDESATT 409


>gi|153941308|ref|YP_001391207.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum F
           str. Langeland]
 gi|166232354|sp|A7GEJ7|EX7L_CLOBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|152937204|gb|ABS42702.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum F
           str. Langeland]
 gi|295319243|gb|ADF99620.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum F
           str. 230613]
          Length = 401

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+L+ ++K+ ++++   ++  V+GEIS  + IHSSGH YFSLKD  S+I+ +
Sbjct: 1   MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     ++F PE G++ + +G ++ +     YQ+ ++ +   G G L  A EK K+KL
Sbjct: 60  MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            EE LF D HK  IP   K + VITSPTGA ++DI+     R   + ++I+P  VQG + 
Sbjct: 120 KEEELFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   I  LN +++       DIIILARGGGSIE+LW FN+E +  A+ NS  PII+ 
Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+AV  +E L + ++N +  + N +  +IK K N 
Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNYMENIIKEKRNY 293

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN   + +   +    +      +D L   L   +E  + ++  + + + + +++   ++
Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353

Query: 365 NIQKNRQHILEKQQHI 380
            ++K    I ++  ++
Sbjct: 354 VLKKGYTLIEDEGNNL 369



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            +    +      N I   + +I  L   +   +  K+     ++S  + +L++    N 
Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           LK+GYT I+D  NN IT+K  L    +I I F DG+A   +
Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395


>gi|291545447|emb|CBL18555.1| exodeoxyribonuclease VII, large subunit [Ruminococcus sp. SR1/5]
          Length = 383

 Score =  282 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/360 (31%), Positives = 183/360 (50%), Gaps = 13/360 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSV ++++++K++   +  L  V V+GE+S  +  H+SGH YFSLKD    +  +++
Sbjct: 2   RNVYSVGQVNHYVKNMFTQDYFLRKVYVKGEVSNCK-YHTSGHIYFSLKDETGTLSCVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F  ++G + +  G +  +    +YQ+  + +   G+G L       K++L +
Sbjct: 61  AGHRRGLAFRMKDGDKVVAGGIVDVYERDGRYQLYAKEITLEGAGALYERYLALKQELED 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIP     + V+T+PTGA ++DI      R P L+VI++P  VQG+   +
Sbjct: 121 MGMFAQEYKQPIPHFIHTLGVVTAPTGAAVQDIRNIAGRRNPYLQVILYPALVQGEGAAQ 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I  L+           D+II+ RGGGSIEDLW FN+E + RAI     P+ISA+G
Sbjct: 181 SIVKGIRMLDEA-------GVDVIIVGRGGGSIEDLWAFNEESVARAIFECRTPVISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ ADLRAPTP+ AAE+AV     +  S      RL   +    +     L 
Sbjct: 234 HETDFTIADFVADLRAPTPSAAAELAVDDFRSVLESFHMYGDRLQRAMNSKTELFAAKLK 293

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           +        + +  L   R     L   L  ++E  +  K       I R +    +  +
Sbjct: 294 AYENRFQYLSPESMLREKRQYASELEECLRSSMEQKLTEKRHELAIWIQRFEGLSPLRKL 353



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 10/111 (9%), Positives = 34/111 (30%), Gaps = 2/111 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +        +++ +         + K        L    ++ +     +  +L   +   
Sbjct: 268 ESFHMYGDRLQRAMNSKTELFAAKLKAYENRFQYL--SPESMLREKRQYASELEECLRSS 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +  K+      ++I  +  +  +    L  GY  + D   + +T+   +  
Sbjct: 326 MEQKLTEKRHELAIWIQRFEGLSPLRKLNGGYAFVSDLGGHAVTEISQIKK 376


>gi|241765692|ref|ZP_04763641.1| exodeoxyribonuclease VII, large subunit [Acidovorax delafieldii
           2AN]
 gi|241364440|gb|EER59548.1| exodeoxyribonuclease VII, large subunit [Acidovorax delafieldii
           2AN]
          Length = 441

 Score =  282 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 11/387 (2%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              +     + V  L   +   +E+  + V VRGEI+G+    SSGH YFS+KD + ++ 
Sbjct: 5   PTPATTPRVWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFSVKDANGQLR 63

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++   + ++F P +G    + G+I  +      Q I+ES+  +G G L     + K 
Sbjct: 64  CAMFRRAASLLDFSPRDGELVELRGRIGVYEARGDLQFIVESMQRAGQGALFEQFLRLKA 123

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF    K P+P  P+ I ++TSP  A + D++  +  R P + V++ P  VQG 
Sbjct: 124 QLEAEGLFDAARKRPLPLQPRGIGLVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGA 183

Query: 185 ECPKEIANAILQLNTLKEGR--------TCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             P+ I  A+ +L  + +          + P  D+I+L RGGG++EDLW FNDE + R +
Sbjct: 184 AAPQSIVAALSKLYQMAQAGLAHGADLASNPAIDVILLVRGGGAMEDLWAFNDEQVARTV 243

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
             S +P++  +GHETD+T+AD+ ADLRAPTPT AAE+    +E    +L  L  RL + +
Sbjct: 244 VQSPVPLVCGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGALGLLAGRLADGL 303

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            R I  +   L+     L      ++  + +L RL + + H + + + +       +   
Sbjct: 304 QRQIDARCQRLDQAAARLGRPSGIVARQQMQLARLAQRMRHGVLLKMQQLAHTQQALEGD 363

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQI 383
           + +      +  + + +      +E +
Sbjct: 364 LPAKV-QRRLALHAERLERAALRLELL 389


>gi|45358295|ref|NP_987852.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis
           S2]
 gi|44921053|emb|CAF30288.1| Exonuclease VII, large subunit:OB-fold nucleic acid binding domain
           [Methanococcus maripaludis S2]
          Length = 407

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 12/377 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +VSEL+ ++K  +E +      C++GEIS    +H SGH YF+LKD +S ID 
Sbjct: 8   SSFSNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCT-LHKSGHVYFTLKDENSAIDC 66

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++K    K++F P EG+  ++ GK++ +  + KYQ     +   G G L    +K K+K
Sbjct: 67  VMFKPYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEK 126

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L  EGLF++++K  IP  PK I +ITSPTGA IRDI++    R   + +II+P  VQG+ 
Sbjct: 127 LESEGLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGES 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K + + I +LN L       + D+II+ARGGGS+EDLW FN+E + RAI  S  P+I+
Sbjct: 187 AAKTVISGISELNKL------EKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVIT 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHETD+T++D+ +DLRA TP+ AAE+A+  +  L+S + NLE  L N +   I  +  
Sbjct: 241 GIGHETDFTISDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSY 300

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L   +   +    +   +  +D++  ++ H ++  I  + + F    + + +   +
Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPL 360

Query: 364 HNIQKNRQHILEKQQHI 380
           + + K    I ++ + I
Sbjct: 361 NVLNKGYSIIQDENEKI 377



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426
           N   +     ++E+++K  ++     +  ++ IL+  + +   K++I     H+ K+  +
Sbjct: 272 NEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIEKNSPKSKIEKQKVHVDKIRAQ 331

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + +KI         +  +L ++   N L +GY+ IQD N   I+ K +L  +  + 
Sbjct: 332 MNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLNLENDVK 391

Query: 487 INFFDGQANAIVI 499
           I   DG  +A + 
Sbjct: 392 ITLKDGTVDAHIT 404


>gi|291519196|emb|CBK74417.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 405

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 14/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   YSVS+++ +++ +   +    ++ + GE+S  +  H+ GH YF+LKD+ + I  +
Sbjct: 1   MNKNVYSVSQVNTYIERMFSDDFMLGNLSLSGEVSNCKYNHT-GHIYFTLKDDKAAISCV 59

Query: 68  IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++ G     + F  ++G + +V G +  +     YQ+    +   G G L    E  K +
Sbjct: 60  MFAGKRAKGLRFQMKDGDQIVVTGYVGVYKPYGTYQVYANEIELQGVGDLYQRFEALKAE 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L E G+F   +K P+P     I V+T+PTGA + DI++    R P + +I++P +VQG+ 
Sbjct: 120 LEESGMFDAMYKKPLPTHAMKIGVVTAPTGAAVHDIIRVSKTRNPYVSIILYPAQVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               + + I  L+ +         D+II+ RGGGSIEDLW FN+E + RAI N++ PIIS
Sbjct: 180 AVPSVVSGIQCLDEM-------DLDVIIVGRGGGSIEDLWAFNEEAVARAIFNANTPIIS 232

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHETD T+AD+ AD RA TP+ AAE+A  V +   + L     +L   +   I+    
Sbjct: 233 AVGHETDVTIADFVADRRAATPSQAAELANFVYQDFANQLSRYSDKLERNLDFKIQAYQE 292

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L    + L     +  +  +  RL  L   L++ + I + R       +  R+      
Sbjct: 293 RLMGFRQQLQLLRPENKIKANEERLKNLSMRLDNLIHIKLDRYENRLVALSGRLDGLSPA 352

Query: 364 HNIQ 367
             + 
Sbjct: 353 KKLA 356



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 2/129 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +      +E+ +   ++            L +LR   +N+I      +K L  R++ ++
Sbjct: 271 QLSRYSDKLERNLDFKIQAYQERLMGFRQQLQLLR--PENKIKANEERLKNLSMRLDNLI 328

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K+      +   +  L   +    L  G+  I D     +    +++    I I   D
Sbjct: 329 HIKLDRYENRLVALSGRLDGLSPAKKLAAGFGYITDGAGKRVDTVSSISVGDSINIRIKD 388

Query: 492 GQANAIVIN 500
           G+    V +
Sbjct: 389 GELITQVTD 397


>gi|330950773|gb|EGH51033.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae Cit 7]
          Length = 293

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/287 (37%), Positives = 173/287 (60%), Gaps = 10/287 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 16  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 74  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 134 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG E   +I  A+   ++          D +ILARGGGS+EDLW FN+E + RAI    
Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 246

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
            PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P    L   + +
Sbjct: 247 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDH 293


>gi|32267231|ref|NP_861263.1| exodeoxyribonuclease VII large subunit [Helicobacter hepaticus ATCC
           51449]
 gi|81835911|sp|Q7VFE5|EX7L_HELHP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|32263284|gb|AAP78329.1| exonuclease VII [Helicobacter hepaticus ATCC 51449]
          Length = 417

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 122/419 (29%), Positives = 206/419 (49%), Gaps = 10/419 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
             VSE++  +K I+ES    +CVRGEIS    IH+SGH Y +LKD  S +  +++KG   
Sbjct: 4   LEVSEINAQIKSILESTFMDICVRGEISNVT-IHTSGHIYLTLKDESSSVRCVMFKGNAR 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++   E G   L++G ++ +    +YQI+ +S+  +G G L  A E  K KL  +G F 
Sbjct: 63  NLKIKLEVGQSVLIMGSLSVYVPKGEYQILCKSITLAGLGELSQAYEALKTKLGAKGYFE 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
             HK P+P  PK IA++TS TGA   D+L+    R+  + + +F   VQG+     I   
Sbjct: 123 SAHKKPLPRFPKRIALLTSATGAAKEDMLKVAHKRWNLVHITLFNTLVQGEGAKDSIVEN 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + ++     T    D+I+L RGGGS+ED+W FN+E +  AI ++  PIISA+GHE D 
Sbjct: 183 LKRADSFF--GTSESFDVIVLGRGGGSMEDMWAFNEECVADAIYSARTPIISAVGHEVDV 240

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD+RAPTP+ A E+ +P K      L  +       + +    K   L  + + 
Sbjct: 241 FISDFVADVRAPTPSAAMEILLPDKNEYLRVLDEIMNSYFYALKQQFVLKSQALERMREY 300

Query: 314 --LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL--IHNIQKN 369
             L N +Q       +++   + +  ++  ++  K   + HI   + +     +   Q  
Sbjct: 301 FKLYNFEQRYCAKVEQINIFQQMMRDSMNAVLEDKMLKYEHIFLSLNARCEEKLQQCQYE 360

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            + +LE    +         Y  + K+ K   L  +    +  +  +   I  L  R++
Sbjct: 361 YERMLEVFNALNPHSLSTRGYAQISKEGKPCRLSDIDINEEFYLSDMTHSI--LAKRLQ 417


>gi|15644887|ref|NP_207057.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 26695]
 gi|14194710|sp|O25039|EX7L_HELPY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|2313353|gb|AAD07327.1| exonuclease VII, large subunit (xseA) [Helicobacter pylori 26695]
          Length = 420

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 122/419 (29%), Positives = 203/419 (48%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            +++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I+  ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIVYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L+ 
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLVA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +   +   +    + +         +    TR    +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGALVSKNNQAIELEALKRGDKIELSNEKTRASAEI 414


>gi|332298471|ref|YP_004440393.1| Exodeoxyribonuclease 7 large subunit [Treponema brennaborense DSM
           12168]
 gi|332181574|gb|AEE17262.1| Exodeoxyribonuclease 7 large subunit [Treponema brennaborense DSM
           12168]
          Length = 408

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 13/346 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SVSEL+  +K ++E +   V + GEIS  R   S+GH YF+LKD  + I A+++KG + 
Sbjct: 16  FSVSELTGIIKEMLEGSFPFVHIEGEISNCR-PASTGHLYFTLKDAGAAISAVMFKGKMK 74

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F P +G    V G I+ +     YQI++ES+  +G+G +L  LE+RK++L  EGLF 
Sbjct: 75  SLTFAPADGTLVRVKGSISVYALRGNYQIVVESMELAGTGNILQMLEERKRRLAAEGLFD 134

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+PF P+ I V+TSPTGA +RDILQ    R P + V + P  VQG +  + I   
Sbjct: 135 SRRKRPLPFFPQTIGVVTSPTGAALRDILQITRRRNPKVSVTVLPCAVQGSDAAQAIVRM 194

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N           D++I+ RGGGS+EDL  F++E +VRA+A S IPI+SA+GHE DW
Sbjct: 195 IETANA------YRLADVLIVGRGGGSLEDLLPFSEESVVRAVAASEIPIVSAVGHEIDW 248

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D+AAD+RAPTP+ AAE+  P+   L + +  ++  + + +   ++     + S    
Sbjct: 249 ALSDFAADVRAPTPSAAAELVTPLLTDLYAGIDRIKRDVYHTVETRLERMRLLVRSFT-- 306

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
               +      R     L  + +   E ++       + +  RI +
Sbjct: 307 ---PESLELRFRTIEQPLLADFDDAKEALLGNMQCKCDELRRRITA 349



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/163 (9%), Positives = 46/163 (28%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE-KIAIL 402
                  +     +++       +     + +    I++I +     +    +  ++ + 
Sbjct: 244 HEIDWALSDFAADVRAPTPSAAAELVTPLLTDLYAGIDRIKRDVYHTVETRLERMRLLVR 303

Query: 403 HMLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
               E  + R   +              +   +  K       ++   R L+       L
Sbjct: 304 SFTPESLELRFRTIEQPLLADFDDAKEALLGNMQCKCDELRRRITAAVRDLEGANPSAIL 363

Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVIN 500
            RGY+ +++ +    +    + A    + I    G+    V  
Sbjct: 364 ARGYSMVRNPHTGAVVRSPADTAIGQTLEIIPASGRITVSVTG 406


>gi|217031476|ref|ZP_03436981.1| hypothetical protein HPB128_21g34 [Helicobacter pylori B128]
 gi|298736795|ref|YP_003729325.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B8]
 gi|216946676|gb|EEC25272.1| hypothetical protein HPB128_21g34 [Helicobacter pylori B128]
 gi|298355989|emb|CBI66861.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B8]
          Length = 420

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 120/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G ++ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I    L     + +  
Sbjct: 301 SLKRLS--FENKHHLNTLKLEKLKIALENKTLEFLRFKKTLLEKISIQALTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNHQAVELEALKRGDKIELSNEKARASATI 414


>gi|94986849|ref|YP_594782.1| exonuclease VII, large subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731098|emb|CAJ54460.1| Exonuclease VII, large subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 480

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 135/510 (26%), Positives = 220/510 (43%), Gaps = 57/510 (11%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SV EL+Y +K+ VE+ L +V V+GE++ Y    +SGH YFSLKDN S +  + +    
Sbjct: 4   ILSVQELTYKIKYAVETLLPYVWVKGEVTNY-SCPTSGHIYFSLKDNESYLHCVWFNSMQ 62

Query: 74  N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
                                +      G + +  G I  +P    YQ++++     G G
Sbjct: 63  RETETFDPLTGEVFQNGPRLSLAKTITNGQKIICAGTIGVYPPKGGYQLLVDFAQSEGVG 122

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR- 173
              +ALEKRK +L ++G F    K  IP  PK I VITSP GA I+D L+    R   + 
Sbjct: 123 EWYSALEKRKNELQQQGYFDLSRKQIIPHNPKKIVVITSPAGAAIQDFLRIAKERGTEKY 182

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           + I+PV VQG+E   +IA AI   N           ++I+L RGGG+ +DL  FND+ ++
Sbjct: 183 IRIYPVTVQGEESIHQIAQAIHTENNSNWA------EVIVLIRGGGASQDLMVFNDQQLI 236

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
            AI  S IPI++ IGHE+D + A+  ADLRA TP+ AA++    +  L+  + ++E  L 
Sbjct: 237 DAIYTSKIPILAGIGHESDISFAELTADLRAATPSHAAQLLWSERTQLKQQVHDMEIALT 296

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
                 ++      N L   L          R   + L     +     IF       ++
Sbjct: 297 KAAHFQLQKIQYVFNKLNTTLQWLSPLKKLER---NELQLNSIYEKLNAIFNYKLKLKNL 353

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                +    ++I K   +  E+   +++ + +++  I L KK+       L        
Sbjct: 354 DLIQYTQLPSYSIVKKISYYKEQLSFLQRKLYRYIHSILLTKKQNTNNNKQLL------- 406

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---LQSFAYKNTLKRGYTSIQDTNN 470
                            +++  +     +    ++   L+       LKRGY  I   N 
Sbjct: 407 -----------------INNFFQKYQQLLYNYEKLHVTLKMLNPHLLLKRGYALIYLPNG 449

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVIN 500
             +   +    +T + I   DG  +  VI+
Sbjct: 450 QILHSIQEAPEQTILTIKLPDGLLSVKVIS 479


>gi|308184064|ref|YP_003928197.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori SJM180]
 gi|308059984|gb|ADO01880.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori SJM180]
          Length = 420

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 123/390 (31%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPICELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +L     +     +  +L++L   LE+     +  K      I  ++ S       +  R
Sbjct: 301 SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQL-STSPFLQTKTER 359

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
            + LE    +     +  ++  L  K   A
Sbjct: 360 LNRLENALKLAYANLKLPQFGALVSKNDQA 389


>gi|302392486|ref|YP_003828306.1| exodeoxyribonuclease VII, large subunit [Acetohalobium arabaticum
           DSM 5501]
 gi|302204563|gb|ADL13241.1| exodeoxyribonuclease VII, large subunit [Acetohalobium arabaticum
           DSM 5501]
          Length = 406

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 207/358 (57%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +V+EL+ ++K  +E++  L+++ + GEIS +   HSSGH YF+LKD++SR+ +++++   
Sbjct: 2   TVTELTKYIKRRLETDDLLNNLLITGEISNF-HHHSSGHMYFTLKDDNSRLKSVMFRSAN 60

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F PE+G+E +  G ++ +    +YQ+ ++ L P G G L  A E+ K++L ++GLF
Sbjct: 61  QNLKFQPEDGMEVIASGYVSLYESRGQYQLYVQDLQPEGIGALHIAFEQLKEELQKKGLF 120

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
           + +HK  +P  P+ + VITSPTGA IRDIL  I  RF  + V++ P  VQGD+    +  
Sbjct: 121 AVEHKQELPQFPQKVGVITSPTGAAIRDILSVIQRRFRGVSVLVAPATVQGDKAASTLVG 180

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+  LN   +       D+II+ RGGGSIEDLW FN+E + RAI +S  P++SA+GHETD
Sbjct: 181 ALEILNQQSD------VDVIIIGRGGGSIEDLWPFNEEEVARAIFSSQTPVVSAVGHETD 234

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSL 310
           +T++D+ AD+RAPTP+ A E+ V  ++ +   +  L   L   I + +    N       
Sbjct: 235 YTISDFVADVRAPTPSAAGELVVSNQKEVNRYVKGLTDSLVQNIEQKLSDCRNQLVNLME 294

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +      + L   + R+D L   L + +E  +            ++ +   ++ + +
Sbjct: 295 RRVFLQPKRQLKDRKQRIDELEERLINLMERRLNLAQERLQSKAGKLDTLSPLNILSR 352



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 49/127 (38%), Gaps = 2/127 (1%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           + +V+   + +   + + + ++      Q K ++      I +L  R+  ++  ++    
Sbjct: 272 DSLVQNIEQKLSDCRNQLVNLMERRVFLQPKRQLKDRKQRIDELEERLINLMERRLNLAQ 331

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFFDGQANAIV 498
             +      L + +  N L RGY+  +  +    ++    +    ++ I   DG+    V
Sbjct: 332 ERLQSKAGKLDTLSPLNILSRGYSYCRKRDKKESLSSVSEIKPGDKLEIFLSDGKLEIEV 391

Query: 499 INKAPPK 505
           +N    K
Sbjct: 392 MNIKKGK 398


>gi|20807743|ref|NP_622914.1| exonuclease VII large subunit [Thermoanaerobacter tengcongensis
           MB4]
 gi|22095660|sp|Q8RAC9|EX7L_THETN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|20516296|gb|AAM24518.1| Exonuclease VII large subunit [Thermoanaerobacter tengcongensis
           MB4]
          Length = 404

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 130/375 (34%), Positives = 211/375 (56%), Gaps = 13/375 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    +SVSE++ ++K +++++  L +V VRGEIS  +    S   YF+LKD  + +  +
Sbjct: 1   MQLKAFSVSEVTEYIKKVMDNDIILRNVRVRGEISNLKYH--STAVYFTLKDEGAALKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      +EF  ++G+  +  G+IT +     YQ+ ++S+   G G L  A  K K+KL
Sbjct: 59  MFNDYSRSLEFTLQDGMSVIATGRITVYEKGGLYQLYVQSVQMDGIGALYIAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  P+ IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 QKEGLFDLDKKKPIPKHPRKIAVVTSPTGAVIRDIITISRRRNPTVDIMVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI+NA+  LN  K+       D+II+ARGGGS+E++W FN+E + R+I  S IP++SA
Sbjct: 179 ADEISNALRILNKRKD------IDVIIVARGGGSLEEIWPFNEEKVARSIFASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+AD+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ ++ N++   + +    
Sbjct: 233 VGHETDFTIADFVADLRAPTPSAAAELVVPDIKVYQRELFLLKTKIMNLMKAQVLHSKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L N  +     + R+  L + L   +  I  +K      +  ++ S   + 
Sbjct: 293 FEGLKRALYLNNPIKKNEVLKQRVKNLKKSLTKEMLSIFNQKKNELLVLNEKLDSLSPLK 352

Query: 365 NIQKNRQHILEKQQH 379
            + +    +L K+  
Sbjct: 353 VLTRGYTIVLNKEGQ 367



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 2/130 (1%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           ++  +   ++   L  K++   L   +       +   L   +K L   +   +      
Sbjct: 274 LKTKIMNLMKAQVLHSKKEFEGLKRALYLNNPIKKNEVLKQRVKNLKKSLTKEMLSIFNQ 333

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               + +    L S +    L RGYT + +     IT  R + T   + I F DG+A A+
Sbjct: 334 KKNELLVLNEKLDSLSPLKVLTRGYTIVLNKEGQVITSSRKVKTSEEVGILFSDGRATAV 393

Query: 498 VINKAPPKEQ 507
           V       E+
Sbjct: 394 VKEVKEDGER 403


>gi|296120701|ref|YP_003628479.1| exodeoxyribonuclease VII large subunit [Planctomyces limnophilus
           DSM 3776]
 gi|296013041|gb|ADG66280.1| exodeoxyribonuclease VII, large subunit [Planctomyces limnophilus
           DSM 3776]
          Length = 414

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 136/364 (37%), Positives = 197/364 (54%), Gaps = 10/364 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
              D P+ +VS+LS  L+ IVE     V V GEISG     SSGH YF+LKD  S+I A+
Sbjct: 2   PGNDLPKLTVSQLSDCLREIVEMAFPRVIVTGEISGLT-RASSGHVYFTLKDEASQIKAV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +W+ +  K++F   +G+    IG +  +    +YQ+++E L P G G L  A  +   KL
Sbjct: 61  MWRSSAIKLKFDLRDGLAVEAIGGVEVYAPRGQYQLMVERLTPQGIGPLELAFRQLHAKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             EGLF    K P+P  PK IAVITSP GA + DILQ +  R+  + V++ PV VQG E 
Sbjct: 121 AAEGLFDVARKRPLPRFPKRIAVITSPAGAAVHDILQILLRRWPGVNVVVVPVPVQGPEA 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +IA A+  ++ L      P  D++I  RGGGS+EDLW FN+E++ RAIA   IP+ISA
Sbjct: 181 APKIAAALGMVHRL------PDVDVVICGRGGGSLEDLWAFNEELVARAIAQCRIPVISA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD T+AD  AD RA TP+ AAE  +PVK      L  L  RL + ++ L   +   
Sbjct: 235 VGHETDVTIADLVADQRALTPSEAAERVIPVKAEWVQHLDQLRDRLCSSLVALTNSRRKE 294

Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L      +AL    + +      LD L   L+ + +  +             +++   + 
Sbjct: 295 LEQLKKRRALAKPLEQIHRFSRELDDLETRLKQSWKRKLASLNAELESAGRALQALSPLA 354

Query: 365 NIQK 368
            +++
Sbjct: 355 VLER 358



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 6/161 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++   ++       ++      E  QH++Q+  +    +      +   L 
Sbjct: 237 HETDVTIADLVADQRALTPSEAAERVIPVKAEWVQHLDQLRDRLCSSLVALTNSRRKELE 296

Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L+++        +I      +  L TR++     K+ S +  +    R LQ+ +    L
Sbjct: 297 QLKKRRALAKPLEQIHRFSRELDDLETRLKQSWKRKLASLNAELESAGRALQALSPLAVL 356

Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIV 498
           +RG++  +     + I   + +    R+     DGQ  + V
Sbjct: 357 ERGFSISKRVPGGDLIQSVKQVQVGDRLATLVADGQILSQV 397


>gi|120611236|ref|YP_970914.1| exodeoxyribonuclease VII large subunit [Acidovorax citrulli
           AAC00-1]
 gi|120589700|gb|ABM33140.1| Exodeoxyribonuclease VII large subunit [Acidovorax citrulli
           AAC00-1]
          Length = 436

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              +     + V  L   +   +E+  + V VRGEI+G+    SSGH YFS+KD   +I 
Sbjct: 5   PDPATAPRIWDVGALCRAVADALEARFNPVAVRGEITGF-SRASSGHCYFSIKDGQGQIR 63

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++     +   P +G    + G++  +      Q+I+ESL  +G G L     + K 
Sbjct: 64  CAMFRRAAMLLNGTPRDGEMVELRGRLAVYEARGDLQLIVESLQRAGQGALFEQFLRLKA 123

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF    K  +P +P+ I ++TSP  A + D++  +  R P L V++ P  VQG 
Sbjct: 124 RLESEGLFDSARKRGLPVMPRSIGLVTSPGAAALHDVVTALRRRVPHLPVVLAPALVQGA 183

Query: 185 ECPKEIANAILQLNTLKE---GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
             P  I  A+  L  + E   G   P  ++I+L RGGGSIEDLW FNDE + R +  S +
Sbjct: 184 AAPASICTALRALYRMAEPGGGAGHPPVEVILLVRGGGSIEDLWAFNDEQVARTLVQSPV 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +    + +  L  RL++ + R + 
Sbjct: 244 PVVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPQATWLAGMDALAGRLSDSLQRQLD 303

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   L+   + L      ++    RL RL ++L H       R  +  + + +R+    
Sbjct: 304 GRHQRLDMAAQRLGRPSGLVTRQELRLARLAQQLRHGAAWTTQRYAQRQDALADRL-PRA 362

Query: 362 LIHNIQKNRQHILEKQQHIEQI 383
           +   + +  Q +      +E +
Sbjct: 363 VAQGVARQAQRLDHAALRLELL 384



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 4/145 (2%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           SD L   +    Q +    Q + +      R      +    +   LR            
Sbjct: 295 SDSLQRQLDGRHQRLDMAAQRLGRPSGLVTRQELRLAR----LAQQLRHGAAWTTQRYAQ 350

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
               L  R+   ++  +      +      L+    +  L+RGY  + D+    +T+   
Sbjct: 351 RQDALADRLPRAVAQGVARQAQRLDHAALRLELLDPRLVLQRGYALLTDSGGLPVTRTAQ 410

Query: 479 LATKTRILINFFDGQANAIVINKAP 503
           + T   +     DG+ +  V    P
Sbjct: 411 VRTGDAVRAAVSDGEIDLTVSAPRP 435


>gi|302337858|ref|YP_003803064.1| exodeoxyribonuclease VII large subunit [Spirochaeta smaragdinae DSM
           11293]
 gi|301635043|gb|ADK80470.1| exodeoxyribonuclease VII, large subunit [Spirochaeta smaragdinae
           DSM 11293]
          Length = 407

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 135/357 (37%), Positives = 201/357 (56%), Gaps = 10/357 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           Y+VS L+  +K  +ES  S V V GEIS +R   + GH YFSLKD  + I A++++G   
Sbjct: 11  YTVSGLTALIKERLESGFSSVAVEGEISNFRPSAA-GHWYFSLKDQDAVISAVMFRGKSA 69

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +++F PE+GI   + G ++ +     YQII ++++ SG G +L  LE+RK++L  EGLF 
Sbjct: 70  RVDFYPEDGITVKISGNLSVYEKRGNYQIICDTMVRSGEGAILAMLEERKRRLAAEGLFD 129

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANA 193
            + K PIP  P  +AVITSPTGA +RDILQ +  R   + + I P  VQGD   ++IA  
Sbjct: 130 LEKKKPIPPFPARVAVITSPTGAALRDILQVLGRRGAGVDITILPTLVQGDGAAEQIAAQ 189

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I + N    G      ++II+ RGGGS+EDL  F++E + RA+A S+IPIISA+GHETD 
Sbjct: 190 IRRANRYNMG------EVIIIGRGGGSLEDLLPFSEEAVARAVAESTIPIISAVGHETDT 243

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLL 311
            L+D AADLRAPTP+ AAE+    +E L   +  +   + + ++R  +         S  
Sbjct: 244 ALSDLAADLRAPTPSAAAELVCEEREALLLRVGAIAGEMRDNLLRGAEKARILLQRFSGE 303

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +      + L   R  LD    E    +   I  +      II  +++   +  +QK
Sbjct: 304 EMKERMQRLLQPRRLELDDQREEAVRAIGEKITAERHRLALIIKELETSNPLAILQK 360



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 6/168 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ---KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
                  + +   +++       +   + R+ +L +   I   ++ +L     + +  + 
Sbjct: 239 HETDTALSDLAADLRAPTPSAAAELVCEEREALLLRVGAIAGEMRDNLLRGAEKARILLQ 298

Query: 401 IL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                 ++E+ +  +      +          +  KI +    +++  + L++      L
Sbjct: 299 RFSGEEMKERMQRLLQPRRLELDDQREEAVRAIGEKITAERHRLALIIKELETSNPLAIL 358

Query: 459 KRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           ++GY  +    +N  +T          + I    G  +A +      K
Sbjct: 359 QKGYAVVSRKRDNGLVTDAAEERLGEALCIRLAKGSVDATIEEIHSEK 406


>gi|189347516|ref|YP_001944045.1| exodeoxyribonuclease VII large subunit [Chlorobium limicola DSM
           245]
 gi|189341663|gb|ACD91066.1| exodeoxyribonuclease VII, large subunit [Chlorobium limicola DSM
           245]
          Length = 465

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 134/346 (38%), Positives = 203/346 (58%), Gaps = 6/346 (1%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL++ +K  +ES    V V+GEIS  +  HSSGH Y +LKD+ ++I A+IWK T  
Sbjct: 69  LSVSELTFRIKSELESIFPVVRVKGEISNCK-RHSSGHTYLTLKDDQAQIPAVIWKNTGT 127

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +I F   +G+E +  G++  +P S +YQ+I  S+  +G G L  A     +KL + G F+
Sbjct: 128 RISFDLRDGMEVIAEGRLEVYPPSGRYQLICSSVTEAGQGQLQQAFAMLLQKLAKAGYFN 187

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K  IP IP+ I +ITSPTGAVI D+ + I  RFP +R+++FPV+VQGD+  +E+   
Sbjct: 188 AERKKKIPAIPETIGIITSPTGAVIEDMGRVIERRFPAVRILLFPVRVQGDDAAREVKRG 247

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N         R D++I+ARGGGS+EDL  FN+EM+  AI  SS+P+ISA+GHETD 
Sbjct: 248 IDYFN--NPADPRHRADVLIVARGGGSMEDLQAFNEEMVAEAIYRSSVPVISAVGHETDI 305

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+AD  ADLRA TP+ AAE+AVP +  L  ++ N + R + ++   +      ++SL ++
Sbjct: 306 TIADMVADLRAGTPSIAAELAVPDRGDLLKTIENQQMRQSALMQAKLDGAKMEIDSLRQS 365

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
                    L     + +  P  L+  +     +K   F     ++
Sbjct: 366 YAFNRPLMQLQQLSEKAESFPELLDLAVRRKWLQKATEFAAANQQL 411



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 1/123 (0%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           Q + Q      +    + +           +   ++  L    +     ++  +  K   
Sbjct: 340 QQMRQSALMQAKLDGAKMEIDSLRQSYAFNRPLMQLQQLSEKAESFPELLDLAVRRKWLQ 399

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
             T  +   + L    Y+  L+RGY  ++     FIT    L    R  I F DG     
Sbjct: 400 KATEFAAANQQLALLDYRKILQRGYALVKKET-RFITGSCELGLSDRADILFHDGSVAVT 458

Query: 498 VIN 500
           V  
Sbjct: 459 VTG 461


>gi|295108282|emb|CBL22235.1| exodeoxyribonuclease VII, large subunit [Ruminococcus obeum A2-162]
          Length = 409

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/403 (27%), Positives = 195/403 (48%), Gaps = 13/403 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            +SV +++ ++K++   +     + V+GE+S  +  H+SGH YFSLKD    +  +++ G
Sbjct: 4   IFSVGQINRYVKNMFTQDFILQKIYVKGEVSNCK-YHTSGHIYFSLKDETGVLSCVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  ++G   +V G +  +    +YQ+  + +   G+G L       K +L E G
Sbjct: 63  HRRGLAFRMKDGDRVVVGGAVDVYERDGRYQLYAKEITLEGAGALYERFLALKAELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F++++K PIP     + V+T+PTGA ++DI      R P L++I++P  VQG+     I
Sbjct: 123 MFAEEYKQPIPHYIHRLGVVTAPTGAAVQDIRNISLRRNPYLQIILYPALVQGEGAADSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            + I  L+           D II+ RGGGSIEDLW FN+E + RAI     PIISA+GHE
Sbjct: 183 VHGIHMLDQA-------GVDTIIVGRGGGSIEDLWAFNEEKVARAIFECRTPIISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ +DLRAPTP+ AAE+AV     +   +     RL   +   ++     L   
Sbjct: 236 TDFTIADFVSDLRAPTPSAAAELAVDDFRQIMQEIRIGRERLERGMNGKLELYRMKLAKY 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              +   + +  L  SR RL      +   ++  +          + R +    +  + +
Sbjct: 296 QMRMQYLSPEGKLRDSRQRLIDNENRIRKAMQDKVLGYRHQLGICLERYRGLSPLEKLNQ 355

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
               + ++Q    + V+Q      ++      +L       + 
Sbjct: 356 GYAFVADEQGRGIRSVEQVQPGDTVKVNVTDGVLEAEIRHIRR 398



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 43/151 (28%), Gaps = 5/151 (3%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +  +   E+ +       +  R    + + ++  L       + ++      +   
Sbjct: 264 RQIMQEIRIGRERLERGMNGKLELYRMKLAKYQMRMQYL-----SPEGKLRDSRQRLIDN 318

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             RI   +  K+      + I     +  +    L +GY  + D     I     +    
Sbjct: 319 ENRIRKAMQDKVLGYRHQLGICLERYRGLSPLEKLNQGYAFVADEQGRGIRSVEQVQPGD 378

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514
            + +N  DG   A + +      +       
Sbjct: 379 TVKVNVTDGVLEAEIRHIRREDWENGTADNR 409


>gi|121534500|ref|ZP_01666323.1| exodeoxyribonuclease VII, large subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121306993|gb|EAX47912.1| exodeoxyribonuclease VII, large subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 407

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 217/386 (56%), Gaps = 13/386 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            +SVSE++ ++K +++ +  L+ V VRGEIS ++  H SGH YF+LKD  + +  ++++ 
Sbjct: 3   IFSVSEITCYIKGLLDGDDTLADVFVRGEISNFK-RHYSGHCYFTLKDAGATLRCVMFRS 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            +  ++F P +G++ +  G I+ F    +YQ+ ++ L+P+G G L  ALE+ K+KL  EG
Sbjct: 62  RVQFLKFEPRDGLKVIAGGHISVFERDGQYQLYVDQLVPAGLGELSLALEQLKEKLAAEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF+++ K P+P +PK + VITSP GA +RDI+     R P + ++++PV+VQG E   +I
Sbjct: 122 LFAEERKKPLPLLPKAVGVITSPVGAALRDIITVARRRHPGIPIVLYPVQVQGPEAAPQI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+AI   N L         D++I+ RGGGS+E+LW FN+E  VRAIA SSIP++SA+GHE
Sbjct: 182 AHAIRVFNRLA------NVDVLIVGRGGGSLEELWAFNEEEAVRAIAASSIPVVSAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI---NTL 307
           TD+TLAD+AAD RA TP+ AAE+  P  + L   +  L   + + +   IK         
Sbjct: 236 TDYTLADFAADRRAATPSQAAEIVFPDVQELGRYIRMLRQAMESHVQSYIKRYRLLVEQY 295

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                      + ++  +  LD   + L H ++     K   F  I  ++     +  + 
Sbjct: 296 RDSRALRRRPVEIVAAKQQLLDISLQRLHHIVKEQFTTKQHRFKVIAEKLAVLNPLMVLA 355

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFL 393
           +    +      I + V Q  +   L
Sbjct: 356 RGYSIVRTPDGRIIRAVDQVGKDQLL 381



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 3/135 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAI---LHMLREQTKNRIFYLHTHIKKLITRI 427
           Q +    + + Q ++ H++      +  +        LR +    +      +   + R+
Sbjct: 264 QELGRYIRMLRQAMESHVQSYIKRYRLLVEQYRDSRALRRRPVEIVAAKQQLLDISLQRL 323

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
             I+  +  +      +    L        L RGY+ ++  +   I     +     + I
Sbjct: 324 HHIVKEQFTTKQHRFKVIAEKLAVLNPLMVLARGYSIVRTPDGRIIRAVDQVGKDQLLEI 383

Query: 488 NFFDGQANAIVINKA 502
               G+  A V    
Sbjct: 384 VLHRGRIEARVEKIG 398


>gi|307636951|gb|ADN79401.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 908]
 gi|325995542|gb|ADZ50947.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 2018]
 gi|325997138|gb|ADZ49346.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 2017]
          Length = 420

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPNFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L +    L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRHSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L   LE       R    ++ +I    L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLTIALENKTLEFLRFKKMLLEKISIQVLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E    +E  +K     + L +
Sbjct: 357 -TEHLNRLENALKLAYANLKLPQ 378


>gi|156742851|ref|YP_001432980.1| exodeoxyribonuclease VII large subunit [Roseiflexus castenholzii
           DSM 13941]
 gi|156234179|gb|ABU58962.1| exodeoxyribonuclease VII, large subunit [Roseiflexus castenholzii
           DSM 13941]
          Length = 393

 Score =  280 bits (715), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 117/359 (32%), Positives = 194/359 (54%), Gaps = 13/359 (3%)

Query: 15  YSVSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS+L+ +L+ +++++     V V GEIS +   H SGH YF+LK+  ++I A++WK  
Sbjct: 4   LTVSQLNMYLRDLLDADDLLRDVWVEGEISSF-SRHFSGHCYFTLKEGEAQIGAVMWKSV 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++  LP  G   L  G++  +    + Q+ +++L P+G G L    E+ K++L  EGL
Sbjct: 63  AARLAALPANGEAVLAHGRVAFYEVRGQVQLYVDTLRPAGIGLLQAQFERLKERLAAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F    K P+P +P  I ++TSPTGA ++D+L  +  R+PL  ++  P +VQG    + I 
Sbjct: 123 FDPSRKRPLPLLPHRIGIVTSPTGAALQDVLNILRRRYPLAEIVFAPCRVQGAGAAETII 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           NA+  L            D+II+ARGGG  EDLW FNDE + RA+  S +P++S +GHET
Sbjct: 183 NALYALYE-------TNVDVIIVARGGGGAEDLWTFNDEQVARAVFASPVPVVSGVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TL D+ AD+RAPTP+ AAE+  P    L   + ++  RL   + + +     T++ L 
Sbjct: 236 DTTLIDFVADVRAPTPSAAAELVSPDIVALTDDIAHMRNRLEAAMTQRLANARETIDRLK 295

Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               L + +  +   R  +D L R     LE  +       +    R+++   +  + +
Sbjct: 296 LRLSLRSPESRIRRDRQHIDELLRRATSTLERRLILARTRLDGARGRLEALSPLATLAR 354



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 2/127 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I   +  +E  + Q  R     +      L +     ++RI     HI +L+ R    L
Sbjct: 268 DIAHMRNRLEAAMTQ--RLANARETIDRLKLRLSLRSPESRIRRDRQHIDELLRRATSTL 325

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             ++    T +      L++ +   TL RGY  +Q      IT+   +A   RI I    
Sbjct: 326 ERRLILARTRLDGARGRLEALSPLATLARGYAIVQSPTGTLITEAAQVAPDDRIEIIVRR 385

Query: 492 GQANAIV 498
           G+ +A V
Sbjct: 386 GRFHAHV 392


>gi|325473468|gb|EGC76663.1| exodeoxyribonuclease 7 large subunit [Treponema denticola F0402]
          Length = 398

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 127/366 (34%), Positives = 194/366 (53%), Gaps = 10/366 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           YSV E++  +K ++ES   +V + GEIS +R   + GH YF+LKD  + I A+++KG   
Sbjct: 5   YSVYEITLQIKELLESGFGYVSIEGEISNFRPSAA-GHLYFTLKDEKASIQAVMFKGKTR 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F+P++G+     G I+ +     YQIIIE +  +G G +L  LE+RKKKL  EG+F 
Sbjct: 64  SLSFVPKDGMTVKAEGAISVYEQRGSYQIIIEEMSLAGEGNILKMLEERKKKLAAEGIFD 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
            + K P+P+ PK IAVITSPTGA +RDI+  +  R   + +++ P  VQG+E    +   
Sbjct: 124 SERKKPLPYFPKRIAVITSPTGAAVRDIINVVKRRNEKIGIVVLPAIVQGEEAAPVLIR- 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
                 LK        D+II+ RGGGS+EDL  F+DE +VRAIA    P+ISA+GHE DW
Sbjct: 183 -----QLKIADEKNLGDLIIIGRGGGSLEDLLPFSDEELVRAIAACKTPVISAVGHEIDW 237

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLK 312
            L+D+AAD+RAPTP+ AAE+A P+   +  S+      L   I   I+       N    
Sbjct: 238 ALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIERIRLMLNNFKPD 297

Query: 313 ALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +L    + +      R D    E+   ++       +    +   ++       + +   
Sbjct: 298 SLELRFRNIQQPLLARFDNAKEEILSGMQERCKDLRQRLLVLNKILEGANPQGILDRGYS 357

Query: 372 HILEKQ 377
            +   Q
Sbjct: 358 IVRNAQ 363



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 7/172 (4%)

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
            E++  L                 + +  L   +     +  +  Q+IE  ++   R   
Sbjct: 233 HEIDWALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIE---RIRL 289

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +    K   L +     +  +             I   +  + K     + +  +IL+  
Sbjct: 290 MLNNFKPDSLELRFRNIQQPLLA---RFDNAKEEILSGMQERCKDLRQRLLVLNKILEGA 346

Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
             +  L RGY+ +++      I     +     +LI    G   A V   + 
Sbjct: 347 NPQGILDRGYSIVRNAQTGKTIRSFSQVKEGEALLIQPSKGTIEAEVKRVSS 398


>gi|119357870|ref|YP_912514.1| exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides
           DSM 266]
 gi|119355219|gb|ABL66090.1| Exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides
           DSM 266]
          Length = 402

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 142/372 (38%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SVSEL+ H+K+ +ES    V VRGEIS  +  H+SGH Y +LKD  ++I A+IW
Sbjct: 1   MSTAILSVSELTRHIKNELESLFPRVSVRGEISNCK-RHNSGHIYLTLKDEGAQIPAVIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K    ++     +G   +  G++  +P S +YQ+I  S+  +G G L  A     +KL +
Sbjct: 60  KHLAGRLAADLRDGQTVVAEGRLEVYPPSGRYQLICTSVTDAGEGALQQAFALLLQKLSK 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G FS + K  +P IPK I +ITSPTGAVI D+      RFP + + +FPV+VQG E  +
Sbjct: 120 AGYFSAERKRAMPKIPKTIGIITSPTGAVIEDMGNTFHRRFPAVSLRLFPVRVQGTEAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EI +AI   N ++E     RPD++I+ARGGGS+EDL  FN+E++  AI NS IP+ISA+G
Sbjct: 180 EICSAIRYFNNIRE--PDLRPDLLIVARGGGSMEDLQPFNEEIVADAIYNSHIPVISAVG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD  ADLRA TP+ AAE+AVP +  L   + NL+ R   ++   +      ++
Sbjct: 238 HETDITIADMVADLRAGTPSIAAELAVPDRSELLRMIENLQNRQGTLLQAKLAGAELEID 297

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNI 366
           SL  +   +   L     + D L   LE  +E  +   Y       +  R     L +  
Sbjct: 298 SLRNSYAFNRPLL--HMKQCDDLLANLERQMEQSVRTGYLQTAQRYLSARQHLSLLDYRK 355

Query: 367 QKNRQHILEKQQ 378
              R + L K++
Sbjct: 356 TLARGYALVKKE 367



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 3/133 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427
           R  +L   ++++      L+      + +I  L       +    +      +  L  ++
Sbjct: 267 RSELLRMIENLQNRQGTLLQAKLAGAELEIDSLRNSYAFNRPLLHMKQCDDLLANLERQM 326

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
           E  +               + L    Y+ TL RGY  ++      +T  + L  + R  +
Sbjct: 327 EQSVRTGYLQTAQRYLSARQHLSLLDYRKTLARGYALVK-KEGAVVTSAQCLHLQDRTEL 385

Query: 488 NFFDGQANAIVIN 500
            F DG   A+V  
Sbjct: 386 LFHDGSVTAVVTE 398


>gi|254778963|ref|YP_003057068.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B38]
 gi|254000874|emb|CAX28808.1| Exodeoxyribonuclease VII large subunit (Exonuclease VII large
           subunit) [Helicobacter pylori B38]
          Length = 420

 Score =  279 bits (714), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 120/419 (28%), Positives = 198/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G ++ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFKIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCLNALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHFAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I    L +   + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRLKKTLLEKISIQTLTNPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNRLENALKLAYANLKLPQFGAFVSKNHQAIELEALKAGDKIELNNEKARASAEI 414


>gi|28211244|ref|NP_782188.1| exodeoxyribonuclease VII large subunit [Clostridium tetani E88]
 gi|31563102|sp|Q894G7|EX7L_CLOTE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|28203684|gb|AAO36125.1| exodeoxyribonuclease VII large subunit [Clostridium tetani E88]
          Length = 396

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 127/362 (35%), Positives = 213/362 (58%), Gaps = 12/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV++++ ++K+ ++++   ++  +RGEIS ++ IHSSGH YFS+KD  S+I+ +++
Sbjct: 3   IKVLSVTDINNYIKNTMDNDFILNNASIRGEISNFK-IHSSGHVYFSMKDQWSKINCVMF 61

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +     ++FLPE+G++ +  G+I+ +     YQ+  + L   G G L  A EK K KL +
Sbjct: 62  RSAAKGLKFLPEDGMKIIANGRISAYVKDGSYQLYCDKLELEGLGELYIAFEKLKNKLEK 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I VITS TGA IRDI+   + R     ++I+P  VQG     
Sbjct: 122 EGLFKEECKKSLPQYAKKIGVITSETGAAIRDIINVATRRNKNCEILIYPSLVQGTNASS 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I   I +LN           D+IILARGGGSIE+LW FNDE + R I  S +PII+ +G
Sbjct: 182 DIIKGIKELNK------VKDLDVIILARGGGSIEELWVFNDEELAREIFKSKVPIITGVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+AD+ +D RAPTP+ AAE+A+   + L S L N +  LN  ++  +K K N L+
Sbjct: 236 HETDFTIADFVSDKRAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLD 295

Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L  ++   + ++ +     ++D +  +L   ++I + ++    + +   + S+  ++ +
Sbjct: 296 RLKLSMEGNSPERIIINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNIL 355

Query: 367 QK 368
            K
Sbjct: 356 NK 357



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%)

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQTKNR 412
           ++       +   + + E    +E        Y+    KEK   L  L+        +  
Sbjct: 250 RAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLDRLKLSMEGNSPERI 309

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           I   +  I  +I ++   +  ++      +S  + +L S    N L +GY+ IQD     
Sbjct: 310 IINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNILNKGYSVIQDGTGKV 369

Query: 473 ITQKRNLATKTRILINFFDGQ 493
           I   + L  + ++ IN  DG+
Sbjct: 370 INTIKELDKEKKVTINLKDGK 390


>gi|126179922|ref|YP_001047887.1| exodeoxyribonuclease VII, large subunit [Methanoculleus marisnigri
           JR1]
 gi|125862716|gb|ABN57905.1| Exodeoxyribonuclease VII large subunit [Methanoculleus marisnigri
           JR1]
          Length = 414

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 200/364 (54%), Gaps = 16/364 (4%)

Query: 12  HPEYSVSELSYHLKHIVESN-LSHVCVRGEISGYRGIHSSGHAYFSLKD----NHSRIDA 66
            P + VSE+S  +  +++   L  + VRGE++ Y+  H+SGH YFSL +    + + I+ 
Sbjct: 14  TPIFGVSEVSGLICDLLDDARLRRIWVRGEVTNYKN-HASGHRYFSLSERNGRSSAVINC 72

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++W+ + + + F P++G++ L  G +  +    +YQ+I+  ++P+G G     +E+ K++
Sbjct: 73  VMWRTSASTLAFAPKDGMDVLAWGSVEVYEPHGRYQLIVREMLPAGLGERHLMVERWKQE 132

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186
           L  EGLF    K P+P  P+ I V+TSPTGA ++DIL  IS R+P  VI+ P  VQG+  
Sbjct: 133 LDAEGLFDPGRKRPLPLFPQRIGVVTSPTGAAVKDILSVISRRYPADVILSPTAVQGEGA 192

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA AI +++ L         D+II+ RGGGS EDL+ FN   +VRA+A    P+ISA
Sbjct: 193 HVEIAEAIRRIDGL--------ADVIIVGRGGGSFEDLFAFNHPDVVRAVAACRTPVISA 244

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D  L D+AADLRAPTP+ AAE AVP +  +   L   E R++ ++   +    + 
Sbjct: 245 VGHEVDTALCDFAADLRAPTPSAAAERAVPERREVLRELAGCEERMHLLVHSRLAASQSE 304

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +  L + +      + ++    RL      L       + R+      +   ++    + 
Sbjct: 305 VEELRERMRPGRLARRINERMQRLAEHDDLLRRAAVARVQRERSALAELRANLEGKNPLA 364

Query: 365 NIQK 368
            +++
Sbjct: 365 ILER 368



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 2/157 (1%)

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                 +     S      + + R+ + E     E++       +   + E   +   +R
Sbjct: 254 CDFAADLRAPTPSAAAERAVPERREVLRELAGCEERMHLLVHSRLAASQSEVEELRERMR 313

Query: 407 E-QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
             +   RI      + +    +      +++   ++++     L+       L+RGY  +
Sbjct: 314 PGRLARRINERMQRLAEHDDLLRRAAVARVQRERSALAELRANLEGKNPLAILERGYCIV 373

Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +      +    +LA   R+ I   DG+A A+V    
Sbjct: 374 E-AGGRVVRSAASLAPGERVTIRMMDGRAVAVVEETT 409


>gi|160899010|ref|YP_001564592.1| exodeoxyribonuclease VII large subunit [Delftia acidovorans SPH-1]
 gi|259646287|sp|A9BWI7|EX7L_DELAS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|160364594|gb|ABX36207.1| exodeoxyribonuclease VII, large subunit [Delftia acidovorans SPH-1]
          Length = 445

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 120/393 (30%), Positives = 203/393 (51%), Gaps = 17/393 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MNP +         + V  L   +   +++  + V VRGEISG+    +SGH YFS+KD 
Sbjct: 8   MNPAAAPL-----VWEVGALCRAVSDALQARFNPVAVRGEISGF-SRAASGHCYFSIKDA 61

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             +I   +++     ++F P +G    + G++  +      Q+++ES+  +G G L    
Sbjct: 62  GGQIRCAMFRRAAQLMDFSPRDGELVELRGRLGVYEQRGDLQLVVESMQRAGQGALFEQF 121

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
            + K +L  EGLF    K  +P +P+ I V+TSP  A + D++  +  R P + V++ P 
Sbjct: 122 LRLKARLEAEGLFDAARKRSLPPLPRGIGVVTSPGAAALHDVITALRRRVPHIPVVLVPA 181

Query: 180 KVQGDECPKEIANAILQLNTLKEGRT---------CPRPDIIILARGGGSIEDLWHFNDE 230
            VQG + P  + +A+ +L  L               P  D I+L RGGGSIEDLW FNDE
Sbjct: 182 LVQGVQAPASLIDALQRLYGLAREGAGSVDGSVAGAPPIDTILLVRGGGSIEDLWAFNDE 241

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            + R I  S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+    +E    +L  ++ 
Sbjct: 242 RLARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVSQPREVWMGALQLMQG 301

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
           RL + + RL+  +   L+   + L    + L+ SR +L R  + L H +++ + R     
Sbjct: 302 RLEDGVQRLLDRQQQRLDLAAQRLGRPSEQLARSRLQLSRQAQRLRHAMQLRLQRMDHAG 361

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             +  ++ +  +   + +   H+   +  ++ +
Sbjct: 362 QGLQAQLPAG-MRRGLDRRADHLARMELRLQLL 393


>gi|326790846|ref|YP_004308667.1| exodeoxyribonuclease VII large subunit [Clostridium lentocellum DSM
           5427]
 gi|326541610|gb|ADZ83469.1| exodeoxyribonuclease VII, large subunit [Clostridium lentocellum
           DSM 5427]
          Length = 409

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV E++ ++  ++E +  L+ + ++GEIS  +  H SGH YF++KD  + I+A+
Sbjct: 1   MKRKIVSVWEVNQYVSRLIEEDYMLNDIWIQGEISNCK-YHQSGHVYFTIKDPKASINAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++  + ++ F  EEG++     +IT +  +  YQ  ++ +   G G L    E+ K +L
Sbjct: 60  MFERDVRRLTFRLEEGMKIYARVRITIYEKTGAYQAYVQDVEKQGKGLLYERFERLKAQL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
           ++EGLF D +K  IP  PK + VITS TGA ++DI+Q    R P + + I+P  VQG+  
Sbjct: 120 MQEGLFDDTYKKSIPTFPKHVGVITSLTGAAVKDIMQVAKRRNPSIPLTIYPTHVQGELA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI  AI   N         R D+IIL RGGGSIEDLW FN+E + RAI  S IPI+SA
Sbjct: 180 VPEIVAAIRLAN------EEKRVDVIILGRGGGSIEDLWAFNEEAVARAIFESKIPIVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T++D+ +D RA TP+ AAEM VP K  L   L + E  L   +    K   N 
Sbjct: 234 VGHEIDFTISDFVSDKRAATPSAAAEMVVPSKSELLELLGSYERSLKKRMEERTKAARNQ 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L  LL        D         ++    +L    +  + +  R +   I+++     ++
Sbjct: 294 LTYLLSRPVYAKKDTFYKVRMQEVEDYCNQLRGAYKDHLTKSERRYELAIHKLDQLSPLN 353

Query: 365 NIQK 368
            +++
Sbjct: 354 TLKR 357



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 3/146 (2%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY--LHTHIKKLITR 426
           ++  +LE     E+ +K+ +       + ++  L       K   FY      ++    +
Sbjct: 264 SKSELLELLGSYERSLKKRMEERTKAARNQLTYLLSRPVYAKKDTFYKVRMQEVEDYCNQ 323

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       +        +    L   +  NTLKRGY+     +N  +    +++    + 
Sbjct: 324 LRGAYKDHLTKSERRYELAIHKLDQLSPLNTLKRGYSLAM-KDNQLVKSVADISEGDELS 382

Query: 487 INFFDGQANAIVINKAPPKEQPTKKC 512
           I   DG   A V  K     + ++K 
Sbjct: 383 ITVTDGTFMAKVCEKENSNGKKSRKK 408


>gi|315586255|gb|ADU40636.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 35A]
          Length = 420

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/383 (31%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTTHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+T+     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISTYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--NTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|238917017|ref|YP_002930534.1| exodeoxyribonuclease VII [Eubacterium eligens ATCC 27750]
 gi|238872377|gb|ACR72087.1| exodeoxyribonuclease VII [Eubacterium eligens ATCC 27750]
          Length = 403

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/359 (30%), Positives = 196/359 (54%), Gaps = 13/359 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K++ + +   + V V+GEIS  +  H+SGH YF+LKD  + +  I++  
Sbjct: 4   VYTVKQVNSYIKNMFKQDFLLNSVSVKGEISNCK-YHTSGHIYFTLKDADAALSVIMFAS 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++ F  ++G+  +V G++  F  + KYQ+   ++   G G L    E+ K+   + G
Sbjct: 63  QAARLSFKLKDGMSVVVSGRVDVFDAAGKYQLYANTVQQEGIGELYQKYEQLKQYYEDMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F+ ++K P+P   + + V+TS TGA ++DI+     R P ++++++P  VQG+   + I
Sbjct: 123 YFAKEYKRPLPAFTRKLGVVTSKTGAAVQDIMNISKRRNPYIQIVLYPAYVQGEHAKQSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            + I +L+ +         D II+ RGGGSIEDLW FN+  +V A+ N+S P+ISA+GHE
Sbjct: 183 VSGITRLDKM-------GLDCIIVGRGGGSIEDLWAFNEPEVVEAVFNASTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+TL D+ AD+RAPTP+ AAE+AV     +++ +   E RL   ++  +  K + L  L
Sbjct: 236 TDFTLTDFVADMRAPTPSAAAELAVTEVAAVENRIYEYERRLKQQMMYSLSAKRDYLERL 295

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
              +   N    +   R RL  +  +L   ++              ++++    +  + 
Sbjct: 296 KLQMEYLNPVNQIYDKRQRLMNIEDKLNMLIKRCAAENRNRLRLYASKLEGLSPLKKLD 354



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 2/131 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I E ++ ++Q +   L       +     +  L     N+I+     +  +  ++  ++
Sbjct: 269 RIYEYERRLKQQMMYSLSAKRDYLERLKLQMEYL--NPVNQIYDKRQRLMNIEDKLNMLI 326

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
                     + +    L+  +    L  GY  I+++  N I     +++   I +   D
Sbjct: 327 KRCAAENRNRLRLYASKLEGLSPLKKLDMGYGYIENSEGNRIVSAGQVSSDDEITVYLKD 386

Query: 492 GQANAIVINKA 502
           G   + VI   
Sbjct: 387 GSIRSKVIEVG 397


>gi|167893142|ref|ZP_02480544.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           7894]
          Length = 335

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/262 (38%), Positives = 157/262 (59%), Gaps = 8/262 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVP 276
           +AD+AAD+RAPTPTGAAE+  P
Sbjct: 254 IADFAADVRAPTPTGAAELVSP 275


>gi|317013705|gb|ADU81141.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           Gambia94/24]
          Length = 420

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 190/384 (49%), Gaps = 10/384 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            +++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEENKLPKPNFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHFARTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L      L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRRSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR-IKSDFLIHNIQKNRQ 371
           +L         S      L       L+I +  K   F  +    ++      +     Q
Sbjct: 301 SLKR------LSFENKHHLNTLKLEKLKIALDNKTLEFLRLKKTLLEKISTQLSTSPFLQ 354

Query: 372 HILEKQQHIEQIVKQHLRYIFLEK 395
              E+   +E  +K     + L +
Sbjct: 355 TKTERLNRLENALKLAYANLKLPQ 378


>gi|149194320|ref|ZP_01871417.1| exodeoxyribonuclease VII large subunit [Caminibacter mediatlanticus
           TB-2]
 gi|149135495|gb|EDM23974.1| exodeoxyribonuclease VII large subunit [Caminibacter mediatlanticus
           TB-2]
          Length = 448

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 129/419 (30%), Positives = 213/419 (50%), Gaps = 11/419 (2%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
              +VS L+  +K I+ES+   V V GE+S     HSSGH YF++KD  S I+  +WK  
Sbjct: 2   KPITVSGLNTQIKSILESHFEIVYVEGEVSKVT-YHSSGHMYFTIKDEKSAINCAMWKSN 60

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           L+K++F  + G + LV G I  +    +Y++I +S+ PSG G L  A E+ K++L + G 
Sbjct: 61  LSKMKFKLKVGDKILVYGAINLYIPRGEYKLIAQSITPSGIGELQLAFERLKEELSKLGY 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  + K P+P  PK IA+ITS TGA ++D+L+    R+ L +  +F V VQGD   ++IA
Sbjct: 121 FDIEKKKPLPKFPKRIALITSSTGAALQDMLRVAKKRWLLSKFYLFDVLVQGDGAAEDIA 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I + +           D+II+ RGGGS EDLW FN+ ++  AI  +  PIISA+GHE 
Sbjct: 181 RKIKKADEYIFDDG-DGFDLIIVGRGGGSKEDLWAFNERVVADAIYEAKTPIISAVGHEI 239

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+ ++D+ AD RA TP+ A E+A+P K  +   +  +    N     ++  K   L+ L 
Sbjct: 240 DYLISDFVADKRAATPSNAIEIALPDKNEMLMMIDEMINSFNFRYETILHKKEKILSHLF 299

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           +     +    L   +  +     +    +  II +K  +  ++    +    +  + + 
Sbjct: 300 ELFEANSIFNKLLEKQREIKFTKNQYLSKINSIIEKKENNLINLRKAFEIMSPLKKLHQQ 359

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITR 426
           ++ +    + ++  +K     I   K++++  L  L E    K R       I K   R
Sbjct: 360 KEEM----EFLKTSIKSVTSEILKMKEKQLNSLKELFEISNPKKREKEGFGEIIKNNKR 414


>gi|317181567|dbj|BAJ59351.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F57]
          Length = 420

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYIPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWWQRLDGFNVKLHRSFKILLHQKKVHLEHLAD 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELNNEKARASAEI 414


>gi|320101742|ref|YP_004177333.1| exodeoxyribonuclease VII large subunit [Isosphaera pallida ATCC
           43644]
 gi|319749024|gb|ADV60784.1| exodeoxyribonuclease VII, large subunit [Isosphaera pallida ATCC
           43644]
          Length = 519

 Score =  278 bits (711), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 197/362 (54%), Gaps = 9/362 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
             + P  SV+EL+  +  ++ ++ S V VRGE+S       SGH YF +KD+ + IDA+I
Sbjct: 97  PAELPILSVTELTALIDGVLRTDFSAVAVRGELSRI-SRAQSGHLYFRIKDDFAVIDAVI 155

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W+ T  ++ F   EG+E    G +  +     YQ+++ ++ P G G L  A  +R  +  
Sbjct: 156 WRSTAARLPFDLTEGLEVEARGGLEVYAPRGSYQLVLTAIEPRGVGALDLAYRQRLARFQ 215

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            EGLF    K   P  P  I V+TSP GA +RDILQ +  R+PL  VI+ P  VQG E  
Sbjct: 216 AEGLFDPARKRSRPAFPMRIVVVTSPVGAAVRDILQILGRRWPLAEVIVVPTVVQGAEAA 275

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
            +IA A+L  + L       RPD++I+ RGGGS+EDLW FN+E++VRAIA     +ISA+
Sbjct: 276 PQIAQALLMADRL------LRPDVMIVGRGGGSVEDLWAFNEEVVVRAIAACEHMVISAV 329

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D+TLAD  AD RA TP+ AAE+  P+ E L+ +L+    RL+  + R +      L
Sbjct: 330 GHEVDFTLADLVADQRAATPSEAAELCAPLAEKLREALVATRTRLDRALARRLHEASARL 389

Query: 308 NSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                 L  +    +  +R R++RL   L+  +   + R+      +  R+ +   +  +
Sbjct: 390 ALARSGLERAGRALILQTRNRVERLADRLDRAMRADLLRRRATLRALAGRLDALSPLAIL 449

Query: 367 QK 368
            +
Sbjct: 450 AR 451



 Score =  100 bits (248), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 47/156 (30%), Gaps = 13/156 (8%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +K R+ ++  +  +++ +    R +             L    +  I      +++L  R
Sbjct: 361 EKLREALVATRTRLDRALA---RRLHEASARLALARSGLERAGRALILQTRNRVERLADR 417

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN----------FITQK 476
           ++  +   +     ++      L + +    L RGY+     +++           +   
Sbjct: 418 LDRAMRADLLRRRATLRALAGRLDALSPLAILARGYSLTLLEDDSATCGPPQRPLVVRDA 477

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512
             L    R+      G   + V       E   +  
Sbjct: 478 TCLKPGDRLRTRLAQGMVLSRVEAVEAGDEPNKEHA 513


>gi|323140956|ref|ZP_08075868.1| exodeoxyribonuclease VII, large subunit [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414559|gb|EFY05366.1| exodeoxyribonuclease VII, large subunit [Phascolarctobacterium sp.
           YIT 12067]
          Length = 401

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 207/364 (56%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    YSVSE++  +KHI+E    L ++ V GEIS ++    SGH YF+LKD  + +  +
Sbjct: 1   MTEAVYSVSEINNFIKHILEQEPELRNLQVVGEISNFKRYP-SGHCYFTLKDAGAVLKCV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     + F P+ G   + +G++  +     YQ+  + L+  G G L+ A EK K+KL
Sbjct: 60  MFRSKAVNLRFQPQNGDTVVAVGRLAVYERDGVYQLYTDLLLQQGVGDLMQAYEKLKQKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
              GLF+ + K  +P  P+ + +ITSP GA +RD++     R   ++++++PVKVQG+  
Sbjct: 120 ERAGLFAPERKQQLPLHPRTVGIITSPAGAAVRDVITVSRRRNQGIKLLLYPVKVQGEGA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EIA AI   N           D++I+ RGGGSIEDLW FN+E+ VRA+A S IP++SA
Sbjct: 180 AAEIAAAIEFFNR------KKLADVLIVGRGGGSIEDLWAFNEEITVRAVAASKIPVVSA 233

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+TL D+AAD+RA TP+ AAE+ V   E  +  ++ LE R  +++  L+  +   
Sbjct: 234 VGHETDFTLCDFAADVRAATPSQAAELVVADVEGYKQRVVYLEQRARSLLSALLTQQQRR 293

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L++L+ +  L + ++  +    RLD   R L   LE+ + +          R+ S   + 
Sbjct: 294 LDNLVNSWALRDPERLFADQAQRLDTASRRLREALELHLQQDEHKLALAAARLDSLSPLA 353

Query: 365 NIQK 368
            + +
Sbjct: 354 VLGR 357



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 2/133 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +Q ++  +Q    ++         +++    +        +         +     R+  
Sbjct: 269 KQRVVYLEQRARSLLSAL--LTQQQRRLDNLVNSWALRDPERLFADQAQRLDTASRRLRE 326

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L   ++     +++    L S +    L RGY+  Q ++   ++   +L     +L   
Sbjct: 327 ALELHLQQDEHKLALAAARLDSLSPLAVLGRGYSVSQKSDYTLVSSVDDLRWGDELLTTV 386

Query: 490 FDGQANAIVINKA 502
            DG   ++V    
Sbjct: 387 ADGVITSVVQQVE 399


>gi|149019199|ref|ZP_01834561.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP23-BS72]
 gi|147931069|gb|EDK82048.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP23-BS72]
          Length = 446

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D+II+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLIIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|188527066|ref|YP_001909753.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470]
 gi|226736765|sp|B2US91|EX7L_HELPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|188143306|gb|ACD47723.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470]
          Length = 420

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKNIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYPFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|3869268|gb|AAC77362.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens]
          Length = 401

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 118/443 (26%), Positives = 197/443 (44%), Gaps = 57/443 (12%)

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +++   +++    ++    ++G+   V GK++ F G   YQ+I++++ P+G G L  A 
Sbjct: 1   GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF 60

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           +  K+KL  EGLFS + K P+P  P+ I +I+SPTGAVIRDI+     R P + + + P 
Sbjct: 61  DALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPT 120

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E   +I  A+   +           D +ILARGGGS+EDLW FN+E + RA+   
Sbjct: 121 AVQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDAC 173

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P   HL   + NL  RL  ++   
Sbjct: 174 VTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNR 233

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRI 357
           + +    L  + + L +  + L     RLD L          E  +  +      +  R+
Sbjct: 234 LSHDRLRLEGMARRLRHPGERLRQQAQRLDDLDMPPCARSAFERSLNTRRERLIRLETRL 293

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   +   RQ +    + + + +++ L+   L+ + +                   
Sbjct: 294 AGQHPGRQLALLRQRLDSLAERLPRAMREGLKARRLQLQSQ------------------- 334

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                                        + L   +   TL RGY+ + D     I    
Sbjct: 335 ----------------------------MQTLHVVSPLATLGRGYSILLDERGQAIRNAV 366

Query: 478 NLATKTRILINFFDGQANAIVIN 500
              T  R+     +GQ    V +
Sbjct: 367 QTHTGQRLTARLGEGQLQVRVED 389


>gi|167823046|ref|ZP_02454517.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           9]
          Length = 277

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/262 (38%), Positives = 157/262 (59%), Gaps = 8/262 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVP 276
           +AD+AAD+RAPTPTGAAE+  P
Sbjct: 254 IADFAADVRAPTPTGAAELVSP 275


>gi|78776880|ref|YP_393195.1| exodeoxyribonuclease VII large subunit [Sulfurimonas denitrificans
           DSM 1251]
 gi|123550575|sp|Q30SS1|EX7L_SULDN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|78497420|gb|ABB43960.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas denitrificans
           DSM 1251]
          Length = 416

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 137/490 (27%), Positives = 216/490 (44%), Gaps = 81/490 (16%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS L+  +K ++E + S V V GE+S     HSSGH YF+LKD +S I A+I+K    
Sbjct: 4   LSVSSLNEQIKALLEESFSRVLVEGELSRITF-HSSGHIYFTLKDENSTIKAVIFKANAA 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F  +EG++ ++ G IT +    +YQI   S+ P+G G L  A E+ K +L  +G F 
Sbjct: 63  KLKFQLQEGLKVILDGAITLYKPRGEYQINCFSISPAGHGALALAYEQLKNRLASKGYFE 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
              K  +P  PK IA+ITS TGA + D+L+    R+  + + I+ V VQGD     I  A
Sbjct: 123 SSRKKQLPKFPKRIALITSATGAAVADMLRVAMSRYRAIEIDIYDVLVQGDNAAPSIIRA 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +T          DII+L RGGGSIEDLW FN+E++  AI ++  PIISA+GHE DW
Sbjct: 183 LSLADT-------KGYDIIVLGRGGGSIEDLWAFNEEIVADAIFSAITPIISAVGHEIDW 235

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ ADLRAPTP+ A EM +P ++                                  
Sbjct: 236 VISDFVADLRAPTPSAAMEMCLPDEK---------------------------------- 261

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                         +D L    E  +   ++   +   HI    +   +   I    + I
Sbjct: 262 ---------ELYQFIDSLVARYEQMISQKLYGVKQELEHISRLYQDHSIEKKISYKLEEI 312

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            + +      +   ++                           +  ++ +  R    +  
Sbjct: 313 AQLKLSFTNSIYFKMQS-------------------------FNKEVESIKIRFPNAIQS 347

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD-G 492
           +I      V    ++L+S   +   K+G+  I   ++  I    +L       +   D  
Sbjct: 348 RINIVQNQVLTLQKMLESNHPRLKTKKGFAQI-SKDSKVI-DIESLIVDEVFDL-MSDRV 404

Query: 493 QANAIVINKA 502
             +A VINK 
Sbjct: 405 VISAKVINKK 414


>gi|108562686|ref|YP_627002.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori HPAG1]
 gi|122386734|sp|Q1CUP4|EX7L_HELPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|107836459|gb|ABF84328.1| exonuclease VII, large subunit [Helicobacter pylori HPAG1]
          Length = 420

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 121/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPICELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTRNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAD 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 FLKRLS--FENKHHLNALKLEQLKIALENKTLEFLRFKKTLLEKISTQALTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFLSKNNQAIELEALKAGDKIELSNEKARASAEI 414


>gi|148993817|ref|ZP_01823219.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP9-BS68]
 gi|168489035|ref|ZP_02713234.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           SP195]
 gi|147927642|gb|EDK78667.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP9-BS68]
 gi|183572546|gb|EDT93074.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           SP195]
 gi|332073548|gb|EGI84027.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA17570]
          Length = 446

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D+II+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLIIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     +R +  K     
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293

Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                       ++       RLD+L   L+ +L   I    +      +++     +  
Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           IQ+ +  + +  + +   +         E K                             
Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                               +  L        + RGY  ++    + +    +L  K ++
Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DGQ    V +    +
Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445


>gi|167909838|ref|ZP_02496929.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           112]
          Length = 292

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/275 (37%), Positives = 161/275 (58%), Gaps = 8/275 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQ 288


>gi|320529118|ref|ZP_08030210.1| exodeoxyribonuclease VII, large subunit [Selenomonas artemidis
           F0399]
 gi|320138748|gb|EFW30638.1| exodeoxyribonuclease VII, large subunit [Selenomonas artemidis
           F0399]
          Length = 403

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 128/358 (35%), Positives = 191/358 (53%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+++ ++K + E    LS + +RGE+S ++    SGH YF+LKD  + +  +++ G  
Sbjct: 5   SVSDVTRYIKSMFEGEAILSDILIRGELSNFKRYP-SGHCYFTLKDAAASMKCVMFNGYA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +V G I+ +     YQ+   S+   G+G L  A E+ K+KL  EGLF
Sbjct: 64  RNLRFTPENGMQVIVGGNISVYERDGAYQLYATSINVEGAGMLALAFEQLKEKLRAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
            + HK P+P  PK I ++TS  GAV+RDI +    R+  +R+++ PV VQG E   +IA 
Sbjct: 124 DEAHKKPLPRFPKRIGIVTSEAGAVLRDIYKVSKRRWNGVRLVLHPVLVQGTEAAGQIAA 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS EDLW FN+E +VRAI  S IP+ISA+GHETD
Sbjct: 184 AIRFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEPVVRAIYASRIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310
            TLAD+AAD RA TP+ AAE AVP    +   +  L  RL+    R +      L     
Sbjct: 238 TTLADFAADRRAATPSQAAEFAVPDGAEIARQIAGLSTRLDTARKRHLVQAQMRLQTLHE 297

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                N    L+    R DR+ + L    +             + R++    +  + +
Sbjct: 298 HPWRRNPKLLLARYMQRTDRMTQRLLDAADRRRSDLRHRLELALRRLELLNPVQLLYR 355



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 52/136 (38%), Gaps = 3/136 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I      ++   K+H   +  + + +    H  R   K  +        ++  R+   
Sbjct: 268 RQIAGLSTRLDTARKRH--LVQAQMRLQTLHEHPWRRNPKLLLARYMQRTDRMTQRLLDA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              +       + +  R L+       L RG++ ++  +   +++ + L+    + I F 
Sbjct: 326 ADRRRSDLRHRLELALRRLELLNPVQLLYRGFSIVE-KDGKTVSRAKELSPGDAVCITFA 384

Query: 491 DGQANAIVINKAPPKE 506
           DG+ +A+V + A   +
Sbjct: 385 DGKVSAVVADGAKEAQ 400


>gi|167844608|ref|ZP_02470116.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           B7210]
 gi|167917864|ref|ZP_02504955.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           BCC215]
          Length = 285

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/268 (38%), Positives = 159/268 (59%), Gaps = 8/268 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           +AD+AAD+RAPTPTGAAE+  P +  L 
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLL 281


>gi|91788806|ref|YP_549758.1| exodeoxyribonuclease VII large subunit [Polaromonas sp. JS666]
 gi|91698031|gb|ABE44860.1| Exodeoxyribonuclease VII large subunit [Polaromonas sp. JS666]
          Length = 436

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/371 (29%), Positives = 192/371 (51%), Gaps = 9/371 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            + V  L   +   +E+  + V V+GEI+G+    +SGH YFSLKD   ++   +++   
Sbjct: 22  VWPVGSLLRAIADSLEARFNPVAVQGEITGF-SRAASGHCYFSLKDEQGQVRCAMFRRAA 80

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + ++F P +G    + G++  +    + Q+++ES+  +G G L       K KL  EGLF
Sbjct: 81  SLLDFAPRDGQLVELRGRLGVYEPRGELQLVVESMRQAGQGNLFEQFLVLKAKLEAEGLF 140

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K  +P +P+ I V+TS   A + D++  +  R P + V+I+P  VQG +   E+  
Sbjct: 141 DAGRKRALPMLPRAIGVVTSLGAAALHDVVSALQRRVPHIPVVIYPASVQGGQAAGELRE 200

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+L+     E       D+++L RGGG++EDLW FNDE + R I +S +P+IS +GHETD
Sbjct: 201 ALLKAYRRDE------VDVLLLVRGGGAMEDLWAFNDEQLARTIVSSPVPVISGVGHETD 254

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+AD+ AD+RAPTPT AAE+    +     +L  +  R+   + R ++     L+    
Sbjct: 255 FTIADFCADVRAPTPTAAAELCAQPQTVWLDTLGLVLQRMQRAVDRQLQSHAQRLDWAAD 314

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            +      ++  + RL  L + L H +   +  +      +   +  +    ++Q +RQ 
Sbjct: 315 RVSRPSHLVTRQQARLAGLAQNLRHAMRSALTHETLRVQALGAELPREV-AGSLQHSRQR 373

Query: 373 ILEKQQHIEQI 383
           +   Q  +E +
Sbjct: 374 VERAQLRLELL 384



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 49/143 (34%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +    +   + +  Q   ++       V +    +  ++     +   LR   ++ + + 
Sbjct: 289 LVLQRMQRAVDRQLQSHAQRLDWAADRVSRPSHLVTRQQARLAGLAQNLRHAMRSALTHE 348

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              ++ L   +   ++  ++     V      L+    K  L+RGY  + D   + IT+ 
Sbjct: 349 TLRVQALGAELPREVAGSLQHSRQRVERAQLRLELLDPKLVLQRGYAWLADMQGHPITRA 408

Query: 477 RNLATKTRILINFFDGQANAIVI 499
           R       +     DG+ +  V 
Sbjct: 409 RATHPGQAVRATLADGEVDLTVS 431


>gi|317012103|gb|ADU82711.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           Lithuania75]
          Length = 420

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G ++ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I   +  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADTLHFAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNSLENALKLAHANLKLPQ 378


>gi|317180064|dbj|BAJ57850.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F32]
          Length = 420

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQIK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|217033450|ref|ZP_03438880.1| hypothetical protein HP9810_1g64 [Helicobacter pylori 98-10]
 gi|216944155|gb|EEC23583.1| hypothetical protein HP9810_1g64 [Helicobacter pylori 98-10]
          Length = 420

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           ++   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L   +       +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLN--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|222528994|ref|YP_002572876.1| exodeoxyribonuclease VII large subunit [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455841|gb|ACM60103.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 454

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 130/499 (26%), Positives = 211/499 (42%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ ++GE+   R   S  H YF LKD    +
Sbjct: 4   SNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +           + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDK---NVEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA IRDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN+EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTEEP------VEVIIVGRGGGAFEDLMAFNNEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PIISA+GHE D+ L+D+ AD+RA TPT A EM V  ++     LI  + ++ + I +   
Sbjct: 233 PIISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLIEYQKKMKSAIEKKFN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                +  L   L       T++     +D    +L   +   +   +R+  +   R+  
Sbjct: 293 NVKEKVGILQYKLYQNSPANTVAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + + +  K+  +      K  +                    
Sbjct: 353 LNPESRLSIARTNFDICSKRLGEAFKKIFQQKEFAYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTSISQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
           +    I+    DG   + V
Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443


>gi|150403666|ref|YP_001330960.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis
           C7]
 gi|150034696|gb|ABR66809.1| Exodeoxyribonuclease VII [Methanococcus maripaludis C7]
          Length = 407

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 205/365 (56%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      +VSEL+ ++K  +E +  L    ++GEIS    +H SGH YF+LKD +S ID 
Sbjct: 8   SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSVIDC 66

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++K     + F P EG+  ++ GK++ +  + KYQ    S+   G G L    EK K+K
Sbjct: 67  VMFKPYTKNLNFSPTEGMSVILKGKVSLYTKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L +EGLF + +K  IP  PK I +ITSPTGA I+DI++    R   + +II+P  VQG+ 
Sbjct: 127 LEKEGLFDETNKQKIPKYPKNIGIITSPTGAAIKDIIKVTRNRNSSVNLIIYPAIVQGES 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K +   +L+LN L       + D+II+ARGGGS+EDLW FNDE + RAI  S  P+++
Sbjct: 187 AAKTVIAGLLELNKL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T++D+ +DLRA TP+ AAE+ V  +  L+S + N E  L + +   I  +  
Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYNENELKSMVNNFERILKHRMKIEIANRSY 300

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L+ L   +   +    +   +  ++R+   + H ++  I  + + F    + + +   +
Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLYIERIMTLMNHEIKNKISYELKRFEKSYSLLNAYNPL 360

Query: 364 HNIQK 368
           + + K
Sbjct: 361 NVLNK 365



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 2/133 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426
           N   +     + E+I+K  ++     +  ++ IL+  + +   K++I     +I++++T 
Sbjct: 272 NENELKSMVNNFERILKHRMKIEIANRSYELDILYSKIEKNSPKSKIEKQKLYIERIMTL 331

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   + +KI         +  +L ++   N L +GY+ IQD N+N +  K +  T+  + 
Sbjct: 332 MNHEIKNKISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENDNVMNSKNSFKTENNVK 391

Query: 487 INFFDGQANAIVI 499
           I   DG  +A + 
Sbjct: 392 ITLKDGTIDAHIT 404


>gi|261839115|gb|ACX98880.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 52]
          Length = 420

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKALLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|312622737|ref|YP_004024350.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203204|gb|ADQ46531.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 454

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 130/499 (26%), Positives = 211/499 (42%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ ++GE+   R   S  H YF LKD    +
Sbjct: 4   NNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +           + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDK---NVEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA IRDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTEEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PIISA+GHE D+ L+D+ AD+RA TPT A EM V  ++     LI  + R+ + I +   
Sbjct: 233 PIISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLIEYQKRIKSAIEKKFN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                +  L   L       T++     +D    +L   +   +   +++  +   R+  
Sbjct: 293 NVKEKVGILQYKLYQNSPSNTIAKCAQDIDLYSHKLSFAISKKLHEAHKNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +    ++ + +  K+  +      K  +                    
Sbjct: 353 LNPESRLSIARTNFDICRKRLGEAFKKIFQQKEFVYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTSISQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
           +    I+    DG   + V
Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443


>gi|167580076|ref|ZP_02372950.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           TXDOH]
          Length = 295

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/282 (36%), Positives = 165/282 (58%), Gaps = 8/282 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K  +P  P+ I V+TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           +AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   +
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGL 295


>gi|317471817|ref|ZP_07931154.1| exonuclease VII [Anaerostipes sp. 3_2_56FAA]
 gi|316900708|gb|EFV22685.1| exonuclease VII [Anaerostipes sp. 3_2_56FAA]
          Length = 402

 Score =  277 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 14/374 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  +SV++++ ++K I +S+  L+ + ++GE+S  +  HSSGH YFSLKD+ S+I  +++
Sbjct: 2   NKVFSVAQINAYIKRIFQSDYALNRIYIKGEVSNCK-YHSSGHIYFSLKDDKSQISCVMF 60

Query: 70  KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
               ++ ++F  E G   +V G I+ F  +  YQ+    +   G G L    EK K+KL 
Sbjct: 61  ANQRISGLDFEMENGQTVIVSGSISVFERNGTYQLYANEISLDGIGRLYVEFEKLKEKLY 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  + K PIP  PK I ++T+ TGA I DI+     R P ++++++P +VQGD   
Sbjct: 121 REGLFDHEKKKPIPQNPKTIGIVTAKTGAAIHDIMSVAKRRNPYIQLVLYPAQVQGDGAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I   I  L+           D II+ RGGGSIEDLW FN+E + RAI  +  PIIS  
Sbjct: 181 ETIVRGIETLDR-------YGVDTIIIGRGGGSIEDLWAFNEEKVARAIYAAKTPIISGT 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+ADYAADLRA TPT A E+AVP       ++   +  L+  I  +++     L
Sbjct: 234 GHEVDTTIADYAADLRAATPTAACELAVPDLRETLDAIDARKRSLSVQIRHILRNYELRL 293

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 L   D  L     R+    L   L   ++ +  R          R+        
Sbjct: 294 EQYSGKLRRFDPKLQLQEQRMTLAELEDRLTKRMDYLRNRYQHRLELYAQRLHGLSPTAK 353

Query: 366 IQKNRQHILEKQQH 379
           +     ++ ++   
Sbjct: 354 LIGGYGYLSDQSGQ 367



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 2/141 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++    I  +++ +   ++  LR   L  ++    L   R   K ++      + +L  
Sbjct: 264 LRETLDAIDARKRSLSVQIRHILRNYELRLEQYSGKL--RRFDPKLQLQEQRMTLAELED 321

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   + +        + +  + L   +    L  GY  + D +   +   +++A    I
Sbjct: 322 RLTKRMDYLRNRYQHRLELYAQRLHGLSPTAKLIGGYGYLSDQSGQPVVSAKHIAKGDEI 381

Query: 486 LINFFDGQANAIVINKAPPKE 506
            I   DG     V      K+
Sbjct: 382 QITISDGSLKTKVSEVTLNKK 402


>gi|242310742|ref|ZP_04809897.1| exodeoxyribonuclease 7 large subunit [Helicobacter pullorum MIT
           98-5489]
 gi|239523140|gb|EEQ63006.1| exodeoxyribonuclease 7 large subunit [Helicobacter pullorum MIT
           98-5489]
          Length = 416

 Score =  277 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 128/475 (26%), Positives = 216/475 (45%), Gaps = 80/475 (16%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+  +K ++E+    V V GE+S     HSSGH YFS+KD  S +  ++++G   
Sbjct: 4   LSVSELNLQIKSLLEATFLQVSVCGEVSNCT-YHSSGHIYFSIKDKDSALKCVMFRGNAR 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F  E+G++  + G IT +    +YQ+   S IPSG G L  A E+ KK    +G F+
Sbjct: 63  NLKFKIEDGMDLTLNGGITLYTPRGEYQLNCLSAIPSGIGELTLAFEQLKKDYEAKGYFN 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           ++    IP  P  IA+ITS +GAV++D+L+    R+  +   +    VQG+   + IA  
Sbjct: 123 NKKS--IPRFPYKIALITSKSGAVLQDMLRIAKRRWNLIEFTLMDTLVQGEGAKENIARN 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   ++L         D I++ARGGGS+EDLW FN+ +++ AI  +  PIISAIGHE D+
Sbjct: 181 IQYADSL-------GFDCIVIARGGGSLEDLWAFNEPLVIEAIYQAKTPIISAIGHEPDF 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D+ ADLRAPTP+ A EM +P K     +L  L+  L+N I                 
Sbjct: 234 VLSDFVADLRAPTPSAAMEMLLPDKLEWLMNLDLLQKNLDNKI----------------- 276

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                                     ++I+++KY+   H+   ++ +     ++  +Q +
Sbjct: 277 --------------------------QMILYQKYKKLEHLEILLQKNSFFAKLENYKQQL 310

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
               + + Q                                  +  ++ L + +E  +  
Sbjct: 311 SLCYKLLTQNFSSKW-------------------------IKYNYLLESLPSLLEQKMLK 345

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            +      +S+    L+    +N  K+GY       N  I     +   + +++ 
Sbjct: 346 ILHKKLNELSLLKAKLEVKNPQNNQKKGYVYA-SFQNKPIKTLDEIPLDSVLILE 399


>gi|312793192|ref|YP_004026115.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180332|gb|ADQ40502.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 454

 Score =  277 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 127/499 (25%), Positives = 209/499 (41%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ ++GE+   +   S  H YF LKD    +
Sbjct: 4   NNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +    +      + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA +RDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAVRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L+D+ AD+RA TPT A EM V  ++     L   + R+ + + +   
Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLNEYQKRMKSAMGKTFN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                   L   L       T++     +D    +L   +   +   +R+  +   R+  
Sbjct: 293 MVKEKAGMLQYKLYQNSPANTIAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + + +  K+  +    E K  +                    
Sbjct: 353 RNPESRLSVARTNFDNCSRRLGEAFKKIFQQKEFEYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTIAQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
                I+    DG   + V
Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443


>gi|289450046|ref|YP_003475511.1| exodeoxyribonuclease VII large subunit [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289184593|gb|ADC91018.1| exodeoxyribonuclease VII, large subunit [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 444

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 79/493 (16%)

Query: 13  PEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           PE+SV+E++ ++  ++    +LS   + GE+SG +  +SSGH YF++KD  +++  +++ 
Sbjct: 17  PEHSVAEVAAYIHKLIRRSADLSAYWICGELSGVK-RYSSGHIYFTIKDEQAQLSCVMYN 75

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
              +++ F  ++G +  +  KI  +    + Q+I+ ++  +GSG L       K+KL  E
Sbjct: 76  SNASRLSFPLKDGKKVKLRCKIDFYEARGQCQLIVLAVEEAGSGQLYAKYLALKEKLAAE 135

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++    P+   P+ + VITSP+GAVI+DI      RFP   ++++P  VQG+     
Sbjct: 136 GLFANARPLPLL--PRRVGVITSPSGAVIQDICNVSCRRFPAADILLYPAAVQGETAAAT 193

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +   IL  N L         D+II+ RGGGSIEDLW FNDE + RA+A S IP++SA+GH
Sbjct: 194 LRRGILLFNRL------KNVDVIIIGRGGGSIEDLWPFNDEELARAVAASEIPVVSAVGH 247

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+T+ D+ AD RAPTP+ AAEM  PV++ LQ+ +   E R+   + R  +      + 
Sbjct: 248 ETDYTICDFVADHRAPTPSAAAEMVWPVRDELQTRIAGAERRMAFALERNWEAANFRYSH 307

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                                           ++ + +  +   INR+++   +   ++N
Sbjct: 308 CA--------------------AHFTATQAAALLNKFFSAWQTAINRLQNQHPLRQTERN 347

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
              I    +++     QH+RYI L+K+++  +              +             
Sbjct: 348 HSQI----ENLFAAASQHIRYILLQKEQQWRLQTEKLNNLNPLNVLM------------- 390

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                                         RG+  + D N+        +     I +  
Sbjct: 391 ------------------------------RGFGLVTDKNDAVAVSTAKILPGDNIKVTL 420

Query: 490 FDGQANAIVINKA 502
            DG+    V+   
Sbjct: 421 QDGKLACKVLAVE 433


>gi|266620365|ref|ZP_06113300.1| exodeoxyribonuclease VII, large subunit [Clostridium hathewayi DSM
           13479]
 gi|288868037|gb|EFD00336.1| exodeoxyribonuclease VII, large subunit [Clostridium hathewayi DSM
           13479]
          Length = 425

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/373 (29%), Positives = 190/373 (50%), Gaps = 14/373 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K++   +   + + ++GE+S  +  H+SGH YF+LKD  + I  +++ G
Sbjct: 4   VYSVSQVNAYIKNMFAQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDRGAAIACVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  EEG + +  G +  +    +YQ+  + +   G G L    +K + +L E G
Sbjct: 63  QRKGLSFKLEEGQKVVAKGSVEVYERDGRYQLYAQEITKEGVGDLFERFQKLRDELEEMG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +FS ++K PIP     + ++T+ TGA IRDI+   + R P +++ ++P  VQG+     I
Sbjct: 123 MFSPEYKQPIPRYAGKVGIVTAQTGAAIRDIMNISARRNPYVQLYLYPALVQGENAKYSI 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L+ L         D++I+ RGGGSIEDLW FN+E++ RAI     P+ISA+GHE
Sbjct: 183 VKGIETLDRL-------GLDVLIVGRGGGSIEDLWAFNEEIVARAIFACRTPVISAVGHE 235

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY AD+RAPTP+ AAE+AV      +  +      L   + R ++         
Sbjct: 236 TDVTIADYVADMRAPTPSAAAELAVFDYSQFEGQVELYRDALGKSMARKLERYRYQTEQF 295

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L +  + +   R R   L  +L++ +   I           +R+    +     +
Sbjct: 296 RLRFQLFDPRRQVREQRQRAVDLEEKLKNMMASRIVTDKNRAAEAESRL-RQLIEKQAVR 354

Query: 369 NRQHILEKQQHIE 381
           +R  +      ++
Sbjct: 355 DRHRLELISSRLD 367



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 48/137 (35%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R     +Q  +   +    R +  +++  + +   L+    +RI        +  +R+ 
Sbjct: 286 ERYRYQTEQFRLRFQLFDPRRQVREQRQRAVDLEEKLKNMMASRIVTDKNRAAEAESRLR 345

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            ++  +       + + +  L   +    +  GY  + D  N  I     +     I + 
Sbjct: 346 QLIEKQAVRDRHRLELISSRLDGLSPLKKIGGGYGFLTDGKNRRIESVDQVKQGDPIKVR 405

Query: 489 FFDGQANAIVINKAPPK 505
             DG+ +A+V + A   
Sbjct: 406 IRDGRIDAVVSDTAAAD 422


>gi|313896572|ref|ZP_07830121.1| exodeoxyribonuclease VII, large subunit [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312974757|gb|EFR40223.1| exodeoxyribonuclease VII, large subunit [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 403

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 127/358 (35%), Positives = 192/358 (53%), Gaps = 12/358 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+++ ++K + E    LS + +RGE+S ++    SGH YF+LKD  + +  +++ G  
Sbjct: 5   SVSDVTRYIKSMFEGEAILSDILIRGELSNFKRYP-SGHCYFTLKDAAASMKCVMFNGYA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F PE G++ +V G I+ +     YQ+   S+   G+G L  A E+ K+KL  EGLF
Sbjct: 64  RNLRFTPENGMQVIVGGNISVYERDGAYQLYATSINVEGAGMLALAFEQLKEKLRAEGLF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
            + HK P+P  PK I ++TS  GAV+RDI +    R+  +R+++ PV VQG E   +I+ 
Sbjct: 124 DEAHKKPLPRFPKRIGIVTSEAGAVLRDIYKVSKRRWNGVRLVLHPVLVQGTEAAGQISA 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI   N           D++I+ RGGGS EDLW FN+E +VRAI  S IP+ISA+GHETD
Sbjct: 184 AIRFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEPVVRAIYASRIPVISAVGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310
            TLAD+AAD RA TP+ AAE AVP    +   +  L  RL+    R +      L     
Sbjct: 238 TTLADFAADRRAATPSQAAEFAVPDGAEIARQIAGLSTRLDTARKRHLAQAQMRLQTLHE 297

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                N    L+    R DR+ + L    +       +     + R++    +  + +
Sbjct: 298 HPWRRNPKLLLARYMQRTDRMTQRLSDAADRRRSDLRQRLELALRRLELLNPVQLLYR 355



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 50/136 (36%), Gaps = 3/136 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I      ++   K+H      + + +    H  R   K  +        ++  R+   
Sbjct: 268 RQIAGLSTRLDTARKRH--LAQAQMRLQTLHEHPWRRNPKLLLARYMQRTDRMTQRLSDA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              +       + +  R L+       L RG++ ++  +   + + + L+    + I F 
Sbjct: 326 ADRRRSDLRQRLELALRRLELLNPVQLLYRGFSIVE-KDGKTVRRAKELSPGDAVCITFA 384

Query: 491 DGQANAIVINKAPPKE 506
           DG+ +A+V + A   +
Sbjct: 385 DGKVSAVVADGAKEAQ 400


>gi|331002442|ref|ZP_08325960.1| exodeoxyribonuclease VII [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410258|gb|EGG89692.1| exodeoxyribonuclease VII [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 392

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 116/358 (32%), Positives = 194/358 (54%), Gaps = 13/358 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K++   +   + + V GE+S      +S H YF++KD    + A+++  
Sbjct: 2   VYSVSKVNAYIKNMFMQDFVLNKISVEGEVSNCT-YANSNHIYFTIKDEGGTLSAVMFAS 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  + G + +V G I+ +    KYQ+    +  +G G L     + K+KL + G
Sbjct: 61  QRGGLSFDMKRGQKVIVTGNISCYEKEGKYQLYASKIEEAGKGDLYEKYLQLKEKLEDMG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+  +K  IP   + I V T+ TGAVI DI      R P +R+++ P  VQG+  PK I
Sbjct: 121 MFNQSYKREIPRFVQSIGVATAQTGAVINDIQNVSYRRNPYVRIVLAPCLVQGEMAPKSI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +AI +L+ +         D++I+ RGGGSIEDL+ FNDE +   I N+  PIISA+GHE
Sbjct: 181 ISAIKKLDKM-------NLDVLIVGRGGGSIEDLYCFNDEELANTIFNAKTPIISAVGHE 233

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRAPTP+ AAE+A  + +    +L   + +L+  + R I Y    L+ L
Sbjct: 234 TDFTIADFVADLRAPTPSAAAEIANFIYDDYMYTLDYYKRKLSESVERKIDYAKRDLDML 293

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L  L   +    L   + RL+   + L+++    +  K     ++  R++S   +  +
Sbjct: 294 LIRLNTLSPQIRLREQKQRLENFSKILQNSFRNTLENKKISLENLAKRLESSSPLKRL 351



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 2/126 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ + + V++ + Y   +    +  L+ L    + R+      ++     ++    
Sbjct: 268 LDYYKRKLSESVERKIDYAKRDLDMLLIRLNTL--SPQIRLREQKQRLENFSKILQNSFR 325

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           + +++   S+    + L+S +    L  GY  I D NN  +   + L     I I F DG
Sbjct: 326 NTLENKKISLENLAKRLESSSPLKRLSGGYAYISDENNKKVLSAKTLKPDEEINIFFSDG 385

Query: 493 QANAIV 498
           +  A V
Sbjct: 386 KLRAKV 391


>gi|302872149|ref|YP_003840785.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575008|gb|ADL42799.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 454

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 127/499 (25%), Positives = 208/499 (41%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ ++GE+   R   S  H YF LKD    +
Sbjct: 4   NNVVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +    +      + G + LV G +  +      ++ I  +   G G L   L++
Sbjct: 62  KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKITEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA IRDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLKQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V  +      L     R+ + + ++  
Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVSFQNKALEKLNEYHKRMKSAMEKIFN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                +  L   L       T++     +D    +L   +   +   +++  +   R+  
Sbjct: 293 IVKEKVGILQYKLYQNSPANTIAKRAQDIDLYCNKLSFAISRKLHEVHKNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + + +  K+  +      K  +                    
Sbjct: 353 ANPESRLSIARTNFDNCSRRLGEAFKKIFQQKEFMYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTIAQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
                I+    DG   + V
Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443


>gi|297379484|gb|ADI34371.1| exodeoxyribonuclease VII, large subunit [Helicobacter pylori v225d]
          Length = 420

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 190/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L      L+  K   L  L  
Sbjct: 241 FLLSDLIADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLRRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|167814575|ref|ZP_02446255.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           91]
          Length = 272

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 100/259 (38%), Positives = 156/259 (60%), Gaps = 8/259 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P++  +GHETD+T
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEM 273
           +AD+AAD+RAPTPTGAAE+
Sbjct: 254 IADFAADVRAPTPTGAAEL 272


>gi|332673100|gb|AEE69917.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 83]
          Length = 424

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           ++   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDSVADLRASTPSNAMEILLPSSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLET 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K    ++ L +
Sbjct: 357 -TERLNRLENALKLAHAHLKLPQ 378


>gi|78188299|ref|YP_378637.1| exodeoxyribonuclease VII large subunit [Chlorobium chlorochromatii
           CaD3]
 gi|78170498|gb|ABB27594.1| Exodeoxyribonuclease VII large subunit [Chlorobium chlorochromatii
           CaD3]
          Length = 407

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 200/358 (55%), Gaps = 8/358 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               N++D    SV+EL+ H+K  +ES    V VRGEIS  +  HSSGH Y +LKD+ ++
Sbjct: 1   MEAINAMDA--LSVTELTAHIKSELESLFPFVRVRGEISNCK-QHSSGHIYLTLKDSGAQ 57

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           + A+IWK T + +   P++G+E +  G++  +P S +YQ+I   +  +G G L  A  + 
Sbjct: 58  LPAVIWKSTASLLSIRPKDGMEVVAEGRLELYPPSGRYQLICRHVAQAGVGALQQAFAEL 117

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
            +KL   G F +  K  +P IP  I +ITSPTGAVI D+ + ++ RFP  R+ ++PVKVQ
Sbjct: 118 VQKLAALGYFDENRKKTLPTIPTTIGIITSPTGAVIEDMSKVLARRFPAARIALYPVKVQ 177

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    +EIA A+   N     +   +P +II+ARGGGS+EDL  FN+E++  AI  S+IP
Sbjct: 178 GAGAAEEIAQALDFFN--HTKKKQWKPQVIIVARGGGSLEDLQPFNEEIMAHAIYRSAIP 235

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +ISA+GHETD T+AD  AD+RA TP+ AAE+ VP    +   +  + A    I+   I+ 
Sbjct: 236 VISAVGHETDITIADMVADVRAGTPSIAAELVVPDSAQVLRDVEQMVAYAQQILNNKIEG 295

Query: 303 KINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               L+      A       +      LDR    +  ++E    ++ +     I ++ 
Sbjct: 296 AERELHSLCNSYAFNRPILKMQQCYENLDRFEASMMRSVETTYRQQIQRCTASIQQLN 353



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           I   +        ++   Q +   QQ +   ++   R +                +   +
Sbjct: 262 IAAELVVPDSAQVLRDVEQMVAYAQQILNNKIEGAERELHSLCNSYA------FNRPILK 315

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +   + ++ +    +   +    +      + + + L    Y  TL+RGY  I+  N  F
Sbjct: 316 MQQCYENLDRFEASMMRSVETTYRQQIQRCTASIQQLNLLDYHKTLERGYALIK-KNGRF 374

Query: 473 ITQKRNLATKTRILINFFDGQANAIVI 499
           +T  + L     I +   DG   A V 
Sbjct: 375 VTSAKALQPNDTIELLLHDGVRKASVK 401


>gi|317177074|dbj|BAJ54863.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F16]
          Length = 420

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 122/399 (30%), Positives = 196/399 (49%), Gaps = 5/399 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINVQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTE 358

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            L + ++  ++   HLR              +  E  K 
Sbjct: 359 RLNRLENALKLAHAHLRLSQFGAFVSKNNQAIELEALKR 397


>gi|167747002|ref|ZP_02419129.1| hypothetical protein ANACAC_01714 [Anaerostipes caccae DSM 14662]
 gi|167653962|gb|EDR98091.1| hypothetical protein ANACAC_01714 [Anaerostipes caccae DSM 14662]
          Length = 402

 Score =  276 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 14/374 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  +SV++++ ++K I +S+  L+ + ++GE+S  +  HSSGH YFSLKD+ S+I  +++
Sbjct: 2   NKVFSVAQINAYIKRIFQSDYALNRIYIKGEVSNCK-YHSSGHIYFSLKDDKSQISCVMF 60

Query: 70  KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
               ++ ++F  E G   +V G I+ F  +  YQ+    +   G G L    EK K+KL 
Sbjct: 61  ANQRISGLDFEMENGQTVIVSGSISVFERNGTYQLYANEISLDGIGRLYVEFEKLKEKLY 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF  + K PIP  PK I ++T+ TGA I DI+     R P ++++++P +VQGD   
Sbjct: 121 REGLFDHEKKKPIPQNPKTIGIVTAKTGAAIHDIMSVAKRRNPYIQLVLYPAQVQGDGAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I   I  L+           D II+ RGGGSIEDLW FN+E + RAI  +  PIIS  
Sbjct: 181 ETIVRGIETLDR-------YGVDTIIIGRGGGSIEDLWAFNEEKVARAIYAAKTPIISGT 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+ADYAADLRA TPT A E+AVP       ++   +  L+  I  +++     L
Sbjct: 234 GHEVDTTIADYAADLRAATPTAACELAVPDLRETLDAIDARKRSLSVQIRHILRNYELRL 293

Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 L   D  L     R+    L   L   ++ +  R          R+        
Sbjct: 294 EQYSGKLRRFDPKLQLQEQRMTLAELEDRLTKRMDYLRNRYQHRLELYAQRLHGLSPTAK 353

Query: 366 IQKNRQHILEKQQH 379
           +     ++ ++   
Sbjct: 354 LIGGYGYLSDQSGQ 367



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 49/141 (34%), Gaps = 2/141 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++    I  +++ +   ++  LR   L  ++    L   R   K ++      + +L  
Sbjct: 264 LRETLDAIDARKRSLSVQIRHILRNYELRLEQYSGKL--RRFDPKLQLQEQRMTLAELED 321

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   + +        + +  + L   +    L  GY  + D +   +     ++    +
Sbjct: 322 RLTKRMDYLRNRYQHRLELYAQRLHGLSPTAKLIGGYGYLSDQSGQPVLSTAQISEGDEV 381

Query: 486 LINFFDGQANAIVINKAPPKE 506
            I   DG     V    P ++
Sbjct: 382 QITISDGSIKTKVTQVIPREK 402


>gi|257459013|ref|ZP_05624132.1| exodeoxyribonuclease VII, large subunit [Campylobacter gracilis
           RM3268]
 gi|257443398|gb|EEV18522.1| exodeoxyribonuclease VII, large subunit [Campylobacter gracilis
           RM3268]
          Length = 388

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/303 (35%), Positives = 167/303 (55%), Gaps = 8/303 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E++ S V V GEIS +R   +SGH YF++KD  + ID  ++K    
Sbjct: 2   LSVSELNAQAKALLETSFSLVEVEGEISKFRIQSTSGHWYFTIKDASAAIDCAMFKFNAA 61

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +I F+P  G + +V GK++ +  +  YQI + ++  SG G L  A    K++L +EGLF 
Sbjct: 62  RINFIPAVGDKLIVSGKVSLYAPTGAYQIQVSNIRKSGEGELEAAFAALKERLSKEGLFD 121

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
             HK  +P   + IA+ITS   A   D+L+    RF L ++ ++   VQG+  P  I + 
Sbjct: 122 ASHKKQLPKFAQSIAIITSAGSAAQADMLRTAQDRFALCKIDLYNALVQGEGAPASIISV 181

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +           D I++ARGGGS EDLW FNDE + RAI  +  P+ISA+GHE D+
Sbjct: 182 LRAADA-------KGYDAIVIARGGGSREDLWCFNDEALARAIYATKTPVISAVGHEIDF 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           +++D+ AD R+ TPT A    +P    +  SL  +   L+ +I   I    N L+     
Sbjct: 235 SISDFVADHRSLTPTAAMIDLLPDICAIFQSLDGVSDALDRLIKDKISSAQNVLSLAALE 294

Query: 314 LPN 316
           L +
Sbjct: 295 LKS 297


>gi|254459098|ref|ZP_05072521.1| exodeoxyribonuclease VII, large subunit [Campylobacterales
           bacterium GD 1]
 gi|207084369|gb|EDZ61658.1| exodeoxyribonuclease VII, large subunit [Campylobacterales
           bacterium GD 1]
          Length = 395

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 123/368 (33%), Positives = 197/368 (53%), Gaps = 11/368 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +VS L+  ++ ++ES  S V V GE+S     H+SGH YF+LKD+ S + A+++KG  
Sbjct: 3   VLNVSSLNEQIQILLESTFSRVLVEGELSRITF-HNSGHIYFTLKDSTSTLKAVMFKGNA 61

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            K++F  +EG++ ++ G IT +    +YQI   S+ P+G GTL  A E+ K+KL  +G F
Sbjct: 62  TKLKFQLKEGLKVILDGAITLYKPRGEYQINCFSIEPAGHGTLALAYEQLKQKLASKGYF 121

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K  +P  P  IA+ITS TGA ++D+L+  + R+  L + I+ V VQGD     IAN
Sbjct: 122 EQSIKKQLPKFPSKIALITSATGAALQDMLRVANSRYRALEIDIYDVLVQGDSAASSIAN 181

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI+  +T          D I++ RGGGSIEDLW FN+E++  AI  +  PI+SA+GHE D
Sbjct: 182 AIIVSDTR-------EYDFIVIGRGGGSIEDLWAFNEEIVADAIFRAKTPIVSAVGHEID 234

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           W ++D+ +DLR PTP+ A +M +P    L  +L +L  +   I+ + I+     L  +  
Sbjct: 235 WLISDFVSDLRVPTPSAAMQMCLPDSNELYQTLDSLSVQYTQIVSQKIQSSKQELTHMYS 294

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                +  + L      +  L     H +   +        ++   I+S+      +K  
Sbjct: 295 LYSSHSIQRKLEQKMQEVKILKDSFFHAMSTKLNVAQSQVLNLQKMIESNHPKFKSKKGF 354

Query: 371 QHILEKQQ 378
             I +  +
Sbjct: 355 AQISQDSK 362



 Score = 50.5 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 54/164 (32%), Gaps = 7/164 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  +  ++ ++       +Q       E  Q ++ +  Q+ + +  + +     L 
Sbjct: 231 HEIDWLISDFVSDLRVPTPSAAMQMCLPDSNELYQTLDSLSVQYTQIVSQKIQSSKQELT 290

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +         + ++      +K L       +S K+    + V    ++++S   K   
Sbjct: 291 HMYSLYSSHSIQRKLEQKMQEVKILKDSFFHAMSTKLNVAQSQVLNLQKMIESNHPKFKS 350

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           K+G+  I   ++  I     L      L    +   +A VI K 
Sbjct: 351 KKGFAQI-SQDSKVI-DISTLNVGDDFLAQSAEVSISAKVIKKE 392


>gi|308182434|ref|YP_003926561.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori PeCan4]
 gi|308064619|gb|ADO06511.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori PeCan4]
          Length = 420

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLIIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCIQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I  +++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYVDSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWWQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSNEKARASATI 414


>gi|164688610|ref|ZP_02212638.1| hypothetical protein CLOBAR_02255 [Clostridium bartlettii DSM
           16795]
 gi|164603023|gb|EDQ96488.1| hypothetical protein CLOBAR_02255 [Clostridium bartlettii DSM
           16795]
          Length = 416

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 131/357 (36%), Positives = 206/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           VSE + ++K I+  +  L  + ++GEIS ++  HSSG+ Y SLKD +S+I+ +I++   +
Sbjct: 23  VSEANSYIKRILINDPILCSLKIKGEISNFKV-HSSGNVYLSLKDQNSKINCVIFRNDYD 81

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K     E G + +  G I+ +     YQ+ I+ +  +G G L     K K+KL +EGLF 
Sbjct: 82  K-SLNLENGTKIIANGYISVYEREGSYQLYIKHIEVAGIGNLYIEFNKLKEKLQKEGLFD 140

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            Q+K PIP IPK I V+TSPTGAVIRDI+     R+P + + ++PVKVQG    +EI   
Sbjct: 141 YQYKKPIPKIPKSIGVVTSPTGAVIRDIINVTKRRYPKVHIKLYPVKVQGQGSKEEICEG 200

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D II+ RGGGSIEDLW FN+E + R +  S IPIISA+GHE D+
Sbjct: 201 IRFFNEVHP------VDTIIVGRGGGSIEDLWSFNEEEVARCVFESKIPIISAVGHEIDF 254

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ AD+RAPTP+ AAE+A P  E L   L N++ R+N  +  +++Y    L    K 
Sbjct: 255 TICDFVADMRAPTPSAAAEIATPSLEDLHFKLDNIQTRMNKSLSNIVEYDEQKLKYTFKR 314

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +     D  ++     LD++  ++  N+E  I ++  +  ++ + + +   +  + +
Sbjct: 315 INTILNDYIINDKIIELDKITEKINLNIENKIEKESMNLRNLGSLLHNLSPLKTLDR 371



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 51/140 (36%), Gaps = 3/140 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           ++     +   Q  + + +   + Y   + K     ++ +       I      + K+  
Sbjct: 279 LEDLHFKLDNIQTRMNKSLSNIVEYDEQKLKYTFKRINTILND--YIINDKIIELDKITE 336

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           +I   + +KI+    ++     +L + +   TL RGY+ I + ++  +     ++    I
Sbjct: 337 KINLNIENKIEKESMNLRNLGSLLHNLSPLKTLDRGYSII-NKDDVVVNSVLKISENDEI 395

Query: 486 LINFFDGQANAIVINKAPPK 505
            +   DG  +  V      +
Sbjct: 396 EVILSDGSLDCTVNKINKKE 415


>gi|308061613|gb|ADO03501.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Cuz20]
          Length = 420

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYPFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378


>gi|110596939|ref|ZP_01385229.1| exodeoxyribonuclease VII, large subunit [Chlorobium ferrooxidans
           DSM 13031]
 gi|110341626|gb|EAT60086.1| exodeoxyribonuclease VII, large subunit [Chlorobium ferrooxidans
           DSM 13031]
          Length = 401

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 129/344 (37%), Positives = 193/344 (56%), Gaps = 6/344 (1%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SVSEL+  +K  +E     V V+GEIS Y+  HSSGH+Y +LKD+ ++I A+IW
Sbjct: 1   MSTEILSVSELTQQIKSELEMTFPAVKVKGEISNYK-RHSSGHSYLTLKDDGAQIPAVIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K T  ++     +GI  +  G++  +P S +YQ+I  ++  +G G L  A  +  +KL +
Sbjct: 60  KNTGIRLAVELRDGINVVAEGRLEVYPPSGRYQLICTAVTAAGEGALQQAFAELLQKLAK 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F+ + K PIP IP+ IA+ITS TGAVI D+ + +  RFP  RV+++PVKVQG +  +
Sbjct: 120 AGYFAAERKKPIPAIPETIALITSSTGAVIEDMSKVLERRFPAARVLLYPVKVQGTDAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +A  I   N         RPD+II+ARGGGS+EDL  FN E++  A+ +SSIP+ISAIG
Sbjct: 180 SVAAGIAWFNE--TKNPAHRPDVIIIARGGGSLEDLQAFNGEVVANALYHSSIPVISAIG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306
           HETD T+AD  ADLRA TP+ AAE+AVP    L   +  L+++ +  +   ++   +   
Sbjct: 238 HETDLTIADMTADLRAGTPSIAAELAVPDTGELLRRIETLQSKQDRAVQNKVEGAERQIY 297

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                 A       +     R+  L       +      K   +
Sbjct: 298 SICSSYAFNRPPLQMEQFEERITTLLDRTTTTIRNRYSEKAERY 341



 Score = 66.7 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 6/177 (3%)

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L       +  I          +   +++       +       E  + IE +  +  R 
Sbjct: 225 LYHSSIPVISAIGHETDLTIADMTADLRAGTPSIAAELAVPDTGELLRRIETLQSKQDRA 284

Query: 391 IF-----LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
           +       E++           +   ++      I  L+ R    + ++        +  
Sbjct: 285 VQNKVEGAERQIYSICSSYAFNRPPLQMEQFEERITTLLDRTTTTIRNRYSEKAERYASL 344

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + L    Y+ TL+RGY  ++     F+T    L    R+ + F +G   A++ +  
Sbjct: 345 LQQLALLDYRKTLQRGYALVR-KEGKFMTGIAELHPDDRVDLLFHEGTVPAVISSDQ 400


>gi|317179346|dbj|BAJ57134.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F30]
          Length = 420

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           ++   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378


>gi|42526527|ref|NP_971625.1| exodeoxyribonuclease VII, large subunit [Treponema denticola ATCC
           35405]
 gi|41816720|gb|AAS11506.1| exodeoxyribonuclease VII, large subunit [Treponema denticola ATCC
           35405]
          Length = 398

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 127/366 (34%), Positives = 193/366 (52%), Gaps = 10/366 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           YSV E++  +K ++ES   +V + GEIS +R   + GH YF LKD  + I A+++KG   
Sbjct: 5   YSVYEITLQIKELLESGFGYVSIEGEISNFRPSAA-GHLYFILKDEKASIQAVMFKGKTR 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F+P++G+     G I+ +     YQIIIE +  +G G +L  LE+RKKKL  EG+F 
Sbjct: 64  SLSFVPKDGMTVKAEGAISVYEQRGSYQIIIEEMSLAGEGNILKMLEERKKKLAAEGIFD 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
            + K P+P+ PK IAVITSPTGA +RDI+  +  R   + +++ P  VQG+E    +   
Sbjct: 124 SERKKPLPYFPKRIAVITSPTGAAVRDIINVVKRRNEKIGIVVLPAIVQGEEAAPVLIR- 182

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
                 LK        D+II+ RGGGS+EDL  F+DE +VRAIA    P+ISA+GHE DW
Sbjct: 183 -----QLKIADEKNLGDLIIIGRGGGSLEDLLPFSDEELVRAIAACKTPVISAVGHEIDW 237

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLK 312
            L+D+AAD+RAPTP+ AAE+A P+   +  S+      L   I   I+       N    
Sbjct: 238 ALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIERIRLMLNNFKPD 297

Query: 313 ALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +L    + +      R D    E+   ++       +    +   ++       + +   
Sbjct: 298 SLELRFRNIQQPLLARFDNAKEEILSGMQERCKDLRQRLLVLNKILEGANPQGILDRGYS 357

Query: 372 HILEKQ 377
            +   Q
Sbjct: 358 IVRNAQ 363



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 7/172 (4%)

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
            E++  L                 + +  L   +     +  +  Q+IE  ++   R   
Sbjct: 233 HEIDWALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIE---RIRL 289

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +    K   L +     +  +             I   +  + K     + +  +IL+  
Sbjct: 290 MLNNFKPDSLELRFRNIQQPLLA---RFDNAKEEILSGMQERCKDLRQRLLVLNKILEGA 346

Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
             +  L RGY+ +++      I     +     +LI    G   A V   + 
Sbjct: 347 NPQGILDRGYSIVRNAQTGKTIRSFSQVKEGEALLIQPSKGTIEAEVKRVSS 398


>gi|325970930|ref|YP_004247121.1| exodeoxyribonuclease 7 large subunit [Spirochaeta sp. Buddy]
 gi|324026168|gb|ADY12927.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta sp. Buddy]
          Length = 398

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 124/371 (33%), Positives = 189/371 (50%), Gaps = 12/371 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSS-GHAYFSLKDNHSRIDAIIWKGT 72
           E SVS+L+  +K  +E     + V GEIS +    SS GH +F+LKD    I A+++KG+
Sbjct: 8   ELSVSDLTSLIKQTLEQGFYGLKVTGEISNF--RPSSTGHWFFTLKDETCSISAVMFKGS 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K++F P+EG +  V G +  +     YQ+  ES+  SG G LL  LE RK++    G 
Sbjct: 66  TWKVDFTPQEGDKVTVTGSLDVYGARGTYQLKCESMEKSGFGQLLAMLEMRKRQYAALGY 125

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F ++ K PIP  P  + V+TSPTGA ++DIL  +  R P L +++ P  VQG+     IA
Sbjct: 126 FDEKTKKPIPKRPLRVGVVTSPTGAALQDILNILGRRAPSLDILVLPATVQGESAAPSIA 185

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           N ILQ N L         D++I+ RGGGSIEDL  F++E ++ AI  S IPIISA+GHE 
Sbjct: 186 NRILQANDL------LLCDVLIVGRGGGSIEDLLPFSEECVIEAIHCSQIPIISAVGHEI 239

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNS 309
           DW L+D+ ADLRAPTP+ AAE+        ++ + NL  +L   +     +         
Sbjct: 240 DWALSDFVADLRAPTPSAAAELVSQGYMDYRNQVQNLYEQLQKSMQSRLLLAESKVKRFD 299

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                      +S   Y L      L    + ++          I  +++   +  + + 
Sbjct: 300 TKAMQVRISNIISTKEYLLANAGNNLVIAQKQLLKSHDARVELAIRELQALSPLAILARG 359

Query: 370 RQHILEKQQHI 380
              +  ++  +
Sbjct: 360 YTVVQNQEGKL 370



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 5/177 (2%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--- 385
           + +       +  +        +  +  +++       +   Q  ++ +  ++ + +   
Sbjct: 222 EAIHCSQIPIISAVGHEIDWALSDFVADLRAPTPSAAAELVSQGYMDYRNQVQNLYEQLQ 281

Query: 386 --QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                R +  E K K      ++ +  N I      +      +       +KS    V 
Sbjct: 282 KSMQSRLLLAESKVKRFDTKAMQVRISNIISTKEYLLANAGNNLVIAQKQLLKSHDARVE 341

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           +  R LQ+ +    L RGYT +Q+     +  K      + + + F DG+  A+V  
Sbjct: 342 LAIRELQALSPLAILARGYTVVQNQEGKLVASKEQAEPGSMLTLTFADGKRKALVKE 398


>gi|194337424|ref|YP_002019218.1| exodeoxyribonuclease VII, large subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309901|gb|ACF44601.1| exodeoxyribonuclease VII, large subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 402

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 132/362 (36%), Positives = 218/362 (60%), Gaps = 6/362 (1%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SVSEL+  +K  +E++   V ++GEIS  +  H SGH Y +LKD  ++I A++W
Sbjct: 1   MSAEILSVSELTQQIKTRLETHFPQVRLKGEISNCK-RHGSGHIYLTLKDEGAQIPAVVW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K T +++    ++G++ +  G++  +P S +YQ+I  S+  +G G L  A  +  +KL +
Sbjct: 60  KTTASRMAVALKDGMDVIAEGRLEVYPPSGRYQLICTSVTEAGQGALQQAFAELLQKLAK 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F+ + K  IP IP+II +ITS TGAVI D+ +    RFP  +++++PVKVQG+   +
Sbjct: 120 AGYFNAERKRAIPAIPEIIGLITSSTGAVIEDMSKVFERRFPAAQLLLYPVKVQGNSAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+A AI   N+ K+     RPDIII+ARGGGS+EDL  FN E++  A+ NS IP+ISAIG
Sbjct: 180 EVAAAIAWFNSTKKRA--HRPDIIIIARGGGSLEDLQAFNGEIVANALYNSKIPVISAIG 237

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD  ADLRA TP+ AAE+AVP ++ L   + NL++R + ++   ++     L+
Sbjct: 238 HETDLTIADMVADLRAGTPSIAAELAVPDRQELLRHISNLQSRQDRLLQAKLEGTERQLS 297

Query: 309 SLLKALPNSDQTLS--CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           S+  +   +   L       RLD L  ++   +  +  ++ +H+  +  ++ +      +
Sbjct: 298 SICSSYAFNRPPLQMLQFHERLDSLVSQMSRAITNLFSQRVQHYAAVKQQLNTLDYRKTL 357

Query: 367 QK 368
           ++
Sbjct: 358 ER 359



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427
           RQ +L    +++    + L+      + +++ +       +   ++   H  +  L++++
Sbjct: 267 RQELLRHISNLQSRQDRLLQAKLEGTERQLSSICSSYAFNRPPLQMLQFHERLDSLVSQM 326

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +++         +   + L +  Y+ TL+RGY  ++     F+T  + L     + +
Sbjct: 327 SRAITNLFSQRVQHYAAVKQQLNTLDYRKTLERGYVLVK-KEGKFMTGSQKLKASDNVEL 385

Query: 488 NFFDGQANAIVI 499
            F DG   A++ 
Sbjct: 386 LFHDGMLPAVIS 397


>gi|312127938|ref|YP_003992812.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777957|gb|ADQ07443.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 454

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ ++GE+   +   S  H YF LKD    +
Sbjct: 4   SNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +    +      + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA IRDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L+D+ AD+RA TPT A EM V  ++     L   + R+ + + +   
Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLSEYQKRMKSAMEKTFN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                +  L   L       T++     +D    +L   +   +   +R+  +   R+  
Sbjct: 293 TVKEKVGILQYKLYQNSPANTVAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + + +  K+  +      K  +                    
Sbjct: 353 LNPESRLLVARTNFDNCSRRLGEAFKKIFQQKEFAYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTISQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
           +    I+    DG   + V
Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443


>gi|261837705|gb|ACX97471.1| large subunit of the single-stranded DNA-specific
           dexodeoxyribonuclease VII [Helicobacter pylori 51]
          Length = 420

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 121/419 (28%), Positives = 199/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKMSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +  +  L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNALENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSDEKARASATI 414


>gi|208434205|ref|YP_002265871.1| exonuclease VII, large subunit [Helicobacter pylori G27]
 gi|226736764|sp|B5ZA25|EX7L_HELPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|208432134|gb|ACI27005.1| exonuclease VII, large subunit [Helicobacter pylori G27]
          Length = 420

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINVQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L      L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLCRSFKTLLHQKKVHLEHLAA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L   LE       R    ++ +I    L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLTIALENKTLEFLRLKKTLLEKISIQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378


>gi|15611313|ref|NP_222964.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori J99]
 gi|14194743|sp|Q9ZMH7|EX7L_HELPJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|4154774|gb|AAD05833.1| EXODEOXYRIBONUCLEASE LARGE SUBUNIT [Helicobacter pylori J99]
          Length = 420

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 120/409 (29%), Positives = 198/409 (48%), Gaps = 5/409 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEMVVFGGISVYAPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPNFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFY--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDSVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300

Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           +L     +     +  +L++L   L++     +  K      I  ++ +   +    +  
Sbjct: 301 SLKRLSFENKHHLNALKLEKLTIALDNKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERL 360

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             +    +     +K       + K  +   L  L+   K  +      
Sbjct: 361 NRLENALKLAYANLKLPQFGALVSKNHQAIELEALKRGDKIELSNEKAR 409


>gi|210134457|ref|YP_002300896.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori P12]
 gi|226736763|sp|B6JKI8|EX7L_HELP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|210132425|gb|ACJ07416.1| exonuclease VII large subunit [Helicobacter pylori P12]
          Length = 420

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            + +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++L    T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSLH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQKLDGFNVKLHRSFKILLHQKKAYLEHLAD 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +       +    + +         +     R    +
Sbjct: 357 -TERLNALENALKLAHANLKLPQFGAFLSKNNQAIELEALKRGDKIELSNEKARASAEI 414


>gi|308063121|gb|ADO05008.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Sat464]
          Length = 420

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              +K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKVHLEHLEA 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +L           +       +L+  LE       R    ++ +I +  L     + +  
Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395
             E+   +E  +K     + L +
Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378


>gi|225388183|ref|ZP_03757907.1| hypothetical protein CLOSTASPAR_01918 [Clostridium asparagiforme
           DSM 15981]
 gi|225045741|gb|EEG55987.1| hypothetical protein CLOSTASPAR_01918 [Clostridium asparagiforme
           DSM 15981]
          Length = 398

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/353 (33%), Positives = 187/353 (52%), Gaps = 13/353 (3%)

Query: 21  SYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78
           + ++K++   +   + + V+GE+S  +  H SGH YF+LKD  S+I A+++      + F
Sbjct: 1   NSYIKNMFTQDFALNKISVKGEVSNCK-YHPSGHIYFTLKDGGSQIGAVMFASQRKNLGF 59

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138
             EEG + +  G +  +    KYQ+   S+   G+G L    E+ + +L E G+F   +K
Sbjct: 60  RMEEGQQVVAEGTVDVYERDGKYQLYARSVTLDGTGDLFRRFEQLRNELEEMGMFDGCYK 119

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQL 197
            PIP   K + V+T+ TGA IRDI+   + R P +++I++P  VQG      I   I  L
Sbjct: 120 QPIPRYAKRVGVVTASTGAAIRDIMNISARRNPYVQLILYPALVQGAGAKYSIVKGIQTL 179

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
           + +         D+II+ RGGGSIEDLW FN+EM+ RAI     P+ISA+GHETD T+AD
Sbjct: 180 DRM-------NLDVIIVGRGGGSIEDLWAFNEEMVARAIFECGTPVISAVGHETDVTIAD 232

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-- 315
           Y AD+RAPTP+ AAE+AV      ++        LN  + R ++     LN  +  L   
Sbjct: 233 YVADMRAPTPSAAAELAVFDYSQFEAQTDLYRRTLNRGMERRLERVRYRLNQDVLRLKMH 292

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + ++ L+  R RL  L   +   +E  +         +  R++S   +  I +
Sbjct: 293 HPERQLNEKRQRLADLEDRMGRIMERRVTAGRHRLALLAGRLQSLSPLEQISR 345



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
                     R   +  +    +L +     + ++      +  L  R+  I+  ++ + 
Sbjct: 264 RRTLNRGMERRLERVRYRLNQDVLRLKMHHPERQLNEKRQRLADLEDRMGRIMERRVTAG 323

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
              +++    LQS +    + RGY  I D     +     +    RI +   DG+A A V
Sbjct: 324 RHRLALLAGRLQSLSPLEQISRGYGFITDGGGKRLESVSQVKPGDRITVRVRDGRAVARV 383

Query: 499 INKAPPKEQPT 509
                  ++  
Sbjct: 384 EETESLDDRKG 394


>gi|154502457|ref|ZP_02039517.1| hypothetical protein RUMGNA_00270 [Ruminococcus gnavus ATCC 29149]
 gi|153796853|gb|EDN79273.1| hypothetical protein RUMGNA_00270 [Ruminococcus gnavus ATCC 29149]
          Length = 405

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 119/371 (32%), Positives = 208/371 (56%), Gaps = 13/371 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V +++ ++K++   +   + + V+GE+S  +  H SGH YFSLKD    I  +++ G
Sbjct: 5   IYTVKQVNAYIKNMFTQDFMLNRLYVKGEVSNCK-YHPSGHIYFSLKDESGTIACVMFAG 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           + + + F  +EG + +V+G ++ +    +YQ+    +I  G+G L    E  KK+L E G
Sbjct: 64  SRSGLSFRMQEGQQVVVLGSVSVYERDGRYQMYAREIILDGAGELYLKFEALKKELEEMG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+ ++K PIP   K + ++T+ +GA +RDI+   + R P +++I+ P KVQG+   + I
Sbjct: 124 MFAQEYKRPIPQFVKKVGIVTASSGAAVRDIINIAARRNPYVQLILCPAKVQGEGAAESI 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  L            D++I+ RGGGSIEDLW FN+E++ RAI  S +P+ISA+GHE
Sbjct: 184 VQGIRML-------EEQDVDVMIVGRGGGSIEDLWAFNEEIVARAIFESRVPVISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD T+ADY ADLRAPTP+ AAE+AV   +  ++ +   + RL++ +++  +     L   
Sbjct: 237 TDTTIADYVADLRAPTPSAAAELAVYEYQAAENLMKEYQMRLSSAVLKKAEQNRQYLKQA 296

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  Q L  +R     L  +L   +E I+ +K   F   + ++K    +  + +
Sbjct: 297 ALKLRLFHPRQKLLENRQYASDLELQLRSRMEEILQQKRHQFALYVEKMKGLSPLEKLNQ 356

Query: 369 NRQHILEKQQH 379
              +I +++  
Sbjct: 357 GYAYIEDEKGR 367



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 2/134 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           Q     + E Q  +   V +         K+  A L +     + ++     +   L  +
Sbjct: 265 QAAENLMKEYQMRLSSAVLKKAEQNRQYLKQ--AALKLRLFHPRQKLLENRQYASDLELQ 322

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +   ++      ++    ++  +    L +GY  I+D     + Q   +     I 
Sbjct: 323 LRSRMEEILQQKRHQFALYVEKMKGLSPLEKLNQGYAYIEDEKGRPVRQIAEVKEGDAIR 382

Query: 487 INFFDGQANAIVIN 500
           I   DG   A V  
Sbjct: 383 IYVSDGMIEAQVKG 396


>gi|169333803|ref|ZP_02860996.1| hypothetical protein ANASTE_00189 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259368|gb|EDS73334.1| hypothetical protein ANASTE_00189 [Anaerofustis stercorihominis DSM
           17244]
          Length = 401

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 204/364 (56%), Gaps = 12/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +D+   +V +++ ++K +++ +  LS++ V GE+S Y+  HSSGH YFS+KDN  +I+ +
Sbjct: 2   IDNVILTVRDVNKYIKTLLDYDELLSNLRVEGEVSNYK-RHSSGHLYFSIKDNSGKINCV 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K     + F P +G++ ++ G ++ F  +  YQ+ ++S+   G G L     +  ++L
Sbjct: 61  MFKSDTYSLAFEPMDGMKVIIEGYVSVFERNGNYQLYVKSMKKKGIGRLYEEYNRLLEEL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
             +G F    K  IP     +AV+TSPTGA +RDI+  I  R   +++I+ PV VQG+  
Sbjct: 121 KAQGYFDQDKKKSIPSFVDTVAVVTSPTGAAVRDIISVIKRRNKNIKIIVCPVTVQGEGS 180

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            +E+A  I  +N L         D+II  RGGGSIE+LW FN+ ++ +A+ +S+IP++SA
Sbjct: 181 GEEVAQMIYDINRL------KLADVIITGRGGGSIEELWAFNERVVAQAVFDSAIPVVSA 234

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ AD RAPTP+ A E+     +++  ++   E ++NN +  LI      
Sbjct: 235 VGHETDFTICDFVADFRAPTPSVAGEVVSEPLDNIVYTVDVYEKKINNSLKGLIDKYTEK 294

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN+++    +   +  +      +D L   ++ +L   I       +     I S   + 
Sbjct: 295 LNNIINKPVMKRPNAYIENMEQYIDTLKDNIDLSLYNKINLLKHKVDSSEKLIHSLSAVS 354

Query: 365 NIQK 368
            +++
Sbjct: 355 VLER 358



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           +    I  +  +I  L   I+  L +KI      V  + +++ S +  + L+RG+  ++ 
Sbjct: 306 RPNAYIENMEQYIDTLKDNIDLSLYNKINLLKHKVDSSEKLIHSLSAVSVLERGFAIVE- 364

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +NN  IT   ++  K  I I   DG+ N+++    
Sbjct: 365 SNNKVITSVNDVNVKDEISIRMKDGKLNSVISEIE 399


>gi|257457306|ref|ZP_05622477.1| exodeoxyribonuclease VII, large subunit [Treponema vincentii ATCC
           35580]
 gi|257445228|gb|EEV20300.1| exodeoxyribonuclease VII, large subunit [Treponema vincentii ATCC
           35580]
          Length = 395

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 128/367 (34%), Positives = 206/367 (56%), Gaps = 10/367 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            YS+ E++  +K + E N + + + GEIS  R   S+GH YF+LKD  + + A+++KG  
Sbjct: 4   VYSIQEITGIIKSLFEQNFTSLRIAGEISNCR-PSSTGHLYFTLKDEKAALQAVMFKGRT 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             + F P++G++ +V G ++ +     YQ+I+E++  +G G +L  LE+RK+KL  EGLF
Sbjct: 63  WTLGFEPKDGLKVIVSGSLSVYEQRGSYQVIVETMELAGEGAILKMLEERKQKLAREGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K P+PF P  IAVITSPTGA +RDIL  +S R   + V + P  VQG E    +A 
Sbjct: 123 DQARKRPLPFFPLRIAVITSPTGAALRDILTVLSRRNSTVSVTVLPAPVQGAEAAPVLAR 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +   N           ++II+ RGGGS+EDL  F+DE +VRA+A S IP+ISA+GHE D
Sbjct: 183 QLETANR------YKLGELIIIGRGGGSLEDLLPFSDEAVVRAVAASEIPVISAVGHEID 236

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311
           W L D+AAD+RAPTP+ AAE+AVPV + +  ++  L+  +   I  +++    T+     
Sbjct: 237 WALTDFAADVRAPTPSAAAELAVPVLDDITGTITQLQDDMLRSIGGILERIRLTIKGFTP 296

Query: 312 KALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           ++L    + +      RLD     L ++++  +         +   I+       + +  
Sbjct: 297 ESLEMKFRRIEQPLLMRLDDAKENLLYSMQARLTDTKHRLALLTRTIEGANPQEILNRGY 356

Query: 371 QHILEKQ 377
             + ++Q
Sbjct: 357 SIVYDRQ 363



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 6/159 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE-KIAIL 402
                        +++       +     + +    I Q+    LR I    +  ++ I 
Sbjct: 233 HEIDWALTDFAADVRAPTPSAAAELAVPVLDDITGTITQLQDDMLRSIGGILERIRLTIK 292

Query: 403 HMLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
               E  + +   +       +      + + +  ++      +++ TR ++    +  L
Sbjct: 293 GFTPESLEMKFRRIEQPLLMRLDDAKENLLYSMQARLTDTKHRLALLTRTIEGANPQEIL 352

Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANA 496
            RGY+ + D      + + ++ A   R+ I   DG+  A
Sbjct: 353 NRGYSIVYDRQTGLVLRRTQDAAAAGRLRIKLADGEIAA 391


>gi|319937359|ref|ZP_08011766.1| exodeoxyribonuclease 7 large subunit [Coprobacillus sp. 29_1]
 gi|319807725|gb|EFW04318.1| exodeoxyribonuclease 7 large subunit [Coprobacillus sp. 29_1]
          Length = 416

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 211/396 (53%), Gaps = 14/396 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++    SV  L+ ++K  +  +  L +V ++GEIS YR    SGH YF+LKD +SR+ AI
Sbjct: 1   MERQYISVFALNKYIKAKMNQDVSLQNVYIKGEISNYRPHP-SGHLYFTLKDENSRVSAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++     K+ F  E G++  +   ++ +  S +YQ+ ++++   G G L    E  K+KL
Sbjct: 60  MFASAARKMSFQIENGMQVFIHASVSVYEASGQYQLYVQTIQQDGIGNLYLQYEALKRKL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            +EGLF  ++K  I   PK IAV+++  GA ++DI++ I  RFP  +VI+FP+ VQG   
Sbjct: 120 EKEGLFDLKYKQSIRSFPKGIAVLSAKQGAAVQDIVRTIHLRFPFAKVIVFPIPVQGKNA 179

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             +I   + Q++TL         D IILARGGGSIEDLW+FN+E + R +     PII+ 
Sbjct: 180 YLQIIETLKQVDTL-------GFDTIILARGGGSIEDLWNFNEEDLARCVFACQTPIITG 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHETD+T+ D+ +D R+ TPT AA  A P ++ L+    NL+ +L   +   +  +   
Sbjct: 233 IGHETDFTICDFVSDYRSATPTAAAVKATPDQKELRVYQENLQRQLLYKMKHRLDVQRQY 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLI 363
           L+ L +   L N +   S    RL +L  +L +  ++   R Y+        +K+   L 
Sbjct: 293 LSRLQQSYYLNNPEVIYSHEFLRLTKLQDKLSYQFKVFDMRVYQQLASYQTELKNQIDLK 352

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
               +++ H           +K   R   L +KEK 
Sbjct: 353 LQAYEHQLHQHITTLDALSPLKVLQRGYTLIQKEKT 388


>gi|317008909|gb|ADU79489.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori India7]
          Length = 420

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 123/419 (29%), Positives = 198/419 (47%), Gaps = 8/419 (1%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
              HK P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKAHKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           +I   ++     T    D +++ARGGGS+EDL+ FNDE IV A+  +    +SAIGHE+D
Sbjct: 183 SIAYADSFH--NTKNAFDAVVVARGGGSMEDLYSFNDEKIVEALYWAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D AADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLAADLRASTPSNAMEILLPNSDEWLQRLDGFHLKLHRSFKILLHQKKAHLEHLAD 300

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L           +       +L+  LE       R    ++ +I +  L       +  
Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLLAK-- 356

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             E+   +E  +K     + L +   +   +    + +         +     R    +
Sbjct: 357 -TERLNALENALKLAHANLKLPQFGALVSKNNQAIELEALKRGDKIELNNEKARASAEI 414


>gi|219847837|ref|YP_002462270.1| exodeoxyribonuclease VII large subunit [Chloroflexus aggregans DSM
           9485]
 gi|219542096|gb|ACL23834.1| exodeoxyribonuclease VII, large subunit [Chloroflexus aggregans DSM
           9485]
          Length = 397

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/360 (31%), Positives = 188/360 (52%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VS+L+  L+  +E       + +  E+  +R    SGH YF+LKD  + I A++W+G
Sbjct: 3   VLTVSDLNSALRAHLEGEGLFFDLWLLAEVVEFRRYP-SGHCYFTLKDEQASIRAVLWRG 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              +I  LP  G   LV G++  +    + Q +++ ++P+G G L   L + + +L  EG
Sbjct: 62  VAERIATLPTNGDAVLVHGRVGFYEARGELQFVVDQIVPAGVGLLNAQLAQLRARLEAEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           LF ++ K P+P +P+ I ++TS   A ++D+L  +  R+PL  V++ P  VQG+  P  I
Sbjct: 122 LFDERRKRPLPPLPRRIGIVTSLQAAALQDMLTILRRRYPLAEVLLSPCLVQGELAPASI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+ ++ T          D++ILARGGG+ EDL  FNDE +VR +A S +PII+ +GHE
Sbjct: 182 VAALRRVYT-------EAVDLVILARGGGASEDLAAFNDEQVVRTVAASPVPIITGVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D  ADLRAPTP+ AAEMA P    L+  ++ L  R    II  +  +   +   
Sbjct: 235 TDTTLVDAVADLRAPTPSAAAEMAAPPLTELRQRVLALHERATVAIIDRLHRQRQMVAQQ 294

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +  +T+  +R  +D L R         +  +      +  R+ +      + +
Sbjct: 295 HALLQRNHPHRTIEAARQTVDDLSRRAGRAFGRWLQLEQTRLQGLQARLATLSPQATLAR 354



 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 2/133 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + RQ +L   +     +   L        ++ A+L   R      I      +  L  
Sbjct: 262 LTELRQRVLALHERATVAIIDRLHRQRQMVAQQHALLQ--RNHPHRTIEAARQTVDDLSR 319

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R        ++   T +      L + + + TL RGY   Q  + + +T    +     +
Sbjct: 320 RAGRAFGRWLQLEQTRLQGLQARLATLSPQATLARGYAIAQQVDGHVVTDPAQVQAGEAL 379

Query: 486 LINFFDGQANAIV 498
            +    G+   IV
Sbjct: 380 TLTVRAGRVRVIV 392


>gi|312877546|ref|ZP_07737506.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795687|gb|EFR12056.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 454

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 125/499 (25%), Positives = 208/499 (41%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N L   E+SV EL+ +LK  VE +  L  + ++GE+   +   S  H YF LKD    +
Sbjct: 4   NNILSKKEWSVYELTSYLKKKVEMDVLLKSIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +    +      + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  ++K  IP  PK + ++TS  GA +RDIL  I  RF  ++V I+   V
Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAVRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGG+ EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V  +      L   + R+ + + +++ 
Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVSFQNQALEKLNEYQKRMKSAMEKILN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                +  L   L       T++     +     +L   +   +   +R+  +   R+  
Sbjct: 293 MVKEKVGILQYKLYQNSPANTIAKRAQDISLYSHKLSFAINKKLHESHRNLKNFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + + +  K+  +      K  +                    
Sbjct: 353 RNPESRLSVARTNFDNCSRRLGEAFKKIFQQKEFAYKVNL-------------------- 392

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                        L +    N LKRGY+     N+  +T    +
Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTISQV 424

Query: 480 ATKTRILINFFDGQANAIV 498
                I+    DG   + V
Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443


>gi|313114143|ref|ZP_07799695.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623552|gb|EFQ06955.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 404

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 11/358 (3%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS L+ ++K +++    L  + +RGEI+ +     SGH YFSL+D+   + A++++   
Sbjct: 3   TVSALNRYVKTLLDANDTLFDLALRGEIANFVQNARSGHCYFSLRDDVCSVKAVMFRTDA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PEEG+  +V  + T +     +Q+ +  + P G G    ALE+ K KL +EGLF
Sbjct: 63  RRLAFRPEEGMRVVVRCRATLYERDGTFQLYVNDMFPDGIGAAQLALEQLKAKLEQEGLF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
           + +HK P+P  PK I V+TS TGA ++DI   ++ R+P +R+++ PV VQG E  +++A+
Sbjct: 123 APEHKKPLPEFPKCIGVVTSKTGAALQDIRNVLTRRWPSVRLLLCPVTVQGFEAAQQVAD 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI +L+  KE       D II+ARGGGS EDLW FN EMI RA      P+ISAIGHE D
Sbjct: 183 AIKKLDQRKE------VDEIIVARGGGSREDLWVFNAEMIARAAYRCKKPLISAIGHEID 236

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ AD RAPTP+ AAE+AVP +   +  L++L+  +   + +      N L     
Sbjct: 237 YTILDFVADCRAPTPSAAAELAVPDRAEQERILLDLQQNIRKNMQKRFDLCYNGLEQYNF 296

Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L    + +    S+ +L ++   +   ++  +        H      S      + +
Sbjct: 297 VLEQGLARRNWQKSQGQLQQVQDAIRQQMQKRLHSAELQLGHAAALTGSLDPYKVLAR 354



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 3/136 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  + +L+ QQ+I + +++     +   ++   +L     +           ++++   
Sbjct: 263 AEQERILLDLQQNIRKNMQKRFDLCYNGLEQYNFVLEQGLAR--RNWQKSQGQLQQVQDA 320

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           I   +  ++ S    +     +  S      L RGYT +   N   +    +L  +  I 
Sbjct: 321 IRQQMQKRLHSAELQLGHAAALTGSLDPYKVLARGYTMVTAANGTIL-NADDLQPEKTIY 379

Query: 487 INFFDGQANAIVINKA 502
           +     +A   V    
Sbjct: 380 VRSASRRAKCRVEAVE 395


>gi|207108441|ref|ZP_03242603.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 339

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/304 (35%), Positives = 166/304 (54%), Gaps = 3/304 (0%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       S HAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSSHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
             ++K P P  PK +AVITS   A   D+ +  S R+P+  ++     +QG+ C + +  
Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D
Sbjct: 183 GIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           + L+D  ADLRA TP+ A E+ +P  +     L     +L+     L+  K   L  L  
Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAA 300

Query: 313 ALPN 316
           +L  
Sbjct: 301 SLKR 304


>gi|88607196|ref|YP_505831.1| exodeoxyribonuclease VII, large subunit [Anaplasma phagocytophilum
           HZ]
 gi|123494204|sp|Q2GIH0|EX7L_ANAPZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|88598259|gb|ABD43729.1| exodeoxyribonuclease VII, large subunit [Anaplasma phagocytophilum
           HZ]
          Length = 398

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 141/356 (39%), Positives = 208/356 (58%), Gaps = 10/356 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           S D PE++V+E++  L+  ++     + VRGEISG     +SGH YF+LKD++S I+A+ 
Sbjct: 10  SNDIPEFTVTEITGVLQRFMQETFYSIKVRGEISGL-SRPNSGHVYFTLKDSNSVINAVC 68

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W GT  +++    +G+E +  G ++ +   SKYQ+I+  +  +G G L   L + KKKL 
Sbjct: 69  WNGT--RLKVQFCDGLEVVCTGYLSVY--QSKYQLIVTDMTLAGYGKLAAMLAELKKKLE 124

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
            EGLFS   K  +PF+P  I VITSPTGAVI DI+ R+  RFP  V+++PV+VQGD    
Sbjct: 125 LEGLFSPARKKKLPFLPTKIGVITSPTGAVISDIISRVKQRFPSNVVVWPVQVQGDRASA 184

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +  AI   N+  +      P +II+ARGGGS EDLW FNDE + R +A S IPI+SAIG
Sbjct: 185 MVIEAIKGFNSFAD-----PPHVIIVARGGGSFEDLWPFNDEELARTVAASKIPIVSAIG 239

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+T+ DYAADLRA TPT A E+ +P K  L +S+     R      R++K +   L 
Sbjct: 240 HETDFTIIDYAADLRASTPTAAVELVLPEKSKLVASINEKFVRTKISFERIVKMQEYRLL 299

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
            L   L     +L           +++ + L++ + RK ++   ++ R+      H
Sbjct: 300 RLHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLESLMQRLSYYDSKH 355



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%)

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
           K     I   ++ ++  LH +  + KN +        +   +I ++L   +      +  
Sbjct: 284 KISFERIVKMQEYRLLRLHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLES 343

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             + L  +  K+ L  GY  ++D +   I+    L+T   I I   DG+  AI+I
Sbjct: 344 LMQRLSYYDSKHILSVGYAIVRDEHEKQISSVEALSTNDTITIELKDGKRRAIII 398


>gi|207725157|ref|YP_002255554.1| hypothetical exodeoxyribonuclease vII large subunit (partial
           sequence n terminus) protein [Ralstonia solanacearum
           MolK2]
 gi|206590390|emb|CAQ37351.1| hypothetical exodeoxyribonuclease vII large subunit (partial
           sequence n terminus) protein [Ralstonia solanacearum
           MolK2]
          Length = 360

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 8/311 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +  ++E + +   VRGEIS +     SGH YFSLKD  ++I  +++KG  
Sbjct: 41  VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 99

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
              +F P EG    V   +T +    + Q+ +E++  +G G L  A  + K  L  +GLF
Sbjct: 100 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 159

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K P+P  P  I V+TS   A +RD+L  +  R   + V+++PV VQG    + IA 
Sbjct: 160 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 219

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
            +  +N   E       D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD
Sbjct: 220 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 273

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+ D+ AD+RAPTPTGAAE+  P +  +   +      L+  + R +            
Sbjct: 274 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLGPPRPDGRMAGP 333

Query: 313 ALPNSDQTLSC 323
                    + 
Sbjct: 334 PPAQPASAHAR 344


>gi|300173627|ref|YP_003772793.1| exodeoxyribonuclease VII large subunit [Leuconostoc gasicomitatum
           LMG 18811]
 gi|299888006|emb|CBL91974.1| Exodeoxyribonuclease VII, large subunit [Leuconostoc gasicomitatum
           LMG 18811]
          Length = 428

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 149/502 (29%), Positives = 235/502 (46%), Gaps = 88/502 (17%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64
           S      ++S L+ +LK   +++  L  V + GEIS   G     H YFS+KD +  + I
Sbjct: 2   SETRKYLTISALTSYLKRKFDADPYLEKVYLTGEISNM-GRRRGRHLYFSMKDPNGGAVI 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            A ++    N+++F PEEG++   IG++  +  S  Y II+E + P G G L  A E+ K
Sbjct: 61  SAAMF-SYANRLKFEPEEGMKINAIGRVQIYEPSGTYSIILEQMTPDGIGELFLAYEQLK 119

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            KL +EGLF+   K  +P  PK IAV+TSPTGAVI DI + +  R+P  ++++FP  VQG
Sbjct: 120 NKLSQEGLFNLPKKK-LPTFPKKIAVVTSPTGAVIEDITRTVQRRYPSAQIVLFPAVVQG 178

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++    I   IL+++ L         D +I+ RGGGSIEDLW FNDE + R IA + IPI
Sbjct: 179 EKAAATIIQQILRIDEL------GDYDTLIVGRGGGSIEDLWAFNDEKLARVIAAARIPI 232

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKY 302
           IS++GHETD TL D+ AD RA TPT AAE++ PV  E + S L  L+ RLN  + +L+  
Sbjct: 233 ISSVGHETDNTLVDFVADQRAATPTAAAELSTPVTLEQVISRLNELQIRLNLRMKQLVDV 292

Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   +  + + +     D+  +    R+D+L                             
Sbjct: 293 RRQRVERITQHIIFQQPDRLYTGYNQRVDQLCHT-------------------------- 326

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                            Q ++Q +K     + L  + ++ +  +L  Q +  +  +   +
Sbjct: 327 ---------------LTQVLQQRLKTTKHQLMLLLQRQLQVRQILLRQPQEHVQLMAAKL 371

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                                       L+        KRGY  I+  ++  +    ++ 
Sbjct: 372 D-----------------------LVSPLKIL------KRGYVLIE-KDSQVVRTINDVQ 401

Query: 481 TKTRILINFFDGQANAIVINKA 502
               I + F DG A A +I  +
Sbjct: 402 RNDTIDLRFSDGMAKAKIIETS 423


>gi|109947858|ref|YP_665086.1| exodeoxyribonuclease VII large subunit [Helicobacter acinonychis
           str. Sheeba]
 gi|123173279|sp|Q17W89|EX7L_HELAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|109715079|emb|CAK00087.1| exodeoxyribonuclease VII large subunit [Helicobacter acinonychis
           str. Sheeba]
          Length = 420

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 193/389 (49%), Gaps = 6/389 (1%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I   +++G  +
Sbjct: 4   LSVSEINAKIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCTLFRGNAS 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F  +EG E  V G I+ +P    YQI    + P   G+L  ALE+ K+KL  +G F 
Sbjct: 64  KLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKGYFD 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
            ++K P P  PK +A+ITS   A   D+ +    R+P+  ++     +QG+ C + +  +
Sbjct: 124 KENKLPKPSFPKRVAIITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSVVES 183

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D+
Sbjct: 184 IAYADSFY--NTRNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESDF 241

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D  ADLRA TP+ A E+ +P  E  Q  L     +L      L+  K   L  L  +
Sbjct: 242 LLSDSVADLRASTPSNAMEILLPSSEEWQQKLDGFNLKLQRSFKILLHQKKVHLEHLAAS 301

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L     +     +  +L++L   LE+     +  K      I  ++ S       +  R 
Sbjct: 302 LKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQL-STSPFLQTKTERL 360

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
           + L+    +     +  ++     K   A
Sbjct: 361 NALDNALKLAHAHLKLPKFGAFVSKNNQA 389


>gi|326317448|ref|YP_004235120.1| exodeoxyribonuclease VII large subunit [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323374284|gb|ADX46553.1| exodeoxyribonuclease VII, large subunit [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 437

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 194/383 (50%), Gaps = 7/383 (1%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              +     + V  L   +   +E+  + V VRGEI+G+    SSGH YFS+KD   +I 
Sbjct: 5   PDPASAPRIWDVGALCRAVADALEARFNPVAVRGEITGF-SRASSGHCYFSIKDGQGQIR 63

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++     ++  P +G    + G++  +      Q+I+ESL  +G G L     + K 
Sbjct: 64  CAMFRRAAMLLDGTPRDGEMVELRGRLAVYEARGDLQLIVESLQRAGQGALFEQFLRLKA 123

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  EGLF    K  +P +P+ I ++TSP  A + D++  +  R P L V++ P  VQG 
Sbjct: 124 RLESEGLFDSARKRGLPVMPRSIGLVTSPGAAALHDVVTALRRRVPHLPVVLAPALVQGA 183

Query: 185 ECPKEIANAILQLNTLKE----GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
             P  I  A+  L  + E    G   P  ++I+L RGGGSIEDLW FNDE + R +A S 
Sbjct: 184 AAPASICAALHALYRMAEPSGDGAGHPPVEVILLVRGGGSIEDLWAFNDEQVARTLAKSP 243

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +    + +  L  RL++ + R I
Sbjct: 244 VPVVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPQATWLAGMDALAGRLSDSLQRQI 303

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+   + L      ++    RL RL ++L H       R  +  + + +R+   
Sbjct: 304 DGRHQRLDMAAQRLGRPSGLVARQELRLARLAQQLRHGAAWTARRCAQRQDGLADRL-PK 362

Query: 361 FLIHNIQKNRQHILEKQQHIEQI 383
            +   + +  Q +      +E +
Sbjct: 363 AVAQGVARQAQRLDHAALRLELL 385



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 4/141 (2%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           SD L   I    Q +    Q + +      R      +    +   LR            
Sbjct: 296 SDSLQRQIDGRHQRLDMAAQRLGRPSGLVARQELRLAR----LAQQLRHGAAWTARRCAQ 351

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
               L  R+   ++  +      +      L+    +  L+RGY  + D+    +T+   
Sbjct: 352 RQDGLADRLPKAVAQGVARQAQRLDHAALRLELLDPRLVLQRGYALLTDSEGLPVTRTAQ 411

Query: 479 LATKTRILINFFDGQANAIVI 499
           + T   +     DG+ +  V 
Sbjct: 412 VRTGDAVRAAVSDGEIDLTVS 432


>gi|260438373|ref|ZP_05792189.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio crossotus DSM
           2876]
 gi|292808959|gb|EFF68164.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio crossotus DSM
           2876]
          Length = 407

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 117/362 (32%), Positives = 196/362 (54%), Gaps = 14/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              Y+V +++ ++K++ +++    ++ ++GEIS  +  H+SGH YF+LKD  S I A+++
Sbjct: 2   ANIYTVLQINSYIKNMFDTDFVLKNINIQGEISNLK-YHTSGHIYFTLKDKDSTISAVMF 60

Query: 70  KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
            G  +  + F   +G++ +V G I+ F  S KYQI    +  +GSG L       K +L 
Sbjct: 61  AGSRMKGLNFRLRDGMKVVVTGNISVFEASGKYQIYAREIKETGSGELYERFVNLKNELE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G+F + +K PIP   K + V+T+ TGA + DI+     R P + +I++P KVQG+   
Sbjct: 121 EMGMFDEIYKKPIPKNIKRLGVVTARTGAAVHDIISVSRRRNPGIDIILYPAKVQGEGAA 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + +   I  L+           D+II+ RGGGSIEDLW FN+E + R + N + P+ISA+
Sbjct: 181 ESVCTGIRFLDKA-------GVDLIIVGRGGGSIEDLWAFNEECVAREVFNCNTPVISAV 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD+T+ D+ +DLRAPTP+ AAE+AV     ++  L+ L A LN  I   +K   + +
Sbjct: 234 GHETDFTIIDFVSDLRAPTPSAAAELAVSDVSKIRDRLLELNAGLNIRINGFLKNYSDRI 293

Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            S    L   +    L      L     +L +++  ++      F  +  R+     +  
Sbjct: 294 ASYNVKLNYLSPANILEARENLLRNYYYKLNNSINAVMKNYTSVFQILCTRLDGLSPLTR 353

Query: 366 IQ 367
           ++
Sbjct: 354 LK 355



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 16/158 (10%), Positives = 47/158 (29%), Gaps = 5/158 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-----HMLREQT 409
           + +++       +     + + +  + ++       I    K     +      +     
Sbjct: 246 SDLRAPTPSAAAELAVSDVSKIRDRLLELNAGLNIRINGFLKNYSDRIASYNVKLNYLSP 305

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
            N +      ++    ++   ++  +K+  +   I    L   +    LK GY+ + D  
Sbjct: 306 ANILEARENLLRNYYYKLNNSINAVMKNYTSVFQILCTRLDGLSPLTRLKGGYSYVCDEG 365

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            + I    ++     + I   DG   A        +  
Sbjct: 366 GSNINSVEDIRPDDTLNIYVTDGIITATAKKITKKEGT 403


>gi|307353977|ref|YP_003895028.1| exodeoxyribonuclease VII large subunit [Methanoplanus petrolearius
           DSM 11571]
 gi|307157210|gb|ADN36590.1| exodeoxyribonuclease VII, large subunit [Methanoplanus petrolearius
           DSM 11571]
          Length = 413

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 121/370 (32%), Positives = 202/370 (54%), Gaps = 16/370 (4%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESN-LSHVCVRGEISGYRGIHSSGHAYFSLKDN---- 60
           +++S ++   SVSE+S  +K  ++ + L  + + GE++  +  H+SGH YFS+ ++    
Sbjct: 7   EEDSGENKIKSVSEISAIIKSRLDDDSLRGIWIEGEMTNLKN-HASGHLYFSMTESVYGR 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              I+  +W+ +  ++ F PE G++    G +  +    KYQ I+  L  +G+G     +
Sbjct: 66  EYLINCAMWRSSAREVGFRPENGMKVRAYGSVEVYEPHGKYQFIVRELSAAGAGDKHFLV 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+ K++L EEGLF +  K  +P  P+ + V++SP+GA  RDI   IS R+P+ +I+ P  
Sbjct: 126 ERWKRELAEEGLFDEVFKKMLPQFPRKVGVVSSPSGAARRDIENVISRRYPVEIILSPAL 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    +IA AI +++ L         D+II+ RGGGS EDL+ FN   +VRA+    
Sbjct: 186 VQGDNAHADIARAIRRIDGL--------VDVIIVGRGGGSFEDLFPFNHPDVVRAVFECK 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SA+GHE D+TL D AAD+RAPTP+ AAE+ VP +  L++ L + E  L N +   I
Sbjct: 238 TPVVSAVGHEIDFTLVDLAADVRAPTPSAAAEIVVPDRCELENQLRSYEKTLMNSVTDRI 297

Query: 301 KYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L      L     +Q ++    RLD L   L H++   I R+      +   + 
Sbjct: 298 TRERELLEGFRLRLQPKKFEQLINEEFQRLDDLFGRLNHSMNGYIERQRMSLGLLRASLA 357

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 358 ASDPKKPLER 367



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 56/164 (34%), Gaps = 6/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    +   +++       +       E +  +    K  +  +      +  +L 
Sbjct: 246 HEIDFTLVDLAADVRAPTPSAAAEIVVPDRCELENQLRSYEKTLMNSVTDRITRERELLE 305

Query: 404 MLREQTKNR-----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             R + + +     I      +  L  R+   ++  I+    S+ +    L +   K  L
Sbjct: 306 GFRLRLQPKKFEQLINEEFQRLDDLFGRLNHSMNGYIERQRMSLGLLRASLAASDPKKPL 365

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +RGY  ++  N++ +    +L    R+ I   DG+  A++ +  
Sbjct: 366 ERGYCIVR-KNDSVVRSAADLFRDDRVEIVLKDGECKAVIEDVN 408


>gi|163849261|ref|YP_001637305.1| exodeoxyribonuclease VII large subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222527251|ref|YP_002571722.1| exodeoxyribonuclease VII large subunit [Chloroflexus sp. Y-400-fl]
 gi|163670550|gb|ABY36916.1| exodeoxyribonuclease VII, large subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222451130|gb|ACM55396.1| exodeoxyribonuclease VII, large subunit [Chloroflexus sp. Y-400-fl]
          Length = 397

 Score =  273 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 111/359 (30%), Positives = 188/359 (52%), Gaps = 13/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           ++VS+L+  L+  +E       + +  E+  +R    SGH YF+LKD  + I A++W+  
Sbjct: 4   FTVSDLNSALRAHLEDEGLFFDIWLLAEVVEFRRYP-SGHCYFTLKDEQASIRAVLWRSK 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             +I  LP  G   L  G++  +    + Q +++ ++P+G G L   LE  + +L  EGL
Sbjct: 63  AEQIALLPANGDAVLAHGRVGFYEARGELQFVVDQIVPAGVGLLNAQLEHLRARLEAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F ++ K  +P +P+ I ++TSP  A ++D+L  +  R+PL  VI+ P  VQG+  P  I 
Sbjct: 123 FDERRKRLLPVLPRRIGIVTSPQAAALQDMLTILRRRYPLAEVILSPCLVQGELAPASIV 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ +             D+IILARGGG+ +DL  FNDE +VR +A S +PII+ +GHET
Sbjct: 183 AALRRAYA-------EPLDVIILARGGGASDDLAAFNDEQVVRTVAASPVPIITGVGHET 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TL D  AD+RAPTP+ AAE+  P    L+  +I+L  R    ++  I  + + +    
Sbjct: 236 DTTLVDAVADVRAPTPSAAAELVAPPLADLRQRVIDLRERAEVALLTGIDAQRSEVARQR 295

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L   +  + L  +R  +D L   L+      +  +    + + +R+ +      + +
Sbjct: 296 LLLQRHHPRRRLDAARQTIDDLMLRLDRAFSRWLQLERTRLHGLHSRLNTLSPQATLAR 354



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   RQ +++ ++  E  +   +     E       L + R   + R+      I  L+ 
Sbjct: 262 LADLRQRVIDLRERAEVALLTGIDAQRSEVAR--QRLLLQRHHPRRRLDAARQTIDDLML 319

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R++   S  ++   T +      L + + + TL RGY   Q  +   IT    + T  RI
Sbjct: 320 RLDRAFSRWLQLERTRLHGLHSRLNTLSPQATLARGYAIAQHADGRVITDSSQVQTGERI 379

Query: 486 LINFFDGQANAIVINKA 502
            +    G  +A V +  
Sbjct: 380 ALTLRAGIVHATVESTN 396


>gi|223038616|ref|ZP_03608909.1| exodeoxyribonuclease VII, large subunit [Campylobacter rectus
           RM3267]
 gi|222880018|gb|EEF15106.1| exodeoxyribonuclease VII, large subunit [Campylobacter rectus
           RM3267]
          Length = 387

 Score =  273 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 183/344 (53%), Gaps = 11/344 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E+  S+V V GEIS     H SGH YF+LKD  + I A+I+K    
Sbjct: 2   LSVSELNEQAKTLLETTFSYVEVGGEISRLV-KHGSGHWYFTLKDEKAAISAVIYKFNAA 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F   +G++  + GKI+ +  S  YQ I   + PSG G L  A ++ K +L  EGLF 
Sbjct: 61  KLKFDVADGMKVALYGKISLYSPSGSYQFIATLIRPSGEGELELAFKQLKARLESEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193
              K P+P  P+ IA++TS T A ++D+L+  S R+ P  +I+F    QG+  P  +  A
Sbjct: 121 ISRKKPLPKFPRKIALVTSKTSAALQDMLRIASQRWAPAEIIVFDSLTQGETAPASLIRA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + +T          D I+LARGGGS EDLW FNDE + R I  +  P+ISA+GHE D+
Sbjct: 181 LKRADTS-------GADAIVLARGGGSREDLWCFNDENLAREIYAARTPVISAVGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+AAD RAPTP+ A    +P    L  S+  L    +   +R+ + K N L  +   
Sbjct: 234 VISDFAADFRAPTPSAAMAALLPDAGELMQSIDRLSEAADAAFMRVWERKFNALAMMRAR 293

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
              +  +Q ++     L  L + L+   +  + +          
Sbjct: 294 FSQASLEQKIARKEQILLNLRQVLDAAAQTKLLKFENALKLARA 337


>gi|169831183|ref|YP_001717165.1| exodeoxyribonuclease VII, large subunit [Candidatus Desulforudis
           audaxviator MP104C]
 gi|226694646|sp|B1I3J0|EX7L_DESAP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169638027|gb|ACA59533.1| exodeoxyribonuclease VII, large subunit [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 406

 Score =  273 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 193/372 (51%), Gaps = 12/372 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SV EL+ ++K  +ES+  L+HV VRGE+S     H SGH YF LKD  +RI  ++++  +
Sbjct: 9   SVRELTGYIKERLESDPFLAHVWVRGEVSACT-RHPSGHLYFFLKDEAARIRVVMFRSQV 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           +++    E G   +V G +  +  + +YQ+  +     G+G L  ALE+ K+KL  EGLF
Sbjct: 68  SRLGVPLENGTTVVVRGYLGVYERNGEYQLYAQGAEAEGAGKLHAALERLKEKLQREGLF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192
               K  +P +P  + V+TSP GA ++DIL  +  R+ P RV++ PV VQG+  P EIA 
Sbjct: 128 DPARKRALPALPDTVGVVTSPVGAALKDILTIMRRRWPPARVLLAPVSVQGETAPYEIAQ 187

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI  LN           D+II+ RGGG+ E+L  FN E++ RAI  S IP++SA+GHE D
Sbjct: 188 AIRALN------GAGGVDVIIVGRGGGAPEELAAFNTEVVARAIFESRIPVVSAVGHEKD 241

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  AD RAPTP+ AAE  VP +  ++  L  +E+RL   +   +      L +L +
Sbjct: 242 VTVADLVADWRAPTPSAAAEAVVPDQRAVRERLAAVESRLGRAVRHRLAVYRVRLEALRQ 301

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              + +        R  +  L   L   +             +  R+++   +  + +  
Sbjct: 302 RPVMASPGVLCRRRREVVRSLEERLGGAIGRRTGEGRSRLAVLSGRLEALSPLQVLARGY 361

Query: 371 QHILEKQQHIEQ 382
                    I +
Sbjct: 362 SICRRADGRIVR 373



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 47/136 (34%), Gaps = 2/136 (1%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R+ +   +  + + V    R      + +      +              ++ L  R+  
Sbjct: 271 RERLAAVESRLGRAV--RHRLAVYRVRLEALRQRPVMASPGVLCRRRREVVRSLEERLGG 328

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +  +     + +++ +  L++ +    L RGY+  +  +   +     ++   R++I  
Sbjct: 329 AIGRRTGEGRSRLAVLSGRLEALSPLQVLARGYSICRRADGRIVRDADGVSPGERVIIWL 388

Query: 490 FDGQANAIVINKAPPK 505
             G  + +V    P +
Sbjct: 389 HAGGLSCLVEETFPSR 404


>gi|317010539|gb|ADU84286.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           SouthAfrica7]
          Length = 420

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 122/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I   +++G  +
Sbjct: 4   LSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCTLFRGNAS 63

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F  +EG E  V G I+ +P    YQI    + P   G+L  ALE+ K+KL  +G F 
Sbjct: 64  KLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKGYFD 123

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
            ++K P P  PK +AVITS   A   D+ +    R+P+  ++     +QG+ C + +  +
Sbjct: 124 KKNKLPKPSFPKRVAVITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSVVES 183

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   ++     T    D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D+
Sbjct: 184 IAYADSFH--NTKNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESDF 241

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D  ADLRA TP+ A E+ +P  E  Q  L     +L      L+  K   L  L  +
Sbjct: 242 LLSDSVADLRASTPSNAMEILLPSSEEWQQKLDEFNLKLQRSFKILLHQKRVHLEHLAAS 301

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L     +     +  +L++L   LE+     +  K      I  ++ +   +    +   
Sbjct: 302 LKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERLN 361

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
            +    +     +K      F+ K  +   L  L+   +  +      
Sbjct: 362 RLDNALKLAHAHLKLPKFGAFVSKNNQAVELEALKMGDRIELSNEKAR 409


>gi|160945197|ref|ZP_02092423.1| hypothetical protein FAEPRAM212_02716 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442928|gb|EDP19933.1| hypothetical protein FAEPRAM212_02716 [Faecalibacterium prausnitzii
           M21/2]
          Length = 407

 Score =  272 bits (696), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 129/407 (31%), Positives = 213/407 (52%), Gaps = 17/407 (4%)

Query: 16  SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS+L++++K +++    L  + +RGEI+ +     SGH YFSL+D+   + A++++   
Sbjct: 6   SVSDLNHYVKTLLDVNDGLFDLALRGEIANFVQNARSGHCYFSLRDDACSVKAVMFRTDA 65

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            ++ F PEEG+  +V  + T +     +Q+ +  + P G G    ALE+ K +L +EGLF
Sbjct: 66  RRLAFRPEEGMRVVVRCRATLYERDGAFQVYVNEMFPDGLGAAQLALEQLKARLEKEGLF 125

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              +K P+P  P+ I V+TS TGA ++DI   IS R+P +R+++ PV VQG E  ++IA 
Sbjct: 126 DPVYKKPLPAYPECIGVVTSKTGAALQDIRNVISRRWPSVRLLLCPVTVQGFEAARQIAA 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           AI  L+         + D II+ARGGGS EDLW FN E I RA      P+ISAIGHE D
Sbjct: 186 AIRTLDQ------SGKVDEIIVARGGGSREDLWVFNAEEIARAAFRCKTPLISAIGHEID 239

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T+ D+ AD RAPTP+ AAE+AVP +E  Q    N+E  ++  I + +    N L     
Sbjct: 240 YTILDFVADQRAPTPSAAAELAVPDREEQQRIFENIEENIHKNIQKRLALCYNGLEQYNF 299

Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            L      + L     RL ++ + ++   +  +  K   F H      S      + +  
Sbjct: 300 LLEQSAPSKILQQYSSRLQQVQQAIQAQQKTRMNDKNMQFQHAAALAASLDPYRVLARGY 359

Query: 371 QHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
             + + +      + ++      +R    + + ++  +  + E T+ 
Sbjct: 360 ALVTDTKGKVCTVEQLQPEQPICVRSRQYQARCRVETVEEINESTQK 406



 Score = 63.6 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           ++ ++     +++I + +++ L   +   ++   +L   +      +    + ++++   
Sbjct: 266 EEQQRIFENIEENIHKNIQKRLALCYNGLEQYNFLLE--QSAPSKILQQYSSRLQQVQQA 323

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           I+     ++   +        +  S      L RGY  + DT     T    L  +  I 
Sbjct: 324 IQAQQKTRMNDKNMQFQHAAALAASLDPYRVLARGYALVTDTKGKVCT-VEQLQPEQPIC 382

Query: 487 IN 488
           + 
Sbjct: 383 VR 384


>gi|330836749|ref|YP_004411390.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta coccoides DSM
           17374]
 gi|329748652|gb|AEC02008.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta coccoides DSM
           17374]
          Length = 404

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 10/357 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+  +K  +      + V GEIS +R   SSGH YF+LKD  + + A++++G  +
Sbjct: 12  LSVSELTSLIKKTLAGGFYDLNVEGEISNFR-PSSSGHWYFTLKDADAMLSAVMFRGKAS 70

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F P +G   +V G I  +     YQII  S+   G G L   LE+ K      G F 
Sbjct: 71  MLDFFPRDGEMVVVTGAIDVYEKRGTYQIICSSMTRVGEGNLQARLEQLKNHYASLGYFD 130

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANA 193
              K  IP  P+ +AV+TS +GA + DILQ +  R   L V+I P +VQGDE    IA  
Sbjct: 131 PASKKSIPPDPQRVAVVTSESGAALHDILQVLGRRAAGLDVVILPTRVQGDEAAASIATR 190

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I Q +           D+II+ARGGGS+EDL  F+D  ++ AI + ++P+ISA+GHE DW
Sbjct: 191 IRQADRF------LLGDVIIVARGGGSLEDLMPFSDPSVIEAIHDCALPVISAVGHEIDW 244

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLL 311
            L+DY AD+RAPTP+ AAE+    +      L  + + L ++I   +       +  S  
Sbjct: 245 MLSDYVADIRAPTPSAAAELVSASRSERLEKLRAVRSTLVHLIQNRLSEARMLLSQASPR 304

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                    +  +RY LD +   ++  L     +  R       ++++      +++
Sbjct: 305 TLSERLVSRIEQNRYLLDDMDMRMKETLLHRFEQARRTLASHTAQLQALSPQSILER 361



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 6/160 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
                  +  +  I++         +  +R   LEK + +   +   ++    E +  ++
Sbjct: 240 HEIDWMLSDYVADIRAPTPSAAAELVSASRSERLEKLRAVRSTLVHLIQNRLSEARMLLS 299

Query: 401 ILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                   E+  +RI      +  +  R++  L H+ +    +++  T  LQ+ + ++ L
Sbjct: 300 QASPRTLSERLVSRIEQNRYLLDDMDMRMKETLLHRFEQARRTLASHTAQLQALSPQSIL 359

Query: 459 KRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAI 497
           +RGY  I DT     +T    LA +  I I+  DG   A 
Sbjct: 360 ERGYAVITDTMTGQNMTSATQLAGEKDITIHLHDGSVAAT 399


>gi|73666662|ref|YP_302678.1| exodeoxyribonuclease VII large subunit [Ehrlichia canis str. Jake]
 gi|72393803|gb|AAZ68080.1| Exodeoxyribonuclease VII large subunit [Ehrlichia canis str. Jake]
          Length = 388

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 156/342 (45%), Positives = 215/342 (62%), Gaps = 9/342 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            PE++VSEL+   ++ V    +H+ VRGEIS       SGH YF+LKD+ + ++A+ W  
Sbjct: 2   IPEFTVSELTKIFQNFVHETFTHIKVRGEISNL-SQPKSGHTYFTLKDDDAVLNAVCW-- 58

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              KIEF  + G+E +  G +TT+   SKYQ+I ES++ +G G L   LE+RK KL +EG
Sbjct: 59  NNTKIEFDLKNGLEVICFGFLTTY--QSKYQLITESMLLAGIGNLKIMLEQRKAKLEKEG 116

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF+  +K  +P +PKII VITS TGAVI DIL R+  RFP  ++I PV VQG+E   +I 
Sbjct: 117 LFNQSNKKHLPLLPKIIGVITSTTGAVINDILNRVKSRFPSHIVISPVSVQGNEAINQII 176

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           NAI +LN         RPD+II+ARGGGSIEDLW FNDE IVRA+A SSIPI+SAIGHET
Sbjct: 177 NAISKLN----NSDINRPDVIIIARGGGSIEDLWIFNDEAIVRAVAGSSIPIVSAIGHET 232

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL DYAAD+RAPTPT A E+ +P K  L   + +   ++  I+   I  K + L  L 
Sbjct: 233 DFTLIDYAADIRAPTPTAAVEIVLPTKTQLVELINSRFNKIKTILHYKINIKKDRLFYLH 292

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
             L  +   +   + +L     ++E  L+I++  K +  N +
Sbjct: 293 NNLMKTKHKIKVLKLQLLEHKSQIEVLLKIMLLNKKQSLNEL 334



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 59/130 (45%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +  ++E        +K  L Y    KK+++  LH    +TK++I  L   + +  ++IE 
Sbjct: 259 KTQLVELINSRFNKIKTILHYKINIKKDRLFYLHNNLMKTKHKIKVLKLQLLEHKSQIEV 318

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L   + +   S++     +  F  +  L+ GY  I DTNNN I   + L +   I I  
Sbjct: 319 LLKIMLLNKKQSLNELYYKINQFNKEKILEAGYAVIYDTNNNHINSIKKLQSNDIISIEL 378

Query: 490 FDGQANAIVI 499
            DG   AI+ 
Sbjct: 379 KDGIVEAIIK 388


>gi|317498986|ref|ZP_07957268.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893735|gb|EFV15935.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 406

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 14/373 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    +SV++++ ++K + +S+  L  + ++G++S  +  HSSGH YFSLKD  S+I  +
Sbjct: 1   MKSKVFSVTQINTYIKRMFQSDYALRRISIKGQVSNCK-YHSSGHIYFSLKDEESQISCV 59

Query: 68  IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++     N ++F  E+G E +V G ++ +     YQ+  + +  +G G L  A E  K+K
Sbjct: 60  MFASARYNGLQFELEDGQEVIVDGNVSVYERGGSYQLYAQEIRLNGIGELYVAYEMLKQK 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L EEGLF  + K PIP  PK I V+T+ TGA I DI+     R P ++++++P KVQG+ 
Sbjct: 120 LYEEGLFDHEIKKPIPKNPKKIGVVTARTGAAIHDIISTAKRRNPYVQLVLYPAKVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I + I  L+           D II+ RGGGSIEDLW FN+E + RAI  +  PIIS
Sbjct: 180 ASDTIVSGIRTLDQ-------YGVDTIIIGRGGGSIEDLWAFNEENVARAIYEAKTPIIS 232

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
             GHE D T+ADYAADLRA TPT A E+AVP    +   + N E  +  ++ ++I+    
Sbjct: 233 GTGHEVDTTIADYAADLRAATPTAACELAVPDITEVMEGIANREYTMAALLKQIIRRYQM 292

Query: 306 TLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L      + N      L   + RL  L  +++  ++  +             +      
Sbjct: 293 KLQKYQITIANYDPRFQLQEQKMRLSELEEQIQQVMKNKMTGYKHKLELYAKELHGLSPT 352

Query: 364 HNIQKNRQHILEK 376
             +     ++ ++
Sbjct: 353 AKLINGFGYLEDQ 365



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 57/142 (40%), Gaps = 2/142 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  + I  ++  +  ++KQ +R   ++ ++    + +     + ++      + +L  
Sbjct: 265 ITEVMEGIANREYTMAALLKQIIRRYQMKLQKY--QITIANYDPRFQLQEQKMRLSELEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           +I+ ++ +K+      + +  + L   +    L  G+  ++D N   +T    +    +I
Sbjct: 323 QIQQVMKNKMTGYKHKLELYAKELHGLSPTAKLINGFGYLEDQNGEPVTSVHKVKEGDQI 382

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            +   DG   A+        E+
Sbjct: 383 SLTISDGTILAMAKQIRTMDEK 404


>gi|269123685|ref|YP_003306262.1| exodeoxyribonuclease VII, large subunit [Streptobacillus
           moniliformis DSM 12112]
 gi|268315011|gb|ACZ01385.1| exodeoxyribonuclease VII, large subunit [Streptobacillus
           moniliformis DSM 12112]
          Length = 442

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 130/490 (26%), Positives = 218/490 (44%), Gaps = 57/490 (11%)

Query: 15  YSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            +VSE+   +   ++ S +  V + GEIS     H +GH YF+LKD++S+I    +    
Sbjct: 5   LTVSEIVNLVDRFIKTSEMKKVSIEGEISNIT-YHKTGHLYFTLKDSNSQIKCTAFGYLY 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGL 132
             I    +EG +  ++  I+ +    +    +E L      G L   LE+ KK+ LE+G 
Sbjct: 64  KNIPRDLKEGDKIKIVADISFYKPRCELTFNVEILEKMNKIGYLYEKLEELKKEYLEKGY 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K  IP I K + VIT+ TGA IRDI+     R   + + ++PVKVQG    +EI 
Sbjct: 124 FDSNKKKKIPMIVKRLGVITAETGAAIRDIVNTTHSRDKYVDIFLYPVKVQGIGAKEEIV 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI   N   + +     D +I+ RGGGSIEDLW FN+  ++ AI +S I ++SA+GHET
Sbjct: 184 EAIKYFN---DNKDKYNLDALIVGRGGGSIEDLWAFNEREVIEAIYSSDIFVVSAVGHET 240

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--S 309
           D  L+DY ADLRA TPT AAE  +   +     L + E + + I+    K     L   +
Sbjct: 241 DTLLSDYVADLRASTPTQAAEKIIKRYDDTLYFLNSFEDKASKILENKYKSLKKELENLN 300

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               + N    ++  R  +  L  + E  + + I ++  +     +++  + L       
Sbjct: 301 NSYIIRNIGDRINEKRILISELETKAEKAMNLKINKEKNNIEVFKSKLNINNLT------ 354

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
                                       K+  L++L +   ++I  +             
Sbjct: 355 ---------------------------TKVNSLNILLQSQSDKISKI------------- 374

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            + +KI+     +      +   + ++ LK+GYT       N I +  ++++   I   F
Sbjct: 375 -IENKIEKKKLELENIKLSVSKHSNEDILKKGYTITTYK-GNIIKRSIDISSGNTIKTTF 432

Query: 490 FDGQANAIVI 499
           +DG   + V 
Sbjct: 433 YDGYIESKVK 442


>gi|193212044|ref|YP_001997997.1| exodeoxyribonuclease VII large subunit [Chlorobaculum parvum NCIB
           8327]
 gi|193085521|gb|ACF10797.1| exodeoxyribonuclease VII, large subunit [Chlorobaculum parvum NCIB
           8327]
          Length = 402

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 199/356 (55%), Gaps = 6/356 (1%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SV EL+  +K  +ES    V V+GE+S  + +HSSGH Y +LKD+ +++ A++WK    +
Sbjct: 7   SVGELTRTIKSELESLFPFVRVKGELSNCK-LHSSGHVYLTLKDSEAQLPAVMWKSVRTR 65

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 +G+E +  G++  +P + +YQ+I  +L  +G G    ALE+   KL + G F  
Sbjct: 66  FPMELRDGLEVIAEGRLEVYPPAGRYQLICTALFETGEGAQRLALERLIAKLAQAGYFDP 125

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K PIP IP+ I +ITS TGAVIRD+    + RFP   ++++PV+VQG+   + I  A+
Sbjct: 126 ERKKPIPRIPRRIGMITSSTGAVIRDMSDVFARRFPAAELLLYPVQVQGERAVESIVRAL 185

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N         RPD++I+ARGGGS EDL  FNDE +  AI  S IP+ISA+GHETD +
Sbjct: 186 RYFND--PPIPEHRPDVLIVARGGGSAEDLQAFNDEAVAEAIYQSKIPVISAVGHETDLS 243

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD  ADLRA TP+ AAE AVP ++ L   +  L  R + ++   I      L+S+  + 
Sbjct: 244 VADMVADLRAGTPSIAAERAVPDRDELLRHIDGLMQRQSILMEGKISGAQLQLDSITSSY 303

Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                 Q L     RL    +E++  +   +  + +      +R++   +   +++
Sbjct: 304 AFNRPAQMLGQVEERLALTEKEMKRAMAEKVRDREQQLRAATDRLEMLDIQRVLKR 359



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 6/155 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHI-----EQIVKQHLRYIFLEKKEKIAILHMLREQT 409
             +++       ++      E  +HI      Q +    +    + +           + 
Sbjct: 249 ADLRAGTPSIAAERAVPDRDELLRHIDGLMQRQSILMEGKISGAQLQLDSITSSYAFNRP 308

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +  +   +      ++  ++ K++     +   T  L+    +  LKRG+  +   +
Sbjct: 309 AQMLGQVEERLALTEKEMKRAMAEKVRDREQQLRAATDRLEMLDIQRVLKRGFALV-SQD 367

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
           + ++T  + L    +I I F DG+  A V N+  P
Sbjct: 368 DRYVTSAKALEEGAKIGITFHDGRREAKVTNQTFP 402


>gi|256752866|ref|ZP_05493704.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748243|gb|EEU61309.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 401

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 135/407 (33%), Positives = 222/407 (54%), Gaps = 13/407 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      V E++ ++K +++++  L +V V+GEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +V G+I+ +  +  YQ+  +S+   G G L  A  K K+KL
Sbjct: 59  MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA   LN  K+       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNAFRILNKRKD------IDVIILARGGGSLEEIWPFNEEKVARCIYASCIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ +L  ++   +  K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L +  +     R++++ L   L + +  I   K   F  +  ++ S   + 
Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +    +L+KQ+ +   V+    Y  ++   K      + ++ K 
Sbjct: 353 VLTRGYTIVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVKE 399



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 35/99 (35%)

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +       +   L   ++ L   +   +    +       I    L S +    L RGYT
Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + D     I+  R++     I I F DG+A AIV    
Sbjct: 360 IVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVK 398


>gi|150400340|ref|YP_001324107.1| exodeoxyribonuclease VII large subunit [Methanococcus vannielii SB]
 gi|150013043|gb|ABR55495.1| exodeoxyribonuclease VII, large subunit [Methanococcus vannielii
           SB]
          Length = 410

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 134/365 (36%), Positives = 206/365 (56%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S      SVSEL+ ++K+ +E++L      ++GEIS    +H SGH YF+LKD    ID 
Sbjct: 8   SAFSNTLSVSELNLYVKNTLENDLILKRASIKGEISNC-ILHRSGHIYFTLKDEEGAIDC 66

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++KG    + F+P++GI+ +V GK++ +  + KYQ+   S+   G G L    EK K+K
Sbjct: 67  VMFKGDARLLNFIPKDGIKVIVTGKVSIYAKTGKYQVYCNSMEKEGIGELYIKFEKLKEK 126

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
           L +EGLF +  K  IP   K I +ITSPTGA + DI++    R   + ++I+P  VQG+ 
Sbjct: 127 LEKEGLFDELKKKKIPRYAKNIGIITSPTGAALTDIIKVTRLRNRSVNLLIYPASVQGEN 186

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P EI N I +LN           D+IILARGGG+IEDLW FNDE + RAI  S  PI++
Sbjct: 187 APSEIINGISKLN------NHKDIDLIILARGGGAIEDLWCFNDESLARAIFKSEKPIVT 240

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D+T+AD+ +DLRA TP+ AAE++V  +  L S L NLE  L+  I+  I  K  
Sbjct: 241 GIGHEIDFTIADFVSDLRAATPSNAAEISVFNEFELISKLKNLEKNLSTKILTDISKKAY 300

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            ++ L       + +  +   +  L+R    + H ++     + + F    + + +   +
Sbjct: 301 EVDFLYSKFEKNSPNSKIEKQKAILERYNALITHEIKNKFAYELKRFEKAHSLLNAYNPL 360

Query: 364 HNIQK 368
           + + K
Sbjct: 361 NVLNK 365



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%)

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
           +    ++I      +++    I   + +K             +L ++   N L +GYT I
Sbjct: 311 KNSPNSKIEKQKAILERYNALITHEIKNKFAYELKRFEKAHSLLNAYNPLNVLNKGYTII 370

Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           Q+ +   I+ K  L +K  + I F DG  +  + 
Sbjct: 371 QNPDGRIISSKELLKSKKELKIIFKDGIVDVNIT 404


>gi|291276687|ref|YP_003516459.1| exodeoxyribonuclease VII large subunit [Helicobacter mustelae
           12198]
 gi|290963881|emb|CBG39717.1| exodeoxyribonuclease VII large subunit [Helicobacter mustelae
           12198]
          Length = 418

 Score =  272 bits (694), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/397 (30%), Positives = 202/397 (50%), Gaps = 9/397 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
               SVS L+  ++ ++E+    VCV GEIS     H+SGH YFS+KD  S I  ++++G
Sbjct: 2   ANPLSVSALNAQIQALLETTFLQVCVEGEISNLT-KHNSGHFYFSIKDQDSVISCVLFRG 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              K+ F+ E   + +V G I+ +     YQI+  ++ P G G L  A E+ +KK  + G
Sbjct: 61  NAQKLRFVLENAQKVIVQGSISVYVPRGNYQILCTNITPFGQGALHLAYEQLRKKYEKLG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F    K  +P  PK IA+ITS TGA ++D+L     R+  ++++ F   VQGDE   +I
Sbjct: 121 YFDAALKKKMPKFPKKIALITSNTGAALQDMLSVAKKRWNLVKLVNFDTLVQGDEAKFQI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A+ I  ++      +    D++I+ RGGGS+EDLW FN+E++++AI  +  PI+SA+GHE
Sbjct: 181 ADRIAYVDGFF--GSSDAFDVMIIGRGGGSMEDLWAFNEEIVMQAIFEARTPIVSAVGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D  L+D+ ADLRAPTP+ A EM +P K H    L  +   ++  + + +    + L+  
Sbjct: 239 IDVVLSDFVADLRAPTPSAAMEMILPEKHHWLLVLDEMGEEISLKMQKYLAQMQDRLSDY 298

Query: 311 LKALPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   +    +  +   L  L   L+    I         N +    +    +    +
Sbjct: 299 EYFLQQCNVGGRIHLAEEILQNLLVSLKQAARIFFD---CRANLLATEGQMAMAMEKFLQ 355

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
           +++  L K + + +  ++  R I +    +   L  L
Sbjct: 356 DKKLELLKWERLLRCEREKDRAIQISHDGRKVDLQNL 392


>gi|167037512|ref|YP_001665090.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115926|ref|YP_004186085.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|226697617|sp|B0K9E1|EX7L_THEP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|166856346|gb|ABY94754.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929017|gb|ADV79702.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 401

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 135/407 (33%), Positives = 223/407 (54%), Gaps = 13/407 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      V E++ ++K +++++  L +V V+GEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +V G+I+ +  +  YQ+  +S+   G G L  A  K K+KL
Sbjct: 59  MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA+  LN  ++       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ +L  ++   +  K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L +  +     R++++ L   L + +  I   K   F  +  ++ S   + 
Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +    +L+KQ+ +   VK    Y  ++   K      + ++ K 
Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%)

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +       +   L   ++ L   +   +    +       I    L S +    L RGYT
Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + D     I+  +++     I I F DG+A AIV    
Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398


>gi|167766575|ref|ZP_02438628.1| hypothetical protein CLOSS21_01081 [Clostridium sp. SS2/1]
 gi|167711698|gb|EDS22277.1| hypothetical protein CLOSS21_01081 [Clostridium sp. SS2/1]
 gi|291558611|emb|CBL37411.1| exodeoxyribonuclease VII, large subunit [butyrate-producing
           bacterium SSC/2]
          Length = 406

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 194/373 (52%), Gaps = 14/373 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    +SV++++ ++K + +S+  L  + ++G++S  +  HSSGH YFSLKD  S+I  +
Sbjct: 1   MKSKVFSVTQINTYIKRMFQSDYALRRISIKGQVSNCK-YHSSGHIYFSLKDEESQISCV 59

Query: 68  IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++     N ++F  E+G E +V G ++ +     YQ+  + +  +G G L  A E  K+K
Sbjct: 60  MFASARYNGLQFELEDGQEVIVDGNVSVYERGGSYQLYAQEIRLNGIGELYVAYEMLKQK 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L EEGLF  + K PIP  PK I V+T+ TGA I DI+     R P ++++++P KVQG+ 
Sbjct: 120 LYEEGLFDHEIKKPIPKNPKKIGVVTARTGAAIHDIISTAKRRNPYVQLVLYPAKVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I + I  L+           D II+ RGGGSIEDLW FN+E + RAI  +  PIIS
Sbjct: 180 ASDTIVSGIRTLDQ-------YGVDTIIIGRGGGSIEDLWAFNEENVARAIYEAKTPIIS 232

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
             GHE D T+ADYAADLRA TPT A E+AVP    +   + N E  +  ++ ++I+    
Sbjct: 233 GTGHEVDTTIADYAADLRAATPTAACELAVPDITEVMEGIANREYTMAALLKQIIRRYQM 292

Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L      + N D        ++    L  +++  ++  +             +      
Sbjct: 293 KLQKYQITIANYDPRFQLQEQKMHLSELEEQIQQVMKNKMTGYKHKLELYAKELHGLSPT 352

Query: 364 HNIQKNRQHILEK 376
             +     ++ ++
Sbjct: 353 AKLINGFGYLEDQ 365



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 58/142 (40%), Gaps = 2/142 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  + I  ++  +  ++KQ +R   ++ ++    + +     + ++     H+ +L  
Sbjct: 265 ITEVMEGIANREYTMAALLKQIIRRYQMKLQKY--QITIANYDPRFQLQEQKMHLSELEE 322

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           +I+ ++ +K+      + +  + L   +    L  G+  ++D N   +T    +    +I
Sbjct: 323 QIQQVMKNKMTGYKHKLELYAKELHGLSPTAKLINGFGYLEDQNGEPVTSVHKVKEGDQI 382

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            +   DG   A+        E+
Sbjct: 383 SLTISDGTILAMAKQIRTMDEK 404


>gi|167040174|ref|YP_001663159.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter sp.
           X514]
 gi|300914257|ref|ZP_07131573.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp.
           X561]
 gi|307724507|ref|YP_003904258.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter sp.
           X513]
 gi|226697618|sp|B0K0U8|EX7L_THEPX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|166854414|gb|ABY92823.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp.
           X514]
 gi|300889192|gb|EFK84338.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp.
           X561]
 gi|307581568|gb|ADN54967.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp.
           X513]
          Length = 401

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 134/407 (32%), Positives = 222/407 (54%), Gaps = 13/407 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      V E++ ++K +++++  L +V V+GEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +V G+I+ +  +  YQ+  +S+   G G L  A  K K+KL
Sbjct: 59  MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA   LN  ++       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNAFRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  L  L+ +L  ++   +  K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292

Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L +   L +  +     R++++ L   L + +  I   K   F  +  ++ S   + 
Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            + +    +L+KQ+ +   V+    Y  ++   K      + ++ K 
Sbjct: 353 VLTRGYTIVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVKE 399



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 35/99 (35%)

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +       +   L   ++ L   +   +    +       I    L S +    L RGYT
Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + D     I+  R++     I I F DG+A AIV    
Sbjct: 360 IVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVK 398


>gi|315652075|ref|ZP_07905076.1| exodeoxyribonuclease VII large subunit [Eubacterium saburreum DSM
           3986]
 gi|315485722|gb|EFU76103.1| exodeoxyribonuclease VII large subunit [Eubacterium saburreum DSM
           3986]
          Length = 392

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/358 (31%), Positives = 188/358 (52%), Gaps = 13/358 (3%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            YSVS+++ ++K++   +   + + V GE+S       S H YF++KD    + A+++  
Sbjct: 2   VYSVSKVNAYIKNMFMQDFVLNKISVEGEVSNCT-YAGSNHIYFTIKDEGGTLSAVMFAS 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               + F  + G   +V G I+ +    +YQ+    +  +G G L       K+KL + G
Sbjct: 61  QRGGLSFDMKRGQRVIVTGSISCYEKEGRYQLYAVKIEEAGKGELYEKYLILKEKLEDMG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F   +K  IP   + I V T+ TGAVI DI      R P +R+++ P  VQG+   K I
Sbjct: 121 MFDQSYKREIPRFVQSIGVATAQTGAVINDIKNVSYRRNPYVRIVLAPCLVQGESASKSI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI +L+ +         D+II+ RGGGSIEDL+ FNDE +   I N+  PIISA+GHE
Sbjct: 181 IAAIKKLDKI-------NLDVIIVGRGGGSIEDLYCFNDEKLAETIFNTKTPIISAVGHE 233

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+T+AD+ ADLRAPTP+ AAE+A  V +    +L   + +L     R + Y    L+ L
Sbjct: 234 TDFTIADFVADLRAPTPSAAAEIANFVYDDYMYTLDFYKKKLGECAGRKVDYTKRDLDML 293

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           L  L   +    L   + RL+   + ++++ + I+  K     ++  R+++   +  +
Sbjct: 294 LIRLNTLSPQIKLREQKQRLENFSKTIQNSFKNIMENKKTALTNLSKRLETVSPLKRL 351



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 390 YIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 K  + +L +       + ++      ++     I+    + +++  T+++  ++
Sbjct: 281 RKVDYTKRDLDMLLIRLNTLSPQIKLREQKQRLENFSKTIQNSFKNIMENKKTALTNLSK 340

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
            L++ +    L  GY  I D +N  +     L  +  I I F DG+  A V
Sbjct: 341 RLETVSPLKRLSGGYAYISDKDNKKVLSAAVLHKEDEINIFFSDGKIRAKV 391


>gi|327389447|gb|EGE87792.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae
           GA04375]
          Length = 412

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 136/461 (29%), Positives = 214/461 (46%), Gaps = 55/461 (11%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGNYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +                 
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKR---------------- 277

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                                     +   +  ++ +K          +           
Sbjct: 278 --------------------------MVTAVRNVLSKKQEALKKCSQSVIFRQPERLYDG 311

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             Q + + Q  ++Q ++  +       + +   L  L      +I      + +L   + 
Sbjct: 312 YLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQL--SPVTKIQRYQDRLGQLDKLLG 369

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
             ++    +        +  L        + RGY  ++  +
Sbjct: 370 SQMALVYDAKVAEAKRLSEALLMLDTSRIVARGYAIVKKKS 410


>gi|281356995|ref|ZP_06243485.1| exodeoxyribonuclease VII, large subunit [Victivallis vadensis ATCC
           BAA-548]
 gi|281316553|gb|EFB00577.1| exodeoxyribonuclease VII, large subunit [Victivallis vadensis ATCC
           BAA-548]
          Length = 418

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 115/368 (31%), Positives = 186/368 (50%), Gaps = 10/368 (2%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
               +SVS+++  ++ IVE +L    +RGE+     IH SGH YF++KD  S++  + + 
Sbjct: 26  TEQIWSVSDVNRAVREIVEGSLLPFWLRGEVGSLV-IHRSGHVYFTIKDTRSQMRGVFFG 84

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
           G     +     G      G +T +    +YQ     L  +G G L    E  K KL  E
Sbjct: 85  GAAACTKLGVANGTLIEAFGNLTVYEVRGEYQFSARQLRLAGIGDLQQRFEAVKNKLAAE 144

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K PIP +P+ I V+TSP+GA IRD LQ I+ RFP + V I+P  VQG    ++
Sbjct: 145 GLFDPGRKRPIPVLPRRIGVVTSPSGAAIRDFLQIINRRFPNVNVRIYPCAVQGAGAAEQ 204

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A  +   +           D++++ RGGGS+EDLW FN+E++ RA+A  S+P+ISA+GH
Sbjct: 205 VARGVDFFSR------TRGADVVVVTRGGGSMEDLWPFNEEVVARAVAACSVPVISAVGH 258

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D+T+ D+AADLR PTP+ AAE+ +  ++ +   L   E  L+N +   +    + L+ 
Sbjct: 259 EIDFTICDFAADLRVPTPSAAAELVIGRRQEMSDRLNRFEKDLHNTLNLALTRLKSRLDR 318

Query: 310 L--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                            R +LD L   L+ + E  +       + +   + +      ++
Sbjct: 319 AAGSFVFKEPAHLARMRRQQLDELENRLQGSAERWLLANRARLDQLAGTLTTLNPSRQLE 378

Query: 368 KNRQHILE 375
           +    + +
Sbjct: 379 RGYAILFD 386



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 4/133 (3%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITR 426
            RQ + ++    E+ +   L       K ++       + ++  +        + +L  R
Sbjct: 286 RRQEMSDRLNRFEKDLHNTLNLALTRLKSRLDRAAGSFVFKEPAHLARMRRQQLDELENR 345

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRI 485
           ++      + +    +      L +      L+RGY  + D      +T  + +A  TR+
Sbjct: 346 LQGSAERWLLANRARLDQLAGTLTTLNPSRQLERGYAILFDPAAGKPVTTSK-VAAGTRL 404

Query: 486 LINFFDGQANAIV 498
                DG+    V
Sbjct: 405 QARLADGEMTVEV 417


>gi|255321888|ref|ZP_05363038.1| exodeoxyribonuclease VII, large subunit [Campylobacter showae
           RM3277]
 gi|255300992|gb|EET80259.1| exodeoxyribonuclease VII, large subunit [Campylobacter showae
           RM3277]
          Length = 387

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E+  S+V V GEIS     H SGH YF+LKD  + I A+I+K    
Sbjct: 2   LSVSELNEQAKTLLETTFSYVEVEGEISRLV-RHGSGHWYFTLKDEKAAISAVIYKFNAA 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F   +GI+  + GKI+ +  S  YQ I   + PSG G L  A ++ K +L  EGLF 
Sbjct: 61  KLKFDVADGIKVALYGKISLYSPSGSYQFIATLIRPSGEGELELAFKQLKSRLESEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
              K P+P  P+ IA++TS T A ++D+L+  S R+ L  +I+F    QG+  P  +  A
Sbjct: 121 ISRKKPLPKFPRRIALVTSKTSAALQDMLRIASQRWALAEIIVFDSLTQGETAPASLIRA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + +             + I+LARGGGS EDLW FNDE + R I  +  P+ISA+GHE D+
Sbjct: 181 LKRAGAS-------GANAIVLARGGGSREDLWCFNDENLAREIYAARTPVISAVGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+AAD RAPTP+ A    +P    L  S+  L    +    R+ + K N L  +   
Sbjct: 234 VISDFAADFRAPTPSAAMAALLPDAGELMQSIDRLSEAADAAFTRVWERKFNALAMMRAR 293

Query: 314 LPNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
              +   Q ++     L  L + L+  ++  + +          
Sbjct: 294 FSQASLTQKIARKEQILLNLRQALDAAVQTKLLKFENALKLARA 337


>gi|253578526|ref|ZP_04855798.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850844|gb|EES78802.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 393

 Score =  270 bits (691), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 181/348 (52%), Gaps = 11/348 (3%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           L  + V+GE+S  +  H+SGH YFSLKD    ++ +++ G    + F  + G + +V G 
Sbjct: 8   LQKIYVKGEVSNCK-YHTSGHIYFSLKDETGTLNCVMFAGHRRGLAFAMKNGDKVIVGGS 66

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           +  +    +YQ+  + +   G+G L       K++L + G+F+ ++K PIP   + + V+
Sbjct: 67  VDVYERDGRYQMYAKEITLEGAGILYERYLALKQELEDMGMFAQEYKQPIPRFIRRLGVV 126

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           T+PTGA ++DI      R P L++I++P  VQG    + I   I  L+           D
Sbjct: 127 TAPTGAAVQDIRNISYRRNPYLQIILYPALVQGAGAAESIVKGIQMLDK-------TDVD 179

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           +II+ RGGGSIEDLW FN+E++ RAI   S PIISA+GHETD+T+AD+AADLRAPTP+ A
Sbjct: 180 VIIVGRGGGSIEDLWAFNEEIVARAIFECSTPIISAVGHETDFTIADFAADLRAPTPSAA 239

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRL 328
           AE+AV     +  ++     RL   +        + L          + +  L   R RL
Sbjct: 240 AELAVDDYRSVIEAVSIYRQRLYRAMSGKTDLYRSRLEHFQTKFAYLSPENRLREQRQRL 299

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
             L   +++ +   +  +    +  + R      +  + +   ++ +K
Sbjct: 300 ADLENAVQNGMNRKLQDERHRLSVYLERFAGLSPLKKLNQGYSYVADK 347



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 2/131 (1%)

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            +Q + + +           +        L    +NR+      +  L   ++  ++ K+
Sbjct: 257 YRQRLYRAMSGKTDLYRSRLEHFQTKFAYL--SPENRLREQRQRLADLENAVQNGMNRKL 314

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           +     +S+        +    L +GY+ + D     +T    +     I I+  DG   
Sbjct: 315 QDERHRLSVYLERFAGLSPLKKLNQGYSYVADKYKKTLTSVEQVQNGDTIYISVTDGTIE 374

Query: 496 AIVINKAPPKE 506
           A V      + 
Sbjct: 375 ADVTGTVKEER 385


>gi|291459866|ref|ZP_06599256.1| exodeoxyribonuclease VII, large subunit [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417656|gb|EFE91375.1| exodeoxyribonuclease VII, large subunit [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 445

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 121/378 (32%), Positives = 196/378 (51%), Gaps = 15/378 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSVSELS +L  +   +  L ++ V GEIS  +  HSSG+ +F+LKD+ S++ A+++ G 
Sbjct: 6   YSVSELSRYLSGLFSEDYLLRNLTVSGEISNLK-YHSSGNIFFTLKDSASQLSAVLFAGD 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F  E+G++ L  G+++ +     YQ+ ++S+   G G L    E+ K+KL E G 
Sbjct: 65  RAGLRFRLEDGMKVLCGGRVSVYEKGGSYQLYVKSVRSDGLGELYLLYEELKRKLAEMGF 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F   +K  +P   + I ++T+ TGA +RDI+Q    R P   + ++P KVQG+   + ++
Sbjct: 125 FDPAYKRALPRYARRIGIVTAKTGAAVRDIIQIARRRNPYAELWLYPAKVQGEGAAESVS 184

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I  L+ L         D++I+ RGGGSIEDLW FN+E +  AI ++  PIISA+GHET
Sbjct: 185 EGIETLDRL-------GLDVLIVGRGGGSIEDLWAFNEERVAEAIFHADTPIISAVGHET 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+ADY AD RAPTP+ AAE+AV         L   E+   +++   +  +  +     
Sbjct: 238 DTTIADYVADRRAPTPSAAAELAVFELSSFYEDLKQRESTFLSLMREKLLKERQSAERRE 297

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             L   + +  L   R RL     EL   ++  I R+            S ++   +   
Sbjct: 298 YRLRALSPETKLLRLRQRLMGAEEELRKQMKERIRRERTRLQAYRG--LSVWMEKRLSGE 355

Query: 370 RQHILEKQQHIEQIVKQH 387
           RQ +    + ++      
Sbjct: 356 RQRLELLTERLDAASPGR 373


>gi|319957425|ref|YP_004168688.1| exodeoxyribonuclease vii, large subunit [Nitratifractor salsuginis
           DSM 16511]
 gi|319419829|gb|ADV46939.1| exodeoxyribonuclease VII, large subunit [Nitratifractor salsuginis
           DSM 16511]
          Length = 421

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 120/422 (28%), Positives = 209/422 (49%), Gaps = 16/422 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VS L+  +K ++E+   H+ + GEI+     HSSGH YFS+KD+ S +  ++W+    +
Sbjct: 5   TVSALNEKIKSLLEATFMHIRLEGEIASVT-YHSSGHIYFSVKDDRSTLRCVMWRSNAAR 63

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F  E+G   ++ G +  +    +YQ+I  S+ P G G L  A E+ KK+L  +G F+ 
Sbjct: 64  LKFRLEKGAHVVIDGSVGVYTPRGEYQMIAVSVEPYGRGALAVAFEQLKKRLEAQGYFAA 123

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ IA++T+  GA ++D+L+    R+PL  +I+    VQG+   + IA AI
Sbjct: 124 ERKKPLPRYPRRIALVTAVGGAALQDMLKIARRRWPLTELIVVDTLVQGEGAAESIARAI 183

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +TL         DII+  RGGGS EDLW FN+E +  AI  +  P++SA+GHE D  
Sbjct: 184 AYADTL-------GADIIVTGRGGGSAEDLWAFNEEAVAEAIFQAQTPVVSAVGHEVDTL 236

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ ADLRAPTP+ A EM +P +  L  +L     RL   +  L++     L    +AL
Sbjct: 237 ISDFVADLRAPTPSAAMEMILPDQNELLRTLDERADRLRRRMRELLRSSEERLRREEEAL 296

Query: 315 PNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
             +     L  +     RL R+    +   + +       +  R   + +   + +    
Sbjct: 297 KRASILSRLQSALEEFARLRRDYREVIRYRLSQFEGELLPLQRR-CDETIRRQLARQEGR 355

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ + ++     R      +     L   R   ++    +   +    +R+   + 
Sbjct: 356 VKILEEQL-RLQNPRQRTREGWAE---VSLDGRRVPLEHLDPEMEFQLTDAQSRLRARVL 411

Query: 433 HK 434
           HK
Sbjct: 412 HK 413



 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 52/179 (29%), Gaps = 2/179 (1%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           D         +E+I+  +      +  R                   +++         L
Sbjct: 243 DLRAPTPSAAMEMILPDQNELLRTLDERADRLRRRMRELLRSSEERLRREEEALKRASIL 302

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
             +    +E   +    RE  + R+      +  L  R +  +  ++      V I    
Sbjct: 303 SRLQSALEEFARLRRDYREVIRYRLSQFEGELLPLQRRCDETIRRQLARQEGRVKILEEQ 362

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           L+    +   + G+  +   +   +    +L  +    +     +  A V++K P   +
Sbjct: 363 LRLQNPRQRTREGWAEVSL-DGRRVP-LEHLDPEMEFQLTDAQSRLRARVLHKEPLDTK 419


>gi|269926767|ref|YP_003323390.1| exodeoxyribonuclease VII, large subunit [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269790427|gb|ACZ42568.1| exodeoxyribonuclease VII, large subunit [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 402

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 120/359 (33%), Positives = 194/359 (54%), Gaps = 12/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VS+++++L+ ++E++  LS V ++GEIS      S GH YF+LKD  S++  +++K  
Sbjct: 4   LTVSDINFYLQQLLETDRLLSDVWIQGEISNL-SQSSKGHFYFTLKDGESQLSCVLFKQD 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           L  ++     G   +  G+++ +  S K Q  ++ + P G+G L    +  K KL  EGL
Sbjct: 63  LIHVQAELANGQAVIAHGRVSIWKQSGKLQFYVDIVQPEGTGRLELEFQALKAKLEAEGL 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F +  K  IP  P  I ++TS  GAV+ DIL  +  R+PL  VI+   +VQGD    +IA
Sbjct: 123 FDESRKRSIPKFPSAIGIVTSKHGAVLHDILNILRRRYPLAEVILSHTQVQGDGASLQIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI +L+         + D+IILARGGGS E+LW FN+E + RAI    +P+ISAIGHET
Sbjct: 183 AAIEKLHK------TAKVDVIILARGGGSREELWAFNEECVARAIYACPVPVISAIGHET 236

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ADY ADLRAPTP+ AAE+ VP    L+ SL ++    +  + + ++  +  +  + 
Sbjct: 237 DYTIADYVADLRAPTPSAAAELVVPNVAELRQSLDHMLNIASMNMRQKLRQCMEDVQHMH 296

Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L        +   R +L  L       +  +I  K  +   +   + +      + +
Sbjct: 297 SHLKRTSPIHAIHRHREKLSLLNDNALSRVRHLIELKKSNLETMALSLNALNPKAVLGR 355



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 2/137 (1%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           N+ + RQ +          ++Q LR    + +   + L   R    + I      +  L 
Sbjct: 262 NVAELRQSLDHMLNIASMNMRQKLRQCMEDVQHMHSHLK--RTSPIHAIHRHREKLSLLN 319

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                 + H I+   +++      L +   K  L RGY+     +   +    ++     
Sbjct: 320 DNALSRVRHLIELKKSNLETMALSLNALNPKAVLGRGYSVTTTEDGKVLRSIDDVGNTKA 379

Query: 485 ILINFFDGQANAIVINK 501
           I     DG   ++V   
Sbjct: 380 ITTRLADGFIKSMVDQT 396


>gi|21674642|ref|NP_662707.1| exodeoxyribonuclease VII large subunit [Chlorobium tepidum TLS]
 gi|31563172|sp|Q8KBF9|EX7L_CHLTE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|21647845|gb|AAM73049.1| exodeoxyribonuclease, large subunit [Chlorobium tepidum TLS]
          Length = 398

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 130/356 (36%), Positives = 204/356 (57%), Gaps = 6/356 (1%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SV EL+  +K+ +ES    V V+GE+S  +  HSSGH Y +LKD+ ++I A+IWK    +
Sbjct: 7   SVGELTRAIKNELESLFPFVRVKGELSNVK-QHSSGHVYLTLKDSEAQIPAVIWKSVRAR 65

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 +G+E +  G++  +P + +YQ+I  +L  +G G    ALE+   KL + G F  
Sbjct: 66  SPLELRDGLEVIAEGRLEVWPPAGRYQLICTALFETGEGEQRLALERLIAKLAKAGWFDA 125

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K PIP IP+ I +ITSPTGAVIRD+    + RFP   ++++PV+VQG+   + I  A+
Sbjct: 126 ERKKPIPRIPRRIGMITSPTGAVIRDMSDVFARRFPAAELLLYPVQVQGERAVESIVRAL 185

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N     +   +PD++I+ARGGGS EDL  FNDE +  AI  S+IP+ISA+GHETD +
Sbjct: 186 RYFND--PPKPEHKPDVLIVARGGGSSEDLQAFNDEAVAEAIYRSAIPVISAVGHETDLS 243

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD  ADLRA TP+ AAE AVP +E L   + NL  R + ++  LI      ++S+  + 
Sbjct: 244 VADMVADLRAGTPSIAAERAVPDREELLRLIDNLVNRQSILMEGLISGAQLQVDSITSSY 303

Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                 Q L     RL  + +E++  +   +  + +      +R+    +   +++
Sbjct: 304 AFNRPVQMLGQFEERLALMEKEMKRAIAEKVRDREQQLTAAADRLAMLDINRTLKR 359



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 3/138 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKK 422
               +R+ +L    ++       +  +    + ++  +       +    +      +  
Sbjct: 262 RAVPDREELLRLIDNLVNRQSILMEGLISGAQLQVDSITSSYAFNRPVQMLGQFEERLAL 321

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
           +   ++  ++ K++     ++     L       TLKRG+  +   ++ ++T  ++L   
Sbjct: 322 MEKEMKRAIAEKVRDREQQLTAAADRLAMLDINRTLKRGFALVT-QDDRYVTSAKSLEAD 380

Query: 483 TRILINFFDGQANAIVIN 500
            +I + F DGQ  A V  
Sbjct: 381 AKIGLTFHDGQREARVTE 398


>gi|289578290|ref|YP_003476917.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter italicus
           Ab9]
 gi|297544570|ref|YP_003676872.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|289528003|gb|ADD02355.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           italicus Ab9]
 gi|296842345|gb|ADH60861.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 406

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 143/408 (35%), Positives = 230/408 (56%), Gaps = 13/408 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      V E++ ++K +++++  L +V VRGEIS  +  HS+G  YF+LKD  + +  +
Sbjct: 1   MQLKALEVREITDYIKKMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEIASLKCV 58

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++      + F  ++G+  +V G+IT +  +  YQ+  +S+   G G L  A  K K+KL
Sbjct: 59  MFNEYGKLLNFTLQDGMSVIVTGRITVYEKNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLF    K PIP  PK IAV+TSPTGAVIRDI+     R P + +++ PV VQG   
Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISKRRNPTIDILVVPVLVQGISA 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI NA+  LN  K+       D+IILARGGGS+E++W FN+E + R I  S IP++SA
Sbjct: 179 ADEICNALRILNKRKD------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T++D+ ADLRAPTP+ AAE+ VP  +  Q  +  L+ RL  +++  +K K   
Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQREIFLLKTRLITLMMAELKRKKKE 292

Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L SL +AL   +  +     +++++ L   L   +  I  RK   F  +  ++ S   ++
Sbjct: 293 LESLRRALYFNSPIKRNEVLKHKIESLKSSLCKEMLSIYNRKKNDFLILTEKLNSLSPLN 352

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
            + +    IL+KQ+ +   VK  + Y  ++   K      + ++ K  
Sbjct: 353 VLTRGYTVILDKQEKVISSVKDIIPYEEVKILFKDGNAKAIIQEVKED 400



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 5/168 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  +  +  +++       +     I   Q+ I  +  + +  +  E K K   L 
Sbjct: 235 HETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQREIFLLKTRLITLMMAELKRKKKELE 294

Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            LR          R   L   I+ L + +   +            I T  L S +  N L
Sbjct: 295 SLRRALYFNSPIKRNEVLKHKIESLKSSLCKEMLSIYNRKKNDFLILTEKLNSLSPLNVL 354

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            RGYT I D     I+  +++     + I F DG A AI+        
Sbjct: 355 TRGYTVILDKQEKVISSVKDIIPYEEVKILFKDGNAKAIIQEVKEDAR 402


>gi|332531105|ref|ZP_08407021.1| exodeoxyribonuclease VII, large subunit [Hylemonella gracilis ATCC
           19624]
 gi|332039451|gb|EGI75861.1| exodeoxyribonuclease VII, large subunit [Hylemonella gracilis ATCC
           19624]
          Length = 444

 Score =  270 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 127/388 (32%), Positives = 202/388 (52%), Gaps = 11/388 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
           M+      S     + V  L   +   +++  + V VRGEISGY  + +SGHAYF+LKD 
Sbjct: 1   MSESVFAASTPR-IWQVGALCRAVADTLDARFNPVAVRGEISGYN-LAASGHAYFTLKDP 58

Query: 60  ---NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
              +  ++   +++   + ++F P EG +  V G+++ +      Q+I+ES+  +G+GTL
Sbjct: 59  NGRDGGQLRCAMFRRAASLLDFAPREGDQVEVRGRLSVYEARGDLQLIVESMARAGAGTL 118

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
                + K KL  EGLF    K  +P +P+ I V+TS   A +RD+   ++ R P + V 
Sbjct: 119 FEQFLRLKAKLEAEGLFDPGRKRALPRLPRGIGVVTSLGAAALRDVATALNRRAPHVPVC 178

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           I P  VQG   P E+  A+ +L  L         D+I+L RGGGSIEDLW FNDE +VR 
Sbjct: 179 IAPAAVQGGAAPGELVAALQRLYALAARGE---IDVILLVRGGGSIEDLWAFNDEQLVRT 235

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +A S +P+IS +GHETD+TLAD+ ADLRAPTPT AAE+A   + +   +L  L+ +L + 
Sbjct: 236 MARSPVPVISGVGHETDFTLADFVADLRAPTPTAAAELAAEPQANWLGALALLQKQLRDA 295

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +   +      L+  L  L      L+  R R++ L   L+H    ++    +      +
Sbjct: 296 VQDRLDVASQRLDLALGRLGRPSARLARQRLRVNGLGLSLQHAAARLLLLLRQTLQRRAD 355

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQI 383
                    ++Q  RQ +      ++ +
Sbjct: 356 AWPQMV-RRDMQLRRQRLEHAALRLQLL 382



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 49/151 (32%), Gaps = 5/151 (3%)

Query: 353 IINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             N + +  L+    ++  +  +    Q ++  + +  R      ++++ +  +      
Sbjct: 278 QANWLGALALLQKQLRDAVQDRLDVASQRLDLALGRLGRPSARLARQRLRVNGLGLSLQH 337

Query: 411 NRIFYLHTHIKKLITRIE---FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                L    + L  R +    ++   ++     +      LQ       L+RGY  + D
Sbjct: 338 AAARLLLLLRQTLQRRADAWPQMVRRDMQLRRQRLEHAALRLQLLDPSLVLQRGYAWLTD 397

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIV 498
            +   +T+         +     DG    +V
Sbjct: 398 ADGRAVTRAAQTHAGQSLHATLADGVVPVLV 428


>gi|148642061|ref|YP_001272574.1| exoribonuclease VII, large subunit, XseA [Methanobrevibacter
           smithii ATCC 35061]
 gi|148551078|gb|ABQ86206.1| exoribonuclease VII, large subunit, XseA [Methanobrevibacter
           smithii ATCC 35061]
          Length = 527

 Score =  270 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 133/515 (25%), Positives = 225/515 (43%), Gaps = 59/515 (11%)

Query: 11  DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           ++  YS+S ++  +   +    +   + +RGEI+ + G ++SGH YFSLKD +S I  ++
Sbjct: 3   ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K +   ++F P+ G++ +  G+++ +      Q  +  +  +G G L  A EK KKKL 
Sbjct: 63  FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF D+    IP  PK I VITS +G  ++DI+  I  R+P  +I++   VQG    +
Sbjct: 123 KEGLFKDKKV--IPQYPKKIGVITSASGKAVKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I   N           D+II+ RGGGS +DLW FN E IVR+IANS  P+I+AIG
Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306
           H TD TL+D  +D  A TPT AAE+ VP K  L   L N+E RLN++I   +        
Sbjct: 234 HSTDKTLSDMVSDKVAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           ++   K L +        +  L  L    E +L  +I       ++  N    +   + +
Sbjct: 294 ISKNNKTLKDPLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL------------------------ 402
            K    I   +  ++  +   L     +       L                        
Sbjct: 354 NKKVGKITLFKNELDNNMSNCLLEYENKLNLHFKNLKSMNFIESFELKKNSLNLIENNLN 413

Query: 403 -------------------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                              + +       +      + ++   ++  ++  + S    + 
Sbjct: 414 NSINVTLNSHIHDLEIIKNNHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLR 473

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
           I    L+       L++GY  ++D +   I + + 
Sbjct: 474 ILEEKLKILNPDELLEKGY-VVKDPDE--IRKSKA 505


>gi|312134818|ref|YP_004002156.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor
           owensensis OL]
 gi|311774869|gb|ADQ04356.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           owensensis OL]
          Length = 454

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 136/499 (27%), Positives = 214/499 (42%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +LK  VE +  L ++ +RGE+   R   S  H YF LKD    +
Sbjct: 4   NNIVPKKEWSVYELTSYLKKKVEMDVLLKNIYLRGEV--IRPSISGDHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           +I  + +    +      + G + LV G +  +      ++ +  +   G G L   L++
Sbjct: 62  KIKCVFFWFDKS---LEIKHGTKVLVKGNVIFYEKEGVIELKVNEITDIGLGELFIKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            +++L +EGLF  ++K  IP  PK I ++TS  GA IRDIL  I  RF  ++V I+   V
Sbjct: 119 LEERLRQEGLFDSKYKKEIPRYPKKIGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   NT +        ++II+ RGGGS EDL  FN EM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNTSEP------VEVIIVGRGGGSFEDLMAFNSEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V  ++     L   + RL N I +L+ 
Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVNFQKQALEKLSEFQKRLKNAIEKLLN 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
              N +  L   L       T++     +D    +L   +   +   +R+      R+  
Sbjct: 293 LSNNKIEILRYKLYQNSPANTIAKCIQDVDLCRHKLSFAVNKKLHEIHRNLKSFEKRLAD 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 +   R +     + +E+  K+ L+      K  +  L                 
Sbjct: 353 RNPELRLSVIRTNFDNCSRRLEEAFKKVLQQKEFVYKVNLEKLI---------------- 396

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                          +    N LKRGY+     N+  +T    +
Sbjct: 397 -------------------------------ALNPLNVLKRGYSITLH-NSRILTTISQI 424

Query: 480 ATKTRILINFFDGQANAIV 498
           +    I+    DG   + V
Sbjct: 425 SNGDEIITRLSDGIIKSRV 443


>gi|251773176|gb|EES53729.1| exodeoxyribonuclease VII, large subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 503

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/501 (22%), Positives = 220/501 (43%), Gaps = 14/501 (2%)

Query: 14  EYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            Y+V+EL+  ++  ++      V + GE+S  +    SGH YFS++D  + +  ++++  
Sbjct: 12  VYTVAELAGSVRQGIDRLFPGPVSLTGELSNVKLSQPSGHYYFSIRDAVASLRGVMFRSA 71

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              + F P EG++ L+ G+++ +    + QI+++ + P+G G       + +  L +EG 
Sbjct: 72  ARSLSFQPAEGLKVLLRGRLSYYEARGEVQIVVDRMGPAGLGLFFQEFARVRDLLAKEGA 131

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
            S + K PIP  P+ +A+ITSP GA + D L+    +   + V++ P +VQG E   ++ 
Sbjct: 132 LSPERKRPIPVFPRKVALITSPQGAAVWDFLRICDQQNRLVPVVVIPARVQGFEAATDLL 191

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A  ++  L      P  D+++L RGGGS EDL  +N E + RAI    +P+++AIGHE 
Sbjct: 192 RAFSEVPHL------PGVDVVVLTRGGGSAEDLMVYNREDVARAILACPVPVVTAIGHEV 245

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D ++AD  ADLR  TPT AA+        L  + I    R+       ++ +   L +  
Sbjct: 246 DVSVADLVADLRVATPTEAAKRVFFDGAQLMETAILSRRRILGAFSSRLREEQGRLRAFR 305

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +   +  + +S     L R    L   ++  + R       +  R+        I +  +
Sbjct: 306 EGAGHLSRRISRLHLALVRGQEGLSQLIQGKVGRLSGDLRDLAGRLV--HPSSQIIRQGR 363

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E+  ++ ++       +  E+   +   H L       +  L     +L   +   +
Sbjct: 364 RLSERAGYLVRLFLAR---LSSERTAMLGFQHRLDRPDPIGVGILRERHARLKNGLALAM 420

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILINFF 490
            +++     +  I    L S      L  G+  + +  +   +T     +    +L    
Sbjct: 421 GNRLSREDRTFVILRSGLFSHDPGRPLASGFFLLSRPESGTLVTASNPPSVGDTLLGKTR 480

Query: 491 DGQANAIVINKAPPKEQPTKK 511
               +  VI+     E+   +
Sbjct: 481 HLSLSLKVIDVRAESEEKNGR 501


>gi|319941959|ref|ZP_08016280.1| exodeoxyribonuclease VII large subunit [Sutterella wadsworthensis
           3_1_45B]
 gi|319804612|gb|EFW01482.1| exodeoxyribonuclease VII large subunit [Sutterella wadsworthensis
           3_1_45B]
          Length = 506

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 121/502 (24%), Positives = 208/502 (41%), Gaps = 27/502 (5%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           S     + + +E  L  + + GE++    + S GH YFSLKD  + +   +++  L +  
Sbjct: 2   SAALRRMTNALEGVLDGIWITGEVAEV-SLSSLGHLYFSLKDEVALLSCAMFRSALGRGP 60

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137
              ++G    ++G++  +    + Q++     P+G G+L  A  K K KL  EGLF+ + 
Sbjct: 61  I-FQKGDRIELLGRVDIYAPRGRLQMVGTRWRPAGVGSLYEAFLKLKAKLEAEGLFAPER 119

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196
           K PIP   + +A++TS   A   D+L+ +  R P ++++     VQG + P  + +A++ 
Sbjct: 120 KKPIPRFVRRVALVTSAQAAAYGDVLRTLERRTPWVKIMHVDSLVQGADAPASLISALIA 179

Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256
              L        PD+I+L RGGGS EDL  FNDE + R IA  S+P+I  +GHE D+T+A
Sbjct: 180 AQALT-------PDVILLVRGGGSYEDLQAFNDEELARTIAALSVPVICGVGHEADFTIA 232

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D+AADLRA TPT AAE   P ++     L      L     R  ++     +S    LP 
Sbjct: 233 DFAADLRASTPTAAAESIGPDRDAWLRRLDKCADMLERAAERAYQHAAQRFDSAAAHLPA 292

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-----FNHIINRIKSDFLIHNIQKNRQ 371
            D+ L      +      L +  +  +    R                      +++  +
Sbjct: 293 EDRLLQPWEQAMINARVRLCNAAQGRLADAERAAEGAGLRWRTAADFITPRQIRLERAAR 352

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E    +   V+         ++  +A       + + +   L       +      L
Sbjct: 353 FLAEPDLCLRAPVQHLTAAAERFRRLGLAAEERRGTEVERQTKALSFFAHHALEAAAARL 412

Query: 432 S----------HKIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLA 480
                       +I +    V +    L        L+ GY   + D +   ++    L 
Sbjct: 413 DRALRLRPDPMREINAAQRRVELAANALSLADPNRPLRAGYARIVTDAD-LVVSHAAELR 471

Query: 481 TKTRILINFFDGQANAIVINKA 502
             + + I F DG A A V    
Sbjct: 472 RGSAVRILFADGFAAAEVQEIT 493


>gi|154173884|ref|YP_001408869.1| exodeoxyribonuclease VII large subunit [Campylobacter curvus
           525.92]
 gi|112803710|gb|EAU01054.1| exodeoxyribonuclease VII, large subunit [Campylobacter curvus
           525.92]
          Length = 387

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/302 (37%), Positives = 175/302 (57%), Gaps = 9/302 (2%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E+   +V V+GEIS     HSSGH YF+LKD  + I A++++    
Sbjct: 2   LSVSELNEQAKSLLETTFDYVEVKGEISRLT-KHSSGHWYFTLKDEKAAISAVMYRMNNA 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F   + ++ ++ GK + +  S  YQ++  +L P G G L  A  + K++L  EGLF 
Sbjct: 61  KLKFDMTDAMKVVIYGKASLYTPSGSYQLVATTLRPDGEGELELAFRQLKERLEREGLFE 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
             HK PIP +PK IA++TS T A ++D+L+ +S R+ L +++IF    QG+  P  +  A
Sbjct: 121 ISHKKPIPRLPKRIALVTSSTSAALQDMLKVVSTRWKLSKILIFDAFTQGENAPSSLIRA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + +           D+I+LARGGGS EDLW FNDE + RAI +++ P++SAIGHE D+
Sbjct: 181 LKKADLS-------GADVIVLARGGGSREDLWCFNDEGLARAIYDAATPVVSAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RA TP+ A    +P  E     +  LE  L  +I   +  K + L  L   
Sbjct: 234 VISDFVADRRALTPSAAMLDILPDSEAFLQYIDKLEDELRGVIGLKLANKKSRLEILASK 293

Query: 314 LP 315
             
Sbjct: 294 FS 295


>gi|331082308|ref|ZP_08331434.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400794|gb|EGG80395.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 403

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 119/371 (32%), Positives = 201/371 (54%), Gaps = 13/371 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  YSV +++ ++K++ + +   + V ++GE+S  +  H+SGH YFSLKD    +  +++
Sbjct: 2   NSIYSVGQVNNYIKNMFQQDFLLNKVSIKGEVSNCK-YHTSGHIYFSLKDETGALACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F  + G + +V G ++ +    KYQ+  + +   G+G L       K +L E
Sbjct: 61  AGQRKGLAFPMKNGDKVVVSGSVSVYERDGKYQLYAKEITLEGAGLLYERFLALKAELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIP   K + ++T+PTGA I+DI      R P +++I++P  VQGD   +
Sbjct: 121 MGMFAKEYKQPIPAYAKTVGIVTAPTGAAIQDIRNVAGRRNPYVQLILYPALVQGDGAKE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I +L+           D++++ RGGGS+EDLW FN+E + RAI N   PIISA+G
Sbjct: 181 SIIEGIEKLDA-------YGVDVMLVGRGGGSVEDLWAFNEEEVARAIFNCKTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+AV     +  SL N   +L+  +   I+     + 
Sbjct: 234 HETDTTIADFVADLRAPTPSAAAELAVADIRGVFQSLENYRQKLSRNLENKIQLLQQQIK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                L   + +  +   R RL  L   ++  +E  +F   ++ N  I R+K    +  +
Sbjct: 294 YYENRLLYGSPEFQIREKRTRLLDLESRIQSAMEGQLFHARQNLNIYIERMKGLSPLEKL 353

Query: 367 QKNRQHILEKQ 377
            +   ++  KQ
Sbjct: 354 NQGFSYVENKQ 364



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 53/136 (38%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +   +Q + + ++  ++ +  + K     L  L    + +I    T +  L +RI+  
Sbjct: 268 QSLENYRQKLSRNLENKIQLLQQQIKYYENRL--LYGSPEFQIREKRTRLLDLESRIQSA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  ++     +++I    ++  +    L +G++ +++     +T    +     + I   
Sbjct: 326 MEGQLFHARQNLNIYIERMKGLSPLEKLNQGFSYVENKQGCAVTSISQVKVGEELKIQVT 385

Query: 491 DGQANAIVINKAPPKE 506
           DG     V +    K 
Sbjct: 386 DGTIITKVTDVKKEKR 401


>gi|56417297|ref|YP_154371.1| exodeoxyribonuclease large subunit [Anaplasma marginale str. St.
           Maries]
 gi|81821242|sp|Q5P9B4|EX7L_ANAMM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|56388529|gb|AAV87116.1| exodeoxyribonuclease large subunit [Anaplasma marginale str. St.
           Maries]
          Length = 397

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 146/364 (40%), Positives = 223/364 (61%), Gaps = 11/364 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  S    +  PE++V+E++  ++ ++      + +RGEISG     SSGH Y SLKD+
Sbjct: 1   MSLRSCSTEM-IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           +S I A+ W GT  +++   E G+E +  G ++T+   S+YQ++IE ++ +G G L   L
Sbjct: 59  NSVISAVCWNGT--RLDVQFENGLEVICTGHLSTY--QSRYQLVIEGMVLAGQGKLAAML 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+R+KKL +EGLF    K P+P +P  I VITSPTGAVIRDIL R+  RFP  +I++PV+
Sbjct: 115 EERRKKLEKEGLFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQ 174

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +    +  AIL  N L+E      PD+II+ARGGGSIEDLW FNDE + R  A S 
Sbjct: 175 VQGSQASAMVVQAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTTAASK 229

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPI+SAIGHETD+T+ DYAAD+RAPTPT A E+ +P ++ L S + +  +++ + +  ++
Sbjct: 230 IPIVSAIGHETDFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVL 289

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             K + L  L   L  +   +S           ++E   ++ + +K ++ +++I RI   
Sbjct: 290 GAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRY 349

Query: 361 FLIH 364
              H
Sbjct: 350 NKEH 353



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 53/130 (40%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ ++    H    ++  +R +   K+ ++  L+ +  +TK++I  +         +IE
Sbjct: 266 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 325

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F+    +      +      +  +  ++ +  GY  I D     ++    +A    I+I 
Sbjct: 326 FLFKVALLKKQQYLDNLIGRIDRYNKEHIISVGYAVIYDNTGQHVSSANAVAPDDTIVIE 385

Query: 489 FFDGQANAIV 498
           + DG+  A +
Sbjct: 386 WKDGKRRAAI 395


>gi|260222817|emb|CBA32764.1| Exodeoxyribonuclease 7 large subunit [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 456

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 9/383 (2%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
               N L    + V  L   L   + +  + V V GE+SG+    +SGH YFSLKD  ++
Sbjct: 25  MEDANPLRR-VWRVDALCRALADTLNARFNPVRVTGELSGF-SRAASGHCYFSLKDQDAQ 82

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I   ++K     ++F P +G    V G++  +      Q+I+ES+   G GTL     + 
Sbjct: 83  IRCAMFKRAATNLDFAPRDGELVEVSGRLDIYGPRGDLQLIVESMRRQGQGTLFEEFVRL 142

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L  +GLF    K P+P +P+ I ++TS   A + D+   +  R P + V + P  VQ
Sbjct: 143 KARLEAQGLFDPARKRPLPAMPRSIGLVTSLGAAALHDVATTLRRRVPHIPVFLAPAAVQ 202

Query: 183 GDECPKEIANAILQLNTL--KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           GD  P E+  ++  L +            D+I+L RGGGS+EDLW FNDE +   I+ S 
Sbjct: 203 GDAAPGELVQSLQALMSRAVDVDGRGTPLDVILLVRGGGSMEDLWAFNDEQLALTISGSP 262

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P++S +GHETD+T+AD+ AD+RAPTPT AAE+        +++   L  RL +   R++
Sbjct: 263 VPVVSGVGHETDFTIADFVADVRAPTPTAAAELVATPGAVCEAAADLLMDRLVSATHRVL 322

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             +   L+ +          ++    RL  L   L   L   +  +      +  ++   
Sbjct: 323 DTQSQRLDRVAARAGRPSGLVAAHAMRLQSLGHGLRSALFAKVRAESARGQALGLKL--- 379

Query: 361 FLIHNIQKNRQHILEKQQHIEQI 383
                   +R      Q+   ++
Sbjct: 380 -PSVRQAWSRGQAERLQRAELRL 401



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 3/138 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLR---YIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
             +    + +  + Q ++++  +  R    +        ++ H LR     ++       
Sbjct: 313 RLVSATHRVLDTQSQRLDRVAARAGRPSGLVAAHAMRLQSLGHGLRSALFAKVRAESARG 372

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           + L  ++  +     +     +      L        LKRGY  + D     +T  + L 
Sbjct: 373 QALGLKLPSVRQAWSRGQAERLQRAELRLGLLDPSLVLKRGYAWLTDKQGVAVTGVKKLE 432

Query: 481 TKTRILINFFDGQANAIV 498
              ++     DG  +  V
Sbjct: 433 PGEQVHATLSDGTVDLSV 450


>gi|222475661|ref|YP_002564078.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str.
           Florida]
 gi|255003653|ref|ZP_05278617.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str.
           Puerto Rico]
 gi|254783686|sp|B9KHB8|EX7L_ANAMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|222419799|gb|ACM49822.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str.
           Florida]
          Length = 397

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 147/364 (40%), Positives = 223/364 (61%), Gaps = 11/364 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+  S    +  PE++V+E++  ++ ++      + +RGEISG     SSGH Y SLKD+
Sbjct: 1   MSLRSCSTEM-IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDD 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           +S I A+ W GT  +++   E G+E +  G I+T+   S+YQ++IE ++ +G G L   L
Sbjct: 59  NSVISAVCWHGT--RLDVQFENGLEVICTGHISTY--QSRYQLVIEGMVLAGQGKLAAML 114

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E+R+KKL +EGLF    K P+P +P  I VITSPTGAVIRDIL R+  RFP  +I++PV+
Sbjct: 115 EERRKKLEKEGLFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQ 174

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +    +  AIL  N L+E      PD+II+ARGGGSIEDLW FNDE + R  A S 
Sbjct: 175 VQGSQASAMVVQAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTAAASK 229

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPI+SAIGHETD+T+ DYAAD+RAPTPT A E+ +P ++ L S + +  +++ + +  ++
Sbjct: 230 IPIVSAIGHETDFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVL 289

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             K + L  L   L  +   +S           ++E   ++ + +K ++ +++I RI   
Sbjct: 290 GAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRY 349

Query: 361 FLIH 364
              H
Sbjct: 350 NKEH 353



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 53/130 (40%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ ++    H    ++  +R +   K+ ++  L+ +  +TK++I  +         +IE
Sbjct: 266 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 325

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F+    +      +      +  +  ++ +  GY  I D     ++    +A    I+I 
Sbjct: 326 FLFKVALLKKQQYLDNLIGRIDRYNKEHIISVGYAVIYDNTGQHVSSANAVAPDDTIVIE 385

Query: 489 FFDGQANAIV 498
           + DG+  A +
Sbjct: 386 WKDGKRRAAI 395


>gi|158604940|gb|ABW74757.1| exodeoxyribonuclease VII, large subunit [Campylobacter concisus
           13826]
          Length = 388

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 119/332 (35%), Positives = 183/332 (55%), Gaps = 11/332 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVSEL+   K ++E+ L +V V GEIS     H+SGH YF+LKD  S I A++++    
Sbjct: 2   LSVSELNEKAKALLEATLDYVEVSGEISRLT-KHASGHWYFTLKDEKSSISAVMYRMNNQ 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++FLP+EG++  + GK+T +  S  YQ++  +++P G G L  A  + K+KL  EGLF 
Sbjct: 61  KVKFLPKEGLKVKIYGKVTIYSPSGSYQLVASAMLPDGEGELELAFRQLKEKLENEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
              K  IP +PK IA++TS T A ++D+L+ +  R+ L  + IF    QG+  P  +  +
Sbjct: 121 ISAKKEIPNLPKKIALVTSATSAALQDMLKVVKSRWRLSEIYIFDALTQGESAPSSLIKS 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + +           D+I+LARGGGS EDLW FNDE + R I  +  P+ISAIGHE D+
Sbjct: 181 LRRADK-------YGVDVIVLARGGGSKEDLWCFNDEGLAREIYATKTPVISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD R+ TP+ A    +P +E     L  L   L++ +   I  K N LN LL  
Sbjct: 234 VISDFVADRRSLTPSAAMLDLLPDEEAFFQYLDRLSDDLDSALNLKITKKQNLLNLLLSK 293

Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIII 343
             +      +      +      L + ++  I
Sbjct: 294 FSSNALKARIELKFSEVANKQNALTNAVQRKI 325


>gi|300814950|ref|ZP_07095178.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300510920|gb|EFK38192.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 534

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 143/534 (26%), Positives = 238/534 (44%), Gaps = 61/534 (11%)

Query: 17  VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V EL+ +LK IV  +   S++ V GEIS ++  H +G+ YFSLKD+ SRI+AII+     
Sbjct: 6   VKELNSYLKKIVSMDFLLSNIAVEGEISNFKA-HENGNLYFSLKDDFSRINAIIFYKNAI 64

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F  E+G++ +  G +  +   S+  + I  +I   SG L     + KKKL +EGLF 
Sbjct: 65  NLDFKMEDGLKIIAKGSVNYYEKDSQITLYISEIISHSSGNLYAEFVRLKKKLSKEGLFD 124

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
             HK  IP  PK I +ITS +GA ++DI+  +  R  L  +IIFP  VQGD+ P ++   
Sbjct: 125 PGHKLKIPTFPKTIGIITSASGAAVKDIVNMLKMRNNLANIIIFPSLVQGDDAPSDLIEG 184

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N  ++       D+IIL RGGGS EDL+ FNDE + +AI NS+IPIISA+GHE D+
Sbjct: 185 IKYFNDRED------IDLIILGRGGGSFEDLFCFNDENLAKAIYNSNIPIISAVGHEVDY 238

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           +++D+ AD+RA TPT AAE+A+  K+ L  +L +    LN+ + ++I      L +    
Sbjct: 239 SISDFVADMRAATPTKAAEIAIISKKELSENLKSNYELLNSSLNKIIFDMREKLANYGNL 298

Query: 314 LPNSDQT------LSCSRYRLDRLPRELEHNLEII----------IFRKYRHFNHIINRI 357
           L                + R +RL   L+ ++             I             +
Sbjct: 299 LRIFCPLKDILVNKDNLKDRFNRLNISLKSSVFNNQKILEYGVKSIKSYDFKIEERKVYL 358

Query: 358 KSDFLI------HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--------- 402
           +   L         I      +    + +   + Q LR   +  K     L         
Sbjct: 359 EDKKLTLVSGLSQKINIETNKLNYYYKLLNYNMFQLLRSNSISLKNFKYYLKTYKVSDEI 418

Query: 403 ---HMLREQTKNRIFYLHTHIKKLITR---------IEFILSHKIKSCHTSVSITTRILQ 450
              ++     ++R+  +         +         +  +  + IK+    ++     L 
Sbjct: 419 LKKNLYLHALESRLKVMDFKTDFRYKKDYLYNKKYILNNLTLNIIKNERNKLNTLIYNLN 478

Query: 451 SF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +               +   + + +   R +     + I+  +G A A + +  
Sbjct: 479 TLYNDINKV------KVYLKDGSLLKDIRQINEGDFLNIHLKNGVAKAQIKDIE 526


>gi|224437774|ref|ZP_03658721.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG
           18818]
 gi|313144220|ref|ZP_07806413.1| exodeoxyribonuclease 7 large subunit [Helicobacter cinaedi CCUG
           18818]
 gi|313129251|gb|EFR46868.1| exodeoxyribonuclease 7 large subunit [Helicobacter cinaedi CCUG
           18818]
          Length = 417

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 186/373 (49%), Gaps = 7/373 (1%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           VSEL+  +K I+E     VCV+GEIS  +  H+SGH Y S+KD  S I  +++KG    +
Sbjct: 6   VSELNTQIKAILEQTFLDVCVQGEISSVKV-HTSGHIYLSIKDEDSNIKCVMFKGNARGL 64

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
           +   E G   +++G ++ +    +YQI+ +S+  +G G    A E  K KL  +G F   
Sbjct: 65  KITLEVGQSIVIMGSVSVYTQKGEYQILCKSITLAGVGEFALAFENLKNKLQTKGYFESF 124

Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195
           HK P+P  PK IA++TS TGA   D+L+    R+  + + +F   VQG+   + I   + 
Sbjct: 125 HKKPMPKFPKRIALLTSATGAAKEDMLKVAQKRWNLVHITLFDTLVQGENAKECIVANLA 184

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255
             ++     T    D+I+L RGGGS+ED+W FN+E +  AI  +  PIISA+GHE D  +
Sbjct: 185 LADSFF--GTKEGFDVIVLGRGGGSMEDMWAFNEECVAEAIYRAKTPIISAVGHEVDVFI 242

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA-- 313
           +D+ ADLRAPTP+ A EM +P K      +  + +  +++  R +  K   +  L +   
Sbjct: 243 SDFVADLRAPTPSAAMEMLLPDKFEFLRIIDEMMSAYSSVFERYLGQKQRLIGQLKEYFK 302

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L N        R ++  L +    N   I+ +K      +   +        +   +   
Sbjct: 303 LYNFQSQYINKREQIQALGQIFVENFRNILEKKQGEIERV-KMLIDVAFERKLTHAQMEC 361

Query: 374 LEKQQHIEQIVKQ 386
               + ++    +
Sbjct: 362 ERLFEALKASNPR 374



 Score = 40.9 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 57/160 (35%), Gaps = 4/160 (2%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHILEKQQHIEQIVKQH 387
           D         +E+++  K+     I   + +   +       +Q ++ + +   ++    
Sbjct: 248 DLRAPTPSAAMEMLLPDKFEFLRIIDEMMSAYSSVFERYLGQKQRLIGQLKEYFKLYNFQ 307

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
            +YI  ++++  A+  +  E  +N +      I+++   I+     K+            
Sbjct: 308 SQYI-NKREQIQALGQIFVENFRNILEKKQGEIERVKMLIDVAFERKLTHAQMECERLFE 366

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
            L++   ++  K GY  I       +   +++A      +
Sbjct: 367 ALKASNPRSLCKNGYAQISKEQKVCV--LQDIAVNEVFEL 404


>gi|323143959|ref|ZP_08078615.1| exodeoxyribonuclease VII, large subunit [Succinatimonas hippei YIT
           12066]
 gi|322416260|gb|EFY06938.1| exodeoxyribonuclease VII, large subunit [Succinatimonas hippei YIT
           12066]
          Length = 489

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 129/492 (26%), Positives = 220/492 (44%), Gaps = 42/492 (8%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS       + +  N     V GEIS  +      H YF LKD  + +D +++   LN+
Sbjct: 33  SVSRFVSVTNNAL-QNFGQAVVIGEISEIKTYS---HLYFKLKDETAAVDCLMFASVLNR 88

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F+P+ G++ +V+GK + +  + ++++I++ +  +G+G ++  L   K+KL +EG+F+ 
Sbjct: 89  LSFIPKIGMKVVVVGKSSIYLKTGQFKLIVDKMFVAGAGKIMEELLALKEKLNKEGVFAA 148

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             + PIP     + +ITS  G V+ D+L  ++ R P + V+++P +VQG E P  I    
Sbjct: 149 IKR-PIPKWINKVGIITSKEGHVLHDMLTVLNKRNPGIEVVVYPCQVQGSEAPATIV--- 204

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N L    +    D++I+ RGGGS EDL  F+DE +VR I NS +PIISA+GHE D  
Sbjct: 205 ---NALNTAFSDNVCDVLIVGRGGGSFEDLMPFSDETVVRTIINSPMPIISAVGHEPDVA 261

Query: 255 LADYAADLRAPTPTGAAEMA-VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           L+D+AAD+RAPTPT AA++      E +Q  L +    L ++I + I      L      
Sbjct: 262 LSDFAADMRAPTPTAAADIVSSYTVEMMQKDLDSYALLLGDLIYKKIDDLTVVLEKAEIK 321

Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L +   +  L+     L+ L  +    +   +       +  ++R+++      +     
Sbjct: 322 LKSFGPESLLNLKSSYLNSLNEKFARLIFDKLAFCKAQNDSFLHRLQAHDPKFKLNSLDL 381

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI- 430
            + E ++ IE  V  +                         I     HI  L+  +E   
Sbjct: 382 AVNEFEKRIEFTVNDN-------------------------IAKTAKHIDNLLLLMERAP 416

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               +      +      L S      LKRGY+   D   +       L     +     
Sbjct: 417 FHQDMIDADKKIETLKEKLISLNPLLVLKRGYSVTLDKKGS-CANINTLKINDELKTLVA 475

Query: 491 DGQANAIVINKA 502
            GQ  ++V    
Sbjct: 476 GGQVLSVVTGIE 487


>gi|124486100|ref|YP_001030716.1| exodeoxyribonuclease VII large subunit [Methanocorpusculum
           labreanum Z]
 gi|124363641|gb|ABN07449.1| Exodeoxyribonuclease VII large subunit [Methanocorpusculum
           labreanum Z]
          Length = 458

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 133/496 (26%), Positives = 218/496 (43%), Gaps = 86/496 (17%)

Query: 15  YSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLK---DNHSRIDAIIWK 70
            SVSEL+  ++ +V+   L+ + VRGEI+GYR  ++SGH YFSL    DN + I  ++WK
Sbjct: 41  LSVSELAKRIREVVDCPLLTDIIVRGEITGYR-PNASGHLYFSLTEQGDNPASISCVMWK 99

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS--GSGTLLTALEKRKKKLL 128
            ++  + F  ++G+     G +  +P   + Q II+ + P+  G   L    E+ +K+L 
Sbjct: 100 YSVKNLPFSVKDGLLVQATGLVDFYPAGGRLQFIIKKMEPAVSGKAGLYLLKEQWRKELE 159

Query: 129 EEGLFSDQHKNPIPF--IPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186
            +G+              P+ I V+TS TG+V++DI   IS R+PL +++    VQGD  
Sbjct: 160 AKGIIPRPQAEMRDPPLFPRNIGVVTSKTGSVLQDIKNVISRRYPLPILLAGTSVQGDGA 219

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I  AI  L          + D+II+ARGGGS EDL+ FN   +V AI NS++PIISA
Sbjct: 220 EVGIVAAIRSL--------QDKADVIIIARGGGSFEDLFVFNHPDVVTAIRNSTVPIISA 271

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD TL+D+AAD R PTP+ AAE  V                               
Sbjct: 272 VGHETDTTLSDFAADRRVPTPSAAAETVV------------------------------- 300

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                      D+++   +   DR       +   ++  + +H   +  R++ + L   +
Sbjct: 301 ----------PDRSVLLEKLEKDRRSIHDRMSW--LLSVEQKHVADLKIRVEPNRLTRKL 348

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +   Q   E ++ I +                             R+   H         
Sbjct: 349 ELMHQQTAELEERIRRACL-------------------------RRLSVEHEACSAWSVM 383

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           I+  + +KI +    +     I+        L+RGY  +       +   +N+A   R+ 
Sbjct: 384 IQKGVKNKITTARLVLLAQKEIILGRDPYKPLERGYALVW-KEGTLVRSVKNIAKDDRLS 442

Query: 487 INFFDGQANAIVINKA 502
           +   DG+  +IV +  
Sbjct: 443 LKLADGEITSIVESIK 458


>gi|254995462|ref|ZP_05277652.1| exodeoxyribonuclease large subunit [Anaplasma marginale str.
           Mississippi]
          Length = 388

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 219/353 (62%), Gaps = 10/353 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            PE++V+E++  ++ ++      + +RGEISG     SSGH Y SLKD++S I A+ W G
Sbjct: 2   IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDDNSVISAVCWNG 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           T  +++   E G+E +  G I+T+   S+YQ++IE ++ +G G L   LE+R+KKL +EG
Sbjct: 61  T--RLDVQFENGLEVICTGHISTY--QSRYQLVIEGMVLAGQGKLAAMLEERRKKLEKEG 116

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF    K P+P +P  I VITSPTGAVIRDIL R+  RFP  +I++PV+VQG +    + 
Sbjct: 117 LFDQTRKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQVQGSQASAMVV 176

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AIL  N L+E      PD+II+ARGGGSIEDLW FNDE + R  A S IPI+SAIGHET
Sbjct: 177 QAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTAAASKIPIVSAIGHET 231

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ DYAAD+RAPTPT A E+ +P ++ L S + +  +++ + +  ++  K + L  L 
Sbjct: 232 DFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLY 291

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  +   +S           ++E   ++ + +K ++ +++I RI      H
Sbjct: 292 GVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRYNKEH 344



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 53/130 (40%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ ++    H    ++  +R +   K+ ++  L+ +  +TK++I  +         +IE
Sbjct: 257 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 316

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F+    +      +      +  +  ++ L  GY  I D     ++    +A    I+I 
Sbjct: 317 FLFKVALLKKQQYLDNLIGRIDRYNKEHILSVGYAVIYDNTGQHVSSANAVAPDDTIVIE 376

Query: 489 FFDGQANAIV 498
           + DG+  A +
Sbjct: 377 WKDGKRRAAI 386


>gi|282882007|ref|ZP_06290648.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus lacrimalis
           315-B]
 gi|281298037|gb|EFA90492.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus lacrimalis
           315-B]
          Length = 534

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 144/536 (26%), Positives = 250/536 (46%), Gaps = 65/536 (12%)

Query: 17  VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V EL+ +LK IV  +   S++ V GEIS ++  H +G+ YFSLKD+ SRI+AII+     
Sbjct: 6   VKELNSYLKKIVSMDFLLSNIAVEGEISNFKA-HENGNLYFSLKDDFSRINAIIFYKNAI 64

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            ++F  E+G++ +  G +  +   S+  + I  +I   SG L     + KKKL  EGLF 
Sbjct: 65  NLDFKMEDGLKIIAKGSVNYYEKDSQITLYISEIISHSSGNLYAEFVRLKKKLSNEGLFD 124

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
             HK  IP  PK I +ITS +GA ++DI+  +  R  L  +IIFP  VQG+  P ++   
Sbjct: 125 PGHKLKIPTFPKTIGIITSASGAAVKDIVNMLKMRNNLANIIIFPSLVQGEGAPSDLIEG 184

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N  ++       D+IIL RGGGS EDL+ FNDE + +AI NS+IPIISA+GHE D+
Sbjct: 185 IKYFNDRED------IDLIILGRGGGSFEDLFCFNDENLAKAIYNSNIPIISAVGHEVDY 238

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           +++D+ AD+RA TPT AAE+A+  K+ L  +L +    LN+ + ++I      L++    
Sbjct: 239 SISDFVADMRAATPTKAAEIAIISKKELSDNLKSDYELLNSSLNKIIFDMREKLSNYGNL 298

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L      +++  ++  L      L  +L+  +F   +   + +  IKS      I++ + 
Sbjct: 299 LRIFCPLKSILVNKDNLKDRFNRLNISLKSSVFNNQKILEYGVKSIKSYD--FKIEERKV 356

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--------------------KN 411
           ++ +K+  +   + Q +     +      +L+    Q                      +
Sbjct: 357 YLEDKKLTLVSGLSQKINIETNKLNYYYKLLNYNMFQLLKSSSISLKNFKYYLKNYKVSD 416

Query: 412 RIFYLHTHIKKLITR-----------------------IEFILSHKIKSCHTSVSITTRI 448
            I   + +++ L +R                       +  +  + IK+    ++     
Sbjct: 417 EILKKNLYLQALESRFKAMDFKTDFRYKKDYLYNKKYILNNLSLNIIKNERNKLNTLIYN 476

Query: 449 LQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           L +               +   + + +   R +     + I+  +G A A + +  
Sbjct: 477 LNTLYNDINKV------KVFLKDGSLLKDIRQINEGDFLNIHLKNGVAKAQIKDIE 526


>gi|153810476|ref|ZP_01963144.1| hypothetical protein RUMOBE_00857 [Ruminococcus obeum ATCC 29174]
 gi|149833655|gb|EDM88736.1| hypothetical protein RUMOBE_00857 [Ruminococcus obeum ATCC 29174]
          Length = 387

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 11/349 (3%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           L  + V+GE+S  +  H+SGH YFSLKD    +  +++ G    + F  ++G   +V G 
Sbjct: 8   LQKIYVKGEVSNCK-YHTSGHIYFSLKDETGVLSCVMFAGHRRGLAFRMKDGDRVVVGGA 66

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           +  +    +YQ+  + +   G+G L       K +L E G+F+ ++K PIP     + V+
Sbjct: 67  VDVYERDGRYQLYAKEISLEGAGALYERFLALKTELEEMGMFAQEYKQPIPAFIHRLGVV 126

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           T+PTGA ++DI      R P L++I++P  VQG+     I   I  L+           D
Sbjct: 127 TAPTGAAVQDIRNISLRRDPYLQIILYPALVQGEGAADSIVRGIHMLDQA-------EVD 179

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           +II+ RGGGSIEDLW FN+E + RAI     PIISA+GHETD+T+AD+ ADLRAPTP+ A
Sbjct: 180 VIIVGRGGGSIEDLWAFNEEKVARAIFECRTPIISAVGHETDFTIADFVADLRAPTPSAA 239

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRL 328
           AE+AV     +  ++  L  R+   + R  +     L          N +  L  +R RL
Sbjct: 240 AELAVADFRQILQNIAGLRDRMQKAMQRRAELGRAQLMQYQMRFQYLNPEAKLRDNRQRL 299

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
             L   L   ++  I  +       + R +    ++ + +    + +++
Sbjct: 300 ADLDELLRRAMKNRIAEERHMLGIYLERYRGLSPLYKLNQGYSFVSDRE 348



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 5/145 (3%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             I +N   + ++ Q   Q   +  R   ++ + +   L       + ++      +  L
Sbjct: 248 RQILQNIAGLRDRMQKAMQRRAELGRAQLMQYQMRFQYL-----NPEAKLRDNRQRLADL 302

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
              +   + ++I      + I     +  +    L +GY+ + D   N I   + + +  
Sbjct: 303 DELLRRAMKNRIAEERHMLGIYLERYRGLSPLYKLNQGYSFVSDREGNGIISTKQVHSGD 362

Query: 484 RILINFFDGQANAIVINKAPPKEQP 508
            + I+  DG   A V +        
Sbjct: 363 LLEISVTDGVIEAEVRSSRKEDWNK 387


>gi|269958313|ref|YP_003328100.1| exodeoxyribonuclease VII, large subunit [Anaplasma centrale str.
           Israel]
 gi|269848142|gb|ACZ48786.1| exodeoxyribonuclease VII, large subunit [Anaplasma centrale str.
           Israel]
          Length = 388

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 213/353 (60%), Gaps = 10/353 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            PE++V+E++  ++ ++      + +RGEISG     SSGH Y SLKD++S I A+ W G
Sbjct: 2   IPEFTVTEVTDLVQRVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDDNSVISAVCWNG 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           T  +++   E G+E +  G ++T+   S+YQ++IE ++ +G G L   LE+R+KKL +EG
Sbjct: 61  T--RLDVQFENGLEVICTGHLSTY--QSRYQLVIEGMVLAGQGKLAAMLEERRKKLEKEG 116

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF    K P+P +P  I VITSPTGAVIRDIL R+  RFP  +I++PV+VQG +    + 
Sbjct: 117 LFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQVQGSQASAMVV 176

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AIL  N L+E      PD+II+ARGGGSIEDLW FNDE + R  A S IPI+SAIGHET
Sbjct: 177 QAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTTAASKIPIVSAIGHET 231

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+ DYAAD+RAPTPT A E+ +P ++ L S + +   ++ + +   +  K + L  L 
Sbjct: 232 DFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDITHRFLKIRSAVRNALSAKEHRLLQLY 291

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  +   +S                L   + +K +H +++I RI      H
Sbjct: 292 GVLTEARHRISEVGRSALAQRARTGLLLRTALLKKQQHLDNLIGRIGRYNKKH 344



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 50/130 (38%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ ++    H    ++  +R     K+ ++  L+ +  + ++RI  +         R  
Sbjct: 257 ERQQLVSDITHRFLKIRSAVRNALSAKEHRLLQLYGVLTEARHRISEVGRSALAQRARTG 316

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            +L   +      +      +  +  K+ L  GY  + D     ++    LA    ++I 
Sbjct: 317 LLLRTALLKKQQHLDNLIGRIGRYNKKHILSVGYAIVYDGAGQHVSSANALAANETVVIE 376

Query: 489 FFDGQANAIV 498
           + DG+ +A +
Sbjct: 377 WEDGKRSAAI 386


>gi|78186228|ref|YP_374271.1| exodeoxyribonuclease VII large subunit [Chlorobium luteolum DSM
           273]
 gi|78166130|gb|ABB23228.1| Exodeoxyribonuclease VII large subunit [Chlorobium luteolum DSM
           273]
          Length = 402

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 197/362 (54%), Gaps = 8/362 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +     SVSEL+  +K  +ES    V V+GE+S  +  HSSGH Y +LKD  ++I A+IW
Sbjct: 1   MAEKTLSVSELTKRIKGELESIFPAVSVKGEVSNCK-KHSSGHIYLTLKDEGAQIPAVIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           K T  +I+   E+GI  +  G++  +P S +YQ+I  +L   G G L  A     +KL  
Sbjct: 60  KHTAARIKTTVEDGICVIAEGRLEVYPPSGRYQLICSALTEEGEGALQLAFAALLRKLAG 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G FS++ K   P  P+ I +ITSPTGAVI D+   +S RFP   + ++PVKVQG +   
Sbjct: 120 LGWFSEESKKMPPRFPETIGLITSPTGAVIEDMQNVLSRRFPSAALRLYPVKVQGRDAAL 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +  AI   N      +  RPD+II+ARGGGS+ED+  FN+E +  AI  S+IPIISAIG
Sbjct: 180 SVREAISWFNR----ESRNRPDVIIIARGGGSMEDMQAFNEESVAEAIHRSAIPIISAIG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD  ADLRA TP+ AAE+AVP    L   +    A  + +++  ++     ++
Sbjct: 236 HETDITIADMVADLRAGTPSIAAELAVPDSLELLRHIAAHAATQSGLVMGKVQGAEREVD 295

Query: 309 SLL--KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           S+    A       L     R++ +   +  +L+       + +   ++ +        +
Sbjct: 296 SIRGSYAFNRPLSMLQQFEERVEGMRDRMARSLQGTYRNTLQRYQAALSHLNLLDYRKTL 355

Query: 367 QK 368
           ++
Sbjct: 356 ER 357



 Score = 80.6 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 1/100 (1%)

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
            +  + +      ++ +  R+   L    ++           L    Y+ TL+RGY  +Q
Sbjct: 304 NRPLSMLQQFEERVEGMRDRMARSLQGTYRNTLQRYQAALSHLNLLDYRKTLERGYVLVQ 363

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
               N +T  R+L     + + F DG   A +  K   + 
Sbjct: 364 -KEGNVVTDGRSLKESEAVELWFHDGTIPASLTGKLRSRP 402


>gi|313887975|ref|ZP_07821653.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845930|gb|EFR33313.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 483

 Score =  267 bits (682), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 130/499 (26%), Positives = 223/499 (44%), Gaps = 25/499 (5%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +    ++VSEL+ ++K ++  +  L  + + GEI+     H +G+ YFSLKD  +RIDA+
Sbjct: 1   MAKSAFNVSELNNYIKKLISMDYILRDINITGEITNLNF-HKNGNIYFSLKDKFARIDAM 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
               +   I+    +G + +  G +T +  S +  + I  +   G G L       K+KL
Sbjct: 60  ---ASQEDIKINLFDGAKVMAKGTVTYYERSGRVFLYISQMDLDGKGNLYQEYLDLKEKL 116

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            +EGLF  +HK  +   P  I +ITS +GA IRD++     R     + ++P  VQG   
Sbjct: 117 TKEGLFDPRHKKSLKKYPSRIGLITSTSGAAIRDVINIFRKRNKTCDIFVYPSLVQGAYA 176

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + +   +   N  +        D II+ARGGGS EDL+ FNDE + R I  S IP+ISA
Sbjct: 177 AESLIAGVKYFNQEEP------VDTIIIARGGGSFEDLFVFNDEGLAREIFASKIPVISA 230

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE D+T+ D+ AD+RA TPT AAE+    ++ + S L   +++L N++ R + Y    
Sbjct: 231 VGHEVDYTICDFVADMRAATPTNAAELVTLSEDEIISELEKKKSQLKNLMDRRLDYNRLR 290

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +L K +   +Q    +    D L         ++ II             + +  L  
Sbjct: 291 LLNLYKNISIKNQIYKINERTRDLLRAHALLNSAMKKIIEGHEYDLQEKRFYLGNFKL-- 348

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              K  + I      ++ I       +  + +       +L    K+ +   H   K   
Sbjct: 349 ---KESKEIENYSYRLKNISVNINSRLNKDIESLNFDKKLLNYYFKSYVNDNHRKFKPFE 405

Query: 425 TRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
                  LS ++K+    +++    L S  ++   K     I  ++   +   R+ +   
Sbjct: 406 KFFATYDLSLRLKNERNRLNLLKMGLDSA-FEKINK---VEILGSDGKSLKSARDASLGD 461

Query: 484 RILINFFDGQANAIVINKA 502
            I + F DG+  + V    
Sbjct: 462 IISLKFKDGKLESKVQKVE 480


>gi|315303026|ref|ZP_07873737.1| exodeoxyribonuclease VII, large subunit [Listeria ivanovii FSL
           F6-596]
 gi|313628608|gb|EFR97030.1| exodeoxyribonuclease VII, large subunit [Listeria ivanovii FSL
           F6-596]
          Length = 329

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 124/331 (37%), Positives = 192/331 (58%), Gaps = 12/331 (3%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + +++++
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPTSGHLYFTVKDEFAMLRSVMFQ 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K  L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGIGALYIQLEQLKSHLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VII+P  VQGD+  ++
Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIIYPTIVQGDKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I  +N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGLINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD++L+D++AD+RA TPT AAE+AVP    L+  L   + RL     +L++ K   L  
Sbjct: 239 ETDFSLSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAATRQLLERKERKLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHN 338
           L + L        L     R D     L+  
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLKSA 329


>gi|260588124|ref|ZP_05854037.1| exodeoxyribonuclease VII, large subunit [Blautia hansenii DSM
           20583]
 gi|260541651|gb|EEX22220.1| exodeoxyribonuclease VII, large subunit [Blautia hansenii DSM
           20583]
          Length = 403

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 13/370 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +  YSV +++ ++K++ + +   + + ++GE+S  +  H+SGH YFSLKD    +  +++
Sbjct: 2   NSIYSVGQVNNYIKNMFQQDFLLNKISIKGEVSNCK-YHTSGHIYFSLKDETGALACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G    + F  + G + +V G ++ +    KYQ+  + +   G+G L       K +L E
Sbjct: 61  AGQRKGLAFPMKNGDKVVVSGSVSVYERDGKYQLYAKEITLEGAGLLYERFLALKAELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G+F+ ++K PIP   K + ++T+PTGA I+DI      R P +++I++P  VQGD   +
Sbjct: 121 MGMFAKEYKQPIPAYAKTVGIVTAPTGAAIQDIRNVAGRRNPYVQLILYPALVQGDGAKE 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I +L+           D++++ RGGGS+EDLW FN+E + RAI N   PIISA+G
Sbjct: 181 SIIEGIEKLDA-------YGVDVMLVGRGGGSVEDLWAFNEEEVARAIFNCKTPIISAVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+ ADLRAPTP+ AAE+AV     +  SL N   +L+  +   I+     + 
Sbjct: 234 HETDTTIADFVADLRAPTPSAAAELAVADIRGVFQSLENYRQKLSRNLENKIQLLQQQIK 293

Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                L   + +  +   R RL  L   ++  +E  IF   ++ N  I R+K    +  +
Sbjct: 294 YYENRLLYGSPEFQIREKRTRLLDLENRIQSAMEAQIFHARQNLNIYIERMKGLSPLEKL 353

Query: 367 QKNRQHILEK 376
            +   ++  +
Sbjct: 354 NQGFSYVENQ 363



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 53/136 (38%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q +   +Q + + ++  ++ +  + K     L  L    + +I    T +  L  RI+  
Sbjct: 268 QSLENYRQKLSRNLENKIQLLQQQIKYYENRL--LYGSPEFQIREKRTRLLDLENRIQSA 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +I     +++I    ++  +    L +G++ +++   + +T    +     + I   
Sbjct: 326 MEAQIFHARQNLNIYIERMKGLSPLEKLNQGFSYVENQTGSAVTGISQVKVGEELKIQVT 385

Query: 491 DGQANAIVINKAPPKE 506
           DG     V +    K 
Sbjct: 386 DGTIITKVTDVKKEKR 401


>gi|264678956|ref|YP_003278863.1| exodeoxyribonuclease VII large subunit [Comamonas testosteroni
           CNB-2]
 gi|262209469|gb|ACY33567.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           CNB-2]
          Length = 433

 Score =  267 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 119/415 (28%), Positives = 210/415 (50%), Gaps = 21/415 (5%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           + V  L + +   +++  + V VRGE+SG+    +SGH YF+LKD   +I   +++    
Sbjct: 2   WEVGALCHAIGDALQARFNPVAVRGELSGF-SRAASGHCYFNLKDASGQIRCAMFRRAAE 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++ F P +G    V G++  +      Q+++ES+  +G G L     + K +L  EGLF 
Sbjct: 61  QVGFSPRDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKAQLESEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K P+P +P+ I ++TS   A + D++  +  R P + V+I P  VQG + P+ +  A
Sbjct: 121 PARKRPLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVIVPALVQGPQAPQSLVQA 180

Query: 194 ILQLNTLKEGRT------------CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           + +L  L +                P  D I+L RGGGS+EDLW FNDE + R I  S +
Sbjct: 181 LSKLYRLAQAGNEASGDLRVDSARQPVIDTILLVRGGGSLEDLWAFNDEQLARTIVQSPV 240

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+IS +GHETD+T+AD+ ADLRAPTPT AAE+A   +E    +L   + R++N + R++ 
Sbjct: 241 PLISGVGHETDFTIADFCADLRAPTPTAAAELAAQPREVWLGALALAQDRMDNAVQRVLD 300

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +   L+   + L    + L+ ++ +L R  + L H++ + + R        I     + 
Sbjct: 301 RQAQRLDIAAQRLGRPSEQLARNQLQLSRQAQRLRHSMLLKLQR-LAQNQQAIQVNFPNI 359

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
              ++++ RQ +      ++ +         L  +   A+L   + +   ++   
Sbjct: 360 FQRSLEQQRQTLDRIDLRLQLLDP------RLVLQRGYALLTDQQGRPVTQVRQA 408


>gi|255655208|ref|ZP_05400617.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-23m63]
 gi|296451193|ref|ZP_06892934.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           NAP08]
 gi|296880455|ref|ZP_06904417.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           NAP07]
 gi|296260014|gb|EFH06868.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           NAP08]
 gi|296428409|gb|EFH14294.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           NAP07]
          Length = 401

 Score =  267 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 129/357 (36%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SE + ++K I+  +  LS++ V+GEIS ++  HSSG+ Y SLKD  S+++ +I+K   N
Sbjct: 8   ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     + GI+ +  G I+ +     YQ+ I  +   G G L     + K+KL +EGLF 
Sbjct: 67  R-NLKLDNGIKVIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            ++K PIP +P  I VITSPTGAVIRDI+  I  R+P + + ++PV VQGD+  +EI  A
Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIRRRYPKVNIKLYPVTVQGDKSAEEICEA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+
Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ +D+RAPTP+ AAE+A P  + +   L N+++RL+  +   I+     L ++   
Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRLSKSLTNQIELDQYRLEAVFNK 299

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + N     T+     +LD++  ++   +E  +  +      I   + +   +  + +
Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLRLEDEKLVKIGALLHNLSPLATMDR 356



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +++       +     + +    +  I  +  + +  + +     L  +  +  N + 
Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRLSKSLTNQIELDQYRLEAVFNKINNYLD 305

Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                     + K+  +I F + + ++     +     +L + +   T+ RGY+  Q  N
Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLRLEDEKLVKIGALLHNLSPLATMDRGYSIAQ-KN 364

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              I   + L  K  I I   DG    ++    
Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIEKIE 397


>gi|57238767|ref|YP_179903.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58578688|ref|YP_196900.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58616751|ref|YP_195950.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia
           ruminantium str. Gardel]
 gi|57160846|emb|CAH57744.1| exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416363|emb|CAI27476.1| Probable exodeoxyribonuclease VII large subunit [Ehrlichia
           ruminantium str. Gardel]
 gi|58417314|emb|CAI26518.1| Probable exodeoxyribonuclease VII large subunit [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 388

 Score =  267 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 147/340 (43%), Positives = 211/340 (62%), Gaps = 9/340 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           E++VSE++   +++V    +H+ VRGEIS       SGH YF+LKD+ + ++A+ W    
Sbjct: 4   EFTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVLNAVCW--NN 60

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            KIE   + G+E + IG +TT+   SKYQIIIES++ SG G L   L++RK KL +EGLF
Sbjct: 61  TKIEIDLKNGLEVICIGFLTTY--QSKYQIIIESMLLSGIGNLEIMLQQRKAKLEKEGLF 118

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193
               K  +P +PK I VITS TGA I DIL R+  RFP  ++IFPV VQG++   +I NA
Sbjct: 119 DQSRKKTLPLLPKTIGVITSTTGAAINDILNRVKSRFPSHIVIFPVLVQGNDAVTQIVNA 178

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I + N          PD++I+ARGGGS+EDLW FNDE+IVRAIA S IPI+SAIGHETD+
Sbjct: 179 IHKSN----NTETDCPDVLIIARGGGSVEDLWIFNDELIVRAIAKSRIPIVSAIGHETDF 234

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL DYAAD+RAPTPT A E+ +P K  +   + +   ++   +   +  K N L      
Sbjct: 235 TLVDYAADVRAPTPTAAVEIILPTKIQVTEYINSKFNKIKAALHYTVNTKRNKLLYFHNQ 294

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           L  +   +   + +L +   ++E  L++I+  K ++ N +
Sbjct: 295 LEITRHKIKVLKLQLFKHKNKVEILLKVILLNKRQYLNDL 334



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 46/110 (41%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            Y    K+ K+   H   E T+++I  L   + K   ++E +L   + +    ++     
Sbjct: 278 HYTVNTKRNKLLYFHNQLEITRHKIKVLKLQLFKHKNKVEILLKVILLNKRQYLNDLYYK 337

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           +  +  +  L+ GY  I D N+  I+  + L     I I   DG   AIV
Sbjct: 338 ISKYNKEKNLELGYAVIYDKNHQHISSVKKLQKNDIISIELQDGFIKAIV 387


>gi|83590358|ref|YP_430367.1| exodeoxyribonuclease VII large subunit [Moorella thermoacetica ATCC
           39073]
 gi|123524339|sp|Q2RIB5|EX7L_MOOTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|83573272|gb|ABC19824.1| Exodeoxyribonuclease VII large subunit [Moorella thermoacetica ATCC
           39073]
          Length = 402

 Score =  267 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 122/363 (33%), Positives = 203/363 (55%), Gaps = 12/363 (3%)

Query: 11  DHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    +V EL+ +L+ ++  +  L++V V+GEIS  R   +SGH YFSLKD  + +  ++
Sbjct: 3   EVKVLAVRELTAYLQRLLANDGRLANVWVKGEISNLRS-PTSGHLYFSLKDQAATLRCVM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G    +     +G+E +  G++  +P    YQ+ +  + P+G+G    AL++   +L 
Sbjct: 62  FQGRSRGLSLGLRDGLEVIARGQVAIYPRDGVYQLYVAEIFPAGTGLASLALQELTARLE 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGLF+   K P+P +P+ + ++TSPTGA +RD++     RFP + +I+ P +VQG+  P
Sbjct: 122 REGLFAADRKRPLPLLPRRVGLVTSPTGAALRDMITISRRRFPGIELILAPARVQGEVAP 181

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +++A A+  L            D+II+ RGGGS EDL  FN E++ RAI    +P+I+A+
Sbjct: 182 RQLALALELLAKR------GGVDVIIIGRGGGSAEDLSAFNTELVARAIYACPVPVIAAV 235

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TLAD  AD RAPTP+ AAEMAVPV+  L+  L +L  R    +   ++     L
Sbjct: 236 GHETDLTLADRVADRRAPTPSAAAEMAVPVRAELEQRLKSLAERARRGMEHRLELARARL 295

Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L K+  L    Q L   +  +D L + L  + E     + +  N +  R+++   +  
Sbjct: 296 ERLTKSSGLDRPRQELYYRQQYVDGLEQRLLASWERRSREREQGLNLLAARLEAASPLAI 355

Query: 366 IQK 368
           + +
Sbjct: 356 LAR 358



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 53/159 (33%), Gaps = 6/159 (3%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML---- 405
               +   ++       +       E +Q ++ + ++  R +    +   A L  L    
Sbjct: 243 LADRVADRRAPTPSAAAEMAVPVRAELEQRLKSLAERARRGMEHRLELARARLERLTKSS 302

Query: 406 -REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
             ++ +  ++Y   ++  L  R+      + +     +++    L++ +    L RGY  
Sbjct: 303 GLDRPRQELYYRQQYVDGLEQRLLASWERRSREREQGLNLLAARLEAASPLAILARGYAV 362

Query: 465 IQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            +   +   +   R +    ++ +   +G     V    
Sbjct: 363 CRRPGDGAPLKSSREVLPGEKVEVILKEGLLRCQVEEVG 401


>gi|167585672|ref|ZP_02378060.1| exodeoxyribonuclease VII large subunit [Burkholderia ubonensis Bu]
          Length = 303

 Score =  266 bits (680), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 105/289 (36%), Positives = 174/289 (60%), Gaps = 8/289 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E +   + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSVLNRAISTMLERSFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++  A+
Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGSAEKLVAAV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              N  +E       D++++ RGGGSIEDLW FNDE + RAIA S++P++S +GHETD+T
Sbjct: 200 ETANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASALPVVSGVGHETDFT 253

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +AD+AAD+RAPTPTGAAE+  P +  L   + + +  L   + R+++ +
Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLREVSDRQGALARGMRRVLEQR 302


>gi|68171557|ref|ZP_00544934.1| Exonuclease VII, large subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657931|ref|YP_506887.1| putative exodeoxyribonuclease VII, large subunit [Ehrlichia
           chaffeensis str. Arkansas]
 gi|67999023|gb|EAM85697.1| Exonuclease VII, large subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599388|gb|ABD44857.1| putative exodeoxyribonuclease VII, large subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 388

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 153/347 (44%), Positives = 215/347 (61%), Gaps = 9/347 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            PE++VSE++   ++ V    +H+ VRGEIS       SGH YF+LKD+ + ++AI W  
Sbjct: 2   TPEFTVSEITKIFQNFVHETFTHIKVRGEISNL-SQPKSGHTYFTLKDDAAVLNAICW-- 58

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              K+EF  + G+E +  G +TT+   SKYQ+I E+++ +G G L   LE+RK KL +EG
Sbjct: 59  NNTKVEFDLKNGLEVICSGFLTTY--QSKYQLITENMLLAGIGNLKIMLEQRKAKLEKEG 116

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LF   +K P+P +PKI  VITS TGAVI DIL R+  RFP  ++I PV VQG+E   +I 
Sbjct: 117 LFDQSNKKPLPLLPKITGVITSTTGAVINDILNRVKSRFPSHIVISPVSVQGNESINQII 176

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           +AI +LN         +PD+II+ARGGGSIEDLW FNDE IVRA+A SSIPI+SAIGHET
Sbjct: 177 DAISKLN----NADTNKPDVIIIARGGGSIEDLWIFNDESIVRAVARSSIPIVSAIGHET 232

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TL DYAAD+RAPTPT A E+ +P K  L   + +   ++   +   I  K   L  L 
Sbjct: 233 DFTLIDYAADVRAPTPTAAVEIVLPTKTQLIEHINSKFNKIKTTLHYKINKKKERLFYLH 292

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             L  +   +   + +L     ++E  L+I++  K +  N + N+I 
Sbjct: 293 NNLIKTKHQIKVLKLQLSEYKNKIEVLLKILLLNKKQSLNALYNKIN 339



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 60/130 (46%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +  ++E        +K  L Y   +KKE++  LH    +TK++I  L   + +   +IE 
Sbjct: 259 KTQLIEHINSKFNKIKTTLHYKINKKKERLFYLHNNLIKTKHQIKVLKLQLSEYKNKIEV 318

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +L   + +   S++     +  F  + TL+ GY  + DTN N I+  + L +   I I  
Sbjct: 319 LLKILLLNKKQSLNALYNKINKFNKEKTLEAGYAVLYDTNRNHISSIKKLKSNDIISIEL 378

Query: 490 FDGQANAIVI 499
            DG   AI+ 
Sbjct: 379 KDGIIEAIIK 388


>gi|313608934|gb|EFR84688.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL
           F2-208]
          Length = 328

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 120/325 (36%), Positives = 192/325 (59%), Gaps = 12/325 (3%)

Query: 13  PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
              +V+ ++ +++   E    +  V VRGEIS  +   +SGH YF++KD  + + ++++ 
Sbjct: 6   KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + KI F+PE+G+  L+ G+I  F  + +YQ   E + P G G L   LE+ K +L +E
Sbjct: 65  KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF++ HK  +P  P  +AV+TS TGA +RDIL  I  R P + VI++P  VQG++  ++
Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I ++N           D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH
Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD+ L+D++AD+RA TPT AAE+AVP    L+  L   + RL  +  ++++ K  +L  
Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 298

Query: 310 LLKALPN--SDQTLSCSRYRLDRLP 332
           L + L        L     R D   
Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFS 323


>gi|332653015|ref|ZP_08418760.1| exodeoxyribonuclease VII, large subunit [Ruminococcaceae bacterium
           D16]
 gi|332518161|gb|EGJ47764.1| exodeoxyribonuclease VII, large subunit [Ruminococcaceae bacterium
           D16]
          Length = 407

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 122/363 (33%), Positives = 210/363 (57%), Gaps = 12/363 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    + S++  ++K  ++ +  LS + VRGE+S Y+    SGH YF+LKD    +  ++
Sbjct: 4   EASILTPSQVGQYIKGFMDRDRLLSGLLVRGELSNYKMYP-SGHHYFTLKDREGALRCVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++G    + F P+ G++ +  G++T FP   +YQ+    L P G+G L  A E+ K++LL
Sbjct: 63  FRGDAASLRFRPQNGMQVIAAGRVTVFPRDGQYQMYCVRLTPEGAGDLFVAFEQLKERLL 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
            +GLF+ +HK P+P +P  IA++TSP GA +RD+L+ +  R+P+ +V I PV+VQG+   
Sbjct: 123 RQGLFAQEHKKPLPRMPGRIALVTSPAGAAVRDMLRILGARWPMAQVRILPVRVQGEGAA 182

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EIA AI   N  +        D++I  RGGGS+EDLW FN+E++ +AI +S+IP+ISA+
Sbjct: 183 EEIAAAIRWANLHQVA------DLVITGRGGGSMEDLWAFNEEVVAQAIYDSNIPVISAV 236

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+AD+ ADLRA TP+ AAE+AVP +  + ++L+  + R+   + + +      L
Sbjct: 237 GHEPDVTIADFVADLRAATPSNAAELAVPDQNEVYAALLGSKQRMEQAMRQRLLRGRQQL 296

Query: 308 NS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 + L +    +   R  LD   R ++  +  ++  K      +   + +   +  
Sbjct: 297 ERLGKSRMLTDPKAYVQDKRVLLDYQSRRMDQAMTNLLAVKRARTGQLAAALDAMSPLKV 356

Query: 366 IQK 368
           + +
Sbjct: 357 LGR 359



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 2/125 (1%)

Query: 381 EQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
           +Q ++Q +R   L  ++++  L    +    K  +      +     R++  +++ +   
Sbjct: 278 KQRMEQAMRQRLLRGRQQLERLGKSRMLTDPKAYVQDKRVLLDYQSRRMDQAMTNLLAVK 337

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
                     L + +    L RGY   Q  +   I+   + A   R  +   DG+    V
Sbjct: 338 RARTGQLAAALDAMSPLKVLGRGYAIAQKQDGGIISHTGDAAPGERFRLRVSDGELTCRV 397

Query: 499 INKAP 503
                
Sbjct: 398 EETDA 402


>gi|154151433|ref|YP_001405051.1| exodeoxyribonuclease VII, large subunit [Candidatus Methanoregula
           boonei 6A8]
 gi|153999985|gb|ABS56408.1| exodeoxyribonuclease VII, large subunit [Methanoregula boonei 6A8]
          Length = 424

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 120/372 (32%), Positives = 195/372 (52%), Gaps = 17/372 (4%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-- 61
            +  ++     +V E+S  ++ +++   L  + V GE++ Y+  HS GH YFSL +    
Sbjct: 16  PKTPAVTEAPLTVGEVSSLIEDLLDDRRLQDIRVLGEVTNYKH-HSRGHRYFSLSEKGGG 74

Query: 62  ---SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
              + I  ++W+   +++ F+PE+G+E +V G +  +  S  YQ+ ++ +   G G    
Sbjct: 75  STAAIIRCVMWRTDADRLVFVPEDGMEVVVTGSVRVYAPSGAYQVQVKRMTRGGLGEKYL 134

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
            +E+ KK+L  EG F+ + K P+P  P  + V+TS TGAVI DI   I+ RFP+ ++I P
Sbjct: 135 LVEQWKKELAAEGCFAAERKRPLPAFPARVGVVTSETGAVIHDIRIVIARRFPVEIVISP 194

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG+E   +IA AI ++ +          D++I+ARGGGS EDL+ FN   +VRAIA 
Sbjct: 195 TAVQGEEAHTDIALAITRVASH--------VDVVIVARGGGSFEDLFAFNHPDVVRAIAA 246

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             +P++SAIGHE D TLAD AAD+RAPTP+ AAE+ VP +  L+ +L  L  +L   ++ 
Sbjct: 247 CPVPVVSAIGHEVDVTLADLAADIRAPTPSAAAELVVPDRRDLRVALGELRCQLGGALLA 306

Query: 299 LIKYKINTLNSLLKALPNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +      +  L   L      + +   R     L   LE      I R       +   
Sbjct: 307 RVARAQKDVADLRDRLRPQRFCRKIGEKRQATADLSERLERAFVTRIERDRLVLAEMRTA 366

Query: 357 IKSDFLIHNIQK 368
           ++       + +
Sbjct: 367 LEGRSPRAVLAR 378



 Score = 81.0 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R    +K        +  ++   +I         L  R+E     +I+     ++     
Sbjct: 307 RVARAQKDVADLRDRLRPQRFCRKIGEKRQATADLSERLERAFVTRIERDRLVLAEMRTA 366

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           L+  + +  L RGY   +      +     L     + ++F+DG+   +V
Sbjct: 367 LEGRSPRAVLARGYCVAE-KGGTVVRSAGALHKDDHLSLHFYDGRGGVVV 415


>gi|170016837|ref|YP_001727756.1| exodeoxyribonuclease VII, large subunit [Leuconostoc citreum KM20]
 gi|169803694|gb|ACA82312.1| Exodeoxyribonuclease VII, large subunit [Leuconostoc citreum KM20]
          Length = 428

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 126/499 (25%), Positives = 215/499 (43%), Gaps = 82/499 (16%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64
           S +    ++S L+ +LK   +++  L  V V GEIS   G     H YFS+KD    + I
Sbjct: 2   SENQKYLTISALTAYLKRKFDADPYLQKVYVTGEISNM-GRRRGRHLYFSIKDPSGRAVI 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
            A ++    N+++F PEEG++   +G +  +  +  Y II++ + P G G L  A E+ K
Sbjct: 61  SAAMF-SYANRLKFQPEEGMKINAVGHVQLYEPNGTYAIILDDMTPDGVGALFLAYEQLK 119

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           KKL  EGLFS   K  +P +P+ IAV+TSPTGAVI DI++ +  RFP  +V+++P  VQG
Sbjct: 120 KKLSAEGLFSFPKKK-LPLLPRKIAVVTSPTGAVIEDIVRTVQRRFPSAQVVLYPAVVQG 178

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  K I   I +++         + D +I+ RGGGSIEDLW FNDEM+ R +A  SIP+
Sbjct: 179 EKAAKTIIKQIQRIDK------SNQYDTLIVGRGGGSIEDLWAFNDEMLARTVAELSIPV 232

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +S++G                 T     +     +    ++   L   +           
Sbjct: 233 VSSVG---------------HETDNTLIDFVADHRAATPTAAAELATPVT---------- 267

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                            L+    RL+ L   L+  L+  I  K +    + N +      
Sbjct: 268 -----------------LTQLITRLNELQVRLQLTLQQQIDVKRQRVARVANHVIFQQPD 310

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                  Q + + +  +EQ+++QH                         I      +  +
Sbjct: 311 CLYVGYNQRVDQLRHDLEQLMQQH-------------------------IVAARHRLTVV 345

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
             R   +    ++     + +    L S +    L RG+  + +     +   + +A + 
Sbjct: 346 SQRQSQMSQQILQQPREKLQLLAAKLDSMSPLKILVRGF-VVMEKEQQVVKSIQEIAAED 404

Query: 484 RILINFFDGQANAIVINKA 502
           ++ +   DG A A +I  +
Sbjct: 405 QVNLRLSDGVAKAKIIETS 423


>gi|121611789|ref|YP_999596.1| exodeoxyribonuclease VII large subunit [Verminephrobacter eiseniae
           EF01-2]
 gi|121556429|gb|ABM60578.1| Exodeoxyribonuclease VII large subunit [Verminephrobacter eiseniae
           EF01-2]
          Length = 444

 Score =  265 bits (678), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 113/384 (29%), Positives = 194/384 (50%), Gaps = 8/384 (2%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
                    + V  L   +   ++   + V VRGEI+G     SSGH YFS+KD H ++ 
Sbjct: 5   PDPIAAARVWEVGALCRAIADALQVRFNPVAVRGEITGLT-RASSGHCYFSIKDMHGQLR 63

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++   + ++F P +G    + G++  +    + Q I+E +  +G G L     + K 
Sbjct: 64  CAMFRRAASGLDFAPRDGQLVQLHGRLGVYEARGELQFIVEGMQQAGQGALFEQFLQLKA 123

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L  +GLF +  K P+P +P+ I ++TSP  A + D++  +  R P + V++ P +VQG 
Sbjct: 124 RLELQGLFDNARKRPLPALPRGIGLVTSPGAAALHDVVTALRRRVPHIPVLLVPAQVQGV 183

Query: 185 ECPKEIANAILQLNTL-----KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
                I  A+ +L  L       G   P  D+I+L RGGGSIEDLW FNDE + R I  S
Sbjct: 184 AAAPTIIAALAKLYGLAQAAAAPGADTPAIDVILLVRGGGSIEDLWAFNDEQLARMIVQS 243

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P++S +GHETD+T+AD+ ADLRAPTPT AAE+    +E   ++L  L  R+ +   R 
Sbjct: 244 PVPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPREFWLAALDLLVGRIRDGAQRQ 303

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           +  +   L+     L      ++  + +L RL + + H + + + +  +     +     
Sbjct: 304 LDARHQRLDQAAARLGRPSGLVAGQQLQLARLAQRMRHGVLLKMQQLGQT-QQALQTQLP 362

Query: 360 DFLIHNIQKNRQHILEKQQHIEQI 383
             L   + ++ + +     H+E +
Sbjct: 363 QQLRRRLGQHAERLERTALHLELL 386



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 49/133 (36%), Gaps = 3/133 (2%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLIT 425
            ++ +  + Q ++Q   +  R   L   +++ +  + +      +  +       + L T
Sbjct: 300 AQRQLDARHQRLDQAAARLGRPSGLVAGQQLQLARLAQRMRHGVLLKMQQLGQTQQALQT 359

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           ++   L  ++      +  T   L+    +  L+RGY  + DT    +T+ R       +
Sbjct: 360 QLPQQLRRRLGQHAERLERTALHLELLDPRLVLQRGYALLTDTGGQAVTRVRQARPGAAL 419

Query: 486 LINFFDGQANAIV 498
                DG  +  V
Sbjct: 420 RATLADGTVDVTV 432


>gi|299143830|ref|ZP_07036910.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518315|gb|EFI42054.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 420

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 131/489 (26%), Positives = 221/489 (45%), Gaps = 84/489 (17%)

Query: 17  VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V EL+ ++K  +  +  L+ V V GEIS ++  H++G+ YFSLKD++++I+AI++     
Sbjct: 6   VRELNKYIKKYIAMDYLLADVTVEGEISNFK-KHTNGNLYFSLKDDYAKINAIMYFSEAC 64

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            I F P+ G   +V G ++ F       + +  +   G G L       K+ L +EG+F 
Sbjct: 65  SINFSPKNGDSVIVKGSVSIFEKDGLINLYVRDMKIVGLGDLYERYLSLKESLYKEGIFD 124

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           +  K  IP+ P+ + VITSPTGA IRDI+  +S R P + ++++P  VQGD    ++   
Sbjct: 125 ESKKKKIPYFPQRVGVITSPTGAAIRDIINVLSRRNPAVDILLYPSNVQGDFATSQLIEG 184

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +               D+II+ RGGGS+E+L+ FNDE + R I + SIPIISA+GHE D+
Sbjct: 185 LNYF-------EKNPVDVIIIGRGGGSLEELFCFNDEELARKIYSMSIPIISAVGHEIDY 237

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ +DLRAPTP+ AAEM    KE L++ L  L+ RL+ I+ +               
Sbjct: 238 VISDFVSDLRAPTPSAAAEMVSMSKEDLENRLSLLKNRLDKILQQK-------------- 283

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                  +  +  R+D L   L    E     K      +        LI+ ++  +Q++
Sbjct: 284 -------VEDNTSRIDLLGEILNIKFEKFYANKLESLKKLDLENSKWKLIYKVKYKKQNL 336

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                                                                ++   + 
Sbjct: 337 ELTFN-----------------------------------------------NLDMKFNK 349

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
           KI      +      L+S  +    +R Y  +++     ++  ++L+    +LI+F DG 
Sbjct: 350 KISINKNLLYNIGEKLRSSKFT---QRIY--LKNKFGAIVSSVKDLSVGDEVLISFADGT 404

Query: 494 ANAIVINKA 502
           A A +    
Sbjct: 405 ATANISKTK 413


>gi|255306107|ref|ZP_05350279.1| exodeoxyribonuclease VII large subunit [Clostridium difficile ATCC
           43255]
          Length = 401

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SE + ++K I+  +  LS++ V+GEIS ++  HSSG+ Y SLKD  S+++ +I+K   N
Sbjct: 8   ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     + G++ +  G I+ +     YQ+ I  +   G G L     + K+KL +EGLF 
Sbjct: 67  R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            ++K PIP +P  I VITSPTGAVIRDI+  I  R+P + + ++PV VQGD+  +EI  A
Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+
Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ +D+RAPTP+ AAE+A P  + +   L N+++R++  +   I+     L ++   
Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + N     T+     +LD++  ++   +E  +  +      I   + +   +  + +
Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFRIENNLKLEDEKLVKIGALLHNLSPLATMDR 356



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +++       +     + +    +  I  +  + +  + +     L  +  +  N + 
Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305

Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                     + K+  +I F + + +K     +     +L + +   T+ RGY+  Q  N
Sbjct: 306 SYTIKDKVIQLDKIYDKIIFRIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              I   + L  K  I I   DG    ++    
Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397


>gi|301167915|emb|CBW27500.1| putative exodeoxyribonuclease VII large subunit [Bacteriovorax
           marinus SJ]
          Length = 429

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 121/485 (24%), Positives = 206/485 (42%), Gaps = 76/485 (15%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SVS L   +K ++E     V + GE++    + SSGH YF+L D  S + A ++K    +
Sbjct: 8   SVSTLVGKVKGLLEGQFRSVSIEGEVTNL-SLSSSGHYYFTLSDKSSALSACLFKMDAMR 66

Query: 76  IE--FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTALEKRKKKLLEEGL 132
                  + G +   IG I  +     +Q+I++ +  +  G  LL   E+ KKKL  EGL
Sbjct: 67  NPAIREIKNGDKVQCIGGIGVYAKRGSFQVIVKRITKTNVGGDLLAEFERLKKKLAGEGL 126

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
           F   +KN IP +PK IAVIT+  GA ++D L     R     V++ P  VQG+     I 
Sbjct: 127 FDLSNKNKIPTLPKKIAVITAQRGAALQDFLNITKRRTLWSNVMVVPALVQGEGAAASIR 186

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+               D+I+L RGGGS+EDLW FNDE +   I N  IPIISA+GH+ 
Sbjct: 187 KALFNTIKYSLENKENAVDVIVLTRGGGSLEDLWAFNDEALAWDIFNCPIPIISAVGHQV 246

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D++++DY +DLR  TP+ AA++    +  + S L N++  L++    +I  + + +    
Sbjct: 247 DFSISDYVSDLRCETPSAAAQILSEGQSQIISRLENIKKHLSSSGREIILARKDRV---- 302

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                                       E ++ +    +     R+    L     +   
Sbjct: 303 -----------------------HSLRPEALMNKVMNLYQDYKFRLSRCSLEKREFELLG 339

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + E+ Q +++ +K+    +    K++                                 
Sbjct: 340 -LHEQWQRLDESLKRMNLALERTLKDR--------------------------------- 365

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN---LATKTRILIN 488
            H++      +             N L+RGY+ + D++ + +   +    L +   + I 
Sbjct: 366 EHRVNKSFNMLGAL-------NPSNVLERGYSYMTDSSGHVVASSKEFSKLESGAELDIQ 418

Query: 489 FFDGQ 493
           F DG+
Sbjct: 419 FSDGK 423


>gi|332526256|ref|ZP_08402385.1| exodeoxyribonuclease VII, large subunit [Rubrivivax benzoatilyticus
           JA2]
 gi|332110090|gb|EGJ10718.1| exodeoxyribonuclease VII, large subunit [Rubrivivax benzoatilyticus
           JA2]
          Length = 641

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 122/383 (31%), Positives = 202/383 (52%), Gaps = 12/383 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR---ID 65
           +     +SV+ L       + +    V VRGEISG+    +SGH YFSLKD+  +   + 
Sbjct: 2   ASPRQVWSVAGLLLATADALSARFGAVAVRGEISGFT-RAASGHCYFSLKDHDGQPALLR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++     ++F P +G++  + G++  +    + QI++ESL   G+GTL     + + 
Sbjct: 61  CAMFRRAAALLDFQPRDGLQVELRGRLGVYDARGELQIVVESLQRLGAGTLYEEFLRLRA 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
           +L   GLF    K PIP  P+++ V+TSP  A +RD+L  ++ R P + V+++P  VQG 
Sbjct: 121 RLEAAGLFDAARKRPIPPHPRVLGVVTSPGAAALRDVLTALARRAPQVAVVVYPTPVQGG 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           E P  I  A+      +E        +++L RGGGS+EDLW FNDE +VRA+A S IP++
Sbjct: 181 EAPAAIVAALRTAADRRE------VQVLLLVRGGGSLEDLWAFNDERVVRAVAASPIPVV 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
             +GHETD TLAD AADLRAPTPT AAE+A P +  L  +L +    L   + R +  + 
Sbjct: 235 CGVGHETDVTLADLAADLRAPTPTAAAELAAPARVDLLVALASRSEALQRALRRQLDRQA 294

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L++    L      ++  R RL  L   L+  L   + ++ +    +  R+++   + 
Sbjct: 295 QRLDTAALRLGRPAAGVAQQRQRLAALELRLQQALAPQLSQRTQRAMALGLRLRAAT-VS 353

Query: 365 NIQKNRQHILEKQQHIEQIVKQH 387
            + + R ++   +Q +  +    
Sbjct: 354 RLDRLRSNLELGRQRLAALDPAR 376



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 51/142 (35%), Gaps = 3/142 (2%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIF--LEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITR 426
           R+ +  + Q ++    +  R      ++++++A L +  +Q    ++         L  R
Sbjct: 287 RRQLDRQAQRLDTAALRLGRPAAGVAQQRQRLAALELRLQQALAPQLSQRTQRAMALGLR 346

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +      ++    +++ +  + L +      L+RGY  ++  +   + +   L     + 
Sbjct: 347 LRAATVSRLDRLRSNLELGRQRLAALDPARVLQRGYAWVETPSGRPVLRADGLRPGDELR 406

Query: 487 INFFDGQANAIVINKAPPKEQP 508
             + DG A   V          
Sbjct: 407 AVWADGAAAIRVFGVERKGSAS 428


>gi|255100218|ref|ZP_05329195.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-63q42]
          Length = 401

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SE + ++K I+  +  LS++ V+GEIS ++  HSSG+ Y SLKD  S+++ +I+K   N
Sbjct: 8   ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     + G++ +  G I+ +     YQ+ I  +   G G L     + K+KL +EGLF 
Sbjct: 67  R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            ++K PIP +P  I VITSPTGAVIRDI+  I  R+P + + ++PV VQGD+  +EI  A
Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+
Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ +D+RAPTP+ AAE+A P  + +   L N+++R++  +   I+     L ++   
Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + N     T+     +LD++  ++   +E  +  +      I   + +   +  + +
Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +++       +     + +    +  I  +  + +  + +     L  +  +  N + 
Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305

Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                     + K+  +I F + + +K     +     +L + +   T+ RGY+  Q  N
Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              I   + L  K  I I   DG    ++    
Sbjct: 365 GKVINSIKGLKVKDSIDIVLKDGNLECMIDKIE 397


>gi|126698799|ref|YP_001087696.1| exodeoxyribonuclease VII large subunit [Clostridium difficile 630]
 gi|123363570|sp|Q18B66|EX7L_CLOD6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|115250236|emb|CAJ68057.1| Exodeoxyribonuclease 7 large subunit [Clostridium difficile]
          Length = 401

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SE + ++K I+  +  LS++ V+GEIS ++  HSSG+ Y SLKD  S+++ +I+K   N
Sbjct: 8   ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     + G++ +  G I+ +     YQ+ I  +   G G L     + K+KL +EGLF 
Sbjct: 67  R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            ++K PIP +P  I VITSPTGAVIRDI+  I  R+P + + ++PV VQGD+  +EI  A
Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+
Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ +D+RAPTP+ AAE+A P  + +   L N+++R++  +   I+     L ++   
Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + N     T+     +LD++  ++   +E  +  +      I   + +   +  + +
Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +++       +     + +    +  I  +  + +  + +     L  +  +  N + 
Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305

Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                     + K+  +I F + + +K     +     +L + +   T+ RGY+  Q  N
Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              I   + L  K  I I   DG    ++    
Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397


>gi|237752897|ref|ZP_04583377.1| exodeoxyribonuclease VII large subunit [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229375164|gb|EEO25255.1| exodeoxyribonuclease VII large subunit [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 414

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 121/367 (32%), Positives = 192/367 (52%), Gaps = 17/367 (4%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            S+++L+  +K ++E+    V V GE+S +   H+SGH YF+LKD +S +  ++++G   
Sbjct: 4   LSITDLNTQIKSLLEATFVQVRVSGEVSNFT-KHTSGHLYFTLKDKNSSLKCVMFRGNAA 62

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++F   EG++  + G I+ +     YQ+     IP G G LL A E+ K++  ++G F+
Sbjct: 63  KLKFQITEGMDLTLEGVISVYVPRGDYQLNCLDAIPKGIGALLLAYEQLKQEYEKKGYFT 122

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            Q    IP  PK +A++TS TGAV+ D+L     R+  +R ++    VQGD   + IA  
Sbjct: 123 KQKP--IPRFPKKVALLTSSTGAVLHDMLSIAKKRWNLVRFVLLDTLVQGDGAKESIAAN 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +   +TL         D IILARGGGS+EDLW FN+ M+  AI  S+ PIISAIGHE D 
Sbjct: 181 LKIADTL-------GADCIILARGGGSLEDLWAFNEPMVAEAIYQSNTPIISAIGHEPDV 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            L+D+ ADLRAPTP+ A E+ +P ++     L  L+  L  +++R ++ K N L +  + 
Sbjct: 234 VLSDFVADLRAPTPSAAMELLLPDEKEWLMRLDALQIDLEKLLMRALQAKSNALKAFKEK 293

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L           +      +      EI   +K  H   + +            K  Q +
Sbjct: 294 LNY------NPFFMKITQFQAQCQQQEIFFTQKMEHKLALSSFKLQVPQTQVHLKMEQKL 347

Query: 374 LEKQQHI 380
            + Q  +
Sbjct: 348 AQLQAKL 354


>gi|254974738|ref|ZP_05271210.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-66c26]
 gi|255092127|ref|ZP_05321605.1| exodeoxyribonuclease VII large subunit [Clostridium difficile CIP
           107932]
 gi|255313864|ref|ZP_05355447.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-76w55]
 gi|255516545|ref|ZP_05384221.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-97b34]
 gi|255649645|ref|ZP_05396547.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-37x79]
 gi|260682809|ref|YP_003214094.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           CD196]
 gi|260686407|ref|YP_003217540.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           R20291]
 gi|306519762|ref|ZP_07406109.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           QCD-32g58]
 gi|260208972|emb|CBA62022.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           CD196]
 gi|260212423|emb|CBE03288.1| exodeoxyribonuclease VII large subunit [Clostridium difficile
           R20291]
          Length = 401

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 17  VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           +SE + ++K I+  +  LS++ V+GEIS ++  HSSG+ Y SLKD  S+++ +I+K   N
Sbjct: 8   ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           +     + G++ +  G I+ +     YQ+ I  +   G G L     + K+KL +EGLF 
Sbjct: 67  R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            ++K PIP +P  I VITSPTGAVIRDI+  I  R+P + + ++PV VQGD+  +EI  A
Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVMVQGDKSAEEICEA 185

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I   N +         D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+
Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ D+ +D+RAPTP+ AAE+A P  + +   L N+++R++  +   I+     L ++   
Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299

Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + N     T+     +LD++  ++   +E  +  +      I   + +   +  + +
Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +++       +     + +    +  I  +  + +  + +     L  +  +  N + 
Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305

Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                     + K+  +I F + + +K     +     +L + +   T+ RGY+  Q  N
Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              I   + L  K  I I   DG    ++    
Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397


>gi|256827064|ref|YP_003151023.1| exodeoxyribonuclease VII, large subunit [Cryptobacterium curtum DSM
           15641]
 gi|256583207|gb|ACU94341.1| exodeoxyribonuclease VII, large subunit [Cryptobacterium curtum DSM
           15641]
          Length = 456

 Score =  265 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 109/502 (21%), Positives = 188/502 (37%), Gaps = 56/502 (11%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            ++ +    SVS+     K+ +ES    V + GE+S          AYF++KD  + +  
Sbjct: 2   SSATESTPLSVSQAMALAKNTLESC--TVTLVGEVSEVSVKPGYKAAYFTVKDTAASMPC 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++W             G    + G+ T +    +    + SL  +G G L   +    ++
Sbjct: 60  MMWMNRFRSEGIDLRVGQLVQLTGRFTVYAPKGRMNFDVFSLSAAGEGDLRQRVADLARR 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L  EGL     K  +P +P+ I ++TSP GA + D+L+ +  R+PL  +++  V V+G  
Sbjct: 120 LSAEGLMEASRKRALPGMPRTIGLVTSPHGAAVHDVLRTLRRRWPLSNILLAGVMVEGVN 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P EI   +  +               +L RGGGS EDL  FNDE + R IA   +P+++
Sbjct: 180 APAEIVEGLRVVVEAGAEVV-------LLVRGGGSFEDLMPFNDERLARTIARCPVPVVT 232

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D ++AD  AD RA TPT AAE  VP +  L  +L                    
Sbjct: 233 GIGHEPDTSIADMVADRRASTPTAAAEACVPDQRELALTLD------------------- 273

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
              S  +    +   L+    RLD L      +                        +  
Sbjct: 274 --ASADRLQAQATVRLADFTRRLDALASRPVLS----------------------DPLQA 309

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I + RQ I      + + +   L             L  +             ++    +
Sbjct: 310 IARFRQPIDLVSGRLTRAIPGALAADSAALAAHHMRLRAIGSSL---TSMRVENLTSSQS 366

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+             +  +    L   +  + + RG+  ++D     +     ++  T++
Sbjct: 367 RLSTAGRSLQTRFDEAWQMRAARLGDLSPLSVIGRGFALVRDDTGALVHSIDTVSPGTKV 426

Query: 486 LINFFDGQANAIVINKAPPKEQ 507
            I   DG  +A V      ++ 
Sbjct: 427 SIAVADGTIDAQVTATTHDEKT 448


>gi|269119850|ref|YP_003308027.1| exodeoxyribonuclease VII large subunit [Sebaldella termitidis ATCC
           33386]
 gi|268613728|gb|ACZ08096.1| exodeoxyribonuclease VII, large subunit [Sebaldella termitidis ATCC
           33386]
          Length = 446

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/493 (25%), Positives = 223/493 (45%), Gaps = 52/493 (10%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   ++VSEL+  +K  +E      ++ ++GEIS     + SGH YF+LKDN S +   
Sbjct: 1   MEAGIFTVSELNRAVKEYLEGTRAFKNIYIQGEISNIT-YYKSGHLYFTLKDNKSSVKCA 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126
           +++  +  +    +EG +  ++G  T +     +Q+I E L      G L    EK KK 
Sbjct: 60  VFRYMIKGVPRDLKEGDQVKLLGSATLYEQGGSFQVIGEHLEKQNKLGELYEKFEKLKKY 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185
             E G F+++ K  +P +P  I V+T+ TGA IRDI+     RF  + + ++P +VQG+ 
Sbjct: 120 YFELGYFNEEIKKKLPKVPLNIGVVTAETGAAIRDIINTAHKRFRNVNIYLYPSRVQGEG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+A  I   N  +  R     D II+ RGGGSIEDLW FN+E ++ A+  S +P+IS
Sbjct: 180 AAYEVARGIEIFN-RENVRERLDLDFIIIGRGGGSIEDLWAFNEEPVIEAVYKSDLPVIS 238

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D  L+D  AD+RA TPT A E++VP+K                           
Sbjct: 239 AVGHEIDNLLSDLTADIRAATPTQAIEISVPLKSD------------------------- 273

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                          +    YR + L      +L   I     +     +       ++ 
Sbjct: 274 --------------LIQELEYRKNLL----NKHLMNEIALMKNNLEKRKSNYIIRNFLNI 315

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + +  +++K+  + + +K  +     +      +L  ++   +++I      +  +  
Sbjct: 316 LIEKKMMMIDKENRLNKSLKYKIAASSEKLTMTKKLLSKIKL--EDKIKEKKEELTDMER 373

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +  +++ KIK    ++     +   +     LK+GYT  +      I +K +L     I
Sbjct: 374 ILTKLITEKIKEYKNNLEYKKAVAAKYNSGEILKQGYTLTKYK-GKLIVKKESLKKDDEI 432

Query: 486 LINFFDGQANAIV 498
              F DG+  +IV
Sbjct: 433 TTVFSDGEIKSIV 445


>gi|291087521|ref|ZP_06346683.2| exodeoxyribonuclease VII, large subunit [Clostridium sp. M62/1]
 gi|291074899|gb|EFE12263.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. M62/1]
          Length = 392

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 193/383 (50%), Gaps = 11/383 (2%)

Query: 31  NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90
            LS + ++GE+S  +  H+SGH YF+LKD  + I A+++      ++F   +G + +V G
Sbjct: 7   ALSRISIKGEVSNCK-YHTSGHIYFTLKDGLAAIQAVMFASRRGGLDFELRDGQQVVVKG 65

Query: 91  KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150
            +  +    +YQ+    +   G+G L    EK + +L E G+F+ ++K PIP   + + V
Sbjct: 66  SVEVYERDGRYQLYASQIALDGAGDLFRRFEKLRNELEEMGMFAPEYKRPIPKFARTVGV 125

Query: 151 ITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209
           +T+ TGA IRDI+   S R P ++++++P +VQG+   + IA  I  L+ +         
Sbjct: 126 VTASTGAAIRDIINISSRRNPYVQLVLYPARVQGEGAAESIARGIEVLDRM-------GL 178

Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
           D+II  RGGGSIEDLW FN+E++ RAI   S P+ISA+GHETD T+ADY ADLRAPTP+ 
Sbjct: 179 DVIIAGRGGGSIEDLWAFNEEIVARAIFRCSTPVISAVGHETDVTIADYVADLRAPTPSA 238

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYR 327
           AAE+AV      ++ L   +  L   + R I             L   +  + ++  R R
Sbjct: 239 AAELAVFDFGQFEAQLRGAKELLARGLKRKIDGVRYQTEQYRLKLRLHDPQRQINEKRQR 298

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           L     EL+  +E  +         +  R+     +  + +    I +++          
Sbjct: 299 LVSAEDELKRLMERRLSDCRHRLALMSGRLHGQSPLEKLSRGFGFITDEEGRRVDHAASV 358

Query: 388 LRYIFLEKKEKIAILHMLREQTK 410
                L  +     +    EQT+
Sbjct: 359 RPGDRLSIRLADGQIEARAEQTE 381



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 16/159 (10%), Positives = 48/159 (30%), Gaps = 5/159 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL-----EKKEK 398
                     +  +++       +       + +  +    +   R +         + +
Sbjct: 218 HETDVTIADYVADLRAPTPSAAAELAVFDFGQFEAQLRGAKELLARGLKRKIDGVRYQTE 277

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              L +     + +I      +      ++ ++  ++  C   +++ +  L   +    L
Sbjct: 278 QYRLKLRLHDPQRQINEKRQRLVSAEDELKRLMERRLSDCRHRLALMSGRLHGQSPLEKL 337

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
            RG+  I D     +    ++    R+ I   DGQ  A 
Sbjct: 338 SRGFGFITDEEGRRVDHAASVRPGDRLSIRLADGQIEAR 376


>gi|159901240|ref|YP_001547487.1| exodeoxyribonuclease VII large subunit [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159894279|gb|ABX07359.1| exodeoxyribonuclease VII, large subunit [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 392

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 120/393 (30%), Positives = 206/393 (52%), Gaps = 17/393 (4%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVSEL  ++  ++  +  +S V V GE+S  +  HSSGH Y +LK+  +RIDA+IW+ T
Sbjct: 4   LSVSELCGYINAVLTSDPVVSDVWVYGEVSNCK-RHSSGHWYLTLKEADARIDAVIWRST 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             ++ +LP++G+  L  GK+  +  + + QI ++ + P+G G L    E+ K +L  EGL
Sbjct: 63  ALRLSYLPQDGMAILGHGKVELY--NGRLQIYLDFITPAGEGLLQAQYERLKAQLEAEGL 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
              + K P+P  P+ I ++TSPTGA ++D+L  +  RFPL  VII P  VQG++    I 
Sbjct: 121 --TERKRPLPLFPQRIGIVTSPTGAALQDMLNVLRRRFPLAEVIIAPALVQGEDAAPSIV 178

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ +L           PD+II+ARGGGSIEDLW FN+E++ RA+  S +P+++ +GHET
Sbjct: 179 EALYELFDF-------EPDVIIVARGGGSIEDLWAFNEEIVARAVFASPVPVVTGVGHET 231

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNS 309
           D T+ D+ ADLRAPTP+ AAE+  P    L+  LI+    L+ +    ++   +      
Sbjct: 232 DTTIVDFVADLRAPTPSAAAELVTPDLVTLRDELISHVGLLHGLFQGRLQLLRSELGQQQ 291

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                 N    L  +  +++   ++L+  ++ ++             + +      + + 
Sbjct: 292 QQLLRHNPQMRLHQAHEQVNAQQQQLQRTIQRMLEMARLKVQVAERSLVALNPERTLARG 351

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
              +L   + +       +      +  +  + 
Sbjct: 352 YAVVLHNDRSLTNTSHVAVGDTINIQLHQGQLQ 384



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 1/115 (0%)

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
              R   L  +       +LR   + R+   H  +     +++  +   ++     V + 
Sbjct: 276 FQGRLQLLRSELGQQQQQLLRHNPQMRLHQAHEQVNAQQQQLQRTIQRMLEMARLKVQVA 335

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            R L +   + TL RGY  +   N+  +T   ++A    I I    GQ  A +  
Sbjct: 336 ERSLVALNPERTLARGYAVVLH-NDRSLTNTSHVAVGDTINIQLHQGQLQATITE 389


>gi|222444758|ref|ZP_03607273.1| hypothetical protein METSMIALI_00371 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434323|gb|EEE41488.1| hypothetical protein METSMIALI_00371 [Methanobrevibacter smithii
           DSM 2375]
          Length = 527

 Score =  263 bits (672), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 134/515 (26%), Positives = 226/515 (43%), Gaps = 59/515 (11%)

Query: 11  DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           ++  YS+S ++  +   +    +   + +RGEI+ + G ++SGH YFSLKD +S I  ++
Sbjct: 3   ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K +   ++F P+ G++ +  G+++ +      Q  +  +  +G G L  A EK KKKL 
Sbjct: 63  FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF D+    IP  PK I VITS +G  ++DI+  I  R+P  +I++   VQG    +
Sbjct: 123 KEGLFKDKKA--IPHYPKKIGVITSASGKAVKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I   N           D+II+ RGGGS +DLW FN E IVR+IANS  P+I+AIG
Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306
           H TD TL+D A+D  A TPT AAE+ VP K  L   L N+E RLN++I   +        
Sbjct: 234 HSTDKTLSDMASDKAAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           ++   K L +        +  L  L    E +L  +I       ++  N    +   + +
Sbjct: 294 ISKNNKTLKDPLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL------------------------ 402
            K    I   +  ++  +   L     +       L                        
Sbjct: 354 NKKVGKITLFKNELDNNISNCLLEYENKLNLHFKNLKSMNFIESFELKKNSLNLIENNLN 413

Query: 403 -------------------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                              + +       +      + ++   ++  ++  + S    + 
Sbjct: 414 NSINVTLNSHIHDLEIIKNNHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLR 473

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
           I    L+       L++GY  ++D +   I + + 
Sbjct: 474 ILEEKLKILNPDELLEKGY-VVKDPDE--IRKSKA 505


>gi|304440278|ref|ZP_07400168.1| exodeoxyribonuclease VII large subunit [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371327|gb|EFM24943.1| exodeoxyribonuclease VII large subunit [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 503

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 144/518 (27%), Positives = 239/518 (46%), Gaps = 42/518 (8%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              VSEL+ ++   ++ +   + + V GE+S Y   HSSG+ +FSLKD++S+ID  +   
Sbjct: 3   VLKVSELTNYISKYLKLDYFINDLSVEGEVSNYN-KHSSGNLFFSLKDDNSKIDCFMSVV 61

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + IE  PEEG   ++ G +T    +SK   +++S   SG G+LL      K+KL +EG
Sbjct: 62  DTSDIELFPEEGDRLIITGAVTLSEKTSKIIFVVKSFELSGEGSLLRKFTLLKEKLDKEG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
           LF   HK  IP  P  I V+TSPTGA I DIL  +  R   + +II+P  VQG+   + I
Sbjct: 122 LFDSIHKKQIPKFPNRIGVVTSPTGAAITDILNVMKRRNKNIDIIIYPSLVQGEGAAETI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              +  L+ +       + D IILARGGGS EDL+ FNDE I R I   S PIISA+GHE
Sbjct: 182 IEGLQTLDKM-------KLDCIILARGGGSKEDLFVFNDENIARTIFKLSTPIISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D++++DY ADLRAPTP+ AAE+       +  ++ +L+ R++  I   +  +   L  L
Sbjct: 235 IDFSISDYVADLRAPTPSAAAELVSCKLSDMIENIFDLKKRMDVSISNKLMIRDTKLQRL 294

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFR--------------------KYR 348
              L   +    ++ ++++L      +  + +  I                         
Sbjct: 295 RYGLNSHSPVLLINENKHKLSLYRDRITWSTKERITSNRLEVVKLKNFKDRLIAENINRH 354

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
             N    R  S  L +N+   +  ++  +  +++     L      +K K     +    
Sbjct: 355 KINLKNYRFISASLQNNLYYKKTRLIYNKNRLDK--HILLEISKAYQKNKALYNEISLRD 412

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
              +I +L   I  + ++I+  +  K+++    ++I    L     KN     +      
Sbjct: 413 LYFKIKHLRIDINSIESKIKSNIDSKLQNNLLKLNILKSKLDMEHRKN-----FGI--YK 465

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           +   I    ++   + I     DG  N  V +    ++
Sbjct: 466 DGKLIKSVNDVEVGSTIKSLLEDGILNLEVTSIEKVRK 503


>gi|229825478|ref|ZP_04451547.1| hypothetical protein GCWU000182_00838 [Abiotrophia defectiva ATCC
           49176]
 gi|229790041|gb|EEP26155.1| hypothetical protein GCWU000182_00838 [Abiotrophia defectiva ATCC
           49176]
          Length = 426

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 122/499 (24%), Positives = 203/499 (40%), Gaps = 80/499 (16%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +   +SV E++ ++K  +E + +  +V + GE+S  +     GH YF++KD+ + +   
Sbjct: 2   AEKKIFSVLEITRYIKSRLEGDFALRNVRISGEVSDCKED-KKGHLYFTIKDDGAVMGCA 60

Query: 68  IW-KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +W    ++ ++F  E G   +V G I  +     Y++  + +   G G L   LEK K+K
Sbjct: 61  MWSAKRISGLDFKLETGQHIVVTGNIGVYEKWGDYKLYADKIEKEGVGKLFEELEKLKQK 120

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF + HK PIP  PK I +ITS TGAVI DI +        ++++++P  VQG E
Sbjct: 121 LKAEGLFDEAHKKPIPKYPKKIGIITSRTGAVIEDIKRTAREANAYVQLLLYPATVQGAE 180

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               +   I +             D II+ RGGGSIEDLW FNDE + RA+ N SIPIIS
Sbjct: 181 AAATLIKGIKRF-------EKEGVDTIIIGRGGGSIEDLWCFNDERLARAVYNCSIPIIS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GH+TD TL D  +DL   TPT AA  AVP                             
Sbjct: 234 AVGHQTDRTLVDEVSDLSVATPTAAAMNAVP----------------------------- 264

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                          L  +   LD     + +  ++ I R     +     I+       
Sbjct: 265 --------------KLELAFGELDAYKDSIANKFQLKIDRMKAWLDKTDFSIRRQSPEMK 310

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++  + +     +  +                             ++      +     
Sbjct: 311 LKEVGRQLDNYSANFNR-------------------------NIAAKLDNYDRLLLNNKQ 345

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +E ++    +S +      T  ++  +    L  GY+ +++     +   + + T  R+
Sbjct: 346 MLERLMRASYESVNKRFISLTAEIEGKSPMKRLLGGYSYVENEAGENVRSIKAVKTGERL 405

Query: 486 LINFFDGQANAIVINKAPP 504
            +   DG   A V      
Sbjct: 406 NLVLSDGSLKARVEEINKK 424


>gi|152993545|ref|YP_001359266.1| exodeoxyribonuclease VII large subunit [Sulfurovum sp. NBC37-1]
 gi|151425406|dbj|BAF72909.1| exodeoxyribonuclease VII, large subunit [Sulfurovum sp. NBC37-1]
          Length = 422

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 190/369 (51%), Gaps = 12/369 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VS L+  +K ++E+   H+ V GE++     HSSGH YFS+KD+ S I  ++W+ ++ +
Sbjct: 6   TVSSLNTKIKSLLEATFMHILVEGEVASVT-YHSSGHLYFSIKDDKSAIKCVMWRSSVAR 64

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F  E+G+  +V G ++ +    +YQ     + P G G L  A E+ K++L  +G F  
Sbjct: 65  MKFRIEKGMHIVVEGSVSVYTPRGEYQFQTVRIEPYGKGALALAYEQLKERLKAKGYFDA 124

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K PIP   + IA++T+   A + D+L+ I  R+P L V I    VQG+    +IA+A+
Sbjct: 125 HRKKPIPKSIRKIALVTARESAALYDMLKIIEKRWPLLEVTIVDTLVQGESAAGQIAHAL 184

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
              +TL         D++++ RGGGS EDLW FN+E++  AI     P++SA+GHE D  
Sbjct: 185 RYADTL-------EADVVVVGRGGGSTEDLWCFNEELVADAIFAMQTPVVSAVGHEVDVM 237

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D  ADLRAPTP+ A EM +P  + +  +L   E R    I   +      L  + + L
Sbjct: 238 ISDLVADLRAPTPSAAMEMILPDLQEILYTLSEYEERFKQAITSRLTQSTRELKHVKEML 297

Query: 315 PN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 + L  S+    R+  E +  +   + R       + +      +   +Q+  QH
Sbjct: 298 HRSSPLRRLEESKMEFKRMEEEFKRMISYRMERFESVLPSMRDA-YVQTMQFTLQRKEQH 356

Query: 373 ILEKQQHIE 381
           +    + + 
Sbjct: 357 LDHLMKKLR 365


>gi|298245122|ref|ZP_06968928.1| exodeoxyribonuclease VII, large subunit [Ktedonobacter racemifer
           DSM 44963]
 gi|297552603|gb|EFH86468.1| exodeoxyribonuclease VII, large subunit [Ktedonobacter racemifer
           DSM 44963]
          Length = 411

 Score =  263 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 127/359 (35%), Positives = 204/359 (56%), Gaps = 13/359 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK-GT 72
           SVS LS  L+  +E+N  L  V V GE+S  +    SGH YF+LKD+ ++++ + +K   
Sbjct: 14  SVSALSVFLREWLETNDMLQDVRVYGEVSNCKTYP-SGHCYFTLKDSGAQLNCVFFKQSR 72

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           L        +G+   + G+I+ +    K Q+ +ES  P G G L   LE+ K +L  EGL
Sbjct: 73  LRSSAPTLRDGMGIALNGRISFYERDGKLQLYVESAEPLGVGALFERLERLKARLEAEGL 132

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+++ K  +P  P++I ++TSP  A +RD+L+ +  R+PL RVI+ P +VQG + P  IA
Sbjct: 133 FAEERKRVLPERPEVIGIVTSPQAAALRDMLRVLRQRYPLARVILAPAQVQGSDAPASIA 192

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+  LN   E       ++II  RGGGSIE+LW FN+E++VRAIA SSIP+IS +GHET
Sbjct: 193 AALDALNEHGEA------EVIIAGRGGGSIEELWAFNEEVVVRAIARSSIPVISGVGHET 246

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+TLAD+ ADLRA TPT AA  AVP  E  +  L++ +  L +++   ++     +  L 
Sbjct: 247 DFTLADFVADLRASTPTAAATAAVPNIEDWRIELLDRQQELGSLMEERLEELAAQVADLQ 306

Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L +      ++  R +LD     ++ ++  ++  +    +    ++ +   +  I +
Sbjct: 307 YQLEHRSPVGQINNYRQQLDEASERMQTHMRHLLSIRAERLSGQTLQLHALSPLLTIAR 365



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
           NI+  R  +L++QQ +  ++++  R   L  +       +       +I      + +  
Sbjct: 272 NIEDWRIELLDRQQELGSLMEE--RLEELAAQVADLQYQLEHRSPVGQINNYRQQLDEAS 329

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKT 483
            R++  + H +      +S  T  L + +   T+ RGY  ++   +   IT  + +    
Sbjct: 330 ERMQTHMRHLLSIRAERLSGQTLQLHALSPLLTIARGYAVVRHEPDQRLITSVKQVQAGD 389

Query: 484 RILINFFDGQANAIVINK 501
            + I   DG     V  +
Sbjct: 390 ALSIQVQDGSIPVTVREE 407


>gi|331000993|ref|ZP_08324629.1| exodeoxyribonuclease VII, large subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329569768|gb|EGG51532.1| exodeoxyribonuclease VII, large subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 577

 Score =  263 bits (671), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 122/447 (27%), Positives = 194/447 (43%), Gaps = 18/447 (4%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    +SV++    +    E     V V GEIS      SSGH YFS+KD  + +   ++
Sbjct: 1   MTDKAFSVTQFVDIVNLSFEQ-FESVAVEGEIST-STKASSGHWYFSIKDEEAVLSCAMF 58

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G L  +  + + G +  V GK   +PGS K   I   +  +G G L     + K +L  
Sbjct: 59  RGKLYSVRGVFKVGDKVRVTGKPNLYPGSGKLTFICSKIEAAGEGKLYELFLRLKNELTA 118

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F    K  IP +P+ I +ITS TGA ++D++ R+  R P +RV+++   VQG     
Sbjct: 119 LGWFDQSRKKAIPRVPRTIGIITSRTGAALQDVMNRLRARAPYVRVLLYHTAVQGKGAEA 178

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N         + D+++L RGGGS+EDLW FN++++  AI NS IPIIS IG
Sbjct: 179 EIAQRINKANQ------DNKADVLLLVRGGGSLEDLWCFNEKIVAEAIVNSHIPIISGIG 232

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+AAD RAPTPTGAAE A   +  L   + +    L+          +  + 
Sbjct: 233 HETDTTIADFAADFRAPTPTGAAEAAAEKQSVLFWEIDSAWVLLHRSFENQFNRALQDVE 292

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDFLIHN 365
           +  +   N    L   R+RL  +       L      +          +    S  L   
Sbjct: 293 NESRPFENPQAFLETFRHRLSAVSHLQRPVLSYYRQNLNSLKSRLQLDMQNFLSSSLERE 352

Query: 366 IQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
               R      + I   ++ ++             +     I   +       +      
Sbjct: 353 KFAARYFISPSRFIEPYEKRLQAASPILRLDTAAMRSRIDLIFSSINTAQSACLRMNRAE 412

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITT 446
           +      ++  +  KI+S   ++ +  
Sbjct: 413 LGVAEENLQAEMDVKIRSAGDALRLAA 439


>gi|258544964|ref|ZP_05705198.1| exodeoxyribonuclease VII, large subunit [Cardiobacterium hominis
           ATCC 15826]
 gi|258519767|gb|EEV88626.1| exodeoxyribonuclease VII, large subunit [Cardiobacterium hominis
           ATCC 15826]
          Length = 400

 Score =  262 bits (670), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 122/360 (33%), Positives = 190/360 (52%), Gaps = 13/360 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           Y+VS+L+  ++  +ES+   + V GEIS      +SGH YF+LKD+ +++   ++KG   
Sbjct: 4   YTVSQLNARIRAQLESDYRDIWVEGEISNL-SRPASGHLYFTLKDDAAQVACALFKGNSY 62

Query: 75  KIEF---LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           ++         G+   V G+ T +     YQ++++ +  +G G L   L++R+  L  EG
Sbjct: 63  RLSLPARELANGLAVRVHGRATLYEPRGNYQLVLDQIEAAGIGALEAELKRRRDMLAAEG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEI 190
            F    K PIP  P+ I +ITS +GA I D L  +  R PL  VII+P  VQG++ P ++
Sbjct: 123 CFDAARKRPIPPAPRQIGIITSASGAAIHDALTTLRRRNPLVGVIIYPSLVQGEQAPAQL 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I   N   E       D ++L RGGGS+EDLW +ND  ++RAIA S+IPIIS +GHE
Sbjct: 183 IRQIETANRRGE------CDTLLLIRGGGSLEDLWAYNDPNLIRAIAASAIPIISGVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TLAD AADLRAPTPT AA  + P        L  L+ +L+    R ++       +L
Sbjct: 237 TDVTLADLAADLRAPTPTAAAAHSCPDLGSSFQHLARLKEQLHGATRRRLQNAQQRQQTL 296

Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   N  + +  ++ R D+L   L         R+    + ++  +     ++ +Q+
Sbjct: 297 AHRLHQQNPQRQIRTAQQRADQLGERLHAAAHRRWQREQTRLSALMQHLHHLSPLNVLQR 356



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 54/160 (33%), Gaps = 5/160 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL-----RYIFLEKKEK 398
                    +   +++         +   +    QH+ ++ +Q       R    +++++
Sbjct: 235 HETDVTLADLAADLRAPTPTAAAAHSCPDLGSSFQHLARLKEQLHGATRRRLQNAQQRQQ 294

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                + ++  + +I        +L  R+      + +   T +S   + L   +  N L
Sbjct: 295 TLAHRLHQQNPQRQIRTAQQRADQLGERLHAAAHRRWQREQTRLSALMQHLHHLSPLNVL 354

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           +RGY    +     + +   +    +I +    G+ +  V
Sbjct: 355 QRGYALAYNAEGKTLARSDAVQPGDKISVRLASGRLHCTV 394


>gi|303257723|ref|ZP_07343735.1| exodeoxyribonuclease VII, large subunit [Burkholderiales bacterium
           1_1_47]
 gi|302859693|gb|EFL82772.1| exodeoxyribonuclease VII, large subunit [Burkholderiales bacterium
           1_1_47]
          Length = 577

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 121/447 (27%), Positives = 193/447 (43%), Gaps = 18/447 (4%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
           +    +SV++    +    E     V V GEIS      SSGH YFS+KD  + +   ++
Sbjct: 1   MTDKAFSVTQFVDIVNLSFEQ-FESVAVEGEIST-STKASSGHWYFSIKDEEAVLSCAMF 58

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +G L  +  + + G +  V GK   +PGS K   I   +  +G G L     + K +L  
Sbjct: 59  RGKLYSVRGVFKVGDKVRVTGKPNLYPGSGKLTFICSKIEAAGEGKLYELFLRLKNELTA 118

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F    K  IP +P+ I +ITS TGA ++D++ R+  R P +RV+++   VQG     
Sbjct: 119 LGWFDQSRKKAIPRVPRTIGIITSRTGAALQDVMNRLRARAPYVRVLLYHTAVQGKGAEA 178

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N         + D+++L RGGGS+EDLW FN++++  AI NS IPIIS IG
Sbjct: 179 EIAQRINKANQ------DNKADVLLLVRGGGSLEDLWCFNEKIVAEAIVNSHIPIISGIG 232

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+AD+AAD RAPTPTGAAE A   +  L   + +    L+          +  + 
Sbjct: 233 HETDTTIADFAADFRAPTPTGAAEAAAEKQSVLFWEIDSAWVLLHRSFENQFNRALQDVE 292

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDFLIHN 365
           +  +   N    L   R+ L  +       L      +          +    S  L   
Sbjct: 293 NESRPFENPQAFLETFRHHLSAVSHLQRPVLGYYRQNLNSLKSRLQLDMQNFLSSSLERE 352

Query: 366 IQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
               R      + I   ++ ++             +     I   +       +      
Sbjct: 353 KFAARYFISPSRFIEPYEKRLQAASPILRLDTAAMRSRIDLIFSSINTAQSACLRMNRAE 412

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITT 446
           +      ++  +  KI+S   ++ +  
Sbjct: 413 LGVAEENLQAEMDVKIRSAGDALRLAA 439


>gi|118474545|ref|YP_891459.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus subsp.
           fetus 82-40]
 gi|158512502|sp|A0RMM6|EX7L_CAMFF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|118413771|gb|ABK82191.1| exodeoxyribonuclease VII, large subunit [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 387

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 121/338 (35%), Positives = 184/338 (54%), Gaps = 11/338 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+   K ++E++ S V V GEIS     HSSGH YFSLKD  S I + ++K +  +
Sbjct: 2   TVSELNEQAKALLETHFSFVEVTGEISRL-IRHSSGHWYFSLKDEKSVISSAMYKFSNQQ 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           ++F  ++G++  + GK+T +P S  YQ++   ++P G G L  A  + K KL  EGLF  
Sbjct: 61  VKFEVKDGMQVTIYGKLTIYPPSGSYQLLANKMLPVGIGELELAFNQLKSKLENEGLFDI 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194
           + K P+P  PK IA++TS T A  +D+L+ I+ R+ L   I F   VQG+     I   +
Sbjct: 121 KFKKPLPKFPKKIAIVTSLTSAAYQDMLKVINSRYKLCEFIAFNTLVQGEMAAANIIQML 180

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            + + +         D I+LARGGGS EDLW FNDE + R I     PI+SA+GHE D+ 
Sbjct: 181 QKADKM-------GFDAIVLARGGGSKEDLWCFNDENLARVIFTLKTPIVSAVGHEIDYC 233

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ +D R+ TPT A    +P    +  SL     +  + I    +   N LN + ++L
Sbjct: 234 ISDFVSDHRSLTPTAAMVDLLPDANTILQSLDIAFDKFESFIDGKFQNSFNILNLINQSL 293

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
            N  Q +S    + +      + NLE +I  K  +  H
Sbjct: 294 KN--QAISQKIEKANLTLENKKANLENLITSKINNLAH 329


>gi|289423082|ref|ZP_06424897.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus
           anaerobius 653-L]
 gi|289156413|gb|EFD05063.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus
           anaerobius 653-L]
          Length = 399

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 126/360 (35%), Positives = 198/360 (55%), Gaps = 13/360 (3%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              VSEL+ ++K ++  E  L +V V+GE+S ++ IHSSG+ Y SLKD  S+++ II + 
Sbjct: 5   PLEVSELNSYIKKLIADEPILGNVMVKGEVSNFK-IHSSGNVYLSLKDKDSKVNCIILRR 63

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              + + + ++G + +  G +  +     YQ+ I S+   G G L     + K++L +EG
Sbjct: 64  NFAQ-DMVIKDGTKIIASGSVRVYERDGAYQLYINSVEVEGMGNLYYQYLQMKERLEKEG 122

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LFS  HK  IP  PK+I VITSPTGAVIRDI+  +S R+P + + +FPV VQG+   + +
Sbjct: 123 LFSPMHKKKIPRFPKVIGVITSPTGAVIRDIINVVSRRYPRVEIKLFPVLVQGERSEESL 182

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+   N           D II+ RGGGS+E+LW FN E + R I +S IPIISA+GHE
Sbjct: 183 IRALDFFNRR------DDIDTIIIGRGGGSLEELWSFNSEALARKIFDSKIPIISAVGHE 236

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LN 308
           TD+T+ D+ ADLRAPTP+ AAE+A P  + L +S   L  R++  +   I+ +      +
Sbjct: 237 TDYTICDFVADLRAPTPSSAAELATPDLKDLLASQDILVKRMSRAVSNKIEIERQKVSRS 296

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                       +  S  RLDR+   +  +++  +       + I   + +      + +
Sbjct: 297 IEKTHTIVQKDMIDMSYVRLDRMQERMAASVDRRMVDYKNKLSLIGVSMGNLNPFSVMDR 356



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 51/133 (38%), Gaps = 3/133 (2%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIE 428
           + +L  Q  + + + + +      +++K++           K+ I   +  + ++  R+ 
Sbjct: 265 KDLLASQDILVKRMSRAVSNKIEIERQKVSRSIEKTHTIVQKDMIDMSYVRLDRMQERMA 324

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +  ++      +S+    + +    + + RGY+ ++ +    + +  ++     I I 
Sbjct: 325 ASVDRRMVDYKNKLSLIGVSMGNLNPFSVMDRGYSVVESSGG-LVQKTTDVELGEDIDIL 383

Query: 489 FFDGQANAIVINK 501
             DG     V  K
Sbjct: 384 LSDGSLRCQVKEK 396


>gi|302670344|ref|YP_003830304.1| exodeoxyribonuclease VII large subunit XseA [Butyrivibrio
           proteoclasticus B316]
 gi|302394817|gb|ADL33722.1| exodeoxyribonuclease VII large subunit XseA [Butyrivibrio
           proteoclasticus B316]
          Length = 391

 Score =  261 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 118/367 (32%), Positives = 194/367 (52%), Gaps = 13/367 (3%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK--IEFLPEEGIEFLVI 89
           L  + V+GE+S  +  HSSGH YF++KD    I  ++++G   +  + F  +EG +  V 
Sbjct: 8   LKAITVKGEVSNCK-YHSSGHIYFTIKDAGGAIACVMFRGDRERGGLRFNMQEGQQVKVT 66

Query: 90  GKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149
           G I  +    +YQ+    ++  G+G L    E+ KK+L E GLF++++K PIP     + 
Sbjct: 67  GSIDVYERDGRYQLYARQIMLDGAGVLYERYEELKKRLAETGLFAEEYKQPIPRYIHTLG 126

Query: 150 VITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208
           V+T+PTGA +RDI+   + R P +++I++P  VQGD+  + I   I  L   +       
Sbjct: 127 VVTAPTGAAVRDIINVATRRNPHIQIILYPAIVQGDQAAESIVKGIEALAQRQ------- 179

Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268
            D II+ RGGGSIEDLW FN+E++ +AI +  IPIISA+GHETD T+ADY AD RAPTP+
Sbjct: 180 VDTIIVGRGGGSIEDLWAFNEEIVAQAIFDCPIPIISAVGHETDTTIADYVADRRAPTPS 239

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRY 326
            AAE+AV      +  + +    L+  + R +           + L   +    +     
Sbjct: 240 AAAELAVFEYARFEQDIQDYAYSLHKSMDRALSDLRQREKRYQETLRLLSPMGKVRDRLL 299

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           R+D+   EL+H ++  I       +  I ++K    +  ++    +I + + +  + +  
Sbjct: 300 RIDQYQDELQHLMDQKITDARHRLDIDIEKLKGLSPLDRLKGGYSYISDDKGNNIRSISG 359

Query: 387 HLRYIFL 393
             R   L
Sbjct: 360 VQRDDEL 366



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%)

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           L ++EK     +       ++      I +    ++ ++  KI      + I    L+  
Sbjct: 274 LRQREKRYQETLRLLSPMGKVRDRLLRIDQYQDELQHLMDQKITDARHRLDIDIEKLKGL 333

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +  + LK GY+ I D   N I     +     + +   DG     VI+ 
Sbjct: 334 SPLDRLKGGYSYISDDKGNNIRSISGVQRDDELSLYVTDGVIRTRVIDT 382


>gi|124267668|ref|YP_001021672.1| exodeoxyribonuclease VII large subunit [Methylibium petroleiphilum
           PM1]
 gi|124260443|gb|ABM95437.1| Exodeoxyribonuclease VII large subunit [Methylibium petroleiphilum
           PM1]
          Length = 447

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 121/377 (32%), Positives = 191/377 (50%), Gaps = 11/377 (2%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWKG 71
            + V+ L + +   + +  + V VRGE+SGY    +SGH YF+LKD    + +   +++ 
Sbjct: 27  VWEVAALVHAVADTLAARFASVAVRGEVSGYT-RAASGHCYFTLKDAEGTAALRCAMFRR 85

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + ++F PEEG    + G++  +    + Q ++ES+  +G+G L     + K +L  EG
Sbjct: 86  AASLLDFAPEEGHLVELRGRLAVYEPRGELQFVVESMQRAGAGALYERFLRLKAQLEAEG 145

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K  I   P  I V+TS   A + D+L  +  R P +RVI++P  VQG E P  +
Sbjct: 146 LFDATRKRTIVRHPACIGVVTSLAAAALHDVLTALQRRAPQVRVIVYPSPVQGAEAPAAL 205

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI             R D +I+ARGGGS+EDLW FN+ ++VRA+A S IP+I+ IGHE
Sbjct: 206 AAAIET------AGRHGRADTLIVARGGGSLEDLWAFNEALVVRAVAASRIPVIAGIGHE 259

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD +L D+AADLRAPTPT AAE+A   +E   + L +L  R    +   +  +   L+  
Sbjct: 260 TDVSLVDFAADLRAPTPTAAAELAAMPREEALAVLHDLARRARRGVALRLDGQAQRLDRT 319

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L    Q L+  R RL  L +     +   + R+ +    + +R         + +  
Sbjct: 320 ALRLARPAQALAPHRERLALLSQRQRTAMHRHLERQQQRQAVLASRWMQAARQLRL-RAV 378

Query: 371 QHILEKQQHIEQIVKQH 387
           Q +      +  +  Q 
Sbjct: 379 QRLDVLVARLGALDPQR 395



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 45/161 (27%), Gaps = 22/161 (13%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R+  L     + +  ++ +      + +++    +   +    +      +  L  R   
Sbjct: 287 REEALAVLHDLARRARRGVALRLDGQAQRLDRTALRLARPAQALAPHRERLALLSQRQRT 346

Query: 430 ILSHKIKSCH----------------------TSVSITTRILQSFAYKNTLKRGYTSIQD 467
            +   ++                           + +    L +   +  L RGY  + D
Sbjct: 347 AMHRHLERQQQRQAVLASRWMQAARQLRLRAVQRLDVLVARLGALDPQRVLSRGYAWLGD 406

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
                +T    L     +     DG+  A VI   P K + 
Sbjct: 407 AEGRALTSVNQLQPGQTVKARLADGRIEAQVIGIEPDKPRR 447


>gi|322392011|ref|ZP_08065474.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC
           700780]
 gi|321145109|gb|EFX40507.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC
           700780]
          Length = 317

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 125/298 (41%), Positives = 178/298 (59%), Gaps = 11/298 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ + I A IW
Sbjct: 27  EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 84

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  V+G++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 85  SGIYQKLGFDLEEGMKVNVVGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLSE 144

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF D+ K  IP   K I V+TS +GAVI+DI+  +  RFP + +I++P KVQGD   +
Sbjct: 145 EGLFQDRFKQAIPQFSKRIGVVTSRSGAVIQDIITTVGRRFPGVEIILYPTKVQGDGAAE 204

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N  ++       D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 205 EIARNIARANERED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 258

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  + +     ++    K   
Sbjct: 259 HETDVTLADFVADKRAATPTAAAELATPVSKFDLLTYLKNQEKRMATAVQNTLSKKKK 316


>gi|254251599|ref|ZP_04944917.1| Exonuclease VII large subunit [Burkholderia dolosa AUO158]
 gi|124894208|gb|EAY68088.1| Exonuclease VII large subunit [Burkholderia dolosa AUO158]
          Length = 515

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 151/260 (58%), Gaps = 10/260 (3%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PF+   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 58  SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 116

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF+P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 117 QQAQMRCVMFRGRAQYAEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 176

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD++  ++ R P + VI++P
Sbjct: 177 FLRLKAQLEGEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVVTTLARRAPHIPVIVYP 236

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG    +++  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAIA 
Sbjct: 237 APVQGAGAAEKLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 290

Query: 239 SSIPIISAIGHETDWTLADY 258
           S +P++S +GHETD+T+AD+
Sbjct: 291 SELPVVSGVGHETDFTIADF 310


>gi|171059233|ref|YP_001791582.1| exodeoxyribonuclease VII large subunit [Leptothrix cholodnii SP-6]
 gi|170776678|gb|ACB34817.1| exodeoxyribonuclease VII, large subunit [Leptothrix cholodnii SP-6]
          Length = 432

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 14/428 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK--DNHSRIDAIIWKG 71
            + V+ L   +   +++    V VRGE++G     +SGH YF+L+  D  + +   +++ 
Sbjct: 12  VWDVAALVQAVGDALQARFGAVAVRGELAGVT-RAASGHCYFNLRSVDGSAGLRCAMFRR 70

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + ++F P +G +  + G++  +    + Q+I+E++ P+G+G L+    + K +L  EG
Sbjct: 71  AASMLDFTPRDGQQVELRGRLAVYEPRGELQLIVEAMRPAGAGALMEQFLRLKARLEGEG 130

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K PI   P  I V+TS   A +RD+   +  R P +R++I+P  VQG + P ++
Sbjct: 131 LFEPSRKRPIEPYPAAIGVVTSLAAAALRDVASALQRRAPQVRLVIYPASVQGADAPAQL 190

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI       E         +++ RGGGS+EDLW FNDE +VRAIA S +P+I  +GHE
Sbjct: 191 VEAIRLAGQRAE------VQTLLVCRGGGSLEDLWAFNDEQVVRAIAASPLPVICGVGHE 244

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD+TLAD+AADLRAPTPT AAE+A P +     +L      L+  +   +      L+ +
Sbjct: 245 TDFTLADFAADLRAPTPTAAAELAAPARADCLQALAQQARWLSQRVHHRLDRDAQRLDRI 304

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
            + L      L     RL  L +       + +  +      + +R++         + +
Sbjct: 305 AQRLARPADALRGHLQRLALLEQRHARAAPVWLQGQQHRLERLQSRLQDAGARALQSREQ 364

Query: 371 QH--ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT--HIKKLITR 426
               +  +   ++        Y +L       +  +   Q   R+  +     +  ++  
Sbjct: 365 TLAVLAARHAALDPGQVLRRGYAWLNDASGQPVTSVRALQPGQRLSAVLQDGRVDSVVEA 424

Query: 427 IEFILSHK 434
           +   ++ +
Sbjct: 425 VLPAMARR 432



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 60/159 (37%), Gaps = 5/159 (3%)

Query: 355 NRIKSDFLIHNIQKNR--QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           + +++          R    +    Q +++I ++  R     +     +  + +   +  
Sbjct: 274 DCLQALAQQARWLSQRVHHRLDRDAQRLDRIAQRLARPADALRGHLQRLALLEQRHARAA 333

Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +      +++L +R++   +  ++S   ++++      +      L+RGY  + D +
Sbjct: 334 PVWLQGQQHRLERLQSRLQDAGARALQSREQTLAVLAARHAALDPGQVLRRGYAWLNDAS 393

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
              +T  R L    R+     DG+ +++V    P   + 
Sbjct: 394 GQPVTSVRALQPGQRLSAVLQDGRVDSVVEAVLPAMARR 432


>gi|225025923|ref|ZP_03715115.1| hypothetical protein EUBHAL_00159 [Eubacterium hallii DSM 3353]
 gi|224956709|gb|EEG37918.1| hypothetical protein EUBHAL_00159 [Eubacterium hallii DSM 3353]
          Length = 402

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 101/360 (28%), Positives = 176/360 (48%), Gaps = 14/360 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            +SV++++ ++  I ES+  L  + ++GE+S  +  HSSGH YF+LKD  S +  +++  
Sbjct: 4   IFSVTQINSYIHRIFESDYALKKIYLKGEVSNCK-YHSSGHIYFTLKDEKSALRCVMFSS 62

Query: 72  -TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                + F  E+G      G I+ +  +  YQ+ +  +  SG+G L    E+ K++L ++
Sbjct: 63  DRYKGLTFHLEDGQLIEACGNISVYEQTGTYQMYVRKIELSGAGELYIRYEQLKQELAQK 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G F  + K P+P  P+ I ++T+ TGA I DI      R P +++ ++P KVQG+    +
Sbjct: 123 GYFDFERKKPLPPYPEKIGIVTALTGAAIEDIKSIAKRRNPSVQLYLYPSKVQGEGAAAQ 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA  I   +T                     IEDLW FN+  +  AI  +  PIIS  GH
Sbjct: 183 IARGIRYFDTAGVDIIIIGRGGGS-------IEDLWAFNEIEVADAIYYADTPIISGTGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+ADY AD+RA TP+ A E+A+P      + + N +  L  ++ + +         
Sbjct: 236 EIDMTIADYCADVRAATPSAACELAIPDMTSFYTRMHNYQEVLGTLLQQKLMLMYGKTAL 295

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L     D+ L   +   +RL   L+  +      + + F   ++R+ +      ++
Sbjct: 296 LERQLEAQRPDKKLMSHQLIYERLEGRLQQAMRDKYQSRQQQFTRYVDRLSALSPTSRLR 355



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 2/135 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +   Q+ +  +++Q  + + +  K  +    +  ++   ++       ++L  R++  +
Sbjct: 270 RMHNYQEVLGTLLQQ--KLMLMYGKTALLERQLEAQRPDKKLMSHQLIYERLEGRLQQAM 327

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             K +S     +     L + +  + L+ GY   Q    N +T    +  +    I F D
Sbjct: 328 RDKYQSRQQQFTRYVDRLSALSPTSRLRGGYVFAQTKEGNPLTSAGQIEKENPFFITFSD 387

Query: 492 GQANAIVINKAPPKE 506
           GQA  + ++    K+
Sbjct: 388 GQAEVMPVSVKKNKK 402


>gi|289523060|ref|ZP_06439914.1| exodeoxyribonuclease VII, large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503603|gb|EFD24767.1| exodeoxyribonuclease VII, large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 410

 Score =  260 bits (664), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 123/371 (33%), Positives = 194/371 (52%), Gaps = 13/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           P            SV EL+++LK ++E +  L +V V+GEI   +  H+SGH YFS+   
Sbjct: 2   PLLNNLPKTSNVISVDELTFYLKDLIEKDPILRNVAVKGEIIEIK-RHNSGHVYFSIGSK 60

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            SR+  +++K   N I   P+ G E +V G I  +P    YQ+   +++P G G    A 
Sbjct: 61  QSRLSCVMFKSNANYIPLWPQAGDEVIVQGYIGLYPPQGAYQLYARNILPLGKGAQTRAK 120

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ KK+L +EGLF  + K  +P  P  + V+TS TGA ++D+++    RFP  R+ +FP 
Sbjct: 121 EELKKRLEKEGLFDPRVKRKLPPYPNKVGVVTSQTGAAVKDVIKVAKKRFPQCRIYVFPT 180

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG E P++I  A+               DI++L RGGGS +DL  F+DE +VR+I   
Sbjct: 181 LVQGIEAPQDIVRAMQLA-------ATKELDILLLVRGGGSRDDLTPFDDERVVRSIRAC 233

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P+++ +GHE DWTL+D AAD+RAPTP+ AAE   P +  L   + +++ARL ++++  
Sbjct: 234 PFPVVTGVGHEIDWTLSDLAADMRAPTPSAAAENVFPDRIELYKQIRHMKARLLSLVLHK 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCS--RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            +   N     L  L N  + L        + RL + L  N+  II        H    +
Sbjct: 294 CQQVSNLCERQLARLQNILKNLYLHPAGIEIARLTQNLSMNMNKIISSLKERLTHSAASL 353

Query: 358 KSDFLIHNIQK 368
            +   +  + +
Sbjct: 354 DALSPLKCLSR 364



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 19/170 (11%), Positives = 58/170 (34%), Gaps = 9/170 (5%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ-------KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                  + +   +++       +       +  + I   +  +  +V    + +    +
Sbjct: 243 HEIDWTLSDLAADMRAPTPSAAAENVFPDRIELYKQIRHMKARLLSLVLHKCQQVSNLCE 302

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            ++A L  + +     +      I +L   +   ++  I S    ++ +   L + +   
Sbjct: 303 RQLARLQNILKNL--YLHPAGIEIARLTQNLSMNMNKIISSLKERLTHSAASLDALSPLK 360

Query: 457 TLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            L RG+ +    +   +     +A    + +   DG+ANA + +    +E
Sbjct: 361 CLSRGWITCLSKDGETVVSLSQVAVGDEVSLCMIDGRANAEITSIHFKEE 410


>gi|261366963|ref|ZP_05979846.1| exodeoxyribonuclease VII, large subunit [Subdoligranulum variabile
           DSM 15176]
 gi|282571081|gb|EFB76616.1| exodeoxyribonuclease VII, large subunit [Subdoligranulum variabile
           DSM 15176]
          Length = 407

 Score =  260 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 180/351 (51%), Gaps = 11/351 (3%)

Query: 17  VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V+ L++  K+++     L+ + V GE+SG+   + SGH YF+LKD ++ +  ++++    
Sbjct: 7   VTTLNHLAKNVLAQCEPLNDLIVCGEVSGFTRHYKSGHLYFTLKDENASVKCVMFRNQAR 66

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            + F P+ G+  L  G  T +     +Q+ ++ + P G+G    A +   KKL  EGLF+
Sbjct: 67  LLNFEPQNGMLVLAYGHATIYERDGAFQLYVDYMRPFGAGAAQMAFDALYKKLEAEGLFA 126

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            + K P+P +P  I V+TS TGA  +D+   I  R+P +++++ PV VQG E  + I   
Sbjct: 127 PERKRPLPPVPHCIGVVTSKTGAAWQDVQNVIGRRWPMVKLLLAPVNVQGLEAERSIVAG 186

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I  L+        PRP++I++ RGGGS EDLW FN E I R  A    P++SA+GHE D 
Sbjct: 187 IRALDR------DPRPELILVTRGGGSKEDLWIFNSERIAREAAACHKPVVSAVGHEIDT 240

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS--LL 311
           T+ DY  DLRAPTP+ AAE+ VP +  +   +  L+  + N I   I+   N      + 
Sbjct: 241 TILDYVVDLRAPTPSAAAELCVPDQAEVLQKISVLQRNIQNNIQNHIQICYNKYTMASVR 300

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +A  +  Q  +     L R    ++      I       +      +S   
Sbjct: 301 QAYQHQVQKTARFAQELKRASSLIQQAQRHQIALSDSALSAAAALAESLNP 351



 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 4/118 (3%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q++I+  ++ H++      K  +A +    +    +       +K+  + I+  
Sbjct: 270 QKISVLQRNIQNNIQNHIQIC--YNKYTMASVRQAYQHQVQKTARFAQELKRASSLIQQA 327

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             H+I    +++S    + +S      L RGYT +       +    +L    +I + 
Sbjct: 328 QRHQIALSDSALSAAAALAESLNPYGILARGYTIV--KRGGEVRPVEDLLPGQQIQVQ 383


>gi|262276799|ref|ZP_06054592.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium
           HIMB114]
 gi|262223902|gb|EEY74361.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium
           HIMB114]
          Length = 400

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 133/295 (45%), Positives = 176/295 (59%), Gaps = 11/295 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           + PE+SV+E S   K+I+E N S + VRGEIS  +     GH YF++KD +  ++++ W 
Sbjct: 3   NIPEFSVTEFSNLAKNILEENFSLIRVRGEISSVKNF--KGHLYFTIKDENFVLNSVCWA 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSK--YQIIIESLIPSGSGTLLTALEKRKKKLL 128
             +  ++  PE+GIE +  GKI+T+  SS   YQ+ +  +   G G LL  +E+RKKKL 
Sbjct: 61  SKVPYLQIQPEDGIEVIAEGKISTYAKSSISIYQLQVNQIEIKGEGALLKLIEQRKKKLE 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           EEGLF DQ+K  IP  PK I VITSPTGAVI DI+ RI  RFP  + ++PV VQG     
Sbjct: 121 EEGLFDDQNKKSIPVFPKNIGVITSPTGAVIMDIIDRIEARFPTNIKLYPVSVQGTNAVN 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E+   +             + D +I+ARGGG IEDL  FNDE +VR +     PIISAIG
Sbjct: 181 EVIAGLKFF-------ENNKVDTLIIARGGGGIEDLMPFNDENLVREVYKLKTPIISAIG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           HETD+TL D+ ADLRA TPT AAE AVP  +++      LE  L   I   I   
Sbjct: 234 HETDFTLLDFVADLRAATPTAAAEYAVPELKNILEKKSFLEKSLTQTISNFINNN 288



 Score = 63.6 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 2/131 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIE 428
           ++ILEK+  +E+ + Q +          +  ++ +      +  I     ++  ++  I 
Sbjct: 264 KNILEKKSFLEKSLTQTISNFINNNLRILKNMNSIFNSKVLRKIIHDNKKNLSLVMKSIN 323

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           F     IK  +  +     ++ +    + LKRG+  I+D N   I   + L     I I 
Sbjct: 324 FNSKSLIKMKYIELRRLGSLVSTLNIDDILKRGFVLIRDKNMRIIKNSKILKKNKNINIK 383

Query: 489 FFDGQANAIVI 499
           FFD    A + 
Sbjct: 384 FFDDDLFAEIK 394


>gi|304316763|ref|YP_003851908.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778265|gb|ADL68824.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 403

 Score =  259 bits (662), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 125/359 (34%), Positives = 206/359 (57%), Gaps = 13/359 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V +++ +LK IV S+  L H+ ++GEIS       +   YF+L D +S +  ++++  
Sbjct: 6   LTVKQVNDYLKSIVGSDIILKHIMIKGEISNLHFRGQA--LYFTLVDEYSSLKCVMFEEY 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           +N +    + G+  +  G+I+ +  S  +++++  +   G+G L  + EK K+KL  EGL
Sbjct: 64  VNDLNIDVKNGMSVIATGRISVYEKSGAFELLVSKIDVEGAGALFLSFEKLKQKLRNEGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K PIP  P  I VITSPTGA I DI+  +  R P + +++ P+ VQG     EI 
Sbjct: 124 FDSGKKKPIPKNPNKIGVITSPTGAAIHDIINILRRRKPSIDILVVPILVQGSSASLEIE 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI ++N           D+IIL RGGGS ED + FN+E + RAI NS IPIISA+GHET
Sbjct: 184 EAIKKVNRR------NDVDLIILGRGGGSFEDFYPFNEERVARAIYNSRIPIISAVGHET 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T+AD+ ADLRAPTP+ AAE+AV         + N +  L +  + +I  K + LNSL 
Sbjct: 238 DFTIADFVADLRAPTPSAAAELAVTDVNIYNEKIENYKRSLYHYAMSIIINKRHHLNSLK 297

Query: 312 KALPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           K++ + +  +     + RL+ L R +E ++  +I  K   +  +I+++ +   ++ +++
Sbjct: 298 KSIMSKNPIVKNQQLKIRLNSLNRIMEDSIYSVINNKKFKYISLIDKLNTLSPLNVLKR 356



 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 6/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +     +    + IE   +    Y       K   L+
Sbjct: 235 HETDFTIADFVADLRAPTPSAAAELAVTDVNIYNEKIENYKRSLYHYAMSIIINKRHHLN 294

Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            L++         +   L   +  L   +E  +   I +           L + +  N L
Sbjct: 295 SLKKSIMSKNPIVKNQQLKIRLNSLNRIMEDSIYSVINNKKFKYISLIDKLNTLSPLNVL 354

Query: 459 KRGYTSIQDTNN-NFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT   D +N   IT+  NL+   +I + F DG+A   V   
Sbjct: 355 KRGYTLTMDKDNVRPITKVENLSANDKIYVLFEDGEAKCTVNEV 398


>gi|320537232|ref|ZP_08037194.1| exodeoxyribonuclease VII, large subunit [Treponema phagedenis
           F0421]
 gi|320145907|gb|EFW37561.1| exodeoxyribonuclease VII, large subunit [Treponema phagedenis
           F0421]
          Length = 393

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 204/369 (55%), Gaps = 10/369 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
              YSV E++  +K ++E +LS   V+GEIS  +   S+GH YF+LKD+ + + A+++K 
Sbjct: 2   IKVYSVKEITAEIKALLEGSLSRCTVQGEISNCK-PSSTGHLYFALKDDKALLQAVMFKS 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L  + F P++G+   + G I+ +     YQII E +  +G G +L  LE+RK KLL EG
Sbjct: 61  KLWALNFEPKDGMLVQITGNISVYEQRGSYQIIAEKMQLAGEGDILRLLEERKNKLLREG 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF  + K  +PF PK IAVITSPTGA +RDI+  I+ R   + +++ P  VQG E    I
Sbjct: 121 LFDAEKKKTLPFFPKTIAVITSPTGAAVRDIINVITRRNQKVNILVLPAAVQGAEAAASI 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              +  +N            +II+ RGGGS+EDL  F+DE +VRAIA S+IP+ISA+GHE
Sbjct: 181 IAQLKIVN------VHKLASVIIVGRGGGSLEDLLPFSDEQVVRAIAESNIPVISAVGHE 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TDW L+DY ADLRAPTP+ AAE+A P+ + + +        L +++   I++    ++  
Sbjct: 235 TDWALSDYVADLRAPTPSAAAELAAPLLDDIINKFTEDREILISLMRARIEHIKLMISGF 294

Query: 311 L-KALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             + L    + +      R D     L  N    + +     N + + I+       + +
Sbjct: 295 DPETLEMKFRRIEQPFLLRFDDAKEALLRNFSSRLEKVRHKVNLLQHSIEGANPQTILNR 354

Query: 369 NRQHILEKQ 377
               + ++Q
Sbjct: 355 GYAIVRDEQ 363



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%)

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
                   +    S +++     V++    ++    +  L RGY  ++D     I    +
Sbjct: 313 RFDDAKEALLRNFSSRLEKVRHKVNLLQHSIEGANPQTILNRGYAIVRDEQGKTIRDASS 372

Query: 479 LATKTRILINFFDGQANAIV 498
           +  +T+++I    G   A V
Sbjct: 373 VPKRTKLIITPAKGSLEAEV 392


>gi|325680794|ref|ZP_08160332.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 8]
 gi|324107574|gb|EGC01852.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 8]
          Length = 396

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 118/361 (32%), Positives = 197/361 (54%), Gaps = 13/361 (3%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VS+L+  L   +  E     V V+GEI+ +   + +GHA+FS+KD  S I  +++ G
Sbjct: 3   VLTVSQLNKLLAFKIKQELKFKGVAVKGEIANFNVHYKTGHAFFSIKDESSSIRCVMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130
            + K++ LP +G+  LV+G    +      QI +  +   G  G +    E  K+KL ++
Sbjct: 63  RVKKLKALPADGMSVLVMGAADVYERDGICQINVTDIAVLGDEGIVHAQNELVKEKLKKQ 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPKE 189
           G+F    K PIP +PK +A++TS TGA ++DIL  +  R+PL V+ ++P  VQGD  P+ 
Sbjct: 123 GVFDRSRKKPIPLVPKKLAIVTSLTGAALQDILNVVGRRYPLCVVEVYPATVQGDTAPES 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +  A+   +           D IIL+RGGGS E L  FNDE +V A+A    P+ISA+GH
Sbjct: 183 VCRALYAADLS-------GADTIILSRGGGSAESLEAFNDESVVLAVAACKTPVISAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E + TL+DYAAD+RAPTP+ AAE+A P    + S+L  + ARL++ +   ++ ++  +  
Sbjct: 236 EINTTLSDYAADMRAPTPSAAAEIATPDISEMYSALSVMRARLDSSLGIYLRGRMIDVER 295

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +  + ++ S  RL  L + L   +E  +          +++++     + + 
Sbjct: 296 LDTRLRSVSPARRVNESEKRLSELEKHLRMLMENRLKICDMRLERGVSQLQMLSPFNVLN 355

Query: 368 K 368
           +
Sbjct: 356 R 356



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 55/134 (41%), Gaps = 3/134 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +    +   +  ++  +  +LR   ++ +     L  +      R+      + +L  
Sbjct: 264 ISEMYSALSVMRARLDSSLGIYLRGRMIDVERLDTRLRSV--SPARRVNESEKRLSELEK 321

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +  ++ +++K C   +      LQ  +  N L RGYT ++  ++  +T    L+    +
Sbjct: 322 HLRMLMENRLKICDMRLERGVSQLQMLSPFNVLNRGYTLVER-DDRAVTAACELSDGDAV 380

Query: 486 LINFFDGQANAIVI 499
            I F DG  +A++ 
Sbjct: 381 KIRFADGSVDAVIK 394


>gi|257791480|ref|YP_003182086.1| exodeoxyribonuclease VII, large subunit [Eggerthella lenta DSM
           2243]
 gi|257475377|gb|ACV55697.1| exodeoxyribonuclease VII, large subunit [Eggerthella lenta DSM
           2243]
          Length = 480

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 107/489 (21%), Positives = 178/489 (36%), Gaps = 60/489 (12%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS      K  +E     V + GE+S           YF++KD  + +  ++W     
Sbjct: 34  LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 91

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
                   G    + G+ T +    +    + S+  +G G L   +    +KL  EGL +
Sbjct: 92  ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 151

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
              K P+P  P ++ ++TSP GA + D+L+ +  RFPL RV++  V V+G   P  I   
Sbjct: 152 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 211

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +            +++++ RGGGS EDL  FNDE + R IA   +P+++ IGHE D 
Sbjct: 212 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 264

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           ++AD  ADLRA TPT AAE   P +E L        + L   + R +      +      
Sbjct: 265 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 324

Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
               D  L  +     LD     L   L   + R          R+ +  L  ++ ++R 
Sbjct: 325 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 383

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +  +++ +       +     +     A                               
Sbjct: 384 RLEHERERLASCGGALVPRFGQQAALAAAR------------------------------ 413

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
                            L   +    L RGY   +  +   +         T + +   D
Sbjct: 414 -----------------LHDLSPLAVLGRGYAIARTEDGAVVKSVEAAPPGTAVDVAVAD 456

Query: 492 GQANAIVIN 500
           G     V  
Sbjct: 457 GVLACRVEQ 465


>gi|146297125|ref|YP_001180896.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410701|gb|ABP67705.1| Exodeoxyribonuclease VII large subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 452

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 133/499 (26%), Positives = 202/499 (40%), Gaps = 66/499 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
            N +   E+SV EL+ +L+  VE +  L ++ ++GE+   R   S  H YF LKD    +
Sbjct: 4   DNIVSKKEWSVYELTSYLRKKVEMDILLKNIYLKGEV--IRPTLSGEHLYFELKDLEYDA 61

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
           ++  + +       +     G + LV G +  +      +I +  +   G G L   L++
Sbjct: 62  KVKCVYFWFDK---KIEVRHGTKVLVKGSVIFYEKEGIIEIKVSEITDIGLGELFVKLKQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181
            ++KL +EGLF  +HK  IP  PK I ++TS  GA +RDIL  I  +F  + V IF   V
Sbjct: 119 LEEKLKQEGLFDQKHKKEIPRYPKKIGIVTSKNGAAVRDILNTIYSKFENIEVYIFNCSV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG   P EI   I   N +         ++II+ RGGG+ EDL  FNDEM+VR I  S I
Sbjct: 179 QGQNAPYEICEGIEYFNNILP------VEVIIVGRGGGAFEDLMAFNDEMVVRKIFESKI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D+ L D+ ADLRA TPT A E+ V  +      L     ++ N+I + I+
Sbjct: 233 PVISAVGHERDYVLTDFVADLRAITPTNAGEIVVSFQNKALEKLDEYCRKIKNLISKKIE 292

Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                L   L  L        L+      D L  +L   L   +     +   +  R+  
Sbjct: 293 SSREDLKLQLYRLYQNSPSNKLTKLAQDADLLSSKLTFLLNKKLHHISSNLKILEKRLSV 352

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                   K +       + +    K   +                              
Sbjct: 353 SGPYVRFAKAKNDYEMLLKRLNIAFKNFCQ------------------------------ 382

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
                                   I    L +    N LKRGY+     N+  +T  R +
Sbjct: 383 -----------------KKEFEFKIKVEKLIALNPLNILKRGYSVTIH-NSKVLTTVRVV 424

Query: 480 ATKTRILINFFDGQANAIV 498
           +    I+    DG   + V
Sbjct: 425 SIGDEIVTRITDGIIKSKV 443


>gi|323705300|ref|ZP_08116875.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535202|gb|EGB24978.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 407

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 127/367 (34%), Positives = 214/367 (58%), Gaps = 13/367 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V +++ +LK+IV  +  L HV V+GEIS       +   YF+L D +S +  ++++  
Sbjct: 6   LTVKQVNDYLKNIVAGDIILKHVMVKGEISNLHFRGQA--LYFTLVDEYSSLKCVVFEDY 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           ++ I    + G+  +V GK+  +  SS +Q+ + ++   G G+L  + E+ K+KL  EGL
Sbjct: 64  IDNINVEVKNGMSVIVTGKVYVYEKSSSFQLHVFNIEVEGLGSLFLSFERLKQKLKSEGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K  +P  PK +AVITSP+GA + DI+  +  R P + +++ P+ VQG++   EI 
Sbjct: 124 FDLDKKKNLPKNPKKVAVITSPSGAAVHDIINILRRRKPSIDIMMVPILVQGNKASSEIV 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           +AI+++N   +       D+IIL RGGGS EDL+ FNDE++ RAI NS IP+ISA+GHET
Sbjct: 184 DAIIKVNKRSD------IDLIILGRGGGSFEDLYPFNDEIVARAIYNSRIPVISAVGHET 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D+T++D+ ADLRAPTP+ AAE+AV         + N    L   ++ +I  K + L++L 
Sbjct: 238 DFTISDFVADLRAPTPSAAAELAVTDVNFYNEKIKNYRRSLYRYMLSIIDKKRHRLDNLK 297

Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           K L   N        + RLD L R +E ++  I+  K   + ++I ++ +   ++ +++ 
Sbjct: 298 KLLIGKNPIIKNRQMKERLDTLNRIMEDSIYKILRDKKLQYVNLIEKLNTLSPLNVLKRG 357

Query: 370 RQHILEK 376
               ++K
Sbjct: 358 YTMTMDK 364



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEF 429
              EK ++  + + +++  I  +K+ ++  L  L   +    +   +   +  L   +E 
Sbjct: 266 FYNEKIKNYRRSLYRYMLSIIDKKRHRLDNLKKLLIGKNPIIKNRQMKERLDTLNRIMED 325

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILIN 488
            +   ++            L + +  N LKRGYT   D + NN +T+  +++   +I + 
Sbjct: 326 SIYKILRDKKLQYVNLIEKLNTLSPLNVLKRGYTMTMDKDKNNLVTKANDISADDKIYLL 385

Query: 489 FFDGQANAIVINK 501
           F DG+A   V   
Sbjct: 386 FEDGEALCTVNEV 398


>gi|183221244|ref|YP_001839240.1| exodeoxyribonuclease VII large subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911335|ref|YP_001962890.1| exodeoxyribonuclease VII large subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167776011|gb|ABZ94312.1| Exodeoxyribonuclease VII, large subunit [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167779666|gb|ABZ97964.1| Exodeoxyribonuclease VII large subunit (Exonuclease VII large
           subunit) [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Paris)']
          Length = 431

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 117/369 (31%), Positives = 178/369 (48%), Gaps = 11/369 (2%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVSE++  +K  ++      +  VRGEIS Y   +SSGH YFSLKD  S I    +   
Sbjct: 8   LSVSEVNRRIKAKLQDAPEFKNFWVRGEISNYSQTNSSGHMYFSLKDTTSVIKCAFFSYQ 67

Query: 73  LNKIE-FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               +      G+E LV G ++ +     Y I ++ +   G G +L  +EK KK L E+G
Sbjct: 68  AKNYKGTPLRNGMEILVYGSVSVYEPGGYYSITVQKIEELGEGDILLRIEKLKKTLAEKG 127

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F   HK P+P  PK + ++TSP GA + DI++  +   P +++++ P  VQGD     I
Sbjct: 128 IFDASHKRPLPKFPKRLGIVTSPKGAAVEDIIRIATDLNPSIQILVSPCLVQGDGAENSI 187

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             AI ++N           D+II  RGGGS EDL  FN E +V A   S +PIISA+GHE
Sbjct: 188 IEAIKEIN-----DPKWEVDVIIAGRGGGSFEDLMAFNQESVVMAYYQSRLPIISAVGHE 242

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL--N 308
            D  L D AAD   PTPT AA++A+P        L  +E RL + +  +I+         
Sbjct: 243 IDRVLTDLAADATTPTPTAAAKLAIPNVSDTLIRLDEMEDRLRSALTGVIRIGKEKWFGV 302

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           +    L N    L   +   D +  ++    +  + +K   F       ++         
Sbjct: 303 TNRAVLQNPKSILEPRQNHFDEIITKISLLGKNYLVKKQSEFQKFEVFHQNWKSYLERVH 362

Query: 369 NRQHILEKQ 377
           N+  + E++
Sbjct: 363 NKFRLAEQR 371



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 23/207 (11%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N +  +         +   + H ++ ++               +   I N+      + E
Sbjct: 220 NQESVVMAYYQSRLPIISAVGHEIDRVLTDLAADATTPTPTAAAKLAIPNVSDTLIRLDE 279

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-------- 427
            +  +   +   +R    +          + +  K+ +     H  ++IT+I        
Sbjct: 280 MEDRLRSALTGVIRIGKEKWFGVTNRA--VLQNPKSILEPRQNHFDEIITKISLLGKNYL 337

Query: 428 -------------EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                               ++  H    +  + L  F+   TLKRGY+ +++TN   I+
Sbjct: 338 VKKQSEFQKFEVFHQNWKSYLERVHNKFRLAEQRLDHFSPLGTLKRGYSVLRNTNKQVIS 397

Query: 475 QKRNLATKTRILINFFDGQANAIVINK 501
             + +     + +  FDG+    V   
Sbjct: 398 SVKQIQKNETLEVFLFDGKLQVEVKET 424


>gi|330507795|ref|YP_004384223.1| exodeoxyribonuclease VII, large subunit [Methanosaeta concilii
           GP-6]
 gi|328928603|gb|AEB68405.1| exodeoxyribonuclease VII, large subunit [Methanosaeta concilii
           GP-6]
          Length = 401

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 117/363 (32%), Positives = 198/363 (54%), Gaps = 17/363 (4%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              ++V+ L+  ++  +E++  L  +  +GE+S +   H SGH YF+LKD  S+I  +++
Sbjct: 2   TQIFTVTNLNERIRERLENDPRLHDLWAQGEVSNFVH-HRSGHMYFTLKDRDSQISCVLF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKRKKKLL 128
           KG + ++E     G+  L+ G +  +    + Q++  ++   +G G      E  KKKL 
Sbjct: 61  KGNIGQVETELRNGMNVLLFGDVAVYRPQGRVQLVARAIKRDAGLGFRFLQFEALKKKLG 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           EEGLF  + K P+P  P+ I ++TS  GA +RD+++ I   +P R+II P +VQG++  +
Sbjct: 121 EEGLFDQEQKRPLPLYPERIGIVTSLQGAALRDVVRTIG-PYPARIIISPARVQGEKAEE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I +A+L L          R D+II+ RGGGS EDLW FN E++ RA+     P+ISA+G
Sbjct: 180 SIVSALLAL--------QGRTDLIIVCRGGGSAEDLWCFNSEVVARAVFACDSPVISAVG 231

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD T+ D+AAD+RA TPT AA++AVP    L+  L   + R+   +   ++ K   L 
Sbjct: 232 HETDVTITDFAADMRAATPTAAAKIAVPDVADLKIRLEQSQVRIMRALWTSLERKEERLE 291

Query: 309 SLLKALPNSDQTLS---CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            + ++L +  +  S     R RLD L   L+     ++  +    +    ++ +      
Sbjct: 292 YIQRSL-SPSRMYSITGDLRQRLDHLSDGLDLAQAEMLKARKTRLDAAKGKLAAVGPRAT 350

Query: 366 IQK 368
           +Q+
Sbjct: 351 LQR 353



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 50/152 (32%), Gaps = 6/152 (3%)

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-- 411
              +++       +     + + +  +EQ   + +R ++   + K   L  ++       
Sbjct: 242 AADMRAATPTAAAKIAVPDVADLKIRLEQSQVRIMRALWTSLERKEERLEYIQRSLSPSR 301

Query: 412 ---RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                  L   +  L   ++   +  +K+  T +      L +   + TL+RGY  ++  
Sbjct: 302 MYSITGDLRQRLDHLSDGLDLAQAEMLKARKTRLDAAKGKLAAVGPRATLQRGYALVRSK 361

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVIN 500
               +    ++     + +    G     ++ 
Sbjct: 362 KGLVV-AWDDVLPGEEVELILGRGALRCRILE 392


>gi|167750988|ref|ZP_02423115.1| hypothetical protein EUBSIR_01973 [Eubacterium siraeum DSM 15702]
 gi|167656167|gb|EDS00297.1| hypothetical protein EUBSIR_01973 [Eubacterium siraeum DSM 15702]
          Length = 406

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 116/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS+++  L  IV  +  L+ + V GEIS +    +SGH YF+LKD  + I  +++ G  
Sbjct: 8   TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P  G   +V G +  +      QI +  +I  G G L  A E+ K++L   G F
Sbjct: 68  RSLDFTPYSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEQAKRELEAGGYF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
               K PIP  PK + +IT+  GA ++D+L  I+ R P+  V+  PV VQG   P  +  
Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+               D+II+ RGGGS EDL  FND    +A+ NS IP ISA+GHETD
Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311
           +T++D+ AD RAPTP+ AAE+A  V     S  I L   RL++II          ++S+ 
Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSDIIHSKTDSYEQLIDSIQ 298

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + +   +  Q +  S   L  +  ++    + +I +     ++  ++I++   I+ +++
Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
             H+       RI      +  +  +I       I      +   +  +++ +  N LKR
Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           GY+++   NN+ +    ++     + I F DG A A +       ++
Sbjct: 358 GYSAVT-KNNSAVNSIGDIEQNDTVEILFADGTATAQIKEIHENNKE 403


>gi|325831438|ref|ZP_08164692.1| exodeoxyribonuclease VII, large subunit [Eggerthella sp. HGA1]
 gi|325486692|gb|EGC89140.1| exodeoxyribonuclease VII, large subunit [Eggerthella sp. HGA1]
          Length = 475

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 107/489 (21%), Positives = 178/489 (36%), Gaps = 60/489 (12%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS      K  +E     V + GE+S           YF++KD  + +  ++W     
Sbjct: 29  LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 86

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
                   G    + G+ T +    +    + S+  +G G L   +    +KL  EGL +
Sbjct: 87  ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 146

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
              K P+P  P ++ ++TSP GA + D+L+ +  RFPL RV++  V V+G   P  I   
Sbjct: 147 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 206

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +            +++++ RGGGS EDL  FNDE + R IA   +P+++ IGHE D 
Sbjct: 207 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 259

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           ++AD  ADLRA TPT AAE   P +E L        + L   + R +      +      
Sbjct: 260 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 319

Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
               D  L  +     LD     L   L   + R          R+ +  L  ++ ++R 
Sbjct: 320 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 378

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +  +++ +       +     +     A                               
Sbjct: 379 RLEHERERLASCGGALVPRFGQQAALAAAR------------------------------ 408

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
                            L   +    L RGY   +  +   +         T + +   D
Sbjct: 409 -----------------LHDLSPLAVLGRGYAVARTEDGAVVKSVEAAPPGTAVDVAVAD 451

Query: 492 GQANAIVIN 500
           G     V  
Sbjct: 452 GVLACRVEQ 460


>gi|168335573|ref|ZP_02693636.1| exodeoxyribonuclease VII, large subunit [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 405

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 181/364 (49%), Gaps = 14/364 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +D     + EL++++  I+  +  L+ + +R EIS     H SGH YFSLKD ++ I A+
Sbjct: 1   MDRKIIGIGELNHYVAAILHEDYILNSIWLRAEISNLT-YHKSGHLYFSLKDENAGIQAV 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++    +++ F   +G++ LV  +I  +     YQ  +  +   G GTL +   + K  L
Sbjct: 60  MFSQYASQLNFQLVDGMKVLVRCQIGLYEKVGNYQAYVYEIEQEGLGTLYSQFLELKSTL 119

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186
            ++G F      P+   P  + +ITS TGA I DI++    R   + + I+P  VQG   
Sbjct: 120 EQKGYFD--KHQPLAKYPAAVGIITSKTGAAIXDIIRVGRRRNKTIPIYIYPASVQGQYA 177

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             EI  AI + N           D+IIL RGGGSIEDLW FN+  +  AI NS IPI+ A
Sbjct: 178 QNEIVWAIEKANA------DAIVDVIILGRGGGSIEDLWCFNELAVALAIYNSKIPIVCA 231

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHE   T++D+ AD RA TP+ AAE+  P      ++L      L+NI+   ++     
Sbjct: 232 VGHEIXXTISDFVADHRAATPSAAAEIVFPNLXDTVATLKYHIRTLDNIMKTKVRECEVN 291

Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           LN L+      +  +        LD L  +L   ++ I+ +K    N  + +I+    I 
Sbjct: 292 LNDLINRPIFKDKTKMYLQKIQELDLLAEDLNERIQDILHQKKMELNLNLKQIEKLSPIA 351

Query: 365 NIQK 368
            I +
Sbjct: 352 TILR 355



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 51/138 (36%), Gaps = 2/138 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +    + ++ I+K  +R   +   + I     + +            +  L   +   + 
Sbjct: 270 LKYHIRTLDNIMKTKVRECEVNLNDLINR--PIFKDKTKMYLQKIQELDLLAEDLNERIQ 327

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +      +++  + ++  +   T+ RG+  +  ++ + ++    +A    + I   +G
Sbjct: 328 DILHQKKMELNLNLKQIEKLSPIATILRGFGMVTSSSGHVVSNVDKIAIGDDLDIRVANG 387

Query: 493 QANAIVINKAPPKEQPTK 510
              + VI+K    ++  K
Sbjct: 388 NIISKVISKQKDIKEKVK 405


>gi|237741998|ref|ZP_04572479.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 4_1_13]
 gi|229429646|gb|EEO39858.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 4_1_13]
          Length = 404

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 122/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+K  
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +    L N   T++  R  +     +L+  +E  +  K   F + I+++     I+ 
Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQIKNKRID 370



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                   +   + I  L   I +   +++  +   ++            L      NTL
Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|34763130|ref|ZP_00144099.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887193|gb|EAA24295.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 404

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 122/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+K  
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKEGLLEDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +    L N   T++  R  +     +L+  +E  +  K   F + I+++     I+ 
Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQIKNKRID 370



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKEGLLEDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                   +   + I  L   I +   +++  +   ++            L      NTL
Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|291557467|emb|CBL34584.1| exodeoxyribonuclease VII, large subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 406

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS+++  L  IV  +  L+ + V GEIS +    +SGH YF+LKD  + I  +++ G  
Sbjct: 8   TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P  G   +V G +  +      QI +  +I  G G L  A E+ K++L   G F
Sbjct: 68  RSLDFTPFSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEQAKRELEAGGYF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
               K PIP  PK + +IT+  GA ++D+L  I+ R P+  V+  PV VQG   P  +  
Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+               D+II+ RGGGS EDL  FND    +A+ NS IP ISA+GHETD
Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311
           +T++D+ AD RAPTP+ AAE+A  V     S  I L   RL+NII          ++S+ 
Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSNIIHSKTDSYEQLIDSIQ 298

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + +   +  Q +  S   L  +  ++    + +I +     ++  ++I++   I+ +++
Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
             H+       RI      +  +  +I       I      +   +  +++ +  N LKR
Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           GY+++   NNN +    ++     + I F DG A A +       ++
Sbjct: 358 GYSAVT-KNNNAVNSIGDIEQNDTVEIIFADGTATAQIKEIHENNKE 403


>gi|153951694|ref|YP_001398624.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|166232349|sp|A7H544|EX7L_CAMJD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|152939140|gb|ABS43881.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 387

 Score =  256 bits (654), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+  +K ++ES   ++ + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TVSELNLKVKALLESYFENIILSGEISKIT-LHGSGHWYFDLKDEKSSISCAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +  S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGDFLELCGSVSLYAESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LRKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ +D RAPTP+ A +     K  ++ SL  +E +L  +    ++   N L +L K 
Sbjct: 234 VISDFVSDFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLIQLWNHKMQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|291531065|emb|CBK96650.1| exodeoxyribonuclease VII, large subunit [Eubacterium siraeum 70/3]
          Length = 406

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           +VS+++  L  IV  +  L+ + V GEIS +    +SGH YF+LKD  + I  +++ G  
Sbjct: 8   TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++F P  G   +V G +  +      QI +  +I  G G L  A EK K++L   G F
Sbjct: 68  RSLDFTPYSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEKAKRELEAGGYF 127

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
               K PIP  PK + +IT+  GA ++D+L  I+ R P+  V+  PV VQG   P  +  
Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+               D+II+ RGGGS EDL  FND    +A+ NS IP ISA+GHETD
Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311
           +T++D+ AD RAPTP+ AAE+A  V     S  I L   RL++II          ++S+ 
Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSDIIHSKTDSYEQLIDSIQ 298

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + +   +  Q +  S   L  +  ++    + +I +     ++  ++I++   I+ +++
Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKSSVLLDNYSDKIEALSPINVLKR 357



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 1/108 (0%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
             H+       RI      +  +  +I       I      +   +  +++ +  N LKR
Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKSSVLLDNYSDKIEALSPINVLKR 357

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           GY+++   NN+ +    ++     + I F DG A A +       ++ 
Sbjct: 358 GYSAVT-KNNSAVNSIGDIEQNDTVEILFADGTATAQIKEIHENNKER 404


>gi|255263778|ref|ZP_05343120.1| exodeoxyribonuclease VII, large subunit [Thalassiobium sp. R2A62]
 gi|255106113|gb|EET48787.1| exodeoxyribonuclease VII, large subunit [Thalassiobium sp. R2A62]
          Length = 424

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 142/431 (32%), Positives = 213/431 (49%), Gaps = 14/431 (3%)

Query: 98  SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGA 157
            SK+ +  + L  +G G  +  LEKRKK L  EGLF +  K P+P++P II V+TS  G 
Sbjct: 7   QSKFSLNAQRLSVAGEGAFMALLEKRKKMLAAEGLFDEGRKKPLPYLPDIIGVVTSTQGV 66

Query: 158 VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217
           VIRDIL R+  RFP +V+++PV VQG     ++A AI   N L  G   PRPD+II+ARG
Sbjct: 67  VIRDILHRLRDRFPRKVLVWPVAVQGQSSKDQVAAAIAGFNALTPGGALPRPDLIIVARG 126

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV 277
           GGSIEDLW FN+E++ RA A S IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV
Sbjct: 127 GGSIEDLWSFNEEVVARAAAASDIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPV 186

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
           +  L + +   EARL   + + +  +   L  L +ALPN +  L+  R R D   + +  
Sbjct: 187 RLDLLAWVSEQEARLKRALSQGVAQREQRLRDLARALPNLESLLANPRQRYDITSQRMTD 246

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
            L      K +        ++   L +  Q  R+ + +  + +   + + L         
Sbjct: 247 ALLRAAQLKRQKLTETSGALRPSVLTNRTQNERRRVNDLGRQLAPSLARTLTRPTDRLSN 306

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
             A L         ++      + +L  R      +++++    +    R+  S  YK T
Sbjct: 307 LAARLTT--RNPSAQLDRQRADLDRLSQRFATRGQNQLETARQKLDALERVRNSVGYKQT 364

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           LKRGY  ++  +   +T  +     + + I F DG                    +    
Sbjct: 365 LKRGYAVVRG-DGAPVTTAKAAKAASSLEIEFQDGTV-----------SPSGASSKPAKK 412

Query: 518 KREKQGTQGEL 528
            + +   QG L
Sbjct: 413 PKPEPPEQGSL 423


>gi|309806413|ref|ZP_07700422.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 03V1-b]
 gi|308167195|gb|EFO69365.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners
           LactinV 03V1-b]
          Length = 375

 Score =  255 bits (652), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 190/356 (53%), Gaps = 9/356 (2%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           +  V ++GE+S +R   +S   YFSLKD  S+I+A+++K    K++F   EG++  V G 
Sbjct: 1   MHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAVMYKSFFEKVKFKLVEGMKVYVSGY 59

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
           I  +     YQ  + ++ P+G G L   L + ++KL +EGLF+D HK  IP  P  IAV+
Sbjct: 60  IDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKLDKEGLFADSHKKKIPKFPDKIAVV 119

Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           TS +GAVI DI+   + RFP + + +FP  VQG +    I  ++ Q+       +  + D
Sbjct: 120 TSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDAAASIIASLQQIAA-----SQDKYD 174

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
           ++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS++GHETD TL+D  AD RA TPT A
Sbjct: 175 VVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISSVGHETDTTLSDLVADKRAATPTAA 234

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRL 328
           AE A P    +   +I L   L   I  +I       N       L    +        L
Sbjct: 235 AEYATPELSAITLQIIELRTHLYAAIRSIINSDKILFNRTKNSVFLREPQRFYDEKMQTL 294

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
           D L ++LE      +      +  +   + S      I+ + Q ++ K Q++ + +
Sbjct: 295 DLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQIIKHHYQELIFKTQNLNKSM 350


>gi|19704401|ref|NP_603963.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|296328246|ref|ZP_06870776.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|22095661|sp|Q8REN3|EX7L_FUSNN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|19714657|gb|AAL95262.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|296154646|gb|EFG95433.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 404

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 125/376 (33%), Positives = 190/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I  + +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCVAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +     +Q++   +      G+L   LEK K+KL 
Sbjct: 61  NYKLKRIPEDLKEGDLVKLFGDVGFYEARGDFQVLARYIEKQNALGSLYAKLEKVKEKLT 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
             G F+++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 GLGYFNEEHKKDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN +KE       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIKE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDSMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L      L N   T++  R  +     +L+  +E  I +K   F + I++I     I+ 
Sbjct: 295 LLRIENYYLKNFPNTVNSLRESIVEKEIQLKEAMESFIEQKRNIFENKIDKISVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQVKNKRID 370



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDSMKRELL 295

Query: 400 AIL-HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             + +   +   N +  L   I +   +++  +   I+            +      NTL
Sbjct: 296 LRIENYYLKNFPNTVNSLRESIVEKEIQLKEAMESFIEQKRNIFENKIDKISVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  ++V  K
Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMMTILKDGKVISVVKEK 397


>gi|260494676|ref|ZP_05814806.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_33]
 gi|260197838|gb|EEW95355.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_33]
          Length = 404

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 192/376 (51%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I  + +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCVAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+KL 
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEKHKRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E+++P KE+L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSIPEKENLLEDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L      L N   T++  R  +     +L+  +E  + +K   F   I++I     I+ 
Sbjct: 295 LLRVENYHLKNFPSTINNLRESIVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQIKNKRID 370



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSIPEKENLLEDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +     +   + I  L   I +   +++ I+   +             +      NTL
Sbjct: 296 LRVENYHLKNFPSTINNLRESIVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|317050954|ref|YP_004112070.1| exodeoxyribonuclease VII large subunit [Desulfurispirillum indicum
           S5]
 gi|316946038|gb|ADU65514.1| exodeoxyribonuclease VII, large subunit [Desulfurispirillum indicum
           S5]
          Length = 469

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 115/525 (21%), Positives = 200/525 (38%), Gaps = 62/525 (11%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M P  +  S     YSV      ++  ++    ++ VRGE+    G  + GH Y +LK+ 
Sbjct: 1   MLPSVESTS----VYSVCAFLTRVRFGLKREFRNIRVRGEVFACNGSAA-GHLYITLKEG 55

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           +  +    ++   + +      G      G +  +  +S +Q++   +   G G L  A 
Sbjct: 56  NESLQVAYFRNHHHGLA-KISRGDLVECQGYVDIY--NSTFQMVASRVEVQGDGRLFEAF 112

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPV 179
            K K +L ++G F   HK  IP  P+ IA+ITS +GA ++DIL   S   + L + I  V
Sbjct: 113 AKLKAELEKKGYFDKIHKKAIPAFPQRIALITSESGAALQDILSTASDVLYCLDITIHHV 172

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +I  AI               D+++L RGGGS  DL  FN + I  AI  S
Sbjct: 173 SVQGQVAVGQICEAIA-------AAQSADYDLLVLCRGGGSALDLQPFNSQEIAEAIFRS 225

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P+ISA+GHETD ++ D  ADLR  TPT    +              ++ RL     R+
Sbjct: 226 RLPVISAVGHETDLSICDLVADLRVETPTAFGHLLATP-------FRQIQERLRRAQQRM 278

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
              + N L      L              +R  R++   L   + R       +  ++  
Sbjct: 279 TWLQQNQLTRNTAIL--------------ERHERDITLALRRTLDRSTFGLESLSAKLDK 324

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +   +Q       H+ ++                          ++R+ +L   
Sbjct: 325 I-LERRVTHLQQKTEYLGNHLHRL------------------------SPQSRVEHLEHQ 359

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
              L  R+E  +   +      +     +L++ + +  L+RGY+ +   +       R+L
Sbjct: 360 CSLLRHRLENRMQASLDISQHRLGRCCDLLETLSPRKVLQRGYSVLLQADGTVAHNARDL 419

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524
                +      G     + +     +      Q    K +K+  
Sbjct: 420 HPGEPLTGILHRGTLKLTITHILEDTDGSNSHDQNRPGKSQKRAG 464


>gi|256845338|ref|ZP_05550796.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp.
           3_1_36A2]
 gi|256718897|gb|EEU32452.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp.
           3_1_36A2]
          Length = 404

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+K  
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEIRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L        N   T++  R  +     +L+ ++E  +  K   F + I+++     I+ 
Sbjct: 295 LLRVENYHFKNFPSTINNLRESIVEKEIQLKESMESFLEHKRNIFENKIDKLSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQIKNKRID 370



 Score = 70.6 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +     +   + I  L   I +   +++  +   ++            L      NTL
Sbjct: 296 LRVENYHFKNFPSTINNLRESIVEKEIQLKESMESFLEHKRNIFENKIDKLSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|226227275|ref|YP_002761381.1| exodeoxyribonuclease VII large subunit [Gemmatimonas aurantiaca
           T-27]
 gi|226090466|dbj|BAH38911.1| exodeoxyribonuclease VII large subunit [Gemmatimonas aurantiaca
           T-27]
          Length = 396

 Score =  255 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 8/325 (2%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           SV +L+   K ++E     + VRGE++ ++  H +GH YFSL+D +++++ +IW     +
Sbjct: 14  SVHDLTSAAKDLIEGAFPPLWVRGEVTNFKA-HRNGHWYFSLRDANAQVNCVIWSSATRR 72

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           I   P+EG++ L +G++T +P     Q  +  L   G G    ALE+ + +L  +GL + 
Sbjct: 73  IPAQPDEGMQVLALGQMTVWPVRGDLQFSVRQLEAEGDGLWRKALEQSRLRLERDGLLTA 132

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAI 194
           + K  +P  P+ IAVITSP GA +RD++     R   + +++ P KVQG+     + +A+
Sbjct: 133 ERKRRLPAFPRRIAVITSPDGAALRDVITVSRARSADVELVVVPAKVQGEGAADSLIDAL 192

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            ++            D++I+ RGGGS EDLW FNDE + RA+A   +P ISA+GHE D +
Sbjct: 193 ERV------GRWGGADLVIIGRGGGSREDLWAFNDERLARALAACPVPTISAVGHEVDIS 246

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D  AD+RA TP+ AAE+AVP +  L + +  L  RL +  +R     + +L  + K L
Sbjct: 247 LCDLVADVRAATPSAAAEIAVPSRRELAARVDALGNRLASAAVRRQDRAVASLVQVRKRL 306

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNL 339
             +   L   R             L
Sbjct: 307 ALTATRLVDRRRGRIETLAGQLEAL 331



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 13/134 (9%), Positives = 39/134 (29%)

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +  +           A+ + L      R       + ++  R+    +  +      
Sbjct: 261 AAAEIAVPSRRELAARVDALGNRLASAAVRRQDRAVASLVQVRKRLALTATRLVDRRRGR 320

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +      L++ +   TL RG+   +  +   ++++   A      +   DG   A     
Sbjct: 321 IETLAGQLEALSPLATLARGFGVARGPDGATLSRRAQFAPGASFELWLQDGIVEATAGAS 380

Query: 502 APPKEQPTKKCQLH 515
               ++  ++    
Sbjct: 381 KALPDERMERTNRE 394


>gi|221066471|ref|ZP_03542576.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           KF-1]
 gi|220711494|gb|EED66862.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           KF-1]
          Length = 445

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 114/391 (29%), Positives = 203/391 (51%), Gaps = 15/391 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              +     + V  L + +   +++  + V VRGE+SG+    +SGH YF+LKD   +I 
Sbjct: 5   SNPAATQHVWEVGALCHAIGDALQARFNPVSVRGELSGF-SRAASGHCYFNLKDASGQIR 63

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +++    ++ F   +G    V G++  +      Q+++ES+  +G G L     + K 
Sbjct: 64  CAMFRRAAEQVGFSARDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKA 123

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGD 184
           +L  EGLF    K P+P +P+ I ++TS   A + D++  +  R   + V++ P  VQG 
Sbjct: 124 QLESEGLFDPARKRPLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVVVPALVQGA 183

Query: 185 ECPKEIANAILQLNTLKEGRT------------CPRPDIIILARGGGSIEDLWHFNDEMI 232
           + P+ +  A+ +L  L +                P  D I+L RGGGS+EDLW FNDE +
Sbjct: 184 QAPQSLVQALSKLYRLAQEGQGPSSNLPADSARQPVIDTILLVRGGGSLEDLWAFNDEQL 243

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            R I  S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+    +E    +L  ++ RL
Sbjct: 244 ARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGALGLMQDRL 303

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
           +N + R++  +   L+   + L    + L+ ++ +L+R  + L H + + + R  ++   
Sbjct: 304 DNAVQRVMDRQAQRLDIAAQRLGRPSEQLTRNQLQLNRQAQRLRHAMLLKLQRLAQNQQA 363

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
           +     S F   N+++ +Q +      ++ +
Sbjct: 364 LQVNFSSIF-QRNLEQQKQTLDRIDLRLQLL 393



 Score = 96.0 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 4/148 (2%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           ++     + +   + +  Q +    Q + +  +Q  R      ++       LR     +
Sbjct: 298 LMQDRLDNAVQRVMDRQAQRLDIAAQRLGRPSEQLTRNQLQLNRQ----AQRLRHAMLLK 353

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +  L  + + L      I    ++    ++      LQ    +  L+RGY  + D     
Sbjct: 354 LQRLAQNQQALQVNFSSIFQRNLEQQKQTLDRIDLRLQLLDPRLVLQRGYALLTDEQGRA 413

Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500
           +TQ R       +     DG  + +V  
Sbjct: 414 VTQVRQAVPGAALKAQLSDGAVDVVVTQ 441


>gi|315638798|ref|ZP_07893970.1| exodeoxyribonuclease VII large subunit [Campylobacter upsaliensis
           JV21]
 gi|315481016|gb|EFU71648.1| exodeoxyribonuclease VII large subunit [Campylobacter upsaliensis
           JV21]
          Length = 387

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+   K ++ES+  ++ V GE+S     HSSGH YF LKD  S I  +++KG   K
Sbjct: 2   TVSELNLSAKALLESHFDNIFVSGELSKITM-HSSGHWYFELKDQCSSIACVMFKGNNFK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P+ G    + G ++ +  S +YQ I +S+   G G L       K+ L +EGLF +
Sbjct: 61  LGFEPKIGDFLELEGNLSLYAESGRYQFIAKSMKKEGFGDLEARFLALKESLQKEGLFDE 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
            HK  +P  P  I +ITS T A + D+L+ I+ +  F  ++ +F    QG   P  +  A
Sbjct: 121 IHKKNLPKFPLKIGIITSFTSAALEDMLKIITQKAYFLAKIYVFNALTQGQNAPFSLIKA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE++ R I  +  PIISAIGHE D+
Sbjct: 181 LKKADAI-------GLDVLIMARGGGSREDLFCFNDEVLAREIFAAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ ADLRAPTP+ A  + +P KE L+  L  +E +L    + + K   N L++L K 
Sbjct: 234 VISDFVADLRAPTPSAAINILLPSKEDLEQKLDFIEDKLKTSFMIICKNLENKLSNLEKI 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +    +      L+ L ++L+  ++  I   +  F  + N     
Sbjct: 294 FKANSLPLMIEQKIKHLESLKKQLDLLIKNKIQISFLEFEKLKNAYLQH 342


>gi|237744894|ref|ZP_04575375.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 7_1]
 gi|229432123|gb|EEO42335.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 7_1]
          Length = 404

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+KL 
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEKHKRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFDSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L      L N   T++  R  +     +L+  +E  + +K   F   I++I     I+ 
Sbjct: 295 LLRVENYHLKNFPNTINNLRESVVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQVKNKRID 370



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +     +   N I  L   + +   +++ I+   +             +      NTL
Sbjct: 296 LRVENYHLKNFPNTINNLRESVVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|222824344|ref|YP_002575918.1| exodeoxyribonuclease VII, large subunit [Campylobacter lari RM2100]
 gi|254783693|sp|B9KDM8|EX7L_CAMLR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|222539565|gb|ACM64666.1| exodeoxyribonuclease VII, large subunit [Campylobacter lari RM2100]
          Length = 387

 Score =  253 bits (646), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 12/348 (3%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           VSEL+   K ++E +L  + + GEIS    IH SGH YF LKD  S I  +++KG    +
Sbjct: 3   VSELNLKAKSLLEFHLDDIELSGEISKIT-IHGSGHWYFDLKDEKSSIACVMFKGFNQFV 61

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
           +  P+ G    + G ++ +  S +YQ I +S+  +  G L       K+KL +EGLF   
Sbjct: 62  QTQPKVGDMLDLRGYVSLYEASGRYQFIAKSMQKTSLGDLEAKFLALKEKLEKEGLFDIN 121

Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANAI 194
            K  I   PK I +ITS T A ++D+L+ IS +     ++ IF    QG   P  + NA+
Sbjct: 122 AKKSIVKFPKKIGIITSFTSAALQDMLKLISQKEYNLCKITIFNALTQGQSAPNSLINAL 181

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            + N           D IILARGGGS EDL+ FNDE + R I +   P++SAIGHE D+ 
Sbjct: 182 KKANE-------YDLDAIILARGGGSREDLFCFNDEELARCIFSLKTPVVSAIGHEIDYV 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK-- 312
           ++D+ ADLRAPTP+ A +M  P K  L+  L  L  R  + ++  +K+  N ++ L    
Sbjct: 235 ISDFVADLRAPTPSAAIDMIFPNKLSLEQGLDELTMRFKSQMLNHLKFYQNKIDHLQNLA 294

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
              + +      + +LD L  +L+  L + +       N+    +   
Sbjct: 295 KAKSLENAFFLRKQKLDFLQSQLKSVLNLKLLNYENKLNNFEELLAQH 342


>gi|294785363|ref|ZP_06750651.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_27]
 gi|294487077|gb|EFG34439.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_27]
          Length = 404

 Score =  253 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+  +I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKLQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+K  
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKKEL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L +    L N   T++  R  +     +L+  +E  +  K   F + I+++     I+ 
Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQIKNKRID 370



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   KKE +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKKELL 295

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                   +   + I  L   I +   +++  +   ++            L      NTL
Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397


>gi|257140030|ref|ZP_05588292.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           E264]
          Length = 393

 Score =  253 bits (645), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 113/442 (25%), Positives = 198/442 (44%), Gaps = 57/442 (12%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +  ++++G     EF P EG +  V   +T +    + Q+ +E++  +G G L  A  + 
Sbjct: 1   MRCVMFRGRAQHAEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRL 60

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L  EGLF+ + K  +P  P+ I V+TS   A +RD+L  ++ R P + VI++P  VQ
Sbjct: 61  KAQLEAEGLFAPERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQ 120

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G    +++A  +   +  +E       D++I+ RGGGSIEDLW FNDE + RAIA S +P
Sbjct: 121 GAGAAEKLAAMVATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVP 174

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++  +GHETD+T+AD+AAD+RAPTPTGAAE+  P +  L   L   +  L   + R +  
Sbjct: 175 VVCGVGHETDFTIADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDA 234

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +   L+ L + L +  + L      + +L   L       +      F  +  R +    
Sbjct: 235 RAQQLDWLARRLISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARP 294

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
             ++   RQ +    Q ++  +++                                    
Sbjct: 295 --DVAPARQVLATLAQRLDATLRRR----------------------------------- 317

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLAT 481
                       ++     V+     L+  + + TL+RGY   I       +     L  
Sbjct: 318 ------------VERDTARVAACAARLEVLSPQRTLERGYAALIDTQTGRAVRAPAALKP 365

Query: 482 KTRILINFFDGQANAIVINKAP 503
           + R+ ++  +G A+  + +  P
Sbjct: 366 QRRLTVHLAEGSADVSLADVQP 387


>gi|310778325|ref|YP_003966658.1| exodeoxyribonuclease VII, large subunit [Ilyobacter polytropus DSM
           2926]
 gi|309747648|gb|ADO82310.1| exodeoxyribonuclease VII, large subunit [Ilyobacter polytropus DSM
           2926]
          Length = 406

 Score =  253 bits (645), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 194/365 (53%), Gaps = 13/365 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           ++   Y+VS+ +  +K  +E N  L +  ++GEISG    + SGH YFSLKD + ++   
Sbjct: 1   MEDRIYTVSQFNKMVKDYLEDNNNLKNFFLKGEISGVN-YYKSGHLYFSLKDKNCQVRCT 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126
            +     KI    +EG    + G  T +     +QI++  L      G L   LEK KK+
Sbjct: 60  AFGYRYKKIPEDLKEGDSVKIFGDATLYEARGDFQIMVRHLEKENKMGALYEELEKVKKE 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L E+G F    K P+P +P+ I VITS TGA +RDI+     R+P + + ++P KVQG  
Sbjct: 120 LSEKGYFDRDKKRPMPSLPQTIGVITSGTGAAVRDIINTARLRYPNINIYVYPAKVQGLG 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             KE+   I  LN ++E       D+II  RGGGSIEDLW FN++ +  A  NS  PI+S
Sbjct: 180 AAKEVIRGIEALNKIEE------IDLIIAGRGGGSIEDLWTFNEKDVALAYFNSKKPIVS 233

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D  L D+ ADLR+ TPT A+EM VP K+ LQ S+ N E  L + + + I  K +
Sbjct: 234 AVGHEIDVLLTDFTADLRSSTPTHASEMVVPEKKKLQESIENREKYLKSYLRKYIHKKKD 293

Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            +++      + N  + +      +    RE   + E  I +K +     + ++K+    
Sbjct: 294 EISNRRNSFVIKNFQRLVQEKNMEVLDKEREFIKSYERYILKKRQEMEMKVEKLKALNPD 353

Query: 364 HNIQK 368
           + +++
Sbjct: 354 NILKR 358



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 6/162 (3%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-- 407
                  ++S    H  +       + Q+ IE   K    Y+     +K   +   R   
Sbjct: 243 LTDFTADLRSSTPTHASEMVVPEKKKLQESIENREKYLKSYLRKYIHKKKDEISNRRNSF 302

Query: 408 ---QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                +  +   +  +              I      + +    L++    N LKRGY+ 
Sbjct: 303 VIKNFQRLVQEKNMEVLDKEREFIKSYERYILKKRQEMEMKVEKLKALNPDNILKRGYSI 362

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
              +N   I    ++     +   F  G++ ++V      ++
Sbjct: 363 T-SSNGKVIKNAHDIEPGEILETIFHIGKSTSVVKEIDVDEK 403


>gi|219851193|ref|YP_002465625.1| exodeoxyribonuclease VII, large subunit [Methanosphaerula palustris
           E1-9c]
 gi|219545452|gb|ACL15902.1| exodeoxyribonuclease VII, large subunit [Methanosphaerula palustris
           E1-9c]
          Length = 419

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 130/388 (33%), Positives = 203/388 (52%), Gaps = 16/388 (4%)

Query: 15  YSVSELSYHLKHIV-ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH----SRIDAIIW 69
             VSE+S  ++ ++ +  L  + VRGEI+ Y   HSSGH YFSL +      S I  +IW
Sbjct: 22  LGVSEISGLIETLLGDQRLQEIWVRGEITNYTH-HSSGHRYFSLSEERFGKVSTIQCVIW 80

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +    +I      G+   + G I  +P   +YQ     +  +G G     +E+ K++L  
Sbjct: 81  RSDAARIGIDLANGMNVQIFGSIGLYPPQGRYQFYAREVRRTGEGEKHLLVERWKRELDA 140

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189
           EGLF+ + K P+P  PK++ V+TS TGAV++DI   IS RFPL +I+ P  VQG+    E
Sbjct: 141 EGLFAAERKRPLPRFPKVVGVVTSSTGAVLQDIRNVISRRFPLTLIVSPTVVQGETAHLE 200

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           IA AI +++T          D+II+ARGGGS EDL+ FN   +VRA+A    P++SA+GH
Sbjct: 201 IAAAIRRVDTR--------VDVIIVARGGGSFEDLFPFNHPDVVRAVAGCITPVVSAVGH 252

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D TL D AADLRAPTP+ AAE+ VP +  L S L+     L + +IR ++     + +
Sbjct: 253 EVDVTLCDLAADLRAPTPSAAAELVVPDRGELISELLTCRQHLIDHLIRRVQKGSTEVTT 312

Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L + L     ++ ++  R  L  L   L+  L + + R+          +++   +  + 
Sbjct: 313 LRERLHPARLERLMNRRREDLATLSEWLDRALTVGMERRRLEVREQRAMVEAGDPLRLLN 372

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +    +  + Q I    +       L +
Sbjct: 373 RGYCMVERENQPITSAHQISKGDQVLLR 400



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 3/131 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +L  +QH+   + + ++    E       LH    + +  +      +  L   ++  L
Sbjct: 287 ELLTCRQHLIDHLIRRVQKGSTEVTTLRERLHP--ARLERLMNRRREDLATLSEWLDRAL 344

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
           +  ++     V     ++++      L RGY  ++  N   IT    ++   ++L+   D
Sbjct: 345 TVGMERRRLEVREQRAMVEAGDPLRLLNRGYCMVEREN-QPITSAHQISKGDQVLLRLAD 403

Query: 492 GQANAIVINKA 502
           G   A +    
Sbjct: 404 GTGIAKIKEVT 414


>gi|294102023|ref|YP_003553881.1| exodeoxyribonuclease VII, large subunit [Aminobacterium colombiense
           DSM 12261]
 gi|293617003|gb|ADE57157.1| exodeoxyribonuclease VII, large subunit [Aminobacterium colombiense
           DSM 12261]
          Length = 418

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 107/359 (29%), Positives = 188/359 (52%), Gaps = 11/359 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
             + P+ SV E++  ++ +   +  L ++ V GEI   +  H+SGH YF+L  +  R+  
Sbjct: 3   GTNLPKLSVDEVTNRIQGLFFSDPVLQNLIVVGEIVEIK-KHTSGHVYFTLSGDEGRLSC 61

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +++K    ++   P +G E    G++  +P    YQ+ +  L P G G    A E+ + +
Sbjct: 62  VLFKNDAARVPEWPRKGDEVWAEGRVGVYPPRGSYQLYVRRLTPQGIGAAARAREELRLR 121

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L +EGLF  + K  +P  P+ +AVITS TGA I+D+L+    RFP   ++I P  VQG +
Sbjct: 122 LDKEGLFDPRLKRKLPAYPQKVAVITSSTGAAIKDVLKVSRNRFPQCSIVIVPCLVQGYD 181

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P+EI +A +Q+      R     D ++L RGGGS +DL  F+DE ++RAI +  +P+I+
Sbjct: 182 APEEIFSAFVQI------RPLIDVDAVMLVRGGGSRDDLNPFDDERVIRAIRSCPVPVIT 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHETD TL+D AAD+ A TP+ AAE   P    L   +    + L+  +   I+ K +
Sbjct: 236 GVGHETDTTLSDLAADVAASTPSAAAERLFPDHIDLIRHVDFFSSSLSRTMQTDIRKKKD 295

Query: 306 TLNSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L    +    +S + +      L    R ++  ++ ++  + +  + +   + +   +
Sbjct: 296 NLAHFQQLMFTHSSRMVERGAKILQENKRHMDLLMKTLLEGRKQALSSVAGALNALSPL 354



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 62/168 (36%), Gaps = 4/168 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + +   + +       ++     ++  +H++       R +  + ++K   L 
Sbjct: 239 HETDTTLSDLAADVAASTPSAAAERLFPDHIDLIRHVDFFSSSLSRTMQTDIRKKKDNLA 298

Query: 404 MLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
             ++     +   +      +++    ++ ++   ++    ++S     L + +  + L 
Sbjct: 299 HFQQLMFTHSSRMVERGAKILQENKRHMDLLMKTLLEGRKQALSSVAGALNALSPLSILG 358

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           RG+ S        +T    L  + +++++F DG++N  V       E+
Sbjct: 359 RGFISCTKEEGEVVTSVDQLEIREKLILSFIDGRSNVRVEKITKTGEK 406


>gi|116754609|ref|YP_843727.1| exodeoxyribonuclease VII, large subunit [Methanosaeta thermophila
           PT]
 gi|116666060|gb|ABK15087.1| Exodeoxyribonuclease VII large subunit [Methanosaeta thermophila
           PT]
          Length = 398

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 190/359 (52%), Gaps = 15/359 (4%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSVSEL   ++  +  +  L  V   GE+S     HSSGH YF+LKD+ ++I  +++K  
Sbjct: 5   YSVSELCTRIQERITGDVRLHDVWACGELSNVVN-HSSGHRYFTLKDSEAQISCVMFKRH 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEG 131
             +++F+   G+   V G +  + G    Q+ + S+ P  G G     LE  +++L  EG
Sbjct: 64  AEELDFVLRNGMNVRVFGDVGFYKGRGNVQLQVRSISPDTGIGRSAMELESLRRRLTAEG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191
           LFS + K P+P  P+ I ++TS  GA +RD+++ +  R+P R+I+ P  VQGD   + + 
Sbjct: 124 LFSPERKRPLPRYPERIGIVTSMDGAALRDVIRSLG-RYPARIILSPATVQGDAAAQSMI 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           +A+  L          R D+IIL RGGGS EDL  FND  + RAIA S  P+ISA+GHE 
Sbjct: 183 SALRAL--------RGRADVIILCRGGGSAEDLSPFNDVHLARAIAESDAPVISAVGHEV 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T+AD  AD RA TPT AA++AVP    ++  L N+E ++   I   ++   + L+ L 
Sbjct: 235 DVTVADLVADARASTPTAAAKLAVPDVREIEQLLRNMEDQMTWAIDSHLERIRSRLDYLS 294

Query: 312 KALPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + +        L   + RL  + R L      I+  + R       R+ S   +  + +
Sbjct: 295 RGIEARKMYAILEMRKLRLRDISRRLLDAERSIVDSRARRLEIARARLDSASPLAVLSR 353



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 5/137 (3%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM--LREQTKNRIFYLHTHIKKLITRIE 428
           + I +  +++E  +   +       + ++  L       +    +      ++ +  R+ 
Sbjct: 262 REIEQLLRNMEDQMTWAIDSHLERIRSRLDYLSRGIEARKMYAILEMRKLRLRDISRRLL 321

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                 + S    + I    L S +    L RGYT +  +    +    +LA    I + 
Sbjct: 322 DAERSIVDSRARRLEIARARLDSASPLAVLSRGYTMVVGSAG-VVCHAVDLAVGEEIRLV 380

Query: 489 FFDGQANAIV--INKAP 503
           F DG+A   V  I   P
Sbjct: 381 FSDGEACCNVNKIEIKP 397


>gi|221206583|ref|ZP_03579595.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2]
 gi|221173238|gb|EEE05673.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2]
          Length = 251

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/254 (33%), Positives = 143/254 (56%), Gaps = 10/254 (3%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PF+   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 5   SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF+P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 64  QQAQMRCVMFRGRAQYAEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + K P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P
Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG    + +  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAIA 
Sbjct: 184 APVQGAGAAERLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237

Query: 239 SSIPIISAIGHETD 252
           S +P++  +GHETD
Sbjct: 238 SELPVVCGVGHETD 251


>gi|57506041|ref|ZP_00371964.1| exodeoxyribonuclease VII, large subunit [Campylobacter upsaliensis
           RM3195]
 gi|57015649|gb|EAL52440.1| exodeoxyribonuclease VII, large subunit [Campylobacter upsaliensis
           RM3195]
          Length = 387

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 186/349 (53%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           +VSEL+   K ++ES+  ++ V GE+S     HSSGH YF LKD  S I  +++KG   K
Sbjct: 2   TVSELNLSAKALLESHFDNIFVSGELSKITM-HSSGHWYFELKDQCSSIACVMFKGNNFK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P+ G    + G ++ +  S +YQ I +S+   G G L       K+ L +EGLF +
Sbjct: 61  LGFEPKIGDFLELEGNLSLYAESGRYQFIAKSMKKEGFGDLEARFLALKESLQKEGLFDE 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
            HK  +P  P  I +I S T A + D+L+ I+ +  F  ++ +F    QG   P  +  A
Sbjct: 121 IHKKNLPKFPLKIGIIASFTSAALEDMLKIITQKAYFLAKIYVFNALTQGQNAPFSLIKA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE++ R I  +  PIISAIGHE D+
Sbjct: 181 LKKADAI-------GLDVLIMARGGGSREDLFCFNDEVLAREIFAAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ ADLRAPTP+ A  + +P KE L+  L  +E +L    + + K   N L++L K 
Sbjct: 234 VISDFVADLRAPTPSAAINILLPSKEDLEQKLDFIEDKLKTSFMIICKNLENKLSNLEKI 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +    +      L+ L ++L+  ++  I   +  F  + N     
Sbjct: 294 FKANSLPLMIEQKIKYLESLKKQLDLLIKNKIQISFLEFEKLKNAYLQH 342


>gi|72384795|gb|AAZ67689.1| probable exodeoxyribonuclease VII large subunit [Haemophilus
           parasuis 29755]
          Length = 352

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 187/356 (52%), Gaps = 10/356 (2%)

Query: 47  IHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
            HSSGH YF++KD  S I A+++KG  +K+ F P+EG E L+  +++ +     YQI + 
Sbjct: 3   KHSSGHLYFNVKDKESVISAMMFKGNASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVN 62

Query: 107 SLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166
            +   G G L   LE  KKKL +EG F   +K  IP  PK IAV+T+ TGA IRDI   I
Sbjct: 63  KMQLDGIGNLYQKLELLKKKLKKEGYFDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTI 122

Query: 167 SCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225
           + R+P +  I     VQG +  ++I   I   ++L         D II+ RGGGSIEDLW
Sbjct: 123 NNRYPLVEQIQISTLVQGTQARQDIIEKIQYADSL-------DVDTIIVGRGGGSIEDLW 175

Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           +FN+E +V+ I N   PIISA+GHETD+TL+D+ AD+RA TPT AA +A P +  L   +
Sbjct: 176 NFNEEDVVKTIFNCQTPIISAVGHETDFTLSDFVADVRAATPTQAAVIATPDQYELLQQI 235

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
              E  L+  I + I+++   LN +                  + D L R+L H L   +
Sbjct: 236 KQYEYTLSRYIKQYIEHQKKQLNHISSYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKV 295

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
            +   H   +        L   I + +Q I +    + +I+  ++  +    K K+
Sbjct: 296 EKSKHHLKLLQQSFNFKNLNQQITQEKQSIYQLHSRLSKIMSNNITNLKTVLKNKL 351


>gi|307243214|ref|ZP_07525385.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493342|gb|EFM65324.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus
           stomatis DSM 17678]
          Length = 401

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 123/317 (38%), Positives = 179/317 (56%), Gaps = 11/317 (3%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +      VSE++ ++K +   +  L+ V VRGEIS ++ IHSSGH Y +LKDN S+I  +
Sbjct: 1   MKIRVLEVSEVNEYIKKVFLDDPILNSVKVRGEISNFK-IHSSGHVYLTLKDNKSKIRCM 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           I++   NK +   + G + +  G I+ +     YQ+ ++++   G G L     K K+KL
Sbjct: 60  IYRSDYNK-DLELDNGSKIVADGYISNYVSDGSYQLYMKNVSLEGVGNLYLDFLKLKEKL 118

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EGLFS+ +K PIP  PK I V+TS TGAVIRDI+  IS R+P + + ++P  VQG + 
Sbjct: 119 DKEGLFSNYYKKPIPRFPKSIGVVTSETGAVIRDIINVISRRYPKVAIKLYPALVQGKDS 178

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              +   I   N           D II+ RGGGS+E+LW FNDE + RAI  SSIP+ISA
Sbjct: 179 VSSLIAGINFFNLEYP------VDTIIIGRGGGSLEELWSFNDEDLARAIFASSIPVISA 232

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GHETD+T+ D+ +D RAPTP+ AAE+A P    L      +  R+ N I   I  + + 
Sbjct: 233 VGHETDFTICDFVSDERAPTPSAAAEIATPNLADLLREQDLMAKRMTNSINNRIILEKHR 292

Query: 307 LNSLLKALPNSDQTLSC 323
           L S +            
Sbjct: 293 LRSSMDRFSQYADRYML 309



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 56/137 (40%), Gaps = 3/137 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR--IFYLHTHIKKLITRIEF 429
            +L +Q  + + +   +    + +K ++        Q  +R  +   +  +  ++ +I+ 
Sbjct: 266 DLLREQDLMAKRMTNSINNRIILEKHRLRSSMDRFSQYADRYMLGDRYIALDMILDKIDS 325

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
             +  I++    +++    + S    +   RGY+  +      ++  R++    ++ IN 
Sbjct: 326 SFTKYIQNKREEMNLYGVKMSSLNPFSIFDRGYSIAE-KEGRIVSTIRDIDQGDKLKINL 384

Query: 490 FDGQANAIVINKAPPKE 506
            DG+ +  V++     +
Sbjct: 385 KDGKLDCQVVDIEANDK 401


>gi|86148929|ref|ZP_01067161.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88597304|ref|ZP_01100539.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|218561984|ref|YP_002343763.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|14194732|sp|Q9PIH4|EX7L_CAMJE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|85840287|gb|EAQ57544.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88190365|gb|EAQ94339.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359690|emb|CAL34476.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925597|gb|ADC27949.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 387

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|253583760|ref|ZP_04860958.1| exodeoxyribonuclease VII large subunit [Fusobacterium varium ATCC
           27725]
 gi|251834332|gb|EES62895.1| exodeoxyribonuclease VII large subunit [Fusobacterium varium ATCC
           27725]
          Length = 406

 Score =  249 bits (636), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 114/360 (31%), Positives = 186/360 (51%), Gaps = 13/360 (3%)

Query: 15  YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSVSE +  +K+ +E  S+L    + GE+SG    + SGH YF+LKD  +++    +K  
Sbjct: 7   YSVSEFNRKVKNYLEENSDLREFFLEGEMSGVT-YYKSGHLYFNLKDKDAQVKCAAFKYK 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLEEG 131
             +I    ++G    + G +  +     +QI++  +      G L   LEK KK++ ++G
Sbjct: 66  FKRIPEDLKDGDSVKIFGDVGFYENRGDFQILVRHIEKKNELGELFAKLEKLKKEMADQG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
            F   HK P+P  PK I V+T+ TGA I+DI++ I  R   + + ++P KVQG    +EI
Sbjct: 126 YFDHSHKKPLPKFPKNIGVVTAYTGAAIQDIIKTIKKRDVTINIYVYPAKVQGIGAKEEI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  LN +++       D+II  RGGGSIEDLW FN++ +  A  NS  PIISA+GHE
Sbjct: 186 VKGIKTLNKIED------IDLIIAGRGGGSIEDLWSFNEKEVALAFYNSEKPIISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D  AD RA TPT A E++VP ++    S+ +    L +++   I+     L   
Sbjct: 240 IDYLLSDLTADARAATPTQAIELSVPERKKTLESIEDRSRYLKSLMKNYIEILKRELEKR 299

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                + N  + +      +      L+   E  I     + N+ +N+I +   +  +++
Sbjct: 300 ENNYYIKNFSRNIEEKNQEIIEKEHLLKKAFEHHIQNLQNNLNNRVNKIINLNPLETLKR 359



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 60/141 (42%), Gaps = 3/141 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +K  + I ++ ++++ ++K ++  +  E +++    ++  +     I   +  I +    
Sbjct: 268 KKTLESIEDRSRYLKSLMKNYIEILKRELEKRENNYYI--KNFSRNIEEKNQEIIEKEHL 325

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++    H I++   +++     + +     TLKRGY+ I   N   I +  +L+    I 
Sbjct: 326 LKKAFEHHIQNLQNNLNNRVNKIINLNPLETLKRGYSVI-SKNGTSIKKVSDLSINDEID 384

Query: 487 INFFDGQANAIVINKAPPKEQ 507
           I   DG    IV      K+ 
Sbjct: 385 IKMTDGLIKGIVKEIKNEKDT 405


>gi|57168464|ref|ZP_00367598.1| exodeoxyribonuclease VII, large subunit [Campylobacter coli RM2228]
 gi|305432883|ref|ZP_07402041.1| exodeoxyribonuclease VII large subunit [Campylobacter coli JV20]
 gi|57020272|gb|EAL56946.1| exodeoxyribonuclease VII, large subunit [Campylobacter coli RM2228]
 gi|304444037|gb|EFM36692.1| exodeoxyribonuclease VII large subunit [Campylobacter coli JV20]
          Length = 387

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 186/348 (53%), Gaps = 12/348 (3%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           VSEL+   K ++E++L+ + + GE+S     H SGH YF LKD  S I   ++KG   K+
Sbjct: 3   VSELNLKAKALLETHLNDIVLSGELSKITM-HGSGHWYFDLKDEKSSIACAMFKGANLKV 61

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
           +F P+ G    ++G ++ +  S +YQ I  S+  +G G L       K++L +EGLF+ +
Sbjct: 62  DFQPKVGDFLELVGSVSLYAESGRYQFIASSMKKAGMGDLEAQFLALKERLQKEGLFNSE 121

Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANAI 194
           +K  +P  PK I +ITS T A ++D+L+ I+ +  F  ++ +F    QG      +  A+
Sbjct: 122 YKKTLPQFPKKIGIITSKTSAALQDMLKLINQKEYFLAKIYVFNALTQGSGAAYSLIQAL 181

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            + + +         D+II+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+ 
Sbjct: 182 KKADEI-------GLDVIIIARGGGSREDLFCFNDEGLAREIFKAKTPIISAIGHEIDYV 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++D+ AD RAPTP+ A +  +  +  L+  L  LE +L  +    ++Y  N L++L K  
Sbjct: 235 ISDFVADFRAPTPSAAIDTLLYSRLDLEQGLDLLEEKLTKLWESKLEYCENLLSNLHKFF 294

Query: 315 --PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
              + +  +     +L  L ++ +  +E  I +       + N     
Sbjct: 295 KAKSLETMIEAKEKQLAFLLKQAKIIIESKIQKAELELQKLQNAFFQH 342


>gi|254303092|ref|ZP_04970450.1| exodeoxyribonuclease VII [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323284|gb|EDK88534.1| exodeoxyribonuclease VII [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 404

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD  S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDGKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              L +I    +EG    + G +  +    ++Q+++  +      G+L   LEK K+KL 
Sbjct: 61  NYKLKRIPEDLKEGDLIKLFGDVGFYEVKGEFQVLVRYIEKQNALGSLYAKLEKVKEKLA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
             G F ++HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 GLGYFDEEHKKDLPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN +++       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIED------IDFIIAGRGGGSIEDLWAFNEEEVAIAFFNSKKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L   L   E  +  ++   +       
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            L        N   T++  R  +      L+  +E  I +K   F + I++I     I+ 
Sbjct: 295 LLRIENYHFKNFPNTINNLREIIVEKEICLKDAIERFIEQKRNIFENKIDKITVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYTVSQVKNKRID 370



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                  + +    ++      I+    +    + + +     I K    Y+   K+E +
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRELL 295

Query: 400 AILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +     +   N I  L   I +    ++  +   I+            +      NTL
Sbjct: 296 LRIENYHFKNFPNTINNLREIIVEKEICLKDAIERFIEQKRNIFENKIDKITVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGYT  Q  N   I    ++     ++    DG+  +IV  K
Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMITILKDGKVISIVKEK 397


>gi|148985102|ref|ZP_01818341.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922547|gb|EDK73665.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP3-BS71]
          Length = 278

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 123/285 (43%), Positives = 173/285 (60%), Gaps = 11/285 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+H+ I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SRIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  +P   K I V+TS +GAVIRDI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           EIA  I + N           D++I+ RGGGSIEDLW FN+E++VRAI  S +P+IS++G
Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
           HETD TLAD+ AD RA TPT AAE+A PV +    + +  +    
Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQENGW 278


>gi|295111307|emb|CBL28057.1| exodeoxyribonuclease VII, large subunit [Synergistetes bacterium
           SGP1]
          Length = 415

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 11/371 (2%)

Query: 14  EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           E +V EL+ +++ +  S+L    + + GEI+ ++  H+SGH YF+L    +RI   +++ 
Sbjct: 10  ELTVDELNAYIQGLFNSDLLLKALVISGEIAEFK-RHTSGHCYFTLLGTDTRISCAMFRR 68

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
             + +   P  G + L+ G +  +P    YQ+    LIP G+G +  A ++ K++L  EG
Sbjct: 69  DADLLPEWPRNGDQVLIEGSVGVYPQRGVYQLYARRLIPVGAGAIERARQELKRRLELEG 128

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEI 190
           LF   HK PI   P  +AVITS TGA +RD+L+    R+PL  +++ P  VQG + P++I
Sbjct: 129 LFHPSHKRPISPYPSRVAVITSATGAALRDVLRISGRRYPLSDIVVVPTLVQGPDAPEDI 188

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A  +             D ++L RGGGS EDL  F+DE +VRA+ N   P++S IGHE
Sbjct: 189 VRAFAR------AGAMSGVDCVLLVRGGGSREDLVPFDDERVVRAVRNCPFPVVSGIGHE 242

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D TL+D AADL A TP+ AAE+  P +  L + L  +  R+     R I  +       
Sbjct: 243 VDSTLSDLAADLTASTPSAAAEVVFPDRAALLAWLAQVRQRVGGSARRRIGVERARCRLA 302

Query: 311 LKALPNSDQT-LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L+ +  + +      R RL    R L  ++ + +       +     +     +  + + 
Sbjct: 303 LEGMERALKLRTGTERSRLHEGLRALSRSMTLRLRDARSELSTRAASLSGLSPLAALARG 362

Query: 370 RQHILEKQQHI 380
                 + + +
Sbjct: 363 YVIAEREGRRL 373



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 5/163 (3%)

Query: 350 FNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHML 405
            + +   + +         +  +R  +L     + Q V    R     ++ +  + L  +
Sbjct: 247 LSDLAADLTASTPSAAAEVVFPDRAALLAWLAQVRQRVGGSARRRIGVERARCRLALEGM 306

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
               K R     + + + +  +   ++ +++   + +S     L   +    L RGY   
Sbjct: 307 ERALKLRTGTERSRLHEGLRALSRSMTLRLRDARSELSTRAASLSGLSPLAALARGYVIA 366

Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           +      +   R   +   + + F DG+A+ +V   AP     
Sbjct: 367 ERE-GRRLFSVREALSGAALSLCFRDGRADCLVRAIAPFDPPN 408


>gi|227432106|ref|ZP_03914118.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227352133|gb|EEJ42347.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 425

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 18/350 (5%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAI 67
           +   +VS L+ +LK   +++  L+ V V GEIS   G     H YFS+KD+  ++ I+A 
Sbjct: 6   NQYLTVSALTAYLKRKFDADPYLAKVYVTGEISNM-GRRRGPHLYFSIKDSESNAVINAS 64

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G   +I+F PEEG++   IG++  +     Y II+ES+ P G G L  A E+ K+KL
Sbjct: 65  MF-GYERRIKFKPEEGMKINAIGRVEIYEPRGSYSIILESMTPDGVGELFLAYEQLKRKL 123

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF    K  +P  PK IAV+TSPTGAVI DI + +  RFP ++VI+FP  VQG++ 
Sbjct: 124 QAEGLFDLPKKQ-VPLFPKKIAVVTSPTGAVIEDIARTVQRRFPSVQVILFPAVVQGEKA 182

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   + +++           D +I+ RGGGSIEDLW FNDE + R +A+   P+IS+
Sbjct: 183 APTIIRQLQRID-------HMDFDTLIVGRGGGSIEDLWAFNDEKLARTVASMKTPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ-SSLINLEARLNNIIIRLIKYKIN 305
           +GHETD TL D+ +D RA TPT AAE+A PV      + L  L  R  + I ++I  +  
Sbjct: 236 VGHETDNTLVDFVSDRRAATPTAAAELATPVTLQQLTTRLQELHLRQISRIKQMIDMRQQ 295

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            LN +         D+  +    R+D+L   L+   +  +  +      I
Sbjct: 296 RLNRVATHVIFQQPDRLYTGYNQRIDQLSHALQQLTKQKVINEEHKLAAI 345



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 7/158 (4%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHM 404
              +  R++   L   I + +Q I  +QQ + +     I +Q  R      +    + H 
Sbjct: 268 LQQLTTRLQELHL-RQISRIKQMIDMRQQRLNRVATHVIFQQPDRLYTGYNQRIDQLSHA 326

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
           L++ TK ++      +  ++ R + +    ++     + + +  L   +    L  GY  
Sbjct: 327 LQQLTKQKVINEEHKLAAILQRQQQLQRSLLQPVQERLQLLSTKLDLVSPLKILSSGYAI 386

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           ++  +N  +    N+     I + F DG A A +    
Sbjct: 387 VEH-DNKVVRSITNITINDEIDMRFSDGHATAKITGVQ 423


>gi|157414622|ref|YP_001481878.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|172047041|sp|A8FKB4|EX7L_CAMJ8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157385586|gb|ABV51901.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747262|gb|ADN90532.1| Exodeoxyribonuclease 7 large subunit [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931597|gb|EFV10563.1| Exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 387

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 178/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
             K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 LFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|237736952|ref|ZP_04567433.1| exodeoxyribonuclease VII large subunit [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420814|gb|EEO35861.1| exodeoxyribonuclease VII large subunit [Fusobacterium mortiferum
           ATCC 9817]
          Length = 400

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 13/360 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           Y+VSE +  +K  +E N  L    + GE+SG    + SGH YF+LKD  ++I  + +K  
Sbjct: 7   YTVSEFNRMVKGYIEENPSLREFFLEGELSGVT-YYKSGHLYFNLKDKDAQIKCVAFKYK 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEG 131
             +I    ++G    + G +  +     +QI++  +      G +   LE+ KK +  +G
Sbjct: 66  FKRIAEDLKDGDSVKLFGDVGFYENRGDFQILVRHIEKKNMLGDMFAKLEELKKTMERKG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190
            FS  +K P+P  P+ I V+T+ TGA ++DI++ +  R   + + I+P KVQG     EI
Sbjct: 126 YFSSIYKKPLPRYPRTIGVVTAITGAAVQDIIKTVKKRDNTIDIYIYPAKVQGVGASDEI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  LN +      P  D+II  RGGGSIEDLW FN+E    A  NS  PIISA+GHE
Sbjct: 186 VRGIEVLNKI------PEIDMIIAGRGGGSIEDLWSFNEEKTAMAFFNSKKPIISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLN 308
            D  L D  AD+RA TPT A E++VP +     SL + E  L  ++  ++  K       
Sbjct: 240 IDNLLTDLVADVRAATPTQAVELSVPERRKSIESLEDRERYLKTLMKNILVSKRKELESR 299

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L N  + +      L      L+  +E  +  K     + ++R+ +   +  +++
Sbjct: 300 KENYYLKNFSKVIEEKNNLLIERENRLQRVIEYYMESKKNQLENRVHRLITLNPLKTLER 359



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 54/163 (33%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                    ++  +++      ++    + R+ I   +     +       +  ++KE  
Sbjct: 238 HEIDNLLTDLVADVRAATPTQAVELSVPERRKSIESLEDRERYLKTLMKNILVSKRKELE 297

Query: 400 AIL-HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +   +   +     I   +  + +   R++ ++ + ++S    +      L +     TL
Sbjct: 298 SRKENYYLKNFSKVIEEKNNLLIERENRLQRVIEYYMESKKNQLENRVHRLITLNPLKTL 357

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +RGY+ +   N   +     L     I I   DG   + V   
Sbjct: 358 ERGYSVVT-KNGVGVKSVSQLTAGDEINIKVNDGNIISEVKKI 399


>gi|116618698|ref|YP_819069.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116097545|gb|ABJ62696.1| Exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 425

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 18/350 (5%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAI 67
           +   +VS L+ +LK   +++  L+ V V GEIS   G     H YFS+KD+  ++ I+A 
Sbjct: 6   NQYLTVSALTAYLKRKFDADPYLAKVYVTGEISNM-GRRRGPHLYFSIKDSESNAVINAS 64

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++ G   +I+F PEEG++   IG++  +     Y II+ES+ P G G L  A E+ K+KL
Sbjct: 65  MF-GYERRIKFQPEEGMKINAIGRVEIYEPRGSYSIILESMTPDGVGELFLAYEQLKRKL 123

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
             EGLF    K  +P  PK IAV+TSPTGAVI DI + +  RFP  +VI+FP  VQG++ 
Sbjct: 124 QAEGLFDLPKKQ-VPLFPKKIAVVTSPTGAVIEDIARTVQRRFPSAQVILFPAVVQGEKA 182

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   + +++ +         D +I+ RGGGSIEDLW FNDE + R +A+   P+IS+
Sbjct: 183 APTIIRQLQRIDNM-------DFDTLIVGRGGGSIEDLWAFNDEKLARTVASMKTPVISS 235

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ-SSLINLEARLNNIIIRLIKYKIN 305
           +GHETD TL D+ +D RA TPT AAE+A PV      + L  L  R  + I ++I  +  
Sbjct: 236 VGHETDNTLVDFVSDRRAATPTAAAELATPVTLQQLTTRLQELHLRQISRIKQMIDMRQQ 295

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            LN +         D+  +    R+D+L   L+   +  +  +      I
Sbjct: 296 RLNRVATHVIFQQPDRLYTGYNQRIDQLSHALQQLTKQKVINEEHKLAAI 345



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 61/158 (38%), Gaps = 7/158 (4%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHM 404
              +  R++   L   I + +Q I  +QQ + +     I +Q  R      +    + H 
Sbjct: 268 LQQLTTRLQELHL-RQISRIKQMIDMRQQRLNRVATHVIFQQPDRLYTGYNQRIDQLSHA 326

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
           L++ TK ++      +  ++ R + +    ++     + + +  L   +    L  GY  
Sbjct: 327 LQQLTKQKVINEEHKLAAILQRQQQLQRSLLQPVQERLQLLSTKLDLVSPLKILSSGYAI 386

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           ++  +N  +    N+     I ++F DG A A +    
Sbjct: 387 VEH-DNKVVRSITNITINDEIDMHFSDGHATAKITGVQ 423


>gi|283955197|ref|ZP_06372699.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793410|gb|EFC32177.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 387

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+  +K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKVKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K+ L +EGLF  
Sbjct: 61  VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKECLQKEGLFDA 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
             K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ +F    QG+     +  A
Sbjct: 121 HFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYLFDALTQGNNAAFSLVQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------NLDVLIIARGGGSKEDLFCFNDENLAREIFKARTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  L+ SL   E +L  +    ++   N L +L + 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDLEQSLDLAEEKLTQLWNNKMQNYENLLLNLNRF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHHIEKQLNHLLVNQMRYNELKLDKLQNVYSQH 342


>gi|121613063|ref|YP_001000035.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148926420|ref|ZP_01810103.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|167004993|ref|ZP_02270751.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205356025|ref|ZP_03222793.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|158513878|sp|A1VY44|EX7L_CAMJJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|87250083|gb|EAQ73041.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|145844583|gb|EDK21689.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|205346149|gb|EDZ32784.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 387

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|57237376|ref|YP_178389.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni
           RM1221]
 gi|81819567|sp|Q5HWE6|EX7L_CAMJR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|57166180|gb|AAW34959.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           RM1221]
 gi|315057746|gb|ADT72075.1| Exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 387

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIRA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|86151353|ref|ZP_01069568.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|86153887|ref|ZP_01072090.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|85841700|gb|EAQ58947.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|85842848|gb|EAQ60060.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni HB93-13]
          Length = 387

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPVVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         DI+I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDILIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|283955750|ref|ZP_06373241.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792705|gb|EFC31483.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 387

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++  ++ + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFDNIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDS 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+     +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNASFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         D++I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDALFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293

Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
               +  + +     +   + ++L H L   +       + + N     
Sbjct: 294 FKFNSLPKIIDEKIKQSYNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342


>gi|257469333|ref|ZP_05633427.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|317063580|ref|ZP_07928065.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|313689256|gb|EFS26091.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC
           49185]
          Length = 406

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/360 (31%), Positives = 184/360 (51%), Gaps = 13/360 (3%)

Query: 15  YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSVSE +  +K+ +E  S+L    + GE+SG    + SGH YF+LKD  +++    +K  
Sbjct: 7   YSVSEFNKKVKNYLEENSDLREFFLEGEMSGVT-YYKSGHLYFNLKDKEAQVKCAAFKYK 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLEEG 131
             +I    ++G    + G +  +     +QI++  +      G L   LEK KK++ ++G
Sbjct: 66  FKRIAEDLKDGDSVKIFGDVGFYENRGDFQILVRHIEKKNELGELFAKLEKLKKEMADQG 125

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190
            F   HK  +P  PK I V+T+ TGA I+DI++ I  R   + + ++P KVQG    +EI
Sbjct: 126 YFDPAHKKLLPKYPKNIGVVTAYTGAAIQDIIKTIKKRDDTINIYVYPAKVQGIGAKEEI 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
              I  LN +         D+II  RGGGSIEDLW FN++ +  A  NS  PIISA+GHE
Sbjct: 186 VKGIKTLNKI------EGIDLIIAGRGGGSIEDLWSFNEKEVALAFYNSEKPIISAVGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D+ L+D  AD RA TPT A E++VP ++    S+ +    L +++   ++     L   
Sbjct: 240 IDYLLSDLTADARAATPTQAVELSVPERKKTLESIEDRNRYLKSLMKSYMEILKRELEKR 299

Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                + N  + +      +      L+ + E  I     + N+ IN+I +   +  +++
Sbjct: 300 ENNYYIKNFKRNIEEKNQEVIEKEILLKKSFERHIQNLQNNLNNRINKIVNLNPLETLKR 359



 Score = 67.9 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 58/141 (41%), Gaps = 3/141 (2%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +K  + I ++ ++++ ++K ++  +  E +++    ++  +  K  I   +  + +    
Sbjct: 268 KKTLESIEDRNRYLKSLMKSYMEILKRELEKRENNYYI--KNFKRNIEEKNQEVIEKEIL 325

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++      I++   +++     + +     TLKRGY+ +       I +  +L     I 
Sbjct: 326 LKKSFERHIQNLQNNLNNRINKIVNLNPLETLKRGYSVVT-KKGTSIKKVSDLLIDDEID 384

Query: 487 INFFDGQANAIVINKAPPKEQ 507
           I   DG    IV      K+ 
Sbjct: 385 IKMTDGLIKGIVKEIKNEKDT 405


>gi|282856377|ref|ZP_06265656.1| exodeoxyribonuclease VII, large subunit [Pyramidobacter piscolens
           W5455]
 gi|282585748|gb|EFB91037.1| exodeoxyribonuclease VII, large subunit [Pyramidobacter piscolens
           W5455]
          Length = 419

 Score =  246 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 184/421 (43%), Gaps = 11/421 (2%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
             +        +V E++  +K++++    L+H+ V GE++ ++  H SGH YF LK  ++
Sbjct: 6   PARVKNAAAPLTVDEVALRVKNLLDYDETLAHLVVEGELTDFK-RHVSGHVYFVLKGQNA 64

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +  ++++G    +   P  G   +V G +  +      QI  + + P G G    A E+
Sbjct: 65  SLPCVMFRGDAAGMLLWPAVGDRVVVSGNVRLYEARGAVQIYAQKMYPLGLGAAARAKEE 124

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            + +L +EGLF+   K P+P  P+ +A +TS TGA +RD++++   RFP   +I+ P  V
Sbjct: 125 LRLRLEKEGLFAPARKRPLPRYPRRVACVTSDTGAAVRDVIRQFRTRFPAAELIVVPCLV 184

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG      +  A      L+     P  D  +L RGGG+ EDL  F+DE +VR +A  ++
Sbjct: 185 QG------VRAAESAALALRRASALPGVDAALLVRGGGAKEDLNPFDDEELVREVARCAV 238

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR-LI 300
           P++  +GHE DW+L D AAD R PTPT AA    P +      L      L+    R L 
Sbjct: 239 PVVCGVGHEVDWSLCDLAADRREPTPTAAAASVFPDRAEELDGLAECARLLHMHAARALR 298

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             K    N          ++L  +  RLD L  +  +     +       +     +++ 
Sbjct: 299 DEKRELANREENMRRFWGRSLENAAQRLDDLDEKTTYRACAELRLMNGRLDEFERSLENL 358

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                 ++    ++   + +    +         +     +   +       +     HI
Sbjct: 359 SPAALARRGYSLVMSGGRPLLSSAQARCGDALSVQMLDGTVAGHVESVEPRGLNVRDAHI 418

Query: 421 K 421
           +
Sbjct: 419 Q 419



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 42/135 (31%), Gaps = 1/135 (0%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             + +    +    +     R +  EK+E       +R      +      +  L  +  
Sbjct: 275 RAEELDGLAECARLLHMHAARALRDEKRELANREENMRRFWGRSLENAAQRLDDLDEKTT 334

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
           +    +++  +  +    R L++ +     +RGY+ +  +    +           + + 
Sbjct: 335 YRACAELRLMNGRLDEFERSLENLSPAALARRGYSLVM-SGGRPLLSSAQARCGDALSVQ 393

Query: 489 FFDGQANAIVINKAP 503
             DG     V +  P
Sbjct: 394 MLDGTVAGHVESVEP 408


>gi|261350690|ref|ZP_05976107.1| exodeoxyribonuclease VII, large subunit [Methanobrevibacter smithii
           DSM 2374]
 gi|288861473|gb|EFC93771.1| exodeoxyribonuclease VII, large subunit [Methanobrevibacter smithii
           DSM 2374]
          Length = 404

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 13/397 (3%)

Query: 11  DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           ++  YS+S ++  +   +    +   + +RGEI+ + G ++SGH YFSLKD +S I  ++
Sbjct: 3   ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +K +   ++F P+ G++ +  G+++ +      Q  +  +  +G G L  A EK KKKL 
Sbjct: 63  FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188
           +EGLF D+    IP  PK I VITS +G  I+DI+  I  R+P  +I++   VQG    +
Sbjct: 123 KEGLFKDKKA--IPQYPKKIGVITSASGKAIKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I   I   N           D+II+ RGGGS +DLW FN E IVR+IANS  P+I+AIG
Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306
           H TD TL+D A+D  A TPT AAE+ VP K  L   L N+E RLN++I   +        
Sbjct: 234 HSTDKTLSDMASDKVAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           ++   K L +        +  L  L    E +L  +I       ++  N    +   + +
Sbjct: 294 ISKNNKTLKDHLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            K    I   +  ++  +   L     +       L 
Sbjct: 354 NKKVGKITLFKNELDNNISNCLLEYENKLNLHFKNLK 390


>gi|315123893|ref|YP_004065897.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315017615|gb|ADT65708.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 303

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 10/302 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           + +EL+   K ++E++   + + GEIS    +H SGH YF LKD  S I   ++KG   K
Sbjct: 2   TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           + F P  G    + G ++ +P S +YQ I  S+  +G G L       K++L +EGLF  
Sbjct: 61  VGFKPVVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193
           + K  +P  PK + +ITS T A ++D+L+ I  +  F  ++ IF    QG+  P  +  A
Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           + + + +         DI+I+ARGGGS EDL+ FNDE + R I  +  PIISAIGHE D+
Sbjct: 181 LKKADDM-------DLDILIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
            ++D+ AD RAPTP+ A +     K  ++ SL  +E +L  +    I+   N L +L K 
Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293

Query: 314 LP 315
             
Sbjct: 294 FK 295


>gi|46201317|ref|ZP_00208057.1| COG1570: Exonuclease VII, large subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 221

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 2/218 (0%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN      S + PEYSVSELS  L+  VE   S V VRGEISG++  HSSGH YF+LKD 
Sbjct: 1   MNEERPAPS-NVPEYSVSELSGSLRKTVEDAFSFVRVRGEISGFK-RHSSGHLYFALKDA 58

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +DA+ W+G+  K+   PE+G+E +  G++TT+PG SKYQ+++E +  +G G LL  L
Sbjct: 59  DAVLDAVCWRGSAGKLSIGPEDGMEVVATGRLTTYPGRSKYQMVVERMELAGQGALLKML 118

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E RKK+L+ EGLF    K PIPF+P++I V+TSPTGAVIRDIL R++ RFP RV+++PV 
Sbjct: 119 EDRKKRLMAEGLFDTAKKRPIPFLPEVIGVVTSPTGAVIRDILHRLAERFPRRVLLWPVA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218
           VQGD    ++A AI   N L+ G   PRPD++I+AR  
Sbjct: 179 VQGDGAAAQVAAAIRGFNALEPGGAVPRPDVLIVARAA 216


>gi|167947992|ref|ZP_02535066.1| Exodeoxyribonuclease VII [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 298

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 89/244 (36%), Positives = 146/244 (59%), Gaps = 8/244 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + +   +   YS+S L    + ++E +   + V GEIS      +SGH YF+LKD  ++
Sbjct: 1   MNSQLKPNRDIYSISRLVRESRAVIEGSFPLLWVEGEISNL-ARPASGHIYFTLKDQVAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   +++    ++ F P+ G + LV  +++ +    ++Q+ IE + P+G G L  A ++ 
Sbjct: 60  VRCAMFRIKRQRLRFQPQNGQQVLVRARVSLYEARGEFQLNIEHMEPAGEGALRQAFDRL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K KL  EGLF  +HK P+P +P+ I +ITSP+GA +RD+L  ++ RFP + ++I PV+VQ
Sbjct: 120 KAKLAAEGLFDSEHKQPLPRLPRQIGLITSPSGAALRDLLTVLARRFPAIPLLIHPVQVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           GD   ++I   +   N  +      R D++ILARGGGS+EDL  FNDE + RAI +S IP
Sbjct: 180 GDTAAQQIVQMLQLANRQQ------RCDLLILARGGGSLEDLQPFNDERVARAIFDSQIP 233

Query: 243 IISA 246
           +I+ 
Sbjct: 234 LITG 237


>gi|269792647|ref|YP_003317551.1| exodeoxyribonuclease VII, large subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100282|gb|ACZ19269.1| exodeoxyribonuclease VII, large subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 397

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 10/366 (2%)

Query: 17  VSELSYHLKHIV-ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           V  L+  ++  +      ++ VRG++ G +  H+SGH YF+L    +RI   +++ +   
Sbjct: 9   VDSLTDRIRSALTSPPFRNIWVRGQLEGLK-RHTSGHVYFTLLGASARISCAMFRSSAAS 67

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           +   P +G E +V G +  +P    YQ+I   L   G G      E  ++KL EEGLF  
Sbjct: 68  VLHWPGDGQEVVVNGSLDLYPPRGTYQVIASKLYHLGVGDRARQKELVRRKLEEEGLFDP 127

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+P IP  + V+TSP+GA ++D+++    RFP   +++ P +VQG   P  IA A+
Sbjct: 128 RLKRPVPPIPSRVLVVTSPSGAALQDVIRVSGERFPQCEILVIPAQVQGFGAPGSIAEAM 187

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            + + +      P    ++L RGGGS +DL  F+ E + RAI     P++  +GH+ D T
Sbjct: 188 RRASKI------PAGSCVMLVRGGGSRDDLDPFDQEEVARAIRACPYPVVVGVGHQVDTT 241

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD AADL APTP+GAAE   P +  L   +  +    ++ + R I      L+SL   L
Sbjct: 242 IADLAADLSAPTPSGAAERVFPDRRELARRVGGMLKLGSSHLKRRITASGARLDSLGSRL 301

Query: 315 PNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
               +   S   +RL  L       L + + R Y     +   +++   +  +++    I
Sbjct: 302 KRPLEGAFSREDFRLRSLRSSAASALRLSLERGYGQLRDLSGALEALSPLGVLKRGYAEI 361

Query: 374 LEKQQH 379
            +    
Sbjct: 362 QDMNGR 367



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 4/161 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKI 399
            +       +   + +       ++      E  +     ++       R I        
Sbjct: 236 HQVDTTIADLAADLSAPTPSGAAERVFPDRRELARRVGGMLKLGSSHLKRRITASGARLD 295

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
           ++   L+   +         ++ L +     L   ++  +  +   +  L++ +    LK
Sbjct: 296 SLGSRLKRPLEGAFSREDFRLRSLRSSAASALRLSLERGYGQLRDLSGALEALSPLGVLK 355

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           RGY  IQD N   I    +L    R+ I F DG   A ++ 
Sbjct: 356 RGYAEIQDMNGRKIPCAADLVPGQRVTILFQDGSRPARILG 396


>gi|38233538|ref|NP_939305.1| exodeoxyribonuclease VII large subunit [Corynebacterium diphtheriae
           NCTC 13129]
 gi|81829937|sp|Q6NI37|EX7L_CORDI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|38199798|emb|CAE49461.1| Exodeoxyribonuclease VII large subunit [Corynebacterium
           diphtheriae]
          Length = 413

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + + +     + V EL+  +K  +E  L H+ V G+I+      S   +Y +L+D  + 
Sbjct: 1   MAAQPNAPESAWPVRELNSKVKSWIER-LGHLWVEGQITQLNMKPSWKFSYITLRDPEAE 59

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
                      L+ +    ++G   +V GK   + G   + + +  + P G G LL  +E
Sbjct: 60  ASVQLTCATSLLHSLPSRLQDGDRVVVYGKPAFYEGRGSFSLWVTDIRPVGVGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + +++L  EGLF    K P+PF+P  I +IT    A  RD+L     R+P ++  +    
Sbjct: 120 RLRQQLASEGLFDPALKKPLPFLPHTIGLITGRGSAAERDVLAVAHSRWPEVKFNVINTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A+ +L+        P  D+II+ARGGGS+EDL  F++E + RA+  + 
Sbjct: 180 VQGARAVPEIIEALQRLDA------DPSVDVIIIARGGGSVEDLLPFSEEALQRAVVAAH 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L +R    +   +
Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKKVVPDVAAERQLIAELRSRSAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L ++     L +  + ++  R  + R    +  ++  ++  +      +  ++ 
Sbjct: 294 HKERQQLAAVRSRPALADPVRAITLHREEIARSISSIRRDMRYMLSTERATVASLRQQVA 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPSATLAR 363



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410
             +++       +K    +  ++Q I ++  +    +     ++   L  +R +      
Sbjct: 253 ADLRAATPTDAAKKVVPDVAAERQLIAELRSRSAAALRGWVHKERQQLAAVRSRPALADP 312

Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      I + I+ I   + + + +   +V+   + + +     TL RGY  +Q   
Sbjct: 313 VRAITLHREEIARSISSIRRDMRYMLSTERATVASLRQQVAALGPSATLARGYAVVQVVP 372

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +T        +++ I   DG   A  +   P  
Sbjct: 373 RDGSAPEVVTTIGMSPPGSQLRIRVADGSITAAAMQTTPAD 413


>gi|297192336|ref|ZP_06909734.1| exodeoxyribonuclease 7 large subunit [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151301|gb|EFH31073.1| exodeoxyribonuclease 7 large subunit [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 402

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 167/366 (45%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ K+
Sbjct: 63  VTCFRQVFDAVADVVTEGARVVVHAKPEWYAPRGQLSLRAVEIRPVGIGELLARLEQLKR 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K  +PF+P  + ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLGAEGLFAADRKKSLPFLPHRVGLVCGRASAAERDVLENARRRWPHVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L E       D+II+ARGGGS+EDL  F+DE +VRA+A  S P++
Sbjct: 183 NAVAQVVQAVKELDALDE------VDVIIVARGGGSVEDLLPFSDEQLVRAVAACSTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELVRVRQLRDRALRTVQGLLDREE 296

Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           + L   L    + +  + +      +D L       L  ++ R      H   R+ S   
Sbjct: 297 HGLAHALARPCMEHPRRMVDERAAEVDALVARSRRVLGHLLDRADSELAHTRARVVSLSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATLER 362



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + + +    + V+  L          +A      E  +  +      +  L+ R   +L
Sbjct: 276 RVRQLRDRALRTVQGLLDREEHGLAHALAR--PCMEHPRRMVDERAAEVDALVARSRRVL 333

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
            H +    + ++ T   + S +   TL+RGY  +Q  +   +     +     +     +
Sbjct: 334 GHLLDRADSELAHTRARVVSLSPAATLERGYAVLQRADGAVVRSPDEVTAGDPLRARVAE 393

Query: 492 GQANAIVIN 500
           G+    V  
Sbjct: 394 GEFPVRVGE 402


>gi|305682178|ref|ZP_07404982.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           matruchotii ATCC 14266]
 gi|305658651|gb|EFM48154.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           matruchotii ATCC 14266]
          Length = 412

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SR 63
             ++     + V EL+  +K  +E  L +V V G+I+ Y+  +    +Y +L+D    + 
Sbjct: 2   ANHTTPETAWPVRELNSKVKGWIER-LGYVWVEGQITQYKANNRWKFSYLTLRDPEIEAS 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I        L   +    +G   +V GK + + G   + + +  + P G G +L  +E+ 
Sbjct: 61  IQITCNTTLLTSADNPIAQGDRVVVYGKPSFYEGRGSFSLWVTEIRPVGIGAMLARIEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           +++L  EGLF D  K+P+PF+P  I +IT    A  RD+L     R+P ++  I    VQ
Sbjct: 121 RRRLATEGLFDDSRKHPLPFLPNNIGLITGRGSAAERDVLSVSQGRWPDVQFTIINTTVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     EI  A      L E    P  D+II+ARGGGS+EDL  F++E +  A+A    P
Sbjct: 181 GARAVPEIIAA------LTELDANPDVDVIIIARGGGSVEDLLPFSEEALQYAVAECRTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  + D  ADLRA TPT AA+  VP        +  L  R    +   +  
Sbjct: 235 VVSAIGHEPDNPILDNVADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSR 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L ++     L +    L      + +        ++ ++  +      +  ++ + 
Sbjct: 295 EQQQLTAIRSRPVLNDPLTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATL 354

Query: 361 FLIHNIQK 368
                + +
Sbjct: 355 GPAATLAR 362



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 50/161 (31%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    +L + Q + ++  +    +      +   L  +R +      
Sbjct: 252 ADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSREQQQLTAIRSRPVLNDP 311

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              +      + + IT     + H + +    V+     + +     TL RGY  +Q   
Sbjct: 312 LTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATLGPAATLARGYAVVQVVP 371

Query: 468 TNNN---FITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +         +++ I   DG   A  +   P  
Sbjct: 372 RDGRPAEVVMSIDQSPPGSQLRIRVGDGSITAAAMQTTPAD 412


>gi|297202127|ref|ZP_06919524.1| exodeoxyribonuclease VII, large subunit [Streptomyces sviceus ATCC
           29083]
 gi|197713563|gb|EDY57597.1| exodeoxyribonuclease VII, large subunit [Streptomyces sviceus ATCC
           29083]
          Length = 402

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 12/394 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           NS       V E+S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 4   NSTPEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCFRQVFDDVADVVSEGARVVVLAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P+++ ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAAEGLFAPERKKPLPFLPQLVGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L         D+II+ARGGGS+EDL  F+DE +VRA+A+   P++
Sbjct: 183 HAVPQVVQAVKELDAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVASCRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY ADLRA TPT AA+  VP        +  L  R    +   ++ + 
Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRALRDRARRCVESFLQREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L  ++ R      H   R+ +   
Sbjct: 297 RCLAQALARPSIEDPHRMIDERADHVAALADRARRTLGHLLDRADSELTHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              +Q+    +     H+ +   +      L  +
Sbjct: 357 AATLQRGYAVLQRADGHVVRSPDEVTAEETLRAR 390



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 2/132 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + +   +    + V+  L+       + +A   +  E     I     H+  L  R 
Sbjct: 272 EEYERVRALRDRARRCVESFLQREERCLAQALARPSI--EDPHRMIDERADHVAALADRA 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H +    + ++ T   + + +   TL+RGY  +Q  + + +     +  +  +  
Sbjct: 330 RRTLGHLLDRADSELTHTHARVVALSPAATLQRGYAVLQRADGHVVRSPDEVTAEETLRA 389

Query: 488 NFFDGQANAIVI 499
              +G+    V 
Sbjct: 390 RVAEGEFTVRVD 401


>gi|225022960|ref|ZP_03712152.1| hypothetical protein CORMATOL_03006 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944183|gb|EEG25392.1| hypothetical protein CORMATOL_03006 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 412

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SR 63
             ++     + V EL+  +K  +E  L +V V G+I+ Y+  +    +Y +L+D    + 
Sbjct: 2   ANHTTPETAWPVRELNSKVKGWIER-LGYVWVEGQITQYKANNRWKFSYLTLRDPEIEAS 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           I        L   +    +G   +V GK + + G   + + +  + P G G +L  +E+ 
Sbjct: 61  IQITCNTTLLTSADNPIAQGDRVVVYGKPSFYEGRGSFSLWVTEIRPVGIGAMLARIEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           +++L  EGLF D  K+P+PF+P  I +IT    A  RD+L     R+P ++  I    VQ
Sbjct: 121 RRRLATEGLFDDSRKHPLPFLPNNIGLITGRGSAAERDVLSVSQGRWPDVQFTIINTAVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     EI  A      L E    P  D+II+ARGGGS+EDL  F++E +  A+A    P
Sbjct: 181 GARAVPEIIAA------LAELDANPDVDVIIIARGGGSVEDLLPFSEEALQYAVAECRTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  + D  ADLRA TPT AA+  VP        +  L  R    +   +  
Sbjct: 235 VVSAIGHEPDNPILDNVADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSR 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L ++     L +    L      + +        ++ ++  +      +  ++ + 
Sbjct: 295 EQQQLTAIRSRPVLNDPLTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATL 354

Query: 361 FLIHNIQK 368
                + +
Sbjct: 355 GPAATLAR 362



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 50/161 (31%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    +L + Q + ++  +    +      +   L  +R +      
Sbjct: 252 ADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSREQQQLTAIRSRPVLNDP 311

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              +      + + IT     + H + +    V+     + +     TL RGY  +Q   
Sbjct: 312 LTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATLGPAATLARGYAVVQVVP 371

Query: 468 TNNN---FITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +         +++ I   DG   A  +   P  
Sbjct: 372 RDGRPAEVVMSIDQSPPGSQLRIRVGDGSITAAAMQTTPAD 412


>gi|239943960|ref|ZP_04695897.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus
           NRRL 15998]
 gi|239990416|ref|ZP_04711080.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus
           NRRL 11379]
 gi|291447424|ref|ZP_06586814.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus
           NRRL 15998]
 gi|291350371|gb|EFE77275.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus
           NRRL 15998]
          Length = 407

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V E+S  +   ++  L  + V G+I+       +G  + +L+D      + 
Sbjct: 4   NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I ++     A  RD+L+    R+P +R  +    VQG 
Sbjct: 123 SLAAEGLFALDRKQPLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ + E       D+I++ARGGGS+EDL  F+DE ++RA+A    P++
Sbjct: 183 NAVAQVVQAVEELDAMDE------VDVIVVARGGGSVEDLLPFSDEQLIRAVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 296

Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L       A+    + +      +D L       L  ++ R     +H + R+ S   
Sbjct: 297 RGLAHALGRPAMERPQRLVDEREAEVDALLGRSRRVLGHLLDRADSELSHTLARVVSLSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATLER 362



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 6/153 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       +K    + E+ + ++Q+  + LR +      +   L         E
Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 309

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           + +  +      +  L+ R   +L H +    + +S T   + S +   TL+RGY  +Q 
Sbjct: 310 RPQRLVDEREAEVDALLGRSRRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 369

Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVI 499
            + + +       A    +     +G+    V 
Sbjct: 370 PDGHVVRSPDEAGAPGEPLRARVSEGEFTVRVD 402


>gi|256397374|ref|YP_003118938.1| exodeoxyribonuclease VII large subunit [Catenulispora acidiphila
           DSM 44928]
 gi|256363600|gb|ACU77097.1| exodeoxyribonuclease VII, large subunit [Catenulispora acidiphila
           DSM 44928]
          Length = 422

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 106/387 (27%), Positives = 177/387 (45%), Gaps = 13/387 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + ++S + P   V  +S  +   + S L  + V G+++       S   Y  L+D  + 
Sbjct: 1   MAMQSSAEEPI-PVRAVSEAVAGWI-SRLGAIWVEGQLAQINKRPGSQMVYLVLRDPSAD 58

Query: 64  IDAII--WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +   I  ++     +     EG   +V GK   +   S + I  E +   G G LL  LE
Sbjct: 59  VSVQITTFRRVFEAVVPPLTEGARVIVYGKPDFYVPRSSFSIRGEEIRQVGLGELLARLE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL  EGLF  + K P+PF+P  + +IT    A  RD+L+    R+P ++  +    
Sbjct: 119 MLKAKLKAEGLFDPRRKKPLPFLPHCVGLITGRASAAERDVLENAKRRWPGVQFRVVNTD 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +   +I  A+ QL+        P  D+II+ARGGGS+EDL  F+DE ++RA+    
Sbjct: 179 VQGPKAVPQILPALAQLDA------DPEVDVIIIARGGGSVEDLLPFSDEALIRAVGECE 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  AD RA TPT AA+  VP        +  L       + R++
Sbjct: 233 TPVVSAIGHEPDSPILDLVADFRASTPTDAAKRVVPDVAEEMDRVAELRRNAWRSVARIL 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L S  +   L +    +   R  L+ L R    ++   + R      H + R++
Sbjct: 293 EREAMGLASFRQRPVLASPYSMIDGRRNDLEELTRRARSSVGHRLDRASDDLGHTLARVR 352

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVK 385
           +   +  +++    +L    H  +  +
Sbjct: 353 ALSPMATLERGYSIVLAPSGHAVRSAE 379



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 62/173 (35%), Gaps = 5/173 (2%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++   ++       ++    + E+   + ++ +   R +    + +   L   R++    
Sbjct: 250 LVADFRASTPTDAAKRVVPDVAEEMDRVAELRRNAWRSVARILEREAMGLASFRQRPVLA 309

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
              + I      +++L  R    + H++      +  T   +++ +   TL+RGY+ +  
Sbjct: 310 SPYSMIDGRRNDLEELTRRARSSVGHRLDRASDDLGHTLARVRALSPMATLERGYSIVLA 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520
            + + +     ++    + I F  G+ +A V       +          +  E
Sbjct: 370 PSGHAVRSAEEVSEGDVLDIRFASGRVDAAVSEVFRADDASPDIASTEESPSE 422


>gi|317056627|ref|YP_004105094.1| exodeoxyribonuclease VII large subunit [Ruminococcus albus 7]
 gi|315448896|gb|ADU22460.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 7]
          Length = 406

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 125/361 (34%), Positives = 191/361 (52%), Gaps = 13/361 (3%)

Query: 14  EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             +VS+L+  L   +  E       V+GEIS +     +GHA+F++KD  S I  I++ G
Sbjct: 3   VLTVSQLNRMLAFKIKQELKFKGAAVKGEISDFNIHFKTGHAFFTIKDESSSIKCIMFAG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130
            + K++ LPE G+  LV+G +  +      QII   +   G +G +    E  K+KL + 
Sbjct: 63  RVKKLKALPENGMSVLVMGDVEVYEREGSCQIIATEIAMLGNTGIVYAQTELLKEKLKKL 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           G+F  + K  IP +PK +AV+TS  GA ++DIL  +  R+PL  V I+P  VQGD  P  
Sbjct: 123 GIFDQEKKKQIPLVPKKLAVVTSSGGAALQDILNIVGRRYPLCTVEIYPATVQGDTAPAS 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A A+   +           D IIL+RGGGS EDL  FN E +V A+A  + P+ISA+GH
Sbjct: 183 VAAALRAAD-------ISGADTIILSRGGGSSEDLNAFNSECVVMAVAECATPVISAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD TL DYAAD+RAPTP+ AAE+A P    L SS+  ++ARL+      ++ K+  +  
Sbjct: 236 ETDTTLTDYAADMRAPTPSAAAELATPDITDLYSSVNVMKARLDTAFGLYLREKMIDVEK 295

Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L   +  + L  S  RL     +L    E  +       +   ++++     + + 
Sbjct: 296 LDTRLKASSPKRRLIESEKRLKEAETKLRMLFENKLRLSELRLDRAASQLQVLSPFNVLG 355

Query: 368 K 368
           +
Sbjct: 356 R 356



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 3/131 (2%)

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            +  ++     +LR   ++ ++    L       K R+      +K+  T++  +  +K+
Sbjct: 274 MKARLDTAFGLYLREKMIDVEKLDTRLKA--SSPKRRLIESEKRLKEAETKLRMLFENKL 331

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           +     +      LQ  +  N L RGY  +++ ++  +T    L     +L+ F DG AN
Sbjct: 332 RLSELRLDRAASQLQVLSPFNVLGRGYALVEN-DDTAVTSVSELKEGMDVLVRFSDGSAN 390

Query: 496 AIVINKAPPKE 506
           A++      K 
Sbjct: 391 AVITKINDRKA 401


>gi|213161520|ref|ZP_03347230.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 346

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 113/397 (28%), Positives = 171/397 (43%), Gaps = 56/397 (14%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           P+G G L    E+ K KL  EGLF  QHK P+P     + VITS TGA + DIL  +  R
Sbjct: 1   PAGEGLLQQKYEQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRR 60

Query: 170 FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
            P L VII+P  VQGD+ P +I  AI   NT  E       D++I+ RGGGS+EDLW FN
Sbjct: 61  DPSLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFN 114

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           DE + RAI  S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + 
Sbjct: 115 DERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSA 174

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRK 346
           + RL   +   +  +      +   L      L  +R +   +RL + +   LE  I + 
Sbjct: 175 QQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQA 234

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
            +    +  R+        I + +  I + +                             
Sbjct: 235 TQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR--------------------------- 267

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
                               +   +  ++             L++ +   TL RGYT   
Sbjct: 268 --------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVST 307

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            T+   + + + +     +     DG   + V +  P
Sbjct: 308 TTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 344


>gi|290957814|ref|YP_003488996.1| exonuclease VII large subunit XseA [Streptomyces scabiei 87.22]
 gi|260647340|emb|CBG70445.1| putative exonuclease VII large subunit XseA [Streptomyces scabiei
           87.22]
          Length = 408

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 12/381 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYRQVFDTVADVVGEGARVVVLAKPEWYAPRGQLSLRATEIKPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K  +PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAAEGLFAPERKKTLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L         D+I++ARGGGS+EDL  F+DE +VRA+A+   P++
Sbjct: 183 HAVPQVVRAVKELDAL------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVASCRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY ADLRA TPT AA+  VP        +  L  R    +   ++ + 
Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRWLRDRARRCVEAFVEREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L   + R      H   R+ +   
Sbjct: 297 RGLAHALARPSMEDPHRMIDERADHVASLLDRGRRCLGHHLDRAVSELTHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQI 383
              +Q+    +     H+ + 
Sbjct: 357 AATLQRGYAVLQRADGHVVRA 377



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 2/139 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + +   +    + V+  +          +A   M  E     I     H+  L+ R 
Sbjct: 272 EEYERVRWLRDRARRCVEAFVEREERGLAHALARPSM--EDPHRMIDERADHVASLLDRG 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H +    + ++ T   + + +   TL+RGY  +Q  + + +           +  
Sbjct: 330 RRCLGHHLDRAVSELTHTHARVVALSPAATLQRGYAVLQRADGHVVRAPDEAGPDEPLRA 389

Query: 488 NFFDGQANAIVINKAPPKE 506
               G+    V       +
Sbjct: 390 RVAGGEFVVRVEGTGTVAD 408


>gi|257452343|ref|ZP_05617642.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R]
 gi|317058886|ref|ZP_07923371.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R]
 gi|313684562|gb|EFS21397.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R]
          Length = 404

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 113/389 (29%), Positives = 194/389 (49%), Gaps = 13/389 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y VS+ +  +K  +E N    ++ + GE+SG    + SGH YF LKD +S++    +  
Sbjct: 4   IYKVSDFNLKIKRYLEGNYEFKNMIIEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEE 130
               I    +EG +  V   +  +     +Q+++  +      G +   LEK KK++  E
Sbjct: 63  QRRGIPGDLQEGEKVRVFADVGFYENRGDFQLLVRGIEKQNTLGKMYADLEKLKKRMAAE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G FS +HK  +P  PK+I V+T+ TGA ++DI++ I  R P + V I+  KVQG    +E
Sbjct: 123 GYFSLEHKKTLPSYPKVIGVVTALTGAAVQDIIKTIRKRDPRIDVYIYSAKVQGTGAEQE 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I  LN +      P  D +I  RGGGS+EDLW FN E +  A  +S  PIISA+GH
Sbjct: 183 IIAGIEALNRI------PEIDFLIAGRGGGSVEDLWAFNKEEVALAFYHSQKPIISAVGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D  L+D+ AD+RA TPT A E++VP  E     +     +L  +  + +  K   L  
Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGKQSLLRKKQDLQK 296

Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             +   L +  ++    +  L     +L   +E I+ +K +  +  + ++     ++ +Q
Sbjct: 297 RSQNYSLQHFPKSFESYKRDLMYREEQLRRGMEWILEQKKQEHHLALQKMIHLNPMYTLQ 356

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           K    + + ++++  + + +L+     + 
Sbjct: 357 KGYAVLRKGKKNLRSLSEVNLQDEIEIRM 385



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 15/174 (8%), Positives = 46/174 (26%), Gaps = 6/174 (3%)

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
              +  +  +        +     +++      ++ +   + +  Q I+    +      
Sbjct: 225 HSQKPIISAVGHEVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGK 284

Query: 393 LEKKEKIAILHML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                K   L         +            +     ++   +   ++       +  +
Sbjct: 285 QSLLRKKQDLQKRSQNYSLQHFPKSFESYKRDLMYREEQLRRGMEWILEQKKQEHHLALQ 344

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
            +       TL++GY  ++      +     +  +  I I   DG   A V  K
Sbjct: 345 KMIHLNPMYTLQKGYAVLR-KGKKNLRSLSEVNLQDEIEIRMIDGIIKAEVKEK 397


>gi|194592434|gb|ACF76561.1| exonuclease [Streptomyces aureofaciens]
          Length = 401

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              S       V ++S  +   ++  L  V V G+I+       +G  + +L+D  + + 
Sbjct: 2   ANTSSPEAPLPVGKVSALIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPQADVS 60

Query: 66  --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
                ++   +++  + +EG   +V  K   +    +  +    + P G G LL  L++ 
Sbjct: 61  LTVTCFRSVFDQVADVVQEGSRVVVHAKPEWYAARGQLSMRASEIRPVGLGELLARLQQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L  EGLF+ + K  +PF+P+ + ++T    A  RD+L+    R+P +R  +  V VQ
Sbjct: 121 KRRLAGEGLFAAERKRRLPFLPQCVGLVTGRGSAAERDVLEYAWRRWPAVRFEVRNVPVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G      I+        ++E    P  D+II+ARGGGS+EDL  F+DE +VR +A +  P
Sbjct: 181 G------ISAMERVGAAVRELDEHPEVDVIIVARGGGSVEDLLPFSDEGMVRLVAAARTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L D+ ADLRA TPT AA+  VP      + +  L  R    +   ++ 
Sbjct: 235 VVSAIGHEPDQPLLDFVADLRASTPTDAAKRVVPDVGEELAKVRQLRDRARRHVQSRVER 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + + L+ L     L    + L      ++ L       L   +        H + R+ + 
Sbjct: 295 EQHGLDGLRSRPALAAPHRMLDGRGQEVEGLLERARRTLRHRLDHAQSDLGHTLARVVAL 354

Query: 361 FLIHNIQK 368
                +++
Sbjct: 355 SPAATLER 362



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 44/128 (34%), Gaps = 5/128 (3%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + ++ +   Q   +  ++     + + A            +      ++ L+ R    
Sbjct: 278 RQLRDRARRHVQSRVEREQHGLDGLRSRPA-----LAAPHRMLDGRGQEVEGLLERARRT 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L H++    + +  T   + + +   TL+RGY  +Q  +   +T    +     +     
Sbjct: 333 LRHRLDHAQSDLGHTLARVVALSPAATLERGYAVLQRADGTVVTDPAQVTAGEGLHARVA 392

Query: 491 DGQANAIV 498
            G  +  V
Sbjct: 393 GGGFDVAV 400


>gi|307332232|ref|ZP_07611313.1| exodeoxyribonuclease VII, large subunit [Streptomyces
           violaceusniger Tu 4113]
 gi|306882132|gb|EFN13237.1| exodeoxyribonuclease VII, large subunit [Streptomyces
           violaceusniger Tu 4113]
          Length = 414

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 166/373 (44%), Gaps = 12/373 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 12  NTSAEAPIPVGEVSRLIGSWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 70

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I     EG   +V  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 71  VTCFRAVFDRIADTVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 130

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 131 ALAAEGLFAADRKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGV 190

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L      P  D+I++ARGGGS+EDL  F+DE +VRA+A    P++
Sbjct: 191 HAVPQVIEAVKELDAL------PEVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 244

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKIVPDVGEELMRVQQLRERALRSVHGLLDREE 304

Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                      +    + +     R+  +       L  ++ R      H   R+ +   
Sbjct: 305 RGLAAALARPCMREPHRMVDERAERITAVLERARRCLGHLLDRADSELAHTQARVVALSP 364

Query: 363 IHNIQKNRQHILE 375
              +++    +  
Sbjct: 365 AATLRRGYAVLQH 377



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 1/129 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM-LREQTKNRIFYLHTHIKKLITRIEF 429
           + ++  QQ  E+ ++     +  E++   A L      +    +      I  ++ R   
Sbjct: 280 EELMRVQQLRERALRSVHGLLDREERGLAAALARPCMREPHRMVDERAERITAVLERARR 339

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            L H +    + ++ T   + + +   TL+RGY  +Q  + + +     +     +    
Sbjct: 340 CLGHLLDRADSELAHTQARVVALSPAATLRRGYAVLQHPDGSVVRAADEVTEGEELRARV 399

Query: 490 FDGQANAIV 498
            +G+  A V
Sbjct: 400 AEGEFRARV 408


>gi|302542811|ref|ZP_07295153.1| exodeoxyribonuclease VII, large subunit [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460429|gb|EFL23522.1| exodeoxyribonuclease VII, large subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 424

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 12/374 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSAEAPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   +KI     EG   +V  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCFRAVFDKIADTVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 ALAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGT 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L         D+I++ARGGGS+EDL  F+DE +VR +A    P++
Sbjct: 183 HAVPQVIEAVKELDALSA------VDVIVVARGGGSVEDLLPFSDEQLVRTVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        + +L  R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKTVPDVGEELVRIQHLRERALRSVNGLLDREE 296

Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                      L    + +     ++  +       L  ++ R      H   R+ +   
Sbjct: 297 RGLESALARPCLRQPHRMVEEREEQIASVLDRARRCLGHLLDRADSELAHTQARVVALSP 356

Query: 363 IHNIQKNRQHILEK 376
              +++    +   
Sbjct: 357 AATLRRGYAVLQHA 370



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 58/158 (36%), Gaps = 5/158 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI-----FLEKKEKIAILHMLRE 407
           ++  +++       +K    + E+   I+ + ++ LR +       E+  + A+      
Sbjct: 250 LVADLRASTPTDAAKKTVPDVGEELVRIQHLRERALRSVNGLLDREERGLESALARPCLR 309

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           Q    +      I  ++ R    L H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 310 QPHRMVEEREEQIASVLDRARRCLGHLLDRADSELAHTQARVVALSPAATLRRGYAVLQH 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            + + +     +A    +     +G+     +  +   
Sbjct: 370 ADGSVVRAADEVAADEELRARVAEGEFAVRAVGGSAGA 407


>gi|312899120|ref|ZP_07758498.1| exodeoxyribonuclease VII, large subunit [Megasphaera
           micronuciformis F0359]
 gi|310619787|gb|EFQ03369.1| exodeoxyribonuclease VII, large subunit [Megasphaera
           micronuciformis F0359]
          Length = 409

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 115/368 (31%), Positives = 188/368 (51%), Gaps = 12/368 (3%)

Query: 16  SVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SVS +   +K  +E +    +V + G I G +   S+GH Y ++ D+ + I A++++   
Sbjct: 6   SVSTVVGRIKEDLEHDFRLKNVAMEGNIIGLK-RASTGHWYMNIHDDKASIRAVLFRNRA 64

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             +    +EG   +V G++  +     +  IIE L   G G L    EK K +L  +G F
Sbjct: 65  GTMMSTVKEGDRVVVTGEVNVYEKGGTFSFIIERLFSQGVGNLQQQYEKNKAELYAQGYF 124

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              +K  +P  P  + V+TS TGAV+ DI +  + R   + V+++PV VQGD    ++  
Sbjct: 125 DKDNKKELPRFPWKVGVLTSATGAVLHDIQKIRAERNEYIEVVLYPVPVQGDGAAPKLVK 184

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+       E       D++ILARGGGS+EDLW FND  +VRA+ N+ +PII+A+GHETD
Sbjct: 185 ALE------EAGKNRDLDVLILARGGGSMEDLWCFNDPAVVRAVYNTQVPIITAVGHETD 238

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TL DYAAD+RA TPT AAE+A P    +Q  +  L      ++   I+ + +       
Sbjct: 239 TTLVDYAADVRAATPTHAAELAFPSFTDIQLQIAALTETAGRLMDDCIERRFSQWERTAT 298

Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L   ++ +S  +  L+RL        E ++ +K    + I +R +       ++K  
Sbjct: 299 RIRLHQYNEFVSVKKDNLNRLVESARQKTEYLLLQKQHALDKIKSRAEGMNPTAFLRKGY 358

Query: 371 QHILEKQQ 378
             +L+  +
Sbjct: 359 GQLLQNGE 366



 Score = 63.6 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/175 (9%), Positives = 48/175 (27%), Gaps = 6/175 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-- 401
                        +++    H  +       + Q  I  + +   R +    + + +   
Sbjct: 235 HETDTTLVDYAADVRAATPTHAAELAFPSFTDIQLQIAALTETAGRLMDDCIERRFSQWE 294

Query: 402 ---LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                +   Q    +     ++ +L+        + +     ++       +       L
Sbjct: 295 RTATRIRLHQYNEFVSVKKDNLNRLVESARQKTEYLLLQKQHALDKIKSRAEGMNPTAFL 354

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           ++GY  +   N   I     +  K  + +   DG   A V       E+  +  +
Sbjct: 355 RKGYGQLL-QNGEVIVGITAVNRKKPLEVQLVDGIIVAEVKEVIGRGEKNGQIKK 408


>gi|257463629|ref|ZP_05628020.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12]
 gi|317061181|ref|ZP_07925666.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12]
 gi|313686857|gb|EFS23692.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12]
          Length = 404

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 13/389 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y VS+L+  +K  +E N    ++ V GE+SG    + SGH YF LKD +S++    +  
Sbjct: 4   IYKVSDLTVKVKRYLEGNYEFKNMIVEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130
               I    +EG +  +   +  +    ++Q++++ +      GTL   LE  KK++ EE
Sbjct: 63  QRRGIPNDLQEGEKVRIFADVGFYENRGEFQLLVKGIEKQNSLGTLYAELEALKKRMAEE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G FS +HK  +   PK I V+T+ TGA I DI++ +  R P + + I   KVQG    +E
Sbjct: 123 GYFSLEHKRALQKYPKAIGVVTAITGAAIHDIVKTVRKRDPRISIYICSAKVQGIGAEQE 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I  LN +      P  D II  RGGGSIEDLW FN E +  A  +S  PIISA+GH
Sbjct: 183 IVAGIETLNQI------PEIDFIIAGRGGGSIEDLWAFNKEEVAMAFYHSQKPIISAVGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TL 307
           E D  L+D+ AD+RA TPT A E++VP   + +  + +   RL  +  + +  +      
Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELSYYEKEIQSRYDRLQFMGKQYLLKRKQDLQK 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                 L +  + +   +  L      L+ ++E  + RK + ++  +  +     +  +Q
Sbjct: 297 RRQEYVLQHFPKKIENYKRELLHREERLQKSMEAFLERKRQKYHLSLETVIHLNPMKILQ 356

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           K    + +  Q +  + +  L      + 
Sbjct: 357 KGYAVLRKGGQRLRSLEEVSLHEEIEIQM 385



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILH-MLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           E Q   +++     +Y+   K++        + +    +I      +     R++  +  
Sbjct: 271 EIQSRYDRLQFMGKQYLLKRKQDLQKRRQEYVLQHFPKKIENYKRELLHREERLQKSMEA 330

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            ++       ++   +        L++GY  ++      +     ++    I I   DG+
Sbjct: 331 FLERKRQKYHLSLETVIHLNPMKILQKGYAVLR-KGGQRLRSLEEVSLHEEIEIQMMDGK 389

Query: 494 ANAIVINKA 502
             A V  K 
Sbjct: 390 ITAEVKEKK 398


>gi|317407683|gb|EFV87618.1| exodeoxyribonuclease 7 large subunit [Achromobacter xylosoxidans
           C54]
          Length = 255

 Score =  236 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 8/224 (3%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             +V++L+  +  ++E ++  + VRGEIS +    +SGH YF+LKD+ + + A++++G  
Sbjct: 39  ILTVAQLNQAVGQLLERSIPALWVRGEISNFT-QAASGHWYFTLKDSRAAVRAVMFRGRA 97

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           + + F+P  G +  +  +++ +     YQ+ ++++  +G G L  A  + K++L  EGLF
Sbjct: 98  SAVGFVPRAGDQVEIRVRVSLYEPRGDYQLQVDAMRRAGIGNLYEAFLRLKEQLNAEGLF 157

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
               K     +P+ I V+TS   A +RD+L  ++ R P + VII+P  VQG +    +A 
Sbjct: 158 DPARKREPVPLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAGRLAA 217

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
            I   N   E       D ++L RGGGSIEDLW FNDE + R I
Sbjct: 218 QIRLANARCE------VDTLLLVRGGGSIEDLWSFNDEALAREI 255


>gi|326776896|ref|ZP_08236161.1| Exodeoxyribonuclease 7 large subunit [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657229|gb|EGE42075.1| Exodeoxyribonuclease 7 large subunit [Streptomyces cf. griseus
           XylebKG-1]
          Length = 411

 Score =  236 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V E+S  +   ++  L  + V G+I+       +G  + +L+D      + 
Sbjct: 12  NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 70

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 71  VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 130

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P+++ ++     A  RD+L+    R+P +R  +    VQG 
Sbjct: 131 SLAAEGLFALDRKKPLPFLPQLVGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 190

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L+E       D+I++ARGGGS+EDL  F+DE ++R +A    P++
Sbjct: 191 NAVAQVVQAVEELDALQE------VDVIVVARGGGSVEDLLPFSDEQLIRTVAACRTPVV 244

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 304

Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L       A+    + +      +D L       L  ++ R     +H + R+ S   
Sbjct: 305 RGLAHALGRPAMERPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSP 364

Query: 363 IHNIQK 368
              +++
Sbjct: 365 AATLER 370



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       +K    + E+ + ++Q+  + LR +      +   L         E
Sbjct: 258 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 317

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           +    +      +  L+ R   +L H +    + +S T   + S +   TL+RGY  +Q 
Sbjct: 318 RPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 377

Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500
            + + +       A    +     +G+    V  
Sbjct: 378 PDGHVVRSPGEAGAPGEPLRARVSEGEFTVRVDG 411


>gi|300934061|ref|ZP_07149317.1| exodeoxyribonuclease VII large subunit [Corynebacterium resistens
           DSM 45100]
          Length = 434

 Score =  236 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 12/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
           M   SQ+ +     ++V +L+  +K  +E  L H+ V G+++      +   +Y +L+D 
Sbjct: 1   MVSMSQQPNSADSPWAVHQLNVQVKQWIER-LGHIWVEGQVTQVNMKPTWKFSYITLRDV 59

Query: 60  -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
                +   I   TL  +      G   ++ GK   + G   + + +  + P G G LL 
Sbjct: 60  EQEMSVSVTINTSTLQNLPSPLRNGDRVVMYGKPAFYAGRGSFSLWVTQVKPVGIGELLA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ K+ L  EGLF  + K  +PF+P+ + ++T    A  RD+L     R+P ++  + 
Sbjct: 120 RIEQLKRALAAEGLFDSRLKASLPFLPRKVGLVTGRGSAAERDVLAVAHDRWPAVQFEVI 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     E+  A+ +L         P  D+II+ARGGGS+EDL  F++E + R +A
Sbjct: 180 NTAVQGANAVPEVIAALQKL------EANPDVDVIIVARGGGSVEDLLPFSEEALARQVA 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P++SAIGHE D  + D+ ADLRA TPT AA+  VP        +  L +R ++ + 
Sbjct: 234 RMRTPVVSAIGHEPDNPVLDHVADLRAATPTDAAKRVVPDVAAELQYVAELRSRASSALR 293

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L  +      ++  L  +  R  +D      +  L  +I       +    
Sbjct: 294 SWVSQERRRLKDIRTRPVMANPLLPVTAQRDLIDEAVHRKDRALHNVIRHLRSEIHSYKA 353

Query: 356 RIKSDFLIHNIQK 368
           ++ +      + +
Sbjct: 354 QVNALGPSQTLAR 366



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 53/158 (33%), Gaps = 7/158 (4%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q++ E +      ++  +      ++ K      +       +      I + + R +  
Sbjct: 279 QYVAELRSRASSALRSWVSQER--RRLKDIRTRPVMANPLLPVTAQRDLIDEAVHRKDRA 336

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRI 485
           L + I+   + +      + +     TL RGY+ +    +D +    +T   ++A  +++
Sbjct: 337 LHNVIRHLRSEIHSYKAQVNALGPSQTLARGYSIVQVVPRDGSGPQVVTSVEDVAPGSQL 396

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523
            +   DG   A  +   P         Q        +G
Sbjct: 397 RVRVPDGSITAATMGVNPAPGSEATPQQRQGLPPNNKG 434


>gi|182436267|ref|YP_001823986.1| exodeoxyribonuclease VII large subunit [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|226697611|sp|B1W2D9|EX7L_STRGG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|178464783|dbj|BAG19303.1| putative exoribonuclease large subunit [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 403

 Score =  236 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V E+S  +   ++  L  + V G+I+       +G  + +L+D      + 
Sbjct: 4   NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P+++ ++     A  RD+L+    R+P +R  +    VQG 
Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLVGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L+E       D+I++ARGGGS+EDL  F+DE ++R +A    P++
Sbjct: 183 NAVAQVVQAVEELDALQE------VDVIVVARGGGSVEDLLPFSDEQLIRTVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 296

Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L       A+    + +      +D L       L  ++ R     +H + R+ S   
Sbjct: 297 RGLAHALGRPAMERPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATLER 362



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 6/154 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       +K    + E+ + ++Q+  + LR +      +   L         E
Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 309

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           +    +      +  L+ R   +L H +    + +S T   + S +   TL+RGY  +Q 
Sbjct: 310 RPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 369

Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500
            + + +       A    +     +G+    V  
Sbjct: 370 PDGHVVRSPEEAGAPGEPLRARVSEGEFTVRVDG 403


>gi|319779518|ref|YP_004130431.1| Exodeoxyribonuclease VII large subunit [Taylorella equigenitalis
           MCE9]
 gi|317109542|gb|ADU92288.1| Exodeoxyribonuclease VII large subunit [Taylorella equigenitalis
           MCE9]
          Length = 438

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 11/356 (3%)

Query: 7   KNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-RI 64
            N+   P  YSVSEL   LK  +++  + + V GEISG++   S GHAYF+LKD +   +
Sbjct: 17  SNTEPLPKVYSVSELLMDLKSTLKNFFTDIKVVGEISGFKIS-SVGHAYFNLKDENGEVV 75

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
               +  T    +    +G+   + G ++ +  +   Q+II  +   G GTL   LE  K
Sbjct: 76  KCSRFNYTRIPQKTNLRDGLLVEITGSLSVYTKNGDVQLIISKIEEQGKGTLHEQLEALK 135

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183
           +KL EEG+F+ ++    P   K + +++S   A ++D+L  ++ R P   V+I+P  VQG
Sbjct: 136 RKLSEEGIFNKKNDLNPPKFVKSVGIVSSLGAAALKDVLTTLNRRTPFIDVVIYPSLVQG 195

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++ P ++  A+ + ++++        D I+L RGGGSIEDLW FNDE + R I+     I
Sbjct: 196 EQAPGQMITALEKADSMEH-------DAILLVRGGGSIEDLWAFNDESLARKISELKTYI 248

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I  +GHE D++LAD A++ RAPTPT AAE+    K+ L   L++    L  +I   I   
Sbjct: 249 ICGVGHEIDFSLADLASNHRAPTPTAAAEILSKSKDELNKDLVSKSDLLIKLIENYINNL 308

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             TL+  ++ L +    +     ++D     L   L+  + +   + N+I + ++S
Sbjct: 309 GQTLDYKMEMLISPQNLIKIQLSQVDGYKTSLNFALDKKLTKAQNYLNNIHSELRS 364



 Score = 80.2 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 53/150 (35%), Gaps = 2/150 (1%)

Query: 351 NHIINRIKSDF--LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
           + +   + S    LI  I+    ++ +   +  +++      I ++  +       L   
Sbjct: 284 DELNKDLVSKSDLLIKLIENYINNLGQTLDYKMEMLISPQNLIKIQLSQVDGYKTSLNFA 343

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
              ++     ++  + + +  +   +     +        L+++  K  L+RG+  + D+
Sbjct: 344 LDKKLTKAQNYLNNIHSELRSLFKFRFMEFRSIAKNLITSLKAYNPKGVLERGFALVYDS 403

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498
               +   R++     + I F D    A V
Sbjct: 404 KGKLVKTARDVGDGELLKIEFADSAIRAQV 433


>gi|282865349|ref|ZP_06274401.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. ACTE]
 gi|282559822|gb|EFB65372.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. ACTE]
          Length = 413

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
            +       V ++S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 14  TTSPEAPLPVGDVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 72

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 73  VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLVRLEQLKK 132

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I ++     A  RD+L+    R+P +R  +    VQG 
Sbjct: 133 SLAAEGLFALDRKRPLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 192

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E    P  D+I++ARGGGS+EDL  F+DE ++RA+A    P++
Sbjct: 193 HAVNQVVQAVR------ELDGLPEVDVIVVARGGGSVEDLLPFSDEQLIRAVAACRTPVV 246

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  LI  + 
Sbjct: 247 SAIGHEPDSPLLDLVADLRASTPTDAAKKIVPDVGEELDRVQQLRDRALRTVRGLIDREE 306

Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L       ++    + +      +D L       L  ++ R      H   R+ +   
Sbjct: 307 RGLAHALGRSSMERPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSP 366

Query: 363 IHNIQK 368
              +++
Sbjct: 367 AATLER 372



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 6/154 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       +K    + E+   ++Q+  + LR +      +   L         E
Sbjct: 260 LVADLRASTPTDAAKKIVPDVGEELDRVQQLRDRALRTVRGLIDREERGLAHALGRSSME 319

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           + +  +      +  L+ R   +L H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 320 RPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSPAATLERGYAVLQR 379

Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500
            + + +    +  A    +     +G+    V  
Sbjct: 380 PDGHVVRSPADAGAPGGELRARVSEGEFTVRVEG 413


>gi|320008798|gb|ADW03648.1| exodeoxyribonuclease VII, large subunit [Streptomyces flavogriseus
           ATCC 33331]
          Length = 403

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 165/366 (45%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
            +       V ++S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 4   TTSPEAPLPVGDVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   ++I  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLVRLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I +++    A  RD+L+    R+P +R  +    VQG 
Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLIGLVSGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E    P  D+I++ARGGGS+EDL  F+DE ++RA+A    P++
Sbjct: 183 HAVNQVVQAV------HELDGLPEVDVIVVARGGGSVEDLLPFSDEALIRAVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  AD+RA TPT AA+  VP        +  L  R    +  LI  + 
Sbjct: 237 SAIGHEPDSPLLDLVADVRASTPTDAAKKVVPDVGEELDRVQQLRDRALRTVRGLIDREE 296

Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L       ++    + +      +D L       L  ++ R      H   R+ +   
Sbjct: 297 RGLAHALGRSSMERPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATLER 362



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 3/130 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            + + +    + V+  +          +    M  E+ +  +      +  L+ R   +L
Sbjct: 276 RVQQLRDRALRTVRGLIDREERGLAHALGRSSM--ERPQRMVDEREAEVDALVGRSRRVL 333

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILINFF 490
            H +    + ++ T   + + +   TL+RGY  +Q  + + +    +  A    +     
Sbjct: 334 GHLLDRADSELAHTRARVVALSPAATLERGYAVLQRPDGHVVRSPADAGAPGAELRARVS 393

Query: 491 DGQANAIVIN 500
           +G+    V  
Sbjct: 394 EGEFTVRVAE 403


>gi|25027634|ref|NP_737688.1| exodeoxyribonuclease VII large subunit [Corynebacterium efficiens
           YS-314]
 gi|23492916|dbj|BAC17888.1| putative exodeoxyribonuclease, large subunit [Corynebacterium
           efficiens YS-314]
          Length = 447

 Score =  235 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P     S     + V +++  +K+ +E  L H+ V G+++      +   +Y +L+D  
Sbjct: 33  TPVPSAKSTPDTPWPVRDVNNQVKNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 91

Query: 62  SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +          +       ++G   +V GK   + G   + + +  + P G G LL  
Sbjct: 92  QEVSVQLTCPTEIIRNRPTPLKDGDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLAR 151

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ +++L  EGLF    K  +PF+PK + +IT    A  RD+L     R+P ++  +  
Sbjct: 152 IEELRRQLAAEGLFDPARKKRLPFLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVIN 211

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     EI  A      L E    P  D+II+ARGGGS+EDL  F++E + RA+A 
Sbjct: 212 TAVQGASAVPEIIAA------LGELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAA 265

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L  R    +  
Sbjct: 266 AQTPVVSAIGHEPDTPILDNVADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRG 325

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   L S+     L +    +   R  ++R    L  ++  ++  +      +  +
Sbjct: 326 WVAREQQALASIRTRPVLADPMTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQ 385

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 386 VSALGPSATLAR 397



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E++  I Q+  +    +      +   L  +R +      
Sbjct: 287 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 346

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      +++ ++ +   ++H +++  + V+     + +     TL RGY+ +Q   
Sbjct: 347 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 406

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +T        +++ I   DG   A  +N     
Sbjct: 407 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 447


>gi|284043235|ref|YP_003393575.1| exodeoxyribonuclease VII large subunit [Conexibacter woesei DSM
           14684]
 gi|283947456|gb|ADB50200.1| exodeoxyribonuclease VII, large subunit [Conexibacter woesei DSM
           14684]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 102/501 (20%), Positives = 188/501 (37%), Gaps = 62/501 (12%)

Query: 8   NSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
                P  ++V   +  L+  +    + V + GE+  +R   ++   YF L+D    +  
Sbjct: 12  PGSSLPGPFAVGVYADRLRAQL-RGFARVQIFGELWNFRTSRTT--VYFELRDPRGALPC 68

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS----KYQIIIESLIPSGSGTLLTALEK 122
            +W+   + +   P +G + +V G    +PGS+     +      L  +G G LL  +E+
Sbjct: 69  AMWRSDFDALGLEPSDGAQVVVAGGCDYYPGSATSSPSFSFRATDLRVAGEGDLLAQVER 128

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP-VKV 181
            +K L  EGL   Q   P P +P+ I V+T  +G    D+L  +  R     +I+    V
Sbjct: 129 LRKLLAAEGLLEPQKHLPRPLLPRTIGVVTGESGKARDDVLAGLRRRGWSGRLIWGFAPV 188

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           Q       IA A+  L  ++E       D++I+ARGGGS+ DL+ F DE + R +A   +
Sbjct: 189 QDRHAAPAIAQALRDLAAIEE------VDVVIVARGGGSLADLFAFCDETLCRTVALLRV 242

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I+++GH TD TL D  A +   TPT AA+ AV +      + +  E R   +  R   
Sbjct: 243 PVIASVGHHTDRTLIDDVAAVCCSTPTHAAQEAVQLDVAAARATLIRETRRLGLHGRRAV 302

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                  + L       + ++  R R                                  
Sbjct: 303 LDRARTLAGLA--RAPAEHVARHRRR---------------------------------- 326

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                      + ++ + +    ++           ++ +L                 ++
Sbjct: 327 -----------LHQQLRELRASARRRGAREREVTATRLLVLRRRSTVVAAERTRADALLR 375

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
               R+              +   +  L +     TL+RGY  ++ ++   +T       
Sbjct: 376 ADGERLRHTADAATARRARDLERLSLALAAHDPARTLERGYALVERSDGELVTSAEQARA 435

Query: 482 KTRILINFFDGQANAIVINKA 502
             R+ + F DG   A V ++ 
Sbjct: 436 AGRLDLRFHDGAVRATVEDEG 456


>gi|294782264|ref|ZP_06747590.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp.
           1_1_41FAA]
 gi|294480905|gb|EFG28680.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp.
           1_1_41FAA]
          Length = 404

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVC--VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++         + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKVYSVSEFNRMVKSYIDDIDDFQDFYIEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              + +I    +EG    + G +  +    ++Q+++  +      G L   LEK K+K+ 
Sbjct: 61  NYKMKRIPEDLKEGDAIKLFGDVGFYEVKGEFQVLVRHIEKQNALGALFAKLEKVKEKMA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E+G F + HK  +P  PK I V+T+ TGA ++DI++    RF  + + ++P KVQG    
Sbjct: 121 EKGYFDESHKKELPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYVYPAKVQGAGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D+II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDLIIAGRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E++VP KE L  SL + +  L  ++   ++      
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLIKSLDDKKIYLAKLLKSYLEDMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +      L N   T++  R  +      L  +++  + +K   F   I+++     I+ 
Sbjct: 295 SIRMDNYHLKNFPSTINNYRELIVEKEEILTKSIKDFLEQKRHLFEIKIDKVSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYSVSQVKNKRID 370



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + +    ++      I+ +        + ++       + +    ++    L 
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLIKSLDDKKIYLAKLLKSYLEDMKRELS 295

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +       +   + I      I +    +   +   ++       I    +      NTL
Sbjct: 296 IRMDNYHLKNFPSTINNYRELIVEKEEILTKSIKDFLEQKRHLFEIKIDKVSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGY+  Q  N   I    ++     +     +G+  +IV  K
Sbjct: 356 KRGYSVSQVKNKR-IDVLEDVEVNDEMTTILKNGRLISIVKEK 397


>gi|237740655|ref|ZP_04571136.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 2_1_31]
 gi|229422672|gb|EEO37719.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 2_1_31]
          Length = 404

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 13/376 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVC--VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              YSVSE +  +K  ++         + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2   EKIYSVSEFNRMVKSYIDDIDDFQDFYIEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128
              + +I    +EG    + G +  +    ++Q+++  +      G L   LEK K+K+ 
Sbjct: 61  NYKMKRIPEDLKEGDAIKLFGDVGFYEVKGEFQVLVRHIEKQNALGALFAKLEKVKEKMA 120

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           E+G F + HK  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    
Sbjct: 121 EKGYFDESHKKELPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGLGAE 180

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +EI   I  LN ++E       D+II  RGGGSIEDLW FN+E +  A  NS  PIISA+
Sbjct: 181 QEIIKGIETLNKIEE------IDLIIAGRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAV 234

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306
           GHE D+ L+D  AD RA TPT A E+++P KE L  SL + +  L  ++   ++      
Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSIPEKESLIKSLDDKKIYLTKLLKSYLEDMKREL 294

Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +      L N   T++  R  +      L  +++  + +K   F   I+++     I+ 
Sbjct: 295 SIRMDNYHLKNFPSTINNYRELMVEKEEILTKSIKDFLEQKRHLFEVKIDKVSVLNPINT 354

Query: 366 IQKNRQHILEKQQHIE 381
           +++       K + I+
Sbjct: 355 LKRGYSVSQVKNKRID 370



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + +    ++      I+ +        + ++       + +    ++    L 
Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSIPEKESLIKSLDDKKIYLTKLLKSYLEDMKRELS 295

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +       +   + I      + +    +   +   ++       +    +      NTL
Sbjct: 296 IRMDNYHLKNFPSTINNYRELMVEKEEILTKSIKDFLEQKRHLFEVKIDKVSVLNPINTL 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGY+  Q  N   I    ++     +     +G+  +IV  K
Sbjct: 356 KRGYSVSQVKNKR-IDVLEDVEVNDEMTTILKNGRLISIVKEK 397


>gi|302536635|ref|ZP_07288977.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. C]
 gi|302445530|gb|EFL17346.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. C]
          Length = 439

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/394 (25%), Positives = 178/394 (45%), Gaps = 12/394 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V ++S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 4   NTSADAPLPVGQVSRLIGGWIDR-LGQVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   +++  +  EG   +V+ K   +    +  + +  + P G G LL  LE+ K+
Sbjct: 63  VTCFRQVWDEVADVVSEGARVVVLAKPEWYAPRGQLSLRVTEIRPVGIGELLARLERLKR 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLIGLVVGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+        P  D+II+ARGGGS+EDL  F+DE +VR +A +  P++
Sbjct: 183 HAVPQVVQAVKELDAR------PDVDVIIVARGGGSVEDLLPFSDEEVVRTVAAARTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L+ R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELQRVRQLQERGLRALRGLLDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L      +  + +      L+ L       L  ++ R      H + R+ +   
Sbjct: 297 RGLAHALARPVFVHPRRMVEVREDELEALLARSRRTLGHLLDRADSELEHTLARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              +++    +     H+ +   +      L  +
Sbjct: 357 AATLERGYAVLQRADGHVVRAASEVAEGEALRAR 390



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 5/179 (2%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K    + E+ Q + Q+ ++ LR +      +   L     +    
Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELQRVRQLQERGLRALRGLLDREERGLAHALARPVFV 309

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
             +  +      ++ L+ R    L H +    + +  T   + + +   TL+RGY  +Q 
Sbjct: 310 HPRRMVEVREDELEALLARSRRTLGHLLDRADSELEHTLARVVALSPAATLERGYAVLQR 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG 526
            + + +     +A    +      G     V   A P        Q+     E   T G
Sbjct: 370 ADGHVVRAASEVAEGEALRARVAAGGFTVTVAGTAVPAGPSAAPPQVPEAALEGGSTAG 428


>gi|295395779|ref|ZP_06805967.1| exodeoxyribonuclease VII large subunit [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971314|gb|EFG47201.1| exodeoxyribonuclease VII large subunit [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 437

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + VS LS ++K  +E  +S V V G+I  +     +  +Y +++D + 
Sbjct: 21  PATALETTPENPWPVSLLSKNIKRYIER-MSVVWVEGQIIEFNSRGRA--SYLTIRDLND 77

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
           +I     ++   L+++E   + G   +V  K   +    +  +    + P G G LL  L
Sbjct: 78  QISLPVQVFSDVLDRLETPVKAGDHVVVQLKANFWMKIGRLSMQARDIRPVGLGELLARL 137

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K+ L  EGLF    K PIPF+P  I +IT       +D+++  + R+P +   +   
Sbjct: 138 ERLKRLLAAEGLFDPALKKPIPFLPTKIGLITGRNSDAEKDVIRNATLRWPSVEFDVINT 197

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +I  A+ QL+        P  D+II+ARGGGS+EDL  F++E ++RA+A +
Sbjct: 198 AVQGTGAVTQIIAALDQLDAR------PDVDVIIIARGGGSLEDLLPFSNESLIRAVAAA 251

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE D  + D  ADLRA TPT AA+  VP        ++   A +  I+ R 
Sbjct: 252 KTPIVSAIGHEADRPILDEVADLRASTPTDAAKRVVPDFYQEVMDIMQARAVMTGILERF 311

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           I  +   L+S+     L N    ++     +           + I+        H+  +I
Sbjct: 312 ITNEQKGLDSVRSRPVLANPHTIIATRAEEIADWRARAASLTKRILQHGNSTVEHLRTQI 371

Query: 358 KSDFLIHNIQK 368
           ++   ++ + +
Sbjct: 372 RALSPLNTLAR 382



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 49/146 (33%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           ++ +   Q                +K         +       I      I     R   
Sbjct: 292 QEVMDIMQARAVMTGILERFITNEQKGLDSVRSRPVLANPHTIIATRAEEIADWRARAAS 351

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
           +    ++  +++V      +++ +  NTL RGY  +QDT+   +   ++L+T  ++ +  
Sbjct: 352 LTKRILQHGNSTVEHLRTQIRALSPLNTLARGYAIVQDTSGTAVRNTQDLSTGDKLTVTV 411

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515
             G  +A V    P ++   +     
Sbjct: 412 EQGTFDATVTKIHPHRQTTPRSKDTP 437


>gi|257465865|ref|ZP_05630176.1| exodeoxyribonuclease VII large subunit [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917022|ref|ZP_07913262.1| exodeoxyribonuclease VII large subunit [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313690897|gb|EFS27732.1| exodeoxyribonuclease VII large subunit [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 404

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 114/389 (29%), Positives = 195/389 (50%), Gaps = 13/389 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y VS+ +  +K  +E N    ++ + GE+SG    + SGH YF LKD +S++    +  
Sbjct: 4   IYKVSDFNLKIKRYLEGNYEFKNMIIEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEE 130
               I    +EG +  V   +  +     +Q+++  +      G +   LEK KK++  E
Sbjct: 63  QRRGISDDLQEGEKVRVFADVGFYENRGDFQLLVRGIEKQNTLGKMYADLEKLKKRMAAE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G FS +HK  +P  PK+I V+T+ TGA ++DI++ I  R P + V I+  KVQG    +E
Sbjct: 123 GYFSLEHKKTLPSYPKVIGVVTALTGAAVQDIIKTIRKRDPRIDVYIYSAKVQGTGAEQE 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I   I  LN +      P  D +I  RGGGS+EDLW FN E +  A  +S  PIISA+GH
Sbjct: 183 IIAGIETLNRI------PEIDFLIAGRGGGSVEDLWAFNKEDVALAFYHSQKPIISAVGH 236

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TL 307
           E D  L+D+ AD+RA TPT A E++VP  E     +     +L  +  + +  K      
Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGKQSLLRKKQDLQK 296

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
            S    L +  ++    +  L     +L+ N++ I+ RK +  + ++ ++     ++ +Q
Sbjct: 297 RSQNYYLQHFPKSFENYKRELMYREEQLQRNVKWILERKKQEHHLVLQKMIQLNPMNTLQ 356

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           K    +  +++ +  + + +L+     + 
Sbjct: 357 KGYVILQREKKMLRSVEEINLKDEIEIRM 385



 Score = 79.8 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/174 (10%), Positives = 49/174 (28%), Gaps = 6/174 (3%)

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
              +  +  +        +     +++      ++ +   + +  Q I+    +      
Sbjct: 225 HSQKPIISAVGHEVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGK 284

Query: 393 LEKKEKIAILHML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                K   L         +            +     +++  +   ++       +  +
Sbjct: 285 QSLLRKKQDLQKRSQNYYLQHFPKSFENYKRELMYREEQLQRNVKWILERKKQEHHLVLQ 344

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
            +      NTL++GY  +Q      +     +  K  I I   DG+  A V  K
Sbjct: 345 KMIQLNPMNTLQKGYVILQREK-KMLRSVEEINLKDEIEIRMIDGRIKAEVKEK 397


>gi|227548174|ref|ZP_03978223.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079735|gb|EEI17698.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 416

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 180/373 (48%), Gaps = 12/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   +Q  S     + V+ L+  +K  +E  L  + V G+++      +   +Y +L+D 
Sbjct: 1   MTQSTQSKSSPENPWPVARLNSTVKKWIER-LGWLWVEGQLTQINVKPTWKMSYLTLRDT 59

Query: 61  HSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
             ++   +      L  +    ++G   +V+GK + + G   + I I  +   G G LL 
Sbjct: 60  QEQVSVQLTAETSLLRSLATPLKDGDRVVVLGKPSFYAGRGSFSIYITDIRHVGEGELLA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +EK +++L  EGLF    K P+P++P  + +IT    A  RD++     R+P ++  + 
Sbjct: 120 RIEKLRQQLAAEGLFDASRKQPLPYLPATVGLITGKGSAAERDVMSVAQSRWPAVKFRVI 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     E+  A+ QL+           D+II+ARGGGS+EDL  F++E + RA+A
Sbjct: 180 NTAVQGANATPEVIAALRQLDA------DDTVDVIIIARGGGSVEDLLPFSEEALQRAVA 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            +  P++SAIGHE D  + D  ADLRA TPT AA+  VP        +    AR+N  + 
Sbjct: 234 AARTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDAAQEFLFVDEARARMNAALR 293

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             ++ + +T+ +L     L N   +L+  R  + R    +  ++  ++  +    + + +
Sbjct: 294 GWVERERSTITALRSRPVLANPMTSLNQRRDEVQRAVALIRRDVRYLLREESAKVSALRS 353

Query: 356 RIKSDFLIHNIQK 368
           ++ +      + +
Sbjct: 354 QVSALGPSATLAR 366



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 5/112 (4%)

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                 +       +      +++ +  I   + + ++     VS     + +     TL
Sbjct: 305 ALRSRPVLANPMTSLNQRRDEVQRAVALIRRDVRYLLREESAKVSALRSQVSALGPSATL 364

Query: 459 KRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            RGY  +    +D +    +T        +++ I   DG   A  ++ +P  
Sbjct: 365 ARGYAVVQVLPRDGSGPEVVTTIEQSPPGSQLRIRVADGSITAAAMSSSPAD 416


>gi|289769365|ref|ZP_06528743.1| exodeoxyribonuclease VII, large subunit [Streptomyces lividans
           TK24]
 gi|289699564|gb|EFD66993.1| exodeoxyribonuclease VII, large subunit [Streptomyces lividans
           TK24]
          Length = 402

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 12/382 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63
             NS       V E+S  +   ++  L  V V G+I+       +G  + +L+D      
Sbjct: 2   AANSTPESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDIS 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +    ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ 
Sbjct: 61  VSVTCYRQVFDAVADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           KK L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQ
Sbjct: 121 KKALAREGLFAAERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     ++  A+ +L+           D+I++ARGGGS+EDL  F+DE +VRA+A    P
Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +   +  
Sbjct: 235 VVSAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDR 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L   L    + +  + +     ++  L      +L   + R      H   R+ + 
Sbjct: 295 EERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVAL 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQ 382
                +++    +     H  +
Sbjct: 355 SPAATLKRGYAVLQRADGHAVR 376



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            + +   +     F++++E+    A+     +     I      +  L+ R    L H +
Sbjct: 278 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 337

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               + ++ T   + + +   TLKRGY  +Q  + + +     +     +     +G  +
Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 397

Query: 496 AIVI 499
             V 
Sbjct: 398 VRVD 401


>gi|325519975|gb|EGC99217.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. TJI49]
          Length = 236

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 131/238 (55%), Gaps = 10/238 (4%)

Query: 2   NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           +PF+   +         VS L+  +  ++E +   + + GE+S +    +SGH YFS+KD
Sbjct: 5   SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +++  ++++G     EF P EG    V   +T +    + Q+ +E++  +G G L  A
Sbjct: 64  QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
             + K +L  EGLF+ + + P+P  P+ I ++TS   A +RD+L  ++ R P + VI++P
Sbjct: 124 FLRLKAQLEAEGLFAPERRRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             VQG    +++  A+   N  +E       D++++ RGGGSIEDLW FNDE + RAI
Sbjct: 184 APVQGAGAAEKLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAI 235


>gi|282850209|ref|ZP_06259588.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula ATCC
           17745]
 gi|282579702|gb|EFB85106.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula ATCC
           17745]
          Length = 407

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 116/362 (32%), Positives = 172/362 (47%), Gaps = 14/362 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   +       L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG     
Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND  +V AI N+  PIISA+G
Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD R  TP+ AAEMAV     LQ  L   EA L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPITTLQDQLKEKEAYLHEYISYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355

Query: 367 QK 368
            K
Sbjct: 356 IK 357



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     I   Q  +++       YI    ++K   L +L  +         +  
Sbjct: 253 TPSHAAEMAVLPITTLQDQLKEKEAYLHEYISYTLQQKRTDLTLLFNRKLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             +H+++L   +      +  +   S+++  + L+S      + +G+  ++  +N  IT 
Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L     I +   DG   A V           K
Sbjct: 372 VAQLQPNDDIQVTLADGYITATVKEAHKDGRITKK 406


>gi|213585643|ref|ZP_03367469.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 344

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 112/395 (28%), Positives = 169/395 (42%), Gaps = 56/395 (14%)

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171
           G G L    E+ K KL  EGLF  QHK P+P     + VITS TGA + DIL  +  R P
Sbjct: 1   GEGLLQQKYEQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDP 60

Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            L VII+P  VQGD+ P +I  AI   NT  E       D++I+ RGGGS+EDLW FNDE
Sbjct: 61  SLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDE 114

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            + RAI  S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + 
Sbjct: 115 RVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQ 174

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYR 348
           RL   +   +  +      +   L      L  +R +   +RL + +   LE  I +  +
Sbjct: 175 RLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQ 234

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +  R+        I + +  I + +                               
Sbjct: 235 RQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR----------------------------- 265

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                             +   +  ++             L++ +   TL RGYT    T
Sbjct: 266 ------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTT 307

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +   + + + +     +     DG   + V +  P
Sbjct: 308 DGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 342


>gi|50365147|ref|YP_053572.1| exodeoxyribonuclease VII large subunit [Mesoplasma florum L1]
 gi|81827304|sp|Q6F1D5|EX7L_MESFL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|50363703|gb|AAT75688.1| exodeoxyribonuclease VII large subunit [Mesoplasma florum L1]
          Length = 404

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 189/380 (49%), Gaps = 11/380 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +++  +SV+E+S   K  +E +    ++ VRGE+        SGH YFSLKDN S I A+
Sbjct: 1   MENKIFSVAEISQIFKEAIEGSNYFKNIYVRGEVGNLTFN-KSGHVYFSLKDNQSTIAAM 59

Query: 68  IWKGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           IWK   +K+     +EG+E    G++T +  S +       +   G G L    E+R K+
Sbjct: 60  IWKSNAHKLTNLNVKEGMEITCYGRLTYYVPSGRVSFEAVDVSVEGKGDLQEIFEERLKE 119

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           +   G   +  K PI    K I +IT+ +GA I+D++  +  R P + + +FP  VQG+ 
Sbjct: 120 ITALGWTDESRKKPINRFAKNIGLITTDSGAAIKDLITTLKRRMPSVNIYLFPTMVQGET 179

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +IAN I Q N  +     P+ DI+I+ RGGGS EDLW FN+  +++AI +SSIP+IS
Sbjct: 180 AKFDIANKIQQANLFE-----PKLDILIVGRGGGSYEDLWTFNEMKVLKAIVDSSIPVIS 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           A+GHE D TL+DY ADLRA TPT AAE+A    E L   L         +   +   +  
Sbjct: 235 AVGHEPDITLSDYVADLRAATPTAAAELASISTEELLKELAYNYENQIRLFKNVYNNQQL 294

Query: 306 T-LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                  + +   +         L+ + +   +N+  II R      +I ++        
Sbjct: 295 KIEEFKKQNILKINNKYDLQSLDLNYIEKSFINNINNIISRNEMFIENIESKTALLDPKK 354

Query: 365 NIQKNRQHILEKQQHIEQIV 384
            + K    I+ K + I   V
Sbjct: 355 PLDKGFGLIMSKDKQIINSV 374



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 44/167 (26%), Gaps = 4/167 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  +  +  +++       +       E  + +    +  +R        +   + 
Sbjct: 238 HEPDITLSDYVADLRAATPTAAAELASISTEELLKELAYNYENQIRLFKNVYNNQQLKIE 297

Query: 404 MLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
             ++Q   +I   +      +  +       +++ I      +            K  L 
Sbjct: 298 EFKKQNILKINNKYDLQSLDLNYIEKSFINNINNIISRNEMFIENIESKTALLDPKKPLD 357

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           +G+  I   +   I     +     I +   DG+   I+       +
Sbjct: 358 KGFGLIMSKDKQIINSVDKVDINQEIKLVLKDGEIETIIKGVKKHGK 404


>gi|294631175|ref|ZP_06709735.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. e14]
 gi|292834508|gb|EFF92857.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. e14]
          Length = 402

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 12/380 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           ++       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   STSPEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYNISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   LV  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYREVFDAVADVVGEGARVLVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 NLAAEGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E       D+I++ARGGGS+EDL  F+DE +VRA+A    P++
Sbjct: 183 HAVTQVVQAVK------ELDEIEDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY ADLRA TPT AA+  VP        +  L  R        ++ + 
Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRQLRDRARRCAQAHVEREE 296

Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L  ++ R      H   R+ +   
Sbjct: 297 RGLAHALARPCMEDPHRMIDERADHVAALLDRGRRTLRHLLDRADSELAHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQ 382
              +++    +     H+ +
Sbjct: 357 AATLRRGYAVLQRADGHVVR 376



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 2/132 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + + + +    +  + H+          +A      E     I     H+  L+ R 
Sbjct: 272 EEYERVRQLRDRARRCAQAHVEREERGLAHALAR--PCMEDPHRMIDERADHVAALLDRG 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H +    + ++ T   + + +   TL+RGY  +Q  + + +     +     +  
Sbjct: 330 RRTLRHLLDRADSELAHTHARVVALSPAATLRRGYAVLQRADGHVVRDPAEVTADEALRA 389

Query: 488 NFFDGQANAIVI 499
              +G+    V 
Sbjct: 390 RVAEGEFTVRVD 401


>gi|294793722|ref|ZP_06758859.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 3_1_44]
 gi|294455292|gb|EFG23664.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 3_1_44]
          Length = 407

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 14/362 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   +       L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG     
Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND  +V AI N+  PIISA+G
Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD+R  TP+ AAEMAV     LQ  L   E  L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADVRGATPSHAAEMAVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355

Query: 367 QK 368
            K
Sbjct: 356 IK 357



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     I   Q  + +  +    YI    ++K   L +L  +         +  
Sbjct: 253 TPSHAAEMAVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             +H+++L   +      +  +   S+++  + L+S      + +G+  ++  +N  IT 
Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L     I +   DG   A V           K
Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406


>gi|269797980|ref|YP_003311880.1| exodeoxyribonuclease VII large subunit [Veillonella parvula DSM
           2008]
 gi|269094609|gb|ACZ24600.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula DSM
           2008]
          Length = 407

 Score =  233 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 114/362 (31%), Positives = 170/362 (46%), Gaps = 14/362 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   +       L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKIGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG     
Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND  +V AI N+  PIISA+G
Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD R  TP+ A EMAV     LQ  L   E  L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADARGATPSHATEMAVLPITTLQDQLTEKEEYLHEYIRYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAEGHSLALLAQQLESLNPLQMM 355

Query: 367 QK 368
            K
Sbjct: 356 IK 357



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     I   Q  + +  +    YI    ++K   L +L  +         +  
Sbjct: 253 TPSHATEMAVLPITTLQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             +H+++L   +      +  +   S+++  + L+S      + +G+  ++  +N  IT 
Sbjct: 313 QKSHLQELSQTLTNATKERCNAEGHSLALLAQQLESLNPLQMMIKGFAKVEY-DNKPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L     I +   DG   A V           K
Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406


>gi|297157568|gb|ADI07280.1| exodeoxyribonuclease VII large subunit [Streptomyces
           bingchenggensis BCW-1]
          Length = 414

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 165/366 (45%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 12  NTSAETPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 70

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   +K+     EG   +V  K   +    +  +    + P G G LL  LE  KK
Sbjct: 71  VTCFRAVFDKVADTVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLELLKK 130

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 131 SLAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGV 190

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L      P  D+II+ARGGGS+EDL  F+DE +VRA+A  + P++
Sbjct: 191 HAVPQVVEAVQELDAL------PEVDLIIVARGGGSVEDLLPFSDEQLVRAVAACATPVV 244

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R       L+  + 
Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELLRIQQLRERALRSARGLLDREE 304

Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                      +    + +     ++  L       L  ++ R      H   R+ +   
Sbjct: 305 RGLAAALARPCMRQPHRMVDERAEQIAGLLDRGRRCLGHLLDRADSELTHTHARVVALSP 364

Query: 363 IHNIQK 368
              +++
Sbjct: 365 AATLRR 370



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 53/150 (35%), Gaps = 5/150 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK-----IAILHMLRE 407
           ++  +++       +K    + E+   I+Q+ ++ LR        +      A+      
Sbjct: 258 LVADLRASTPTDAAKKVVPDVGEELLRIQQLRERALRSARGLLDREERGLAAALARPCMR 317

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           Q    +      I  L+ R    L H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 318 QPHRMVDERAEQIAGLLDRGRRCLGHLLDRADSELTHTHARVVALSPAATLRRGYAVLQR 377

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAI 497
            +   +     ++    +     +G+    
Sbjct: 378 ADGAVVRAAAEVSEDEELRARVAEGEFTVR 407


>gi|75906487|ref|YP_320783.1| exodeoxyribonuclease VII large subunit [Anabaena variabilis ATCC
           29413]
 gi|75700212|gb|ABA19888.1| Exodeoxyribonuclease VII large subunit [Anabaena variabilis ATCC
           29413]
          Length = 427

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 118/361 (32%), Positives = 188/361 (52%), Gaps = 15/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SVS L+ +L+ ++E +  L  V V GE+S     H SG  +F+L+D    + I  ++W 
Sbjct: 30  LSVSGLTDYLRLLLEDDEQLRQVWVVGEVSSANH-HRSG-LFFTLQDPDGTAAIKCVVWN 87

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + K+  LP  G + +V+G I  +P   +YQ+ +   IP+G G      ++ K +LL E
Sbjct: 88  SQVPKLAQLPIAGEQLIVLGSIRLYPQRGEYQLSVWQAIPAGVGLQALRYQQLKNRLLAE 147

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  Q K  +P  P+ IAV+TSPT A   DI + +  R+P L V+  P  VQG++ P+ 
Sbjct: 148 GLFDPQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKHRYPGLHVLFSPATVQGEQAPES 207

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++          R +++IL+RGGG++E+L  FNDE +VRA+A  SIP+++ IGH
Sbjct: 208 IVKAIARV------EKDGRAEVLILSRGGGAVEELACFNDERVVRAVAECSIPVVTGIGH 261

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +L D AAD+   TPT AAE  VP    L +        L+ +++       N L +
Sbjct: 262 QRDESLVDLAADVCVHTPTAAAEKVVPSLAELYNQHCQRVIALHQVLLHTQTSAENQLQT 321

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L N   D+ L     +L+   + L         +  +H   +  ++ S      +Q
Sbjct: 322 LRNRLQNLRLDRHLQQEAQKLNWQRQRLWQLTMGRSQQAKQHLELLRQKLSSLDPKAVLQ 381

Query: 368 K 368
           +
Sbjct: 382 R 382



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 5/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            ++      +   +         +K    + E      Q V    + +   +      L 
Sbjct: 261 HQRDESLVDLAADVCVHTPTAAAEKVVPSLAELYNQHCQRVIALHQVLLHTQTSAENQLQ 320

Query: 404 MLREQTKN-----RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            LR + +N      +      +     R+  +   + +     + +  + L S   K  L
Sbjct: 321 TLRNRLQNLRLDRHLQQEAQKLNWQRQRLWQLTMGRSQQAKQHLELLRQKLSSLDPKAVL 380

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +RGY  ++  N         LA    + I    G+  A VI   
Sbjct: 381 QRGYAVVKQENGAIARSADELAVGNELFIQLAQGEVKAKVIEVK 424


>gi|302330438|gb|ADL20632.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           pseudotuberculosis 1002]
          Length = 413

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +   S     + V EL+  +K  +E  L H+ V G+I+      S   +Y +L+D  + 
Sbjct: 1   MASSPSAPEHAWPVRELNAKVKGWIEK-LGHLWVEGQITQLNVKPSWKFSYITLRDPEAE 59

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
                      +  +     +G   +V GK   + G   + + +  + P G G LL  +E
Sbjct: 60  ASVQLTCPTQLIRSLTTPLADGDRVVVYGKPAFYTGRGSFSLWVTDIRPVGIGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + +++L +EGLF    K P+PF+P+ I +IT    A  RD+L     R+P +   +    
Sbjct: 120 RLRQQLAQEGLFDAHLKRPLPFLPRNIGLITGRGSAAERDVLAVAQSRWPEVTFTVRNTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG      I +A+ QL+        P  D+II+ARGGGS+EDL  F++E + RA+A ++
Sbjct: 180 VQGARAVTGIISALEQLDA------DPTVDVIIIARGGGSVEDLLPFSEESLQRAVAAAT 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L +R    +   +
Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVIAERELIAELRSRSAAALRSWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + + + + +L     L +    +      L+R+   +   +   +  +      +  ++ 
Sbjct: 294 QREHHMIQALRSRPVLADPLSMVQSHTEDLNRMLASIRKEITYQLNNERSVIGALRGQVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPAATLAR 363



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 48/142 (33%), Gaps = 7/142 (4%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ I E +      ++  ++      +        +     + +      + +++  I 
Sbjct: 274 ERELIAELRSRSAAALRSWVQREHHMIQ--ALRSRPVLADPLSMVQSHTEDLNRMLASIR 331

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLATKT 483
             +++++ +  + +      + +     TL RGY  +Q    +      +T        +
Sbjct: 332 KEITYQLNNERSVIGALRGQVSALGPAATLARGYAVVQVLPRDGTPPEVVTTIDQSPPGS 391

Query: 484 RILINFFDGQANAIVINKAPPK 505
           ++ I   DG   A  +  +P  
Sbjct: 392 QLRIRVSDGSITAASMQTSPAD 413


>gi|21223429|ref|NP_629208.1| exodeoxyribonuclease VII large subunit [Streptomyces coelicolor
           A3(2)]
 gi|14194722|sp|Q9FBM3|EX7L_STRCO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|9967683|emb|CAC05901.1| putative exoribonuclease large subunit [Streptomyces coelicolor
           A3(2)]
 gi|195729447|gb|ACG50791.1| ExA [Streptomyces coelicolor A3(2)]
 gi|195729471|gb|ACG50792.1| ExA [Streptomyces coelicolor A3(2)]
          Length = 402

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 12/382 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63
             NS       V E+S  +   ++  L  V V G+I+       +G  + +L+D      
Sbjct: 2   AANSTPEGPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDIS 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +    ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ 
Sbjct: 61  VSVTCYRQVFDAVADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           KK L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQ
Sbjct: 121 KKALAREGLFAAERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     ++  A+ +L+           D+I++ARGGGS+EDL  F+DE +VRA+A    P
Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +   +  
Sbjct: 235 VVSAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDR 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L   L    + +  + +     ++  L      +L   + R      H   R+ + 
Sbjct: 295 EERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVAL 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQ 382
                +++    +     H  +
Sbjct: 355 SPAATLKRGYAVLQRADGHAVR 376



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            + +   +     F++++E+    A+     +     I      +  L+ R    L H +
Sbjct: 278 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 337

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               + ++ T   + + +   TLKRGY  +Q  + + +     +     +     +G  +
Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 397

Query: 496 AIVI 499
             V 
Sbjct: 398 VRVD 401


>gi|167737457|ref|ZP_02410231.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           14]
          Length = 233

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 8/220 (3%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K   P  P+ I ++TS   A +RD+L  ++ R P + VI++P  VQG    +++A  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
              N  +E       D++I+ RGGGSIEDLW FNDE + R
Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALAR 233


>gi|160947154|ref|ZP_02094321.1| hypothetical protein PEPMIC_01086 [Parvimonas micra ATCC 33270]
 gi|158446288|gb|EDP23283.1| hypothetical protein PEPMIC_01086 [Parvimonas micra ATCC 33270]
          Length = 399

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 13/371 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           + V E+S ++ +++  +  LS++ V GE+S ++   S GH+YFS+KD+ + +  +++K  
Sbjct: 4   FKVKEVSKYISNVLRRDSFLSNISVEGEVSNFKK--SGGHSYFSIKDDEAMLKCVVFKTI 61

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                    +G + +V G + T+   S YQI+ +++   G G L       K+KL +EGL
Sbjct: 62  PIAQSLNLTDGQKVVVTGTVMTYEKGSYYQILCKNVEEVGRGNLYEQFLALKEKLSKEGL 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+ + K PIP  PK I V+T+  GA IRDIL  +  R+ +  +  +P KVQG     EIA
Sbjct: 122 FNSELKKPIPKFPKNIGVVTAKNGAAIRDILNTLRRRYRIANIYFYPAKVQGIGASDEIA 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             +  L++L         D II+ RGGGS EDL  FNDE ++R I N   P+ISA+GHE 
Sbjct: 182 LGVKYLDSL------DFIDTIIVGRGGGSFEDLNAFNDENLIRTIFNCKKPVISAVGHEI 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D  L DY AD RA TPT  AE++    + ++  L   E +LN  I+  I  +   L    
Sbjct: 236 DTMLTDYVADKRAATPTAGAELSSVSMDEIKEFLNQAEKKLNKNILEEISAEKVQLEHFK 295

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           K L   N    ++  +  L+ L + L+  +  I     +  +     ++       + + 
Sbjct: 296 KELEYYNPANRITTLKENLENLKKSLDEKIVSIFKYNKQLLDFKRQSLEIINPNSILDRG 355

Query: 370 RQHILEKQQHI 380
              I   +  I
Sbjct: 356 YSIIYNDKNEI 366



 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 52/136 (38%), Gaps = 2/136 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + ++ + + ++ + + + + +    ++ +     L        NRI  L  +++ L  
Sbjct: 262 MDEIKEFLNQAEKKLNKNILEEISAEKVQLEHFKKELEY--YNPANRITTLKENLENLKK 319

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            ++  +    K     +    + L+     + L RGY+ I +  N  +   + +     +
Sbjct: 320 SLDEKIVSIFKYNKQLLDFKRQSLEIINPNSILDRGYSIIYNDKNEIVKDIKTVNVGDSL 379

Query: 486 LINFFDGQANAIVINK 501
            +   +G+  + V   
Sbjct: 380 KLKVSNGEIISDVKEI 395


>gi|300858159|ref|YP_003783142.1| exodeoxyribonuclease large subunit [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685613|gb|ADK28535.1| exodeoxyribonuclease large subunit [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205881|gb|ADL10223.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           pseudotuberculosis C231]
 gi|308276116|gb|ADO26015.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           pseudotuberculosis I19]
          Length = 413

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +   S     + V EL+  +K  +E  L H+ V G+I+      S   +Y +L+D  + 
Sbjct: 1   MASSPSAPEHAWPVRELNAKVKGWIEK-LGHLWVEGQITQLNVKPSWKFSYITLRDPEAE 59

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
                      +  +     +G   +V GK   + G   + + +  + P G G LL  +E
Sbjct: 60  ASVQLTCPTQLIRSLTTPLADGDRVVVYGKPAFYTGRGSFSLWVTDIRPVGIGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + +++L +EGLF    K P+PF+P+ I +IT    A  RD+L     R+P +   +    
Sbjct: 120 RLRQQLAQEGLFDAHLKRPLPFLPRNIGLITGRGSAAERDVLAVAQSRWPEVTFTVRNTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI +A+ QL+        P  D+II+ARGGGS+EDL  F++E + RA+A ++
Sbjct: 180 VQGARAVTEIISALEQLDA------DPTVDVIIIARGGGSVEDLLPFSEESLQRAVAAAT 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L +R    +   +
Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVIAERELIAELRSRSAAALRSWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + + + + +L     L +    +      L+R+   +   +   +  +      +  ++ 
Sbjct: 294 QREHHMIQALRSRPVLADPLSMVQSHTEDLNRMLASIRKEITYQLNNERSVIGALRGQVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPAATLAR 363



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 48/142 (33%), Gaps = 7/142 (4%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ I E +      ++  ++      +        +     + +      + +++  I 
Sbjct: 274 ERELIAELRSRSAAALRSWVQREHHMIQ--ALRSRPVLADPLSMVQSHTEDLNRMLASIR 331

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLATKT 483
             +++++ +  + +      + +     TL RGY  +Q    +      +T        +
Sbjct: 332 KEITYQLNNERSVIGALRGQVSALGPAATLARGYAVVQVLPRDGTPPEVVTTIDQSPPGS 391

Query: 484 RILINFFDGQANAIVINKAPPK 505
           ++ I   DG   A  +  +P  
Sbjct: 392 QLRIRVSDGSITAASMQTSPAD 413


>gi|210631281|ref|ZP_03296843.1| hypothetical protein COLSTE_00728 [Collinsella stercoris DSM 13279]
 gi|210160106|gb|EEA91077.1| hypothetical protein COLSTE_00728 [Collinsella stercoris DSM 13279]
          Length = 407

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/449 (24%), Positives = 179/449 (39%), Gaps = 55/449 (12%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNH 61
           P     + +    SVS+ +      +      + V GE++G+RG    SGH YF +KD  
Sbjct: 12  PAPPSAAGEDDALSVSQAAELAAGALHGV-PKITVLGEVTGFRGPNARSGHCYFQIKDES 70

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +D I+WKGT +K  F   +G++ L  G    +  + K      S   +G G L   + 
Sbjct: 71  AALDCIVWKGTYDKRAFDLRDGLQVLFTGTFDLYKPTGKMSFKASSFTLAGEGLLRQQVA 130

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +  ++L  EGL   + K  IP     +AV+TS +GAV+ D+ + +  R P + VI    K
Sbjct: 131 QLAERLRREGLMEPERKRRIPVFCTRVAVVTSLSGAVVNDVKRTLRRRNPLVEVICVGAK 190

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+  P E+   + +   +      P PD I+L RGGGS EDL  FNDE + RA+A   
Sbjct: 191 VQGEGAPAELIEGLRRAAAI-----TPAPDCILLVRGGGSFEDLMTFNDEELARAVAACP 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           +P+++ IGHE D ++ D  +D R  TPT AAE   P    L + L   E RL   +  + 
Sbjct: 246 VPVVTGIGHEPDNSICDMVSDRRCSTPTAAAESVAPEFAELVNVLDMREQRLQRSLSAIT 305

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 L+     L                           ++ R         +R    
Sbjct: 306 SSAAADLDGRAARLGR---------------------ATSALLGRFSLAIEGYASRPCLA 344

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
              H + + R  + +      Q                              +      +
Sbjct: 345 DPAHVVDRRRAELAQTSDRFAQACD-------------------------RSLERHAASL 379

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +++  R+    +  +     ++ + T  L
Sbjct: 380 ERMAPRLVGSTTG-LARKRHALDLATSQL 407


>gi|228470079|ref|ZP_04054988.1| exodeoxyribonuclease VII, large subunit [Porphyromonas uenonis
           60-3]
 gi|228308217|gb|EEK17072.1| exodeoxyribonuclease VII, large subunit [Porphyromonas uenonis
           60-3]
          Length = 494

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/511 (19%), Positives = 192/511 (37%), Gaps = 62/511 (12%)

Query: 15  YSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDN------------- 60
           Y+++EL   L+  ++   + +  V GE+SGYRG    GH YF+L D              
Sbjct: 11  YTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLIDKVSDPLHPEAGGGE 70

Query: 61  -HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
             ++I A+IW    N+I             +GI+ L + ++  +      Q+ I+ + PS
Sbjct: 71  LSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YDPRYGLQLDIQDIDPS 129

Query: 112 -GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170
              G +     +  + L   GL     ++P+P   + IA+I+SPT A  +D  + +    
Sbjct: 130 YTLGEVARQRRETLQLLERMGLMERNKQHPMPRPLRRIAIISSPTAAGYQDFTRHLEESA 189

Query: 171 PLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227
               I   +F   +QG   P+ I  A+ ++   +        D++++ RGGG+  DL  F
Sbjct: 190 VAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLVVIIRGGGATADLGTF 244

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           +D  + RA+A  S+P+ S IGH+ D ++ D  +     TPT  A   +       + L  
Sbjct: 245 DDFGVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVATAVIDAWCAEYTLLEE 304

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
              RL    +   +            L    Q L  +              L   +    
Sbjct: 305 AHQRLERSWLEARQTAQ-------TGLERLAQLLRQTTLEQLHREERQMLLLREQLSVSP 357

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-LEKKEKIAILHMLR 406
           R   H  + +        ++  R+ +    +++ +  +     +  L +    + L    
Sbjct: 358 RTLLHNQHTL--------LESQRERLAGAARYLPKSYRHEWDTLLSLFRHRYASYLTAQL 409

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
            + + R   L                    +  T +    +I+++   +  L+RGY  + 
Sbjct: 410 NEWQARQQSLQEK------------RKITTTQRTQIEHLAQIIRAMDPQTVLQRGYAIVH 457

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAI 497
               + +     L     I +   +G  +A 
Sbjct: 458 HK-GDLVKSPSQLREGDDIELRLAEGTLSAT 487


>gi|32129527|sp|Q8FQP1|EX7L_COREF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 413

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                S     + V +++  +K+ +E  L H+ V G+++      +   +Y +L+D    
Sbjct: 1   MPSAKSTPDTPWPVRDVNNQVKNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVEQE 59

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +          +       ++G   +V GK   + G   + + +  + P G G LL  +E
Sbjct: 60  VSVQLTCPTEIIRNRPTPLKDGDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + +++L  EGLF    K  +PF+PK + +IT    A  RD+L     R+P ++  +    
Sbjct: 120 ELRRQLAAEGLFDPARKKRLPFLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVINTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A      L E    P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 180 VQGASAVPEIIAA------LGELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAAAQ 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L  R    +   +
Sbjct: 234 TPVVSAIGHEPDTPILDNVADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L S+     L +    +   R  ++R    L  ++  ++  +      +  ++ 
Sbjct: 294 AREQQALASIRTRPVLADPMTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPSATLAR 363



 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E++  I Q+  +    +      +   L  +R +      
Sbjct: 253 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 312

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      +++ ++ +   ++H +++  + V+     + +     TL RGY+ +Q   
Sbjct: 313 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 372

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +T        +++ I   DG   A  +N     
Sbjct: 373 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 413


>gi|294791861|ref|ZP_06757009.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 6_1_27]
 gi|294457091|gb|EFG25453.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 6_1_27]
          Length = 407

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/362 (31%), Positives = 170/362 (46%), Gaps = 14/362 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   ++      L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMLIGAKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG     
Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND  +V AI N+  PIISA+G
Sbjct: 182 IIAKGIAT------ADADPDVDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD R  TP+ A EM V     LQ  L   E  L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADARGATPSHATEMTVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355

Query: 367 QK 368
            K
Sbjct: 356 IK 357



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     I   Q  + +  +    YI    ++K   L +L  +         +  
Sbjct: 253 TPSHATEMTVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             +H+++L   +      +  +   S+++  + L+S      + +G+  ++  +N  IT 
Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L     I +   DG   A V           K
Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406


>gi|291166550|gb|EFE28596.1| exodeoxyribonuclease VII, large subunit [Filifactor alocis ATCC
           35896]
          Length = 408

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 106/359 (29%), Positives = 184/359 (51%), Gaps = 13/359 (3%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           ++V EL+ ++  +   +  + ++ + GEIS  + IH +G+ YF++KD+  +++AI+++  
Sbjct: 6   WTVGELNRYINQLFKTDPLVQNLYLEGEISSVK-IHGTGNIYFTIKDDIGKVNAIMFRSN 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           +  IE   +EG + +    +  +     Y +I++++   G G L     + K+ L  EGL
Sbjct: 65  VTDIEL-FQEGNQIVCQASVNLYEKEGNYNLIVKNISLKGKGILYLKFLELKETLKSEGL 123

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  ++K  +P  P+ + VITS TGAVI DI+     RF    +I+FP KVQGD   +E+ 
Sbjct: 124 FDSKYKKELPLFPRRVGVITSETGAVIHDIINVSRNRFGKAEIILFPAKVQGDLAVQELM 183

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           + I   N           D IIL RGGG+ E+L  FNDE + R I +S IPIISA+GHET
Sbjct: 184 DGIDYFNQ------KNDVDAIILGRGGGAYEELAPFNDEKLARKIFDSQIPIISAVGHET 237

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D T++D+ AD RA TP+ AAE+  P  + +  +L      L +            L    
Sbjct: 238 DVTISDFVADKRASTPSMAAEILFPNIDTIYENLEQKCFELQHQYRTQFHGLDVLLRDYK 297

Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
           + L        L   R + ++  +E+ +     + + Y        ++ +   ++ +++
Sbjct: 298 EQLTRYTPGWKLQKERAKNNQYLQEMNYIFSEKMIKMYADLEKNKQQLLALNPLNVLER 356



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 1/126 (0%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           Q+  E   +   ++  L+   +     + R     ++        + +  + +I S K+ 
Sbjct: 273 QKCFELQHQYRTQFHGLDVLLRDYKEQLTRYTPGWKLQKERAKNNQYLQEMNYIFSEKMI 332

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
             +  +    + L +    N L+RGY  ++  N   I+  + + ++  I I   DG   A
Sbjct: 333 KMYADLEKNKQQLLALNPLNVLERGYGLVKSKN-RIISSTKEIKSQDMIEIQLKDGMIVA 391

Query: 497 IVINKA 502
            V    
Sbjct: 392 EVSEVH 397


>gi|291302985|ref|YP_003514263.1| exodeoxyribonuclease VII large subunit [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572205|gb|ADD45170.1| exodeoxyribonuclease VII, large subunit [Stackebrandtia nassauensis
           DSM 44728]
          Length = 414

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65
            S     + V  +S+ +   + S L  V   G+I+       +G  + +L+D  + +   
Sbjct: 16  PSTPESPWPVRVVSHKIGEWI-SRLGAVWAEGQITQISRRPGAGFVFLTLRDPAAEVSLT 74

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            +  +  ++  +    +G   +V GK   +PG     +    +   G G LL  LEK KK
Sbjct: 75  VVTTRNVVDACDPPLRDGARVIVHGKPDWYPGRGTLSLRATEIRQVGLGELLARLEKLKK 134

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P+ I +IT    A  RD+L+    R P     +  V VQG 
Sbjct: 135 LLAAEGLFAPERKRPLPFLPRRIGLITGRASAAERDVLENAKTRLPSADFEVREVPVQGP 194

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   ++  A      L E    P  ++IILARGGGS+EDL  F+DE + RA+  +  PI+
Sbjct: 195 QAVPKVLEA------LAELDADPAVEVIILARGGGSVEDLLPFSDETLCRAVFAAKTPIV 248

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+R  TPT A +  VP     +  +     RL   +   I  + 
Sbjct: 249 SAIGHEPDNPLVDFVADVRCSTPTDAGKRVVPDFAEERRGIDQARHRLRQALGGKIDRES 308

Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L ++     L    + +   +  +      +       + +       +   +++   
Sbjct: 309 QALAAMRSRPCLAQPSRIIDDRQDEITHARDRIRRAFTARLDKAAHDVTSLRGHLRALSP 368

Query: 363 IHNIQK 368
              + +
Sbjct: 369 QGTLDR 374



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 2/135 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             + R+ I + +  + Q +   +           +       Q    I      I     
Sbjct: 282 FAEERRGIDQARHRLRQALGGKIDRESQALAAMRSR--PCLAQPSRIIDDRQDEITHARD 339

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           RI    + ++      V+     L++ + + TL RGY  ++  +   +     +     +
Sbjct: 340 RIRRAFTARLDKAAHDVTSLRGHLRALSPQGTLDRGYAIVRRADGAVVRADTEVTASEDL 399

Query: 486 LINFFDGQANAIVIN 500
            +    G+   IV  
Sbjct: 400 RVRLARGELTVIVKE 414


>gi|17229266|ref|NP_485814.1| exodeoxyribonuclease VII large subunit [Nostoc sp. PCC 7120]
 gi|22095667|sp|Q8YW42|EX7L_ANASP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|17130864|dbj|BAB73473.1| exodeoxyribonuclease VII large subunit [Nostoc sp. PCC 7120]
          Length = 412

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 15/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SVS L+ +L+ ++E +  L  V V GE+S     H SG  +F+L+D    + I  ++W 
Sbjct: 15  LSVSGLTDYLRLLLEHDEQLRQVWVVGEVSS-TNHHRSG-LFFTLQDPDGSAAIKCVVWS 72

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + K+  LP  G + +V+G I  +P   +YQ+ +   +P+G G      ++ K +LL E
Sbjct: 73  SQVPKLAQLPVAGEQLIVLGSIRLYPQRGEYQLSVWQAVPAGVGLQALRYQQLKNRLLAE 132

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  Q K  +P  P+ IAV+TSPT A   DI + +  R+P L V+  P  VQG++ P+ 
Sbjct: 133 GLFDPQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKHRYPGLHVLFSPATVQGEQAPES 192

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++          R +++IL+RGGG++E+L  FNDE +VRA+A  SIP+++ IGH
Sbjct: 193 IVKAIARV------EKDGRAEVLILSRGGGAVEELACFNDERVVRAVAECSIPVVTGIGH 246

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +L D  AD+   TPT AAE  VP    L +        L+ +++       N L +
Sbjct: 247 QRDESLVDLVADVCVHTPTAAAEKVVPSLAELSNQHRQRIIALHQVLLHTQTSAENQLQT 306

Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   L N   D+ L     +L+   + L         +  +H   +  ++ S      +Q
Sbjct: 307 LRNRLQNLRLDRHLQQEAQKLNWQRQRLLQLTMGRSQQAKQHLELLRQKLISLDPKSVLQ 366

Query: 368 K 368
           +
Sbjct: 367 R 367



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 5/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            ++      ++  +         +K    + E      Q +    + +   +      L 
Sbjct: 246 HQRDESLVDLVADVCVHTPTAAAEKVVPSLAELSNQHRQRIIALHQVLLHTQTSAENQLQ 305

Query: 404 MLREQTKN-----RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            LR + +N      +      +     R+  +   + +     + +  + L S   K+ L
Sbjct: 306 TLRNRLQNLRLDRHLQQEAQKLNWQRQRLLQLTMGRSQQAKQHLELLRQKLISLDPKSVL 365

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +RGY  ++  N         LA    + I    G+  A VI   
Sbjct: 366 QRGYAVVRQENGAIARSADELAVGNELFIQLAQGEVKAKVIEVE 409


>gi|291437496|ref|ZP_06576886.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis
           ATCC 14672]
 gi|291340391|gb|EFE67347.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis
           ATCC 14672]
          Length = 402

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 12/381 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSAEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYRQVFDAVADVVSEGARVVVHCKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAREGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L         D+II+ARGGGS+EDL  F+DE +VRA+A    P++
Sbjct: 183 HAVPQVVQAVKELDAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEHERVRMLRDRARRCVRALVDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    L +  + +      +  L      +L   + R     +H   R+ +   
Sbjct: 297 RGLAQALARPSLQDPHRMVDARAEEVTALLERGRRSLRHQLDRADSELSHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQI 383
              +++    +        + 
Sbjct: 357 AATLKRGYAVLQRADGQAVRA 377



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 2/132 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + +   +    + V+  +        + +A      +     +      +  L+ R 
Sbjct: 272 EEHERVRMLRDRARRCVRALVDREERGLAQALAR--PSLQDPHRMVDARAEEVTALLERG 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H++    + +S T   + + +   TLKRGY  +Q  +   +     +     +  
Sbjct: 330 RRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGQAVRAPGEVEAGEALRA 389

Query: 488 NFFDGQANAIVI 499
              +G+    V 
Sbjct: 390 RVSEGEFTVRVD 401


>gi|326381853|ref|ZP_08203546.1| exodeoxyribonuclease VII large subunit [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199279|gb|EGD56460.1| exodeoxyribonuclease VII large subunit [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 415

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
              + +     + V  LS+ +   +   L  V V G+++       +  A+ +L+D  + 
Sbjct: 3   APDQANSAESPWPVRTLSFKIADWIHR-LGQVWVEGQLTQINARRGTRTAFLTLRDPAAD 61

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +      G L +      EG   +V G+ + + G     + I  + P G G LL  +E
Sbjct: 62  ISMSVTCDPGLLQRSPVPLTEGTRVVVYGRPSFYAGRGTLSLRITDIRPVGIGELLARIE 121

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180
           + K  L  EGLF  + K P+PF+P  I +I+    A  RD+L   + R+  ++  +    
Sbjct: 122 RVKGLLAAEGLFDARRKRPLPFLPHTIGLISGRASAAQRDVLAVAAARWDAVKFDVRDSP 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG      I   +  L+        P   +II+ARGGGS+EDL  F+DE ++RA+A   
Sbjct: 182 VQGPTAVPSIIEQLAALDA------DPHVQVIIIARGGGSVEDLLPFSDETLLRAVAACR 235

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R  + +   +
Sbjct: 236 TPVVSAIGHEPDSPLLDLVADLRAATPTDAAKQVVPDVAAELDGIAELRRRSAHALRNWV 295

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + + L+ L     L N  + +     R+D   R++  ++  ++  +      + +++ 
Sbjct: 296 HREQHVLDGLRARPVLANPLRMVDDRLDRVDGAVRDIRRSVRHLVTVEEHRTQRLASQLS 355

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 356 TLGPAQTLAR 365



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 8/131 (6%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            +  +  H  +      +++    + +      +       +      +   +  I   +
Sbjct: 282 ELRRRSAHALRNWVHREQHVLDGLRAR-----PVLANPLRMVDDRLDRVDGAVRDIRRSV 336

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRILIN 488
            H +             L +     TL RGY  +Q T+    + +    +L     + I 
Sbjct: 337 RHLVTVEEHRTQRLASQLSTLGPAQTLARGYAVVQRTDGDDRHAVRSVDDLPVGAAVRIR 396

Query: 489 FFDGQANAIVI 499
             DG A A + 
Sbjct: 397 VADGSATAAIT 407


>gi|227501577|ref|ZP_03931626.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens
           ATCC 49725]
 gi|227077602|gb|EEI15565.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens
           ATCC 49725]
          Length = 413

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L ++ V G+++      +   +Y +L+D    
Sbjct: 1   MNQPANTPETPWPVGQVNDQVKGWIER-LGYLWVEGQLTQINYKPTWKLSYLTLRDVQQE 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        L+ +    ++G   +V GK   + G   + +    +   G G LL  +E
Sbjct: 60  KSVQLTCSSSMLHNLPTPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           K + +L  EGLF    K P+P++P+ I +IT    A  RD++     R+P ++  +    
Sbjct: 120 KLRAQLAAEGLFDPARKRPLPYLPQKIGLITGRGSAAERDVMAVARDRWPAVQFRVINTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     E+ +A      L+E     + D+II+ARGGGS+EDL  F++E + RA+  +S
Sbjct: 180 VQGANTVPEVISA------LQELDADAQIDVIIIARGGGSVEDLLPFSEEALQRAVVAAS 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     ++ +    +R+   +   +
Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAVIAEARSRMAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L+++     L +    +   R  ++R+   +   L +++ R+ RH   +  R+ 
Sbjct: 294 ERERRGLDNIRSRPVLADPMTPIRAHREEVERMRTSMRRELRVLLDRETRHVESLRARVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPSATLAR 363



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 7/137 (5%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  I E +  +   ++  +           +    +       I      ++++ T
Sbjct: 271 VAEERAVIAEARSRMAAALRGWVERERRGLDNIRSR--PVLADPMTPIRAHREEVERMRT 328

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-----DTNNNFITQKRNLA 480
            +   L   +      V      + +     TL RGY+ +Q      ++   ++      
Sbjct: 329 SMRRELRVLLDRETRHVESLRARVSALGPSATLARGYSIVQVLPKNGSDPEVVSSYEQSP 388

Query: 481 TKTRILINFFDGQANAI 497
              ++ I   DG   A+
Sbjct: 389 PGAQLRIRVGDGSITAV 405


>gi|145295166|ref|YP_001137987.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum
           R]
 gi|158513589|sp|A4QCY8|EX7L_CORGB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|140845086|dbj|BAF54085.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 417

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 171/372 (45%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +  +   S     + V E++  +K  +E  L H+ V G+++      +   +Y +L+D  
Sbjct: 3   SEKASSKSTPEAPWPVREVNTQVKQWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 61

Query: 62  SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +          +       ++G   +V GK   + G   + + +  + P G G LL  
Sbjct: 62  QEVSVQLTCPTDIIRNRPTPLKDGDRVIVYGKPAFYAGRGTFSLWVTDIRPVGIGELLAR 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ +K+L  EGLF    K  +PF+P  + +IT    A  RD+L     R+P ++  +  
Sbjct: 122 IEELRKRLAAEGLFDPARKKRLPFLPNRVGLITGRGSAAERDVLSVAKDRWPEVQFEVIN 181

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     EI  A+  L+        PR D+II+ARGGGS+EDL  F++E + RA+A 
Sbjct: 182 TAVQGASAVPEIIEALRALDQ------DPRVDVIIIARGGGSVEDLLPFSEEALQRAVAA 235

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L +R    +  
Sbjct: 236 AQTPVVSAIGHEPDTPVLDNVADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRG 295

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++ +   L ++     L +    ++  R  + +    +  ++  ++  +      +  +
Sbjct: 296 WVQREQQALAAIRTRPVLADPMTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQ 355

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 356 VSALGPSATLAR 367



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E++  I Q+  +    +    + +   L  +R +      
Sbjct: 257 ADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRGWVQREQQALAAIRTRPVLADP 316

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      I + +  I   ++H +++    V+     + +     TL RGY+ +Q   
Sbjct: 317 MTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQVSALGPSATLARGYSVVQVIP 376

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANA 496
            +      +T        +++ I   DG   A
Sbjct: 377 RDGSAPEVVTTIEQSPPGSQLRIRVADGSITA 408


>gi|332300437|ref|YP_004442358.1| exodeoxyribonuclease VII, large subunit [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177500|gb|AEE13190.1| exodeoxyribonuclease VII, large subunit [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 499

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 101/526 (19%), Positives = 192/526 (36%), Gaps = 63/526 (11%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLK 58
           M+    + S L    Y+++EL   L+  ++   + +  V GE+SGYRG    GH YF+L 
Sbjct: 1   MSSLEMQASDLVAKRYTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLI 60

Query: 59  DN--------------HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFP 96
           D                ++I A+IW    N+I             +GI+ L + ++  + 
Sbjct: 61  DKASDPLHPELGGGELSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YD 119

Query: 97  GSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155
                Q+ I+ + PS   G +     +  + L   GL     + P+P   + IA+I+SPT
Sbjct: 120 PRYGLQLDIQDIDPSYTLGEVARQRRETLQLLERMGLMERNKQYPMPRPLRRIAIISSPT 179

Query: 156 GAVIRDILQRISCRFPLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212
            A  +D  + +        I   +F   +QG   P+ I  A+ ++   +        D++
Sbjct: 180 AAGYQDFTRHLEESAVAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLV 234

Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272
           ++ RGGG+  DL  F+D  + RA+A  S+P+ S IGH+ D ++ D  +     TPT  A 
Sbjct: 235 VIIRGGGATADLGTFDDFAVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVAT 294

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
             +       + L            RL +       +    L    Q L  +        
Sbjct: 295 AVIDAWCAEYTLLEEAHQ-------RLERAWQEARQTAQTGLERLAQLLRQTTLEQLHRE 347

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
                 L   +           + +        ++  R+ +    +++    +     + 
Sbjct: 348 ERQMLLLREQLSVSPHTLLRDQHAL--------LESQRERLAGAARYLPMRYQLQWDTLL 399

Query: 393 LEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            + + +  + L     Q + R   L                    +  T +    +I+++
Sbjct: 400 TQFRHRYASYLTAQLNQWQARQQSLQEQ------------RKITTTQRTQIEHLAQIIRA 447

Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
              +  L+RGY  +       +     L     I +    G  +A 
Sbjct: 448 MDPQTILQRGYAIVHHK-GELVKSPSQLREGDDIELRLAKGTLSAT 492


>gi|302553895|ref|ZP_07306237.1| exodeoxyribonuclease VII, large subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471513|gb|EFL34606.1| exodeoxyribonuclease VII, large subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 402

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 98/380 (25%), Positives = 169/380 (44%), Gaps = 12/380 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 4   NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V+ K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYRQVFDAVADVVSEGARVVVLAKPEWYAPRGQLSLRATEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P+++ ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 ALAREGLFAPERKKPLPFLPQLVGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E       D+II+ARGGGS+EDL  F+DE ++R +A    P++
Sbjct: 183 HAVPQVVQAVK------ELDAIEDVDVIIVARGGGSVEDLLPFSDEQLIRTVAQCRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ ADLRA TPT AA+  VP        +  L  R    +  L++ + 
Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAALVEREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L   + R      H   R+ +   
Sbjct: 297 RGLAHALARPSIEDPHRMIDERADHVADLLDRGRRCLRHQLDRADSELTHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQ 382
              +++    + +   H  +
Sbjct: 357 AATLKRGYAVLQKADGHAVR 376



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 3/124 (2%)

Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            + +   +      +E++E+    A+     E     I     H+  L+ R    L H++
Sbjct: 278 RLLRDRARRCVAALVEREERGLAHALARPSIEDPHRMIDERADHVADLLDRGRRCLRHQL 337

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               + ++ T   + + +   TLKRGY  +Q  + + +     +     +     +G+ +
Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQKADGHAVRDPGEVEAGEALRARVSEGEFS 397

Query: 496 AIVI 499
             V 
Sbjct: 398 VRVD 401


>gi|29829753|ref|NP_824387.1| exodeoxyribonuclease VII large subunit [Streptomyces avermitilis
           MA-4680]
 gi|81838375|sp|Q82IE7|EX7L_STRAW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|29606862|dbj|BAC70922.1| putative exoribonuclease large subunit [Streptomyces avermitilis
           MA-4680]
          Length = 402

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 12/396 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
             N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I 
Sbjct: 2   AANTSAETPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFMTLRDPSYDIS 60

Query: 66  A--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
                ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ 
Sbjct: 61  VGVTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPIGVGELLARLEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           KK L  EGLF  + K  +PF+P++I ++     A  RD+L+    R+P +R  +  V VQ
Sbjct: 121 KKSLAGEGLFVTERKKALPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     ++  A+ +L+           D+II+ARGGGS+EDL  F+DE +VRA+A    P
Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L DY ADLRA TPT AA+  VP        +  L  R    +  +I+ 
Sbjct: 235 VVSAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEVERVRALRDRARRCVRSVIER 294

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L   L    + +  + +     ++  L       L  ++ R     +H   R+ + 
Sbjct: 295 EERGLAHTLARPSIEDPHRMVDERADQVASLLDRGRRTLGHLLDRADSELSHTHARVVAL 354

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                +++    +     H  +   +      L  +
Sbjct: 355 SPAATLKRGYAVLQRADGHAVRAPDEVTADEVLRAR 390



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 2/129 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +    + V+  +          +A   +  E     +      +  L+ R    
Sbjct: 275 ERVRALRDRARRCVRSVIEREERGLAHTLARPSI--EDPHRMVDERADQVASLLDRGRRT 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L H +    + +S T   + + +   TLKRGY  +Q  + + +     +     +     
Sbjct: 333 LGHLLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGHAVRAPDEVTADEVLRARVA 392

Query: 491 DGQANAIVI 499
           +G+    V 
Sbjct: 393 EGEFTVRVD 401


>gi|313887193|ref|ZP_07820889.1| exodeoxyribonuclease VII, large subunit [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923422|gb|EFR34235.1| exodeoxyribonuclease VII, large subunit [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 499

 Score =  230 bits (587), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 101/526 (19%), Positives = 192/526 (36%), Gaps = 63/526 (11%)

Query: 1   MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLK 58
           M+    + S L    Y+++EL   L+  ++   + +  V GE+SGYRG    GH YF+L 
Sbjct: 1   MSSLEMQASDLVAKRYTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLI 60

Query: 59  DN--------------HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFP 96
           D                ++I A+IW    N+I             +GI+ L + ++  + 
Sbjct: 61  DKASDPLHPELGGGELSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YD 119

Query: 97  GSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155
                Q+ I+ + PS   G +     +  + L   GL     + P+P   + IA+I+SPT
Sbjct: 120 PRYGLQLDIQDIDPSYTLGEVARQRRETLQLLERMGLMERNKQYPMPRPLRRIAIISSPT 179

Query: 156 GAVIRDILQRISCRFPLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212
            A  +D  + +        I   +F   +QG   P+ I  A+ ++   +        D++
Sbjct: 180 AAGYQDFTRHLEESAVAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLV 234

Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272
           ++ RGGG+  DL  F+D  + RA+A  S+P+ S IGH+ D ++ D  +     TPT  A 
Sbjct: 235 VIIRGGGATADLGTFDDFAVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVAT 294

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
             +       + L     RL    +   +            L    Q L  +        
Sbjct: 295 AVIDAWCAEYTLLEEAHQRLERAWLEARQTAQ-------TGLERLAQLLRQTTLEQLHRE 347

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
                 L   +           + +        ++  R+ +    +++    +     + 
Sbjct: 348 ERQMLLLREQLSVSPHTLLRDQHAL--------LESQRERLAGAARYLPMRYQLQWDTLL 399

Query: 393 LEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            + + +  + L     Q + R   L                    +  T +    +I+++
Sbjct: 400 TQFRHRYASYLTAQLNQWQARQQSLQEQ------------RKITTTQRTQIEHLAQIIRA 447

Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
              +  L+RGY  +       +     L     I +    G  +A 
Sbjct: 448 MDPQTILQRGYAIVHHK-GELVKSPSQLREGDDIELRLAKGTLSAT 492


>gi|306835737|ref|ZP_07468741.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens
           ATCC 49726]
 gi|304568368|gb|EFM43929.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens
           ATCC 49726]
          Length = 413

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 16/372 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD---- 59
            +Q  +     + V +++  +K  +E  L ++ V G+++      +   +Y +L+D    
Sbjct: 1   MNQPANTPETPWPVGQVNDQVKGWIER-LGYLWVEGQLTQINYKPTWKLSYLTLRDVQQE 59

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
              ++        L+ +    ++G   +V GK   + G   + +    +   G G LL  
Sbjct: 60  KSVQLTCA--SSMLHNLPTQLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLAR 117

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +EK + +L  EGLF    K P+P++P+ I +IT    A  RD++     R+P ++  +  
Sbjct: 118 IEKLRAQLAAEGLFDPARKRPLPYLPQKIGLITGRGSAAERDVMAVARDRWPAVQFRVIN 177

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     E+ +A      L+E       D+II+ARGGGS+EDL  F++E + RA+  
Sbjct: 178 TAVQGANTVPEVISA------LQELDADAEIDVIIIARGGGSVEDLLPFSEEALQRAVVA 231

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +S P++SAIGHE D  + D  ADLRA TPT AA+  VP     ++ +    +R+   +  
Sbjct: 232 ASTPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAVIAEARSRMAAALRG 291

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++ +   L+++     L +    +   R  ++R+   +   L +++ R+ RH   +  R
Sbjct: 292 WVERERRGLDNIRSRPVLADPMTPIRARREEVERMRTSMRRELRVLLDRETRHVESLRAR 351

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 352 VSALGPSATLAR 363



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 7/137 (5%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  I E +  +   ++  +           +    +       I      ++++ T
Sbjct: 271 VAEERAVIAEARSRMAAALRGWVERERRGLDNIRSR--PVLADPMTPIRARREEVERMRT 328

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480
            +   L   +      V      + +     TL RGY+ +Q    +      ++      
Sbjct: 329 SMRRELRVLLDRETRHVESLRARVSALGPSATLARGYSIVQVLPKDGSDPEVVSSYEQSP 388

Query: 481 TKTRILINFFDGQANAI 497
              ++ I   DG   A+
Sbjct: 389 PGAQLRIRVGDGSITAV 405


>gi|19552246|ref|NP_600248.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|62389911|ref|YP_225313.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|23814087|sp|Q8NRM3|EX7L_CORGL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|21323792|dbj|BAB98418.1| Exonuclease VII, large subunit [Corynebacterium glutamicum ATCC
           13032]
 gi|41325247|emb|CAF19727.1| EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT [Corynebacterium glutamicum
           ATCC 13032]
          Length = 417

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 171/372 (45%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +  +   S     + V E++  +K  +E  L H+ V G+++      +   +Y +L+D  
Sbjct: 3   SEKASSKSTPEAPWPVREVNTQVKQWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 61

Query: 62  SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +          +       ++G   +V GK   + G   + + +  + P G G LL  
Sbjct: 62  QEMSVQLTCPTDIIRNRPTPLKDGDRVIVYGKPAFYAGRGTFSLWVTDIRPVGIGELLAR 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ +K+L  EGLF    K  +PF+P  + +IT    A  RD+L     R+P ++  +  
Sbjct: 122 IEELRKRLAAEGLFDPARKKRLPFLPNRVGLITGRGSAAERDVLSVAKDRWPEVQFEVIN 181

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     EI  A+  L+        PR D+II+ARGGGS+EDL  F++E + RA+A 
Sbjct: 182 TAVQGASAVPEIIEALRVLDQ------DPRVDVIIIARGGGSVEDLLPFSEEALQRAVAA 235

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  +  L +R    +  
Sbjct: 236 AQTPVVSAIGHEPDTPVLDNVADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRG 295

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++ +   L ++     L +    ++  R  + +    +  ++  ++  +      +  +
Sbjct: 296 WVQREQQALAAIRTRPVLADPMTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQ 355

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 356 VSALGPSATLAR 367



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E++  I Q+  +    +    + +   L  +R +      
Sbjct: 257 ADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRGWVQREQQALAAIRTRPVLADP 316

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      I + +  I   ++H +++    V+     + +     TL RGY+ +Q   
Sbjct: 317 MTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQVSALGPSATLARGYSVVQVIP 376

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANA 496
            +      +T        +++ I   DG   A
Sbjct: 377 RDGSAPEVVTTIEQSPPGSQLRIRVADGSITA 408


>gi|189423308|ref|YP_001950485.1| exodeoxyribonuclease VII [Geobacter lovleyi SZ]
 gi|189419567|gb|ACD93965.1| Exodeoxyribonuclease VII [Geobacter lovleyi SZ]
          Length = 526

 Score =  230 bits (586), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 102/527 (19%), Positives = 203/527 (38%), Gaps = 49/527 (9%)

Query: 15  YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------SRIDAI 67
           + +S ++  +  ++E  +S    V+ EIS   G    G  Y  L +        ++I   
Sbjct: 6   FPLSAITKRINELLEPAISKQFWVKAEIS--TGRERGGAFYCDLVETDDGGKIVAKIACT 63

Query: 68  IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPS-GSGTLLT 118
           IW+  L+ I+  F        L  G +     +  F       + +    PS   G +  
Sbjct: 64  IWQRELSTIKELFKARNMDLVLTNGTVVGFLCSLQFSPQYGLSLRVIDADPSIALGEMEL 123

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFPLRVIIF 177
              +  ++L +EGLF    +  +P +P  + +ITS   A   D +Q ++   +  ++ + 
Sbjct: 124 KKREIIERLQKEGLFETNKERFVPILPIRLGLITSSGSAAYNDFIQTLTASGYGFKIYLA 183

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQGD+  K +  A+  L  L         D++++ RGGGS  DL+  ++E I R IA
Sbjct: 184 DAMVQGDQTEKSVLRALDALTGL-------DVDLVLILRGGGSKTDLYFLDNEAISRKIA 236

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+ + IGHE D ++ DY A+    TPT AAE  V     ++  L      L  +  
Sbjct: 237 GYPKPVWTGIGHEIDTSILDYIANRSFKTPTAAAEELVARFVQMRRQLDEATNTLKTVWA 296

Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
             +K   + L   +  +     + L  +   L    +EL   ++  +  +         +
Sbjct: 297 YRLKIDQDYLARAVTGIQQGPRKLLDVTASCLREQAQELRARVQRRLSTEQIGIGRRREK 356

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQH------------LRYIFLEKKEKIAILHM 404
           ++S   +   + + + +  K+Q +   V                R+       ++A+   
Sbjct: 357 LRS-LPLTLTKNHMERLAAKRQELSSGVTHCLTRTGETLSGLKQRFEKERFLRRLAVERE 415

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH--TSVSIT-------TRILQSFAYK 455
             E+ + ++      + K+   +   +  ++K       +++           L++   +
Sbjct: 416 RNEKNRQQLKARFFSVFKMKYMLLTNIKGRLKQERVLQRIALARTSLNDKMATLKAIDPQ 475

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
             LKRG+  +       +    ++A K  I     DG   + V  K 
Sbjct: 476 TVLKRGFALVYSQQGTLVRSIADVAEKQLIQTRLADGSLISEVTAKE 522


>gi|329935245|ref|ZP_08285211.1| exonuclease VII large subunit XseA [Streptomyces griseoaurantiacus
           M045]
 gi|329305068|gb|EGG48927.1| exonuclease VII large subunit XseA [Streptomyces griseoaurantiacus
           M045]
          Length = 448

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 99/381 (25%), Positives = 169/381 (44%), Gaps = 12/381 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           N+       V ++S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSADTPLPVGQVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E       D+I++ARGGGS+EDL  F+DE +VR +A    P++
Sbjct: 183 HAVPQVVQAVK------ELDAHEEVDVIVVARGGGSVEDLLPFSDEQLVRTVAECRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY ADLRA TPT AA+  VP        +  L  R        ++ + 
Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEELEKVRGLRDRARRCAHAFVEREE 296

Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L  ++ R     +H   R+ +   
Sbjct: 297 RGLAHALARPCMEDPHRMVDERADHVASLTDRSRRTLGHLLDRADSELSHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQI 383
              +++    + +   H+ + 
Sbjct: 357 AATLRRGYAVLQKDDGHVVRA 377



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 47/171 (27%), Gaps = 16/171 (9%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +    +     +          +A      E     +     H+  L  R    
Sbjct: 275 EKVRGLRDRARRCAHAFVEREERGLAHALAR--PCMEDPHRMVDERADHVASLTDRSRRT 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L H +    + +S T   + + +   TL+RGY  +Q  + + +     +A    +     
Sbjct: 333 LGHLLDRADSELSHTHARVVALSPAATLRRGYAVLQKDDGHVVRAPEEVAEGEPLRARVA 392

Query: 491 DGQANAIVINKAPPKEQPTKK--------------CQLHNNKREKQGTQGE 527
           +G+    V        +   +                     +   G QG 
Sbjct: 393 EGEFAVRVATAGERAVEQAGQQDRQGQRKRRGRQGTPGTPETQGAPGAQGT 443


>gi|319440950|ref|ZP_07990106.1| exodeoxyribonuclease VII large subunit [Corynebacterium variabile
           DSM 44702]
          Length = 440

 Score =  230 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 172/373 (46%), Gaps = 13/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
           M+      + D P + V  ++  +K  +E  L H+ V G+I+      S   +Y +L+D 
Sbjct: 1   MSESPGPTTADSP-WHVHTVNEKVKGWIER-LGHLWVEGQITQLNMKPSWKLSYITLRDV 58

Query: 60  -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
                I       TL  +    + G   +V GK   +    ++ + +  + P G G +L 
Sbjct: 59  SQEQSIKLTCSTQTLRNLPVPVKNGDRVVVYGKPAFYAVRGEFSLWVSQIRPVGVGEMLA 118

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ K+ L  EGLF  + K P+PF+P  I +IT    A   D+L     R+P +R    
Sbjct: 119 RIEELKRALAAEGLFDPRLKRPLPFLPNRIGLITGRESAAEHDVLSVSRDRWPVVRFETI 178

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG +    I +A+  L         PR D+II+ARGGGS+EDL  F++E + RA++
Sbjct: 179 NTPVQGSQAVPAILDALRTL------EADPRVDVIIVARGGGSVEDLLPFSEEALARAVS 232

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           + + P++SAIGHE D  + D  ADLRA TPT AA+  VP      S +  L  R    + 
Sbjct: 233 SMTTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVAAELSLIAELRGRAAGALR 292

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L S+     L +    ++ +R  ++      +  L +++         +  
Sbjct: 293 SWVANEQRGLASVRSRPVLADPMLPITRAREVVEDARSRNDRALGVLVRTARHQVESLRA 352

Query: 356 RIKSDFLIHNIQK 368
           R+ +      +++
Sbjct: 353 RVNALGPSQTLRR 365



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 5/110 (4%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +       I      ++   +R +  L   +++    V      + +     TL+R
Sbjct: 306 RSRPVLADPMLPITRAREVVEDARSRNDRALGVLVRTARHQVESLRARVNALGPSQTLRR 365

Query: 461 GYTSIQ-----DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           GY  +Q      T    IT   ++   +++ I   DG   A  +      
Sbjct: 366 GYAVVQVVPRDHTPPQVITTVDDVEPGSQLRIRVLDGSVTAAAMGVQKSP 415


>gi|172040297|ref|YP_001800011.1| exodeoxyribonuclease VII large subunit [Corynebacterium urealyticum
           DSM 7109]
 gi|171851601|emb|CAQ04577.1| exodeoxyribonuclease large subunit [Corynebacterium urealyticum DSM
           7109]
          Length = 449

 Score =  230 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 14/369 (3%)

Query: 7   KNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
           + + + P   + VS ++  +K  +E  L  + V G+I+      +   +Y +L+D     
Sbjct: 19  RMNANSPEQPWPVSMVNQKIKGWIER-LGFLWVEGQITQVNMKPTWKLSYITLRDVEKDL 77

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I   +   TL  +     +G   +V GK   + G   + + +  +   G G LL  +E+
Sbjct: 78  SIPLTMNTRTLQNLPTPLRDGDRVVVYGKPAFYAGRGSFSLWVTQVRQVGVGELLARIEQ 137

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K+ L  EGLF  + K+  PF+PK I ++T    A  RD+L     R+P +R  +    V
Sbjct: 138 LKRALSAEGLFDPRLKSAPPFLPKKIGLVTGRGSAAERDVLSVAQQRWPAVRFEVINTAV 197

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     E+  A+ +L            D+II+ARGGGS+EDL  F++E +VRA+A    
Sbjct: 198 QGPNTVPEVVAALQRL------EADEDVDVIIVARGGGSVEDLLPFSEEALVRAVARMRT 251

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  + D  AD+RA TPT AA+  VP     Q ++  L  R    +   ++
Sbjct: 252 PVVSAIGHEPDNPVLDLVADVRAATPTDAAKKVVPDVLGEQQAIAELRQRAVGALRSWVR 311

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L  +      +D  L   R R  ++      +  L +++       + +  ++ +
Sbjct: 312 SERRQLEGVRSRPVLADPLLPLRRQREVIEEAVGRKDRALGLLVRDMRSRISSLRAQVNA 371

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 372 LGPSQTLAR 380



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 7/161 (4%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            +Q I E +Q     ++  +R     ++ +      +       +      I++ + R +
Sbjct: 291 EQQAIAELRQRAVGALRSWVRSER--RQLEGVRSRPVLADPLLPLRRQREVIEEAVGRKD 348

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKT 483
             L   ++   + +S     + +     TL RGY+ +    +D +    +T   +++  +
Sbjct: 349 RALGLLVRDMRSRISSLRAQVNALGPSQTLARGYSIMQVIPRDGSGPAVVTTVADVSPGS 408

Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524
           ++ I   DG   A  +                N   +    
Sbjct: 409 QLRIRVADGSVTAAAMAVERAPGAEASDTARDNAATKTDEE 449


>gi|169628348|ref|YP_001701997.1| exodeoxyribonuclease VII large subunit XseA [Mycobacterium
           abscessus ATCC 19977]
 gi|169240315|emb|CAM61343.1| Probable exodeoxyribonuclease VII large subunit XseA [Mycobacterium
           abscessus]
          Length = 410

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +   +     + V  ++  +   ++  L  V V G+++       S   +  L+D  + 
Sbjct: 1   MADPGTSPENPWPVRAVATRVAKWIDR-LGQVWVEGQLTQIDVRPGSRTVFMVLRDPAAD 59

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +          +        EG + +V GK T + G   + + +  +   G G LL  +E
Sbjct: 60  MSLTVTCPPDMVRNAPVKLTEGTQVVVCGKPTFYTGRGSFSLRLSEIRAVGIGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K P+PF+P  I +IT    A   D+    + R+P ++  I    
Sbjct: 120 RLRQLLAAEGLFDARLKRPVPFLPARIGLITGRASAAEHDVTSVATTRWPAVQFAIRNTP 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A+  L+        P  D+I+LARGGGS+EDL  F+DE + RAI+   
Sbjct: 180 VQGPHAVAEIVAALQALDA------DPSVDVIVLARGGGSVEDLLPFSDETLCRAISACR 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SA+GHE D  L+D  ADLRA TPT AA+  VP     Q+ +++L  R    +   +
Sbjct: 234 TPVVSAVGHEPDNPLSDLVADLRAATPTDAAKKLVPDAAAEQALILDLRRRSAQALRNWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L+ +     L +  + +S  +  +D     L  ++  ++  + +   H+  R+ 
Sbjct: 294 QREQRGLDQVRSRPVLADPLRMVSVRQDEIDGARNALRRDVRRLVDIESQRVEHLTARLT 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 TLGPAATLAR 363



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 49/167 (29%), Gaps = 9/167 (5%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + ++  +++       +K       +Q  I  + ++  + +    + +   L 
Sbjct: 242 HEPDNPLSDLVADLRAATPTDAAKKLVPDAAAEQALILDLRRRSAQALRNWVQREQRGLD 301

Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +R +         +      I      +   +   +      V   T  L +     TL
Sbjct: 302 QVRSRPVLADPLRMVSVRQDEIDGARNALRRDVRRLVDIESQRVEHLTARLTTLGPAATL 361

Query: 459 KRGYTSIQ--DTNN--NFITQKRNLATKTRILINFFDGQANAIVINK 501
            RGY+ +Q    +     +    +      + +   DG   A V  +
Sbjct: 362 ARGYSVVQRVRDDGTVEVLRTVADAPVGAPLRVRVSDGAVTATVTGE 408


>gi|254381903|ref|ZP_04997266.1| exodeoxyribonuclease 7 large subunit [Streptomyces sp. Mg1]
 gi|194340811|gb|EDX21777.1| exodeoxyribonuclease 7 large subunit [Streptomyces sp. Mg1]
          Length = 406

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 101/394 (25%), Positives = 178/394 (45%), Gaps = 12/394 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
           N+       V ++S  +   ++  L  V V G+I+       +G  + +L+D      + 
Sbjct: 4   NTSADAPLPVGQVSRLIGGWIDK-LGQVWVEGQITQLSRRPGAGVVFLTLRDPSHDISLS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   +++     EG   +V+ K   +    +  +    + P G G LL  LE+ K+
Sbjct: 63  VTCFRQVYDEVADAVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLARLERLKR 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLATEGLFALDRKKPLPFLPQLIGLVVGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+ L      P  D+II+ARGGGS+EDL  F+DE +VR +A +  P++
Sbjct: 183 HAAAQVIRAVQELDAL------PEVDVIIVARGGGSVEDLLPFSDEEVVRTVAAARTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L+ R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVNEELERVRQLQGRGLRAVRGLLDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L      +  + +      ++ L       L  ++ R      H + R+ +   
Sbjct: 297 RGLAHALARPVFVHPQRMVETREEEVEALLARSRRTLGHLLDRADSELTHTLARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              +++    +     H+ +  ++      L  +
Sbjct: 357 AATLERGYAVLQRADGHVVRSPEEVAEGDELRAR 390



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 57/153 (37%), Gaps = 5/153 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K    + E+ + + Q+  + LR +      +   L     +    
Sbjct: 250 LVADLRASTPTDAAKKVVPDVNEELERVRQLQGRGLRAVRGLLDREERGLAHALARPVFV 309

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
             +  +      ++ L+ R    L H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 310 HPQRMVETREEEVEALLARSRRTLGHLLDRADSELTHTLARVVALSPAATLERGYAVLQR 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            + + +     +A    +     +G+ +  V  
Sbjct: 370 ADGHVVRSPEEVAEGDELRARVAEGEFHVRVDG 402


>gi|288574983|ref|ZP_06393340.1| exodeoxyribonuclease VII, large subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570724|gb|EFC92281.1| exodeoxyribonuclease VII, large subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 408

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 110/359 (30%), Positives = 181/359 (50%), Gaps = 11/359 (3%)

Query: 10  LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
            +    SV +LS+ +K  +E    +  + V GEI   +  HSSGH YF+L    SRI  +
Sbjct: 6   SNKGILSVDDLSFRIKEAIESYPGMGKIAVHGEIVDLK-RHSSGHCYFTLSGRESRIAGV 64

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++     +   P  G E +V G+++++P    YQ+    L P G G +  A E+ + KL
Sbjct: 65  LFRSDAAGVVKWPRPGDEVVVGGRVSSYPQRGIYQLYARRLFPLGKGAISRAKEELRAKL 124

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            +EG+F+ + K PIP  P+ +  ITS TGA  RD+++ +  R P + +++ P  VQG + 
Sbjct: 125 SKEGIFAPERKRPIPPYPERVLCITSATGAAFRDVVKVMGTRNPSVELVLIPATVQGVDG 184

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
           P EIA A  ++ +          D ++L RGGGS  DL  F+DE +VR+I++  +P++  
Sbjct: 185 PDEIAEAFAKVPSFLPA------DAVLLVRGGGSRGDLNPFDDETVVRSISSCPVPVVVG 238

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +GH+ D+TL+D AAD+R  TP+ AAE  VP + +L S L N + RL   + R I      
Sbjct: 239 VGHQVDFTLSDMAADMRCATPSEAAEAVVPDRTYLYSLLSNGKNRLKKAMEREIDRLATR 298

Query: 307 LNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           +      L       +   +  +D L R      E  +  +      +   +     + 
Sbjct: 299 VVDRETLLTRLVAGDIDRLKKDVDGLSRRAVSATEKTVVSEIGRLAGLSAALDGASPLR 357



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +  +++ +++ +  +     ++  +L  L       I  L   +  L  R      
Sbjct: 277 LSNGKNRLKKAMEREIDRLATRVVDRETLLTRL---VAGDIDRLKKDVDGLSRRAVSATE 333

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             + S    ++  +  L   +    L +GY S +D     ++  +++A   +I ++F DG
Sbjct: 334 KTVVSEIGRLAGLSAALDGASPLRILGKGYVSCRDETGTPVSSVKSMAPGKKISLDFLDG 393

Query: 493 QANAIVIN 500
           +A   V +
Sbjct: 394 RAYCRVES 401


>gi|220908495|ref|YP_002483806.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7425]
 gi|254783698|sp|B8HMX6|EX7L_CYAP4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|219865106|gb|ACL45445.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7425]
          Length = 424

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 195/387 (50%), Gaps = 16/387 (4%)

Query: 4   FSQKNSLDHP-EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
           F+Q N L  P   SV  L+ +++ ++E +  L  V V GE+S     H SG  +F+L+D 
Sbjct: 3   FTQPNLLFPPTVLSVGGLTQYIQTLLEQDEELMQVWVTGEVSS-ASQHRSG-LFFTLQDP 60

Query: 60  -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
                +  I+W   L K+  LP  G + +++G+I  +P   +YQ+++   +P+G G +  
Sbjct: 61  DERVALRCIVWASQLEKLSILPVPGEQVILLGRIRVYPQRGEYQLMVWQALPAGEGLMAL 120

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
              + + +L  EGLF    K P+P  P+ IAV+TSP  A   DI + +S R+P LRV++ 
Sbjct: 121 RYRQLRDRLETEGLFDPARKRPLPPHPQTIAVVTSPQAAAWGDIQRTLSHRYPGLRVLLS 180

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQGD+ P  I  AI ++          R +++IL+RGGG+ ED+  FN E +VRAIA
Sbjct: 181 PALVQGDQAPDSIVAAIERV------EKDGRAEVLILSRGGGATEDMACFNHERVVRAIA 234

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
             SIP+I+ IGH+ D +LAD  AD+   TPT AA++AVP    L +        L     
Sbjct: 235 ECSIPVIAGIGHQRDESLADLVADVHVHTPTAAAQLAVPDLAELYTEHCQRLDHLITAGQ 294

Query: 298 RLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +    N L    + L     ++ L      +  L ++L   +   + ++  H   +  
Sbjct: 295 TRLALAQNQLQHQNRRLKRLPLERQLVQEGRAIAHLKQQLIQTVSQQLQQRLTHQQLLAQ 354

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQ 382
           +++S      +Q+       +   I +
Sbjct: 355 KLQSLDPRAILQRGYAIARRQNGQILR 381



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 53/167 (31%), Gaps = 5/167 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ----QHIEQIVKQ-HLRYIFLEKKEK 398
            ++      ++  +         Q     + E      Q ++ ++     R    + + +
Sbjct: 246 HQRDESLADLVADVHVHTPTAAAQLAVPDLAELYTEHCQRLDHLITAGQTRLALAQNQLQ 305

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                + R   + ++      I  L  ++   +S +++   T   +  + LQS   +  L
Sbjct: 306 HQNRRLKRLPLERQLVQEGRAIAHLKQQLIQTVSQQLQQRLTHQQLLAQKLQSLDPRAIL 365

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           +RGY   +  N   +     L     + +   DGQ    V       
Sbjct: 366 QRGYAIARRQNGQILRTIAALQEGDDLTLQLSDGQVKVQVRKIMAAG 412


>gi|255324402|ref|ZP_05365519.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298308|gb|EET77608.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 413

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L ++ V G+++      +   +Y +L+D    
Sbjct: 1   MNQPANTPDTPWPVGKVNDQVKGWIER-LGYLWVEGQLTQINFKPTWKLSYLTLRDVQQE 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        L  +    ++G   +V GK   + G   + +    +   G G LL  +E
Sbjct: 60  KSVQLTCPSSMLQSLSAPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           K +++L  EGLF    K P+P++P  I +IT    A  RD++     R+P ++  +    
Sbjct: 120 KLRQQLAAEGLFDPARKRPLPYLPHKIGLITGRGSAAERDVMAVAHDRWPAVQFRVLNTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     E+ +A+ QL+        P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 180 VQGANTVPEVIDALQQLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAAAG 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     ++ +    +R+   +   +
Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAIVAEARSRMAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L+++     + +    +   R  ++R    +   +E+++ R+ RH   +  RI 
Sbjct: 294 ERERRGLDNIRSRPVMADPMTPIRARREEVERTRATMRREIEVMVERETRHVESLRARIS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPSATLAR 363



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 42/137 (30%), Gaps = 7/137 (5%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  + E +  +   ++  +           +    +       I      +++   
Sbjct: 271 VAEERAIVAEARSRMAAALRGWVERERRGLDNIRSR--PVMADPMTPIRARREEVERTRA 328

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480
            +   +   ++     V      + +     TL RGY+ +Q    +      +T  +   
Sbjct: 329 TMRREIEVMVERETRHVESLRARISALGPSATLARGYSIVQVVPKDGSGPEVVTSYKQSP 388

Query: 481 TKTRILINFFDGQANAI 497
              ++ I   DG   A+
Sbjct: 389 PGAQLRIRVGDGSITAV 405


>gi|158336480|ref|YP_001517654.1| exodeoxyribonuclease VII large subunit [Acaryochloris marina
           MBIC11017]
 gi|189037857|sp|B0BZ38|EX7L_ACAM1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158306721|gb|ABW28338.1| exodeoxyribonuclease VII, large subunit [Acaryochloris marina
           MBIC11017]
          Length = 418

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 20/422 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M  +     +     SV  L+ +++ ++E +  L  V V GE+S     H SG  +F+L+
Sbjct: 1   MTSYQPNLLVPPEVLSVKGLTDYIQTLLEDDSYLVQVWVEGEVSS-AARHRSG-FFFTLQ 58

Query: 59  D--NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           D    + I  +IW    +++   PE G + L +G+I  +P   +YQ++   L P+G G  
Sbjct: 59  DQQEAASIHCVIWNSYCDQLVIEPEVGEQILALGRIRVYPQRGQYQLMAWQLFPAGEGLR 118

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
               ++ +++L  EGLF    K  +P  P+ + V+TS   A   DI + +  + P L+V+
Sbjct: 119 SLRYQQLRERLTREGLFDPLQKQALPTYPQTVGVVTSHQAAAWGDIKRTLKAQHPGLKVL 178

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
             P KVQG + P+ I  AI ++          R +++I+ARGGG+ EDL  FNDE +VRA
Sbjct: 179 FSPTKVQGKQAPEAIVLAIERV------IKDGRAEVLIVARGGGATEDLACFNDERVVRA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA   IP+IS IGH+ D TLAD  AD+ A TPT AAE  +P     Q+   N  ARL  I
Sbjct: 233 IAECPIPVISGIGHQRDETLADLVADVCAHTPTAAAE-CIPRLTDWQTDYRNCIARLYII 291

Query: 296 IIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           + R +      L      L     D+     +    RL   L H ++  + +  +H   +
Sbjct: 292 LTRQLDVAHEHLLYQKTRLRRLQIDRQFEREQVLRSRLQNHLLHAIKHRLGQAQQHQQLL 351

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK----EKIAILHMLREQT 409
             ++ S      +++    +    Q I +  +Q      L+ +       A +  L+   
Sbjct: 352 QQQLTSLDPTQVLKRGYALVQTTDQQIVRSTQQLQVDQELKVELAEGHFTARVTALQSSP 411

Query: 410 KN 411
           + 
Sbjct: 412 QE 413



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 1/136 (0%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-QTKNRIFYLHTHIKKLITRIEFILS 432
            + +  I ++     R + +  +  +     LR  Q   +         +L   +   + 
Sbjct: 279 TDYRNCIARLYIILTRQLDVAHEHLLYQKTRLRRLQIDRQFEREQVLRSRLQNHLLHAIK 338

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           H++        +  + L S      LKRGY  +Q T+   +   + L     + +   +G
Sbjct: 339 HRLGQAQQHQQLLQQQLTSLDPTQVLKRGYALVQTTDQQIVRSTQQLQVDQELKVELAEG 398

Query: 493 QANAIVINKAPPKEQP 508
              A V       ++ 
Sbjct: 399 HFTARVTALQSSPQEA 414


>gi|302558649|ref|ZP_07310991.1| exodeoxyribonuclease VII, large subunit [Streptomyces griseoflavus
           Tu4000]
 gi|302476267|gb|EFL39360.1| exodeoxyribonuclease VII, large subunit [Streptomyces griseoflavus
           Tu4000]
          Length = 402

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/394 (26%), Positives = 173/394 (43%), Gaps = 12/394 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           N+       V E+S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   NTSAEAPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ KK
Sbjct: 63  VTCYRQVFDAVADVVSEGARVVVHCKPEWYAPRGQLSLRATEIKPVGVGELLARLEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 SLAREGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+ +L+   E       D+II+ARGGGS+EDL  F+DE +VRA+A    P++
Sbjct: 183 HAVPQVVQAMKELDAADE------VDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEAERVRMLRDRARRCVRALLDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      +  L       L   + R      H   R+ +   
Sbjct: 297 RGLAQALARPSIQDPHRMIDARAEEVTALLERARRTLRHQLDRADSELTHTHARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              +++    +     H  +   +      L  +
Sbjct: 357 AATLKRGYAVLQRADGHAVRAPGEVEAGQALRAR 390



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 2/132 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + +   +    + V+  L        + +A   +  +     I      +  L+ R 
Sbjct: 272 EEAERVRMLRDRARRCVRALLDREERGLAQALARPSI--QDPHRMIDARAEEVTALLERA 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H++    + ++ T   + + +   TLKRGY  +Q  + + +     +     +  
Sbjct: 330 RRTLRHQLDRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRAPGEVEAGQALRA 389

Query: 488 NFFDGQANAIVI 499
              +G+ N  V 
Sbjct: 390 RVSEGEFNVRVD 401


>gi|183984328|ref|YP_001852619.1| exodeoxyribonuclease VII (large subunit) XseA [Mycobacterium
           marinum M]
 gi|183177654|gb|ACC42764.1| exodeoxyribonuclease vii (large subunit) XseA [Mycobacterium
           marinum M]
          Length = 415

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 13/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+P +  NS ++P + V  ++  +   ++  L  V V G+++      +S   +  L+D 
Sbjct: 1   MSPAAASNSAENP-FPVRAVAIRVAGWIDR-LGTVWVEGQLAQITIRPNSKTVFMVLRDP 58

Query: 61  HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            + +       +  +        EG + +V GK + + G   + + +  +   G G LL 
Sbjct: 59  AADMSLTVTCPRDLVLSAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLNEIRAVGVGELLA 118

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ ++ L  EGLF  + K PIPF+P  + +IT    A  RD+    + R+P +R  + 
Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNTVGLITGRASAAERDVTTVAATRWPAVRFAVR 178

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     +I  A      L+E  +    D+I++ARGGGS+EDL  F+DE + RAIA
Sbjct: 179 NTAVQGPNAVAQIVEA------LRELDSDLEVDVIVVARGGGSVEDLLPFSDETLCRAIA 232

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+ISA+GHE D  L D  ADLRA TPT AA+ AVP     Q  + +L  R    + 
Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALR 292

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L  L     L +  + L      + R    L  ++  +I  +  +  H+  
Sbjct: 293 NWVSREQRALTQLRSRPVLADPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGA 352

Query: 356 RIKSDFLIHNIQK 368
           R+ +      + +
Sbjct: 353 RLATLGPAATLAR 365



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 52/155 (33%), Gaps = 10/155 (6%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K       +Q+ +  + ++  + +      +   L  LR +    
Sbjct: 253 LVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALRNWVSREQRALTQLRSRPVLA 312

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      I++  + +   +S  I +   ++      L +     TL RGY  +Q 
Sbjct: 313 DPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGARLATLGPAATLARGYAVVQT 372

Query: 468 TN--NN---FITQKRNLATKTRILINFFDGQANAI 497
            +        +         TR+ +   DG   A+
Sbjct: 373 VSTAGQPMEVLRSVDGAPAGTRLRVRVGDGAVTAV 407


>gi|226365339|ref|YP_002783122.1| exodeoxyribonuclease VII large subunit [Rhodococcus opacus B4]
 gi|226243829|dbj|BAH54177.1| exodeoxyribonuclease VII large subunit [Rhodococcus opacus B4]
          Length = 418

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--H 61
            S   S     + V  +S  +   ++  L  V V G+I+       +  A+  L+D    
Sbjct: 9   ASTAPSTAEQPWPVRTVSAKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVD 67

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        L        EG   ++ GK++ + G     + +  +   G G LL  +E
Sbjct: 68  MSLSVTCSPQLLQNSPVPLTEGSRVVMFGKLSFYTGRGSVSLRVTEIRAIGIGELLARIE 127

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + +  L  EGLF  + K P+PF+P  I +IT    A   D+L     R+P +R  +    
Sbjct: 128 RLRALLAAEGLFDPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTP 187

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I +A      LKE    P  D+IILARGGGS+EDL  F+DE + RAI   +
Sbjct: 188 VQGATAVPQILDA------LKELDADPHVDVIILARGGGSVEDLLPFSDETLCRAIVACT 241

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L+D+ ADLRA TPT AA+  VP     Q+ +  L +R    +   +
Sbjct: 242 TPVVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWV 301

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + + + ++ L     L +  + L      ++RL      ++   I  +     H+  R+ 
Sbjct: 302 QRESHLISQLRSRPVLADPVRALDHRSDEVERLREAGRRDISRAIAVEGTTIEHLRARLT 361

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 362 TLGPAATLAR 371



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 58/161 (36%), Gaps = 9/161 (5%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +  +  +++       ++     + +Q  + ++  +    +    + +  ++  LR + 
Sbjct: 256 LSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQRESHLISQLRSRP 315

Query: 410 K-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                   + +    +++L       +S  I    T++      L +     TL RGY+ 
Sbjct: 316 VLADPVRALDHRSDEVERLREAGRRDISRAIAVEGTTIEHLRARLTTLGPAATLARGYSV 375

Query: 465 IQ----DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +Q    D +   +    +    T+I +   DG   A V+ K
Sbjct: 376 VQRIVPDGDPEVLRSIDDAPPGTQIRVRVADGAIRAAVMGK 416


>gi|118616063|ref|YP_904395.1| exodeoxyribonuclease VII large subunit [Mycobacterium ulcerans
           Agy99]
 gi|118568173|gb|ABL02924.1| exodeoxyribonuclease VII (large subunit) XseA [Mycobacterium
           ulcerans Agy99]
          Length = 415

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 13/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+P +  NS ++P + V  ++  +   ++  L  V V G+++      +S   +  L+D 
Sbjct: 1   MSPAAASNSAENP-FPVRAVAIRVAGWIDR-LGTVWVEGQLAQITIRPNSKTVFMVLRDP 58

Query: 61  HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            + +       +  +        EG + +V GK + + G   + + +  +   G G LL 
Sbjct: 59  AADMSLTVTCPRDLVLSAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLNEIRAVGVGELLA 118

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ ++ L  EGLF  + K PIPF+P  + +IT    A  RD+    + R+P +R  + 
Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNTVGLITGRASAAERDVTTAAATRWPAVRFAVR 178

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     +I  A      L+E  +    D+I++ARGGGS+EDL  F+DE + RAIA
Sbjct: 179 NTAVQGPNAVAQIVEA------LRELDSDLEVDVIVVARGGGSVEDLLLFSDETLCRAIA 232

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+ISA+GHE D  L D  ADLRA TPT AA+ AVP     Q  + +L  R    + 
Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALR 292

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L  L     L +  + L      + R    L  ++  +I  +  +  H+  
Sbjct: 293 NWVSREQRALTQLRSHPVLADPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGA 352

Query: 356 RIKSDFLIHNIQK 368
           R+ +      + +
Sbjct: 353 RLATLGPAATLAR 365



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 8/136 (5%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +    H +       +      I++  + 
Sbjct: 275 AEQRLVADLRRRSAQALRNWVSREQRALTQLR---SHPVLADPLKALITRSDEIQRARSA 331

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN--NN---FITQKRNLAT 481
           +   +S  I +   ++      L +     TL RGY  +Q  +        +        
Sbjct: 332 LRRDVSRLISTETENIGHLGARLATLGPAATLARGYAVVQTVSTAGQPMEVLRSVDGAPA 391

Query: 482 KTRILINFFDGQANAI 497
            TR+ +   DG   A+
Sbjct: 392 GTRLRVRVGDGAVTAV 407


>gi|326798869|ref|YP_004316688.1| exonuclease VII, large subunit [Sphingobacterium sp. 21]
 gi|326549633|gb|ADZ78018.1| Exonuclease VII, large subunit [Sphingobacterium sp. 21]
          Length = 510

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/509 (19%), Positives = 200/509 (39%), Gaps = 30/509 (5%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH-----SR 63
            D   +S++E++  ++  +      +  ++ E++       SGH Y  L +       + 
Sbjct: 6   ADKTIFSLAEVARSIQKTIADRYKSLYWIKAEMNKLNHYSHSGHCYPELLEKQEGKVIAE 65

Query: 64  IDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114
           I A +WK    +I            + GI  L+   I+ +       + I  + PS   G
Sbjct: 66  IRATLWKSDYERINQRFVEIIKEPLKNGINILLQASIS-YDPVHGLSLHIVDIDPSYSLG 124

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFP 171
            L    +     L EEGLF      P P +PK IA+++  T   + D L+ I      + 
Sbjct: 125 ELEREKQASIALLKEEGLFEANKLLPFPLLPKRIAIVSVETSKGLADFLKIIDHNSFGYR 184

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
               +FP  +QG++    I + + ++    +     R D++ + RGGG    L  +N+ +
Sbjct: 185 FEYELFPALLQGEKSVISIIDQLAKIRLQLQ-----RFDVVAIIRGGGGEVGLSSYNNVL 239

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           + +AIA   IP+I+ IGH T+ T+++  A   A TP+  A+  +    +    +   E  
Sbjct: 240 LAKAIATFPIPVITGIGHATNETVSELVAYKNAITPSALADYLLQHFHNFARPVTYAEQV 299

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
           L     +L   +   LN+ ++    +    L  ++++L  L        +  + ++   F
Sbjct: 300 LRLKTRQLFDNQQQLLNNNIRYFRMASLNMLHENKHQLANLRNRTLQQSKYQLIQEKGSF 359

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             + +++ +      + + +Q I    Q +++      +      ++   I   L  Q+ 
Sbjct: 360 QRLKSQLSTQS-KRTLMEEKQAITFLGQRLKRENLHLSKRSRQVIRQ---IRDQLIRQSH 415

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
                 H  +  L   +   +   +     S+    R L     ++ LKRGY+       
Sbjct: 416 QIAKKHHAALTTLHKNLAPGIKRLLVEATKSLDNQERHLSILDPQHVLKRGYSI-MLFQG 474

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVI 499
             +T  + L    ++      G+ ++ V 
Sbjct: 475 KAVTDAQVLKVGDKVKTILAFGETDSQVT 503


>gi|206890630|ref|YP_002249463.1| exodeoxyribonuclease VII, large subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742568|gb|ACI21625.1| exodeoxyribonuclease VII, large subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 488

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/510 (20%), Positives = 207/510 (40%), Gaps = 49/510 (9%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL---KDNH--SRIDAIIWK 70
           ++S+    +K +++    +  +  EI+       +GH +  L   KDN   ++  A+IW+
Sbjct: 10  TLSQYLTEIKELIQEVSDYQWIIAEIAKI-DCDKNGHYWIELVEKKDNEIIAQCGAVIWR 68

Query: 71  GTLNKIE-------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEK 122
           G +  I           ++GI+ L IGK T       +++ I  + PS   G +    ++
Sbjct: 69  GNVETISNFYLKTGIEIQKGIKILFIGKATFHEKYG-FKLNILQIDPSFTIGEMALKKKE 127

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPV 179
             ++L +EGL        IP I + IA+++S + A   D L+ +      F     +F  
Sbjct: 128 TIERLTKEGLIDKNKFIKIPLIIQKIAIVSSKSAAGYEDFLKILKENKYGFKFYTKLFDA 187

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+     + NA  + +           D IIL RGGGS+ DL  FND  + + +A  
Sbjct: 188 FVQGETAVNSLINAFQRCSL-----EFKDFDAIILIRGGGSVADLAIFNDYELAKTMALM 242

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP+ + IGH  D T+AD  A +   TP+  A+  +       S + NL+          
Sbjct: 243 PIPVFTGIGHTRDETVADCVASMSFKTPSEVAKFILDRALDFDSKIDNLKQ--------- 293

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                       + L   +  L+    +   L    +  ++    +  +  N I++ I +
Sbjct: 294 ------------RILHKVEAFLNTEISKNQSLQERFKLAVKNSGEKLSQKMNLIVSEIHN 341

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
             L   +   ++ +   +Q++ +     L+   +   E   + + ++ + +  I   +  
Sbjct: 342 GILK-KVHSEKEFLFSLKQNLHKKTNYILKTKEV---EITNLSNRVKMKMRENITRGNFT 397

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479
           IK    ++   L + +   +  +      L   + +N LKRGY+     N   +   +  
Sbjct: 398 IKSYKEKLFTKLKNTLALKNIEIERLREKLHLLSPENILKRGYSITYL-NGKVLKNSQEA 456

Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPT 509
           +   ++ I  + G+    VINK     +P 
Sbjct: 457 SIGVKVQIQLYKGKIYGQVINKEEDYGEPK 486


>gi|282850890|ref|ZP_06260264.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           224-1]
 gi|282557842|gb|EFB63430.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri
           224-1]
          Length = 379

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 121/431 (28%), Positives = 188/431 (43%), Gaps = 55/431 (12%)

Query: 84  IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143
           ++  V G +  +     YQ   +++ P+G G L   L + ++KL +EGLF+  HK  +P 
Sbjct: 1   MKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLAKEGLFNKDHKKRLPL 60

Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202
            P  IAV+TS +GAVI DI+   + RFP   + ++P KVQGDE    I  ++ Q+     
Sbjct: 61  FPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAADTIVASLKQI----- 115

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
                + D++I+ RGGGS+EDLW FN+E +VR I    +P+IS++GHETD TLAD  AD 
Sbjct: 116 QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSVGHETDTTLADLVADA 175

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQT 320
           RA TPT AAE A P    + + ++ L ARL   +   I+ K   L+ L K   L    + 
Sbjct: 176 RAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQILDRLRKAPVLQEPTRI 235

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                 ++D L   L   +   +         +  R+K+                    +
Sbjct: 236 YDQQIQQVDMLSHRLNQAISNQLQHDRSSVRLLQERLKALNPGR--------------RL 281

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
           EQ+ ++    +        A L                                 K    
Sbjct: 282 EQLERERTFIVANLFSTMTAYL---------------------------------KDQRN 308

Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            ++ T + L   +   T+ RGY    D   N +T    L    ++ ++F DGQ    V N
Sbjct: 309 KLNRTMQQLDDISPLKTIGRGYVYTTDQEGNTVTSVDKLEIDEKLKLHFKDGQVQVNVEN 368

Query: 501 KAPPKEQPTKK 511
               K+   +K
Sbjct: 369 IRREKDGNQEK 379


>gi|311740744|ref|ZP_07714571.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304264|gb|EFQ80340.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 413

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L ++ V G+++      +   +Y +L+D    
Sbjct: 1   MNQPANTPDTPWPVGKVNDQVKGWIER-LGYLWVEGQLTQINFKPTWKLSYLTLRDVQQE 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        L  +    ++G   +V GK   + G   + +    +   G G LL  +E
Sbjct: 60  KSVQLTCPSSMLQSLSAPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           K +++L  EGLF    K P+P++P  I +IT    A  RD++     R+P ++  +    
Sbjct: 120 KLRQQLSAEGLFDPARKRPLPYLPHKIGLITGRGSAAERDVMAVAHDRWPAVQFRVLNTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     E+ +A+ QL+        P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 180 VQGANTVPEVIDALQQLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAAAG 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP     ++ +    +R+   +   +
Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAIVAEARSRMAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L+++     + +    +   R  ++R    +   +E+++ R+ RH   +  R+ 
Sbjct: 294 ERERRGLDNIRSRPVMADPMTPIRARREEVERTRATVRREIEVMVERETRHVESLRARVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPSATLAR 363



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 41/137 (29%), Gaps = 7/137 (5%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  + E +  +   ++  +           +    +       I      +++   
Sbjct: 271 VAEERAIVAEARSRMAAALRGWVERERRGLDNIRSR--PVMADPMTPIRARREEVERTRA 328

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480
            +   +   ++     V      + +     TL RGY+ +Q    +      +T      
Sbjct: 329 TVRREIEVMVERETRHVESLRARVSALGPSATLARGYSIVQVVPKDGSGPEVVTSYEQSP 388

Query: 481 TKTRILINFFDGQANAI 497
              ++ I   DG   A+
Sbjct: 389 PGAQLRIRVGDGSITAV 405


>gi|240171093|ref|ZP_04749752.1| exodeoxyribonuclease VII large subunit [Mycobacterium kansasii ATCC
           12478]
          Length = 415

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 16/408 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M   S  NS ++P + V  ++  +   ++  L  V V G+++      +S   +  L+D 
Sbjct: 1   MTRASDANSAENP-FPVRAVAIRVASWIDR-LGTVWVEGQLAQITMRPNSKTVFMVLRDP 58

Query: 61  HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            +   ++    +  +        EG + +V GK + + G   + + +  +   G G LL 
Sbjct: 59  AADMSLNVTCPRDLILGAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLA 118

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ ++ L  EGLF  + K PIPF+P +I +IT    A  RD+    + R+P +R  + 
Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVTTVAATRWPAVRFAVR 178

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     +I  A+  L+   E       D+I+LARGGGS+EDL  F+DE + RAI+
Sbjct: 179 NTAVQGPNAVVQIVEALRDLDRHFE------VDVIVLARGGGSVEDLLPFSDETLCRAIS 232

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+ISA+GHE D  L D  ADLRA TPT AA+  VP     Q  +++L  R    + 
Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDTAAEQRLIVDLRRRSAQALR 292

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L  L     L +  + L+     + R    +  ++  +I  +     H+  
Sbjct: 293 NWVSREERALAHLRNRPVLADPLKALTARHDEIQRARSAVRRDINRLIAAETERVGHLSA 352

Query: 356 RIKSDFLIHNIQKNR---QHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
           R+ +      + +     Q +    Q    +   H        + ++A
Sbjct: 353 RLTTLGPAATLARGYAVVQRLSAAGQPTGVLRSVHDAPAGTRLRVRVA 400



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 52/154 (33%), Gaps = 10/154 (6%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       ++       +Q+ I  + ++  + +      +   L  LR +    
Sbjct: 253 LVADLRAATPTDAAKRVVPDTAAEQRLIVDLRRRSAQALRNWVSREERALAHLRNRPVLA 312

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466
                +   H  I++  + +   ++  I +    V   +  L +     TL RGY  +Q 
Sbjct: 313 DPLKALTARHDEIQRARSAVRRDINRLIAAETERVGHLSARLTTLGPAATLARGYAVVQR 372

Query: 467 -DTNNN---FITQKRNLATKTRILINFFDGQANA 496
                     +    +    TR+ +   DG   A
Sbjct: 373 LSAAGQPTGVLRSVHDAPAGTRLRVRVADGAIAA 406


>gi|111022831|ref|YP_705803.1| exodeoxyribonuclease VII large subunit [Rhodococcus jostii RHA1]
 gi|110822361|gb|ABG97645.1| probable exodeoxyribonuclease VII large subunit [Rhodococcus jostii
           RHA1]
          Length = 418

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 12/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HS 62
           S   S     + V  +S  +   ++  L  V V G+I+       +  A+  L+D     
Sbjct: 10  STGPSTAEQPWPVRTVSAKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDM 68

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +        L        EG   ++ GK++ + G     + +  +   G G LL  +E+
Sbjct: 69  SLSVTCSPQLLQNSPVPLTEGSRVVMFGKLSFYTGRGSVSLRVTEIRAIGIGELLARIER 128

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            +  L  EGLF  + K P+PF+P  I +IT    A   D+L     R+P +R  +    V
Sbjct: 129 LRALLAAEGLFDPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTPV 188

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +I +A      LKE    P  D+IILARGGGS+EDL  F+DE + RAI     
Sbjct: 189 QGATAVPQILDA------LKELDADPHVDVIILARGGGSVEDLLPFSDETLCRAIVACRT 242

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  L+D+ ADLRA TPT AA+  VP     Q+ +  L +R    +   ++
Sbjct: 243 PVVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQ 302

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            + + ++ L     L +  + L      ++RL      ++   I  +     H+  R+ +
Sbjct: 303 RESDLISQLRSRPVLADPLRALDHRSDEVERLWEAGRRDISRAIAAESTTIEHLRARLTT 362

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 363 LGPAATLAR 371



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 9/161 (5%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +  +  +++       ++     + +Q  + ++  +    +    + +  ++  LR + 
Sbjct: 256 LSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQRESDLISQLRSRP 315

Query: 410 -----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                   + +    +++L       +S  I +  T++      L +     TL RGY+ 
Sbjct: 316 VLADPLRALDHRSDEVERLWEAGRRDISRAIAAESTTIEHLRARLTTLGPAATLARGYSV 375

Query: 465 IQ----DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +Q    D +   +    +    T+I +   DG   A V+ K
Sbjct: 376 VQRIVPDGDPEVLRSVDDAPPGTQIRVRVADGAIRAAVMGK 416


>gi|331694829|ref|YP_004331068.1| Exodeoxyribonuclease 7 large subunit [Pseudonocardia dioxanivorans
           CB1190]
 gi|326949518|gb|AEA23215.1| Exodeoxyribonuclease 7 large subunit [Pseudonocardia dioxanivorans
           CB1190]
          Length = 423

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
            S   +     + V  ++  +   V+  L  V V G+++       +G A+ +L+D  + 
Sbjct: 1   MSDAPTSPESPWPVRTVARKIAEWVDR-LGAVWVEGQLAQVTARPGTGTAFLTLRDPAAD 59

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +      G + +      EG   +V GK + F G     + ++ +   G G LL  +E
Sbjct: 60  VSLQLTCPVGLVREGGPAVTEGNRVVVHGKPSFFLGRGTLSLRVDRIQAVGLGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF    K P+PF+P  I +IT    A   D++   + R+P +R  I    
Sbjct: 120 RLRRLLAAEGLFDVARKRPLPFLPGRIGLITGRASAAEHDVVSNATARWPSVRFRIEHTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
            QG     +I  A+  L+        P  D+I+LARGGGS+EDL  F+DE + RA+A++ 
Sbjct: 180 TQGALAVPQIVEALGVLDR------DPDVDVIVLARGGGSVEDLLPFSDETLCRAVADAR 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D+ ADLR  TPT A    VP      + +  L  R    +   +
Sbjct: 234 TPVVSAIGHEPDTPLVDHVADLRCSTPTEAGRRLVPDLAEESARISGLRDRARRALHGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L +L     L +    L      L+RL       L+  +  +     H+  R+ 
Sbjct: 294 DREQRLLVALRARPVLADPLGGLQVRHEELERLRERTHAALDRGLAARATEIEHLRARLT 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 TLGPAATLAR 363



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 15/170 (8%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             ++        ++    + E+   I  +  +  R +      +  +L  LR +      
Sbjct: 253 ADLRCSTPTEAGRRLVPDLAEESARISGLRDRARRALHGWVDREQRLLVALRARPVLADP 312

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-T 468
              +   H  +++L  R    L   + +  T +      L +     TL RGY  +Q   
Sbjct: 313 LGGLQVRHEELERLRERTHAALDRGLAARATEIEHLRARLTTLGPAATLARGYAVVQRVP 372

Query: 469 NNN---------FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509
           +            +     +    R+ I   DG   A V       +   
Sbjct: 373 DGEAADRGVAWPVLRSAGEVGEGDRLRIRVADGAVAARVEPATAAGQDGA 422


>gi|291461166|ref|ZP_06027321.2| exodeoxyribonuclease VII, large subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378434|gb|EFE85952.1| exodeoxyribonuclease VII, large subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 392

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 11/349 (3%)

Query: 37  VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP 96
           + GEIS     + SGH YFS+KD+ S+I    +   + +I    +EG    + G +  + 
Sbjct: 17  IEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAFNYKMKRIPEDLKEGDAIKLFGDVGFYE 75

Query: 97  GSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155
              ++Q+++  +      G L   LEK K+K+ E+G F + HK  +P  PK I V+T+ T
Sbjct: 76  VKGEFQVLVRHIEKQNALGALFAKLEKVKEKMAEKGYFDESHKKELPRFPKNIGVVTALT 135

Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214
           GA ++DI++    RF  + + I+P KVQG    +EI   I  LN ++E       D+II 
Sbjct: 136 GAALQDIIKTTRKRFNSINIYIYPAKVQGAGAEQEIIKGIETLNKIEE------IDLIIA 189

Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274
            RGGGSIEDLW FN+E +  A  NS  PIISA+GHE D+ L+D  AD RA TPT A E++
Sbjct: 190 GRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAVGHEIDFLLSDLTADKRAATPTQAIELS 249

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSLLKALPNSDQTLSCSRYRLDRLP 332
           VP +E L  SL + +  L  ++   ++       +      L N   T++  R  +    
Sbjct: 250 VPERESLVKSLEDKKIYLAKLLKSYLEDMKKELLIRIENYHLKNFPSTINNYRELIVEKE 309

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            +L   ++ ++ +K   F   I+++     I+ +++       K + IE
Sbjct: 310 EDLTKAIKNLLEQKRHIFEVKIDKVSVLNPINTLKRGYSVSQIKNKRIE 358



 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 49/163 (30%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  + +    ++      I+ +        + +E       + +    ++    L 
Sbjct: 224 HEIDFLLSDLTADKRAATPTQAIELSVPERESLVKSLEDKKIYLAKLLKSYLEDMKKELL 283

Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +       +   + I      I +    +   + + ++       +    +      NTL
Sbjct: 284 IRIENYHLKNFPSTINNYRELIVEKEEDLTKAIKNLLEQKRHIFEVKIDKVSVLNPINTL 343

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGY+  Q  N   I    ++     +     +G+  +IV  K
Sbjct: 344 KRGYSVSQIKNKR-IEVLDDIEVNDEMTTILKNGKLISIVKEK 385


>gi|238019307|ref|ZP_04599733.1| hypothetical protein VEIDISOL_01171 [Veillonella dispar ATCC 17748]
 gi|237864006|gb|EEP65296.1| hypothetical protein VEIDISOL_01171 [Veillonella dispar ATCC 17748]
          Length = 407

 Score =  226 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 116/383 (30%), Positives = 180/383 (46%), Gaps = 14/383 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   +       L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGSKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG+    
Sbjct: 122 LGYFDDSHKQSLPYMASCIGIVTSQSGAVLHDILHVSERRNPLVQFKLFSVPVQGNTVGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I   +   +         II+ RGGGS+EDLW FND  +V AI N++ PIISA+G
Sbjct: 182 VIARGIAAADADPDVDV------IIVGRGGGSMEDLWCFNDRSVVEAIYNANTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD R  TP+ AAEMAV     LQ  L   E  L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPITTLQDQLSEKEEYLHEFIRYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRRLGIPALQFLHKQKTHLQELSQSLTNATKERCNTEKHSLALLAQQLESLNPLQMM 355

Query: 367 QKNRQHILEKQQHIEQIVKQHLR 389
            K    +  K + I  + + H +
Sbjct: 356 VKGFAKVEHKDKPITSVTQLHPK 378



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     I   Q  + +  +    +I    ++K   L +L  +         +  
Sbjct: 253 TPSHAAEMAVLPITTLQDQLSEKEEYLHEFIRYTLQQKRTDLTLLFNRRLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             TH+++L   +      +  +   S+++  + L+S      + +G+  ++  +   IT 
Sbjct: 313 QKTHLQELSQSLTNATKERCNTEKHSLALLAQQLESLNPLQMMVKGFAKVEHKD-KPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L  K  I +   DG   A V           K
Sbjct: 372 VTQLHPKDDIRVTLADGYVTATVKEAHKDGRITKK 406


>gi|269955739|ref|YP_003325528.1| exodeoxyribonuclease VII large subunit [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304420|gb|ACZ29970.1| exodeoxyribonuclease VII, large subunit [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 412

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 169/371 (45%), Gaps = 12/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P S   +     +SV+ +S  ++  + + L  V V G++  +     S   Y +L+D   
Sbjct: 9   PASAPLTTPDAPWSVAVVSEKIRGWI-ARLGDVWVEGQVVQFTERPGSWMQYLTLRDVEA 67

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +   I    L       E+G   LV  K   + G+  + ++ + + P G G LL  +
Sbjct: 68  EASLSVKIPSRALATSTARIEKGARVLVHAKPDFWTGNGSFALLADEVRPVGVGELLARI 127

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  ++ L  EGLF +  K  +PF+P ++ ++T        D+++    R+P +R  +  V
Sbjct: 128 EHLRRILAAEGLFDESRKTRLPFLPHVVGLVTGRNSDAKHDVMKNALLRWPQVRFEVREV 187

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    +E+  AI +L+        P  +++++ARGGG++EDL  F+DE +VRA A  
Sbjct: 188 AVQGPSAVREVKAAIAELDAR------PEVEVVVVARGGGALEDLLPFSDESLVRAAAAC 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  ADLRA TPT AA+  VP     +  +      + + +   
Sbjct: 242 RTPLVSAIGHEQDCPLLDLVADLRASTPTDAAKRVVPDVAEERRRVEQARRTMRHALRAR 301

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  + + L+ +     L   +  +      +        H L   + R       +  ++
Sbjct: 302 LDREQHGLDGVRSRPVLARPESMIEHREREIAYRVTHARHVLNAALLRASGEIGRLEAQV 361

Query: 358 KSDFLIHNIQK 368
           ++      +++
Sbjct: 362 RALSPASTLER 372



 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 58/162 (35%), Gaps = 5/162 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA--- 400
             +      ++  +++       ++    + E+++ +EQ  +     +      +     
Sbjct: 251 HEQDCPLLDLVADLRASTPTDAAKRVVPDVAEERRRVEQARRTMRHALRARLDREQHGLD 310

Query: 401 --ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                 +  + ++ I +    I   +T    +L+  +      +      +++ +  +TL
Sbjct: 311 GVRSRPVLARPESMIEHREREIAYRVTHARHVLNAALLRASGEIGRLEAQVRALSPASTL 370

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           +RGY  +Q  + + +    + A  T + +    G+  A V  
Sbjct: 371 ERGYAVVQRPDGHVVRSPDDAAPGTGVRLRLAAGELAATVDG 412


>gi|300869340|ref|ZP_07113930.1| Exodeoxyribonuclease 7 large subunit [Oscillatoria sp. PCC 6506]
 gi|300332639|emb|CBN59128.1| Exodeoxyribonuclease 7 large subunit [Oscillatoria sp. PCC 6506]
          Length = 391

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 176/340 (51%), Gaps = 16/340 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSL- 57
           M        +     SV+ ++ +++ ++E +  L  V V GE+S       SG  +F+L 
Sbjct: 1   MTSLIPDRLIPDTALSVAGVTSYIQALLEDDSYLRLVWVTGEVSSVSEY-RSG-LFFTLC 58

Query: 58  -KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
            +DN   I  + W     K+  LP +G + +V+G I  +    +YQ+ +   +P+G G  
Sbjct: 59  DRDNPVVIRCVTWNSQREKLVQLPVKGEQLIVLGSIRVYKARGEYQLNVWQALPAGEGLQ 118

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
               ++ + +L  EGLF    K  +P  P+ +AV+TSPT A   DI + ++ R+P LRV+
Sbjct: 119 ALRYQQLRSRLDAEGLFDPTRKRSLPIHPQTVAVVTSPTAAAWGDIQRTLTQRYPGLRVL 178

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           + P  VQG+  P  IA AI ++          R D+IILARGGG++EDL  FNDE +VRA
Sbjct: 179 LSPALVQGELAPASIATAIERV------ELDGRADVIILARGGGAVEDLACFNDERVVRA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IAN SIP I+ IGHE D +LAD  AD  A TPT AAE  VP   +L          L   
Sbjct: 233 IANCSIPTIAGIGHERDESLADLVADKTAHTPTAAAEKVVPDIANLYIQHRQRVRTLIEA 292

Query: 296 IIRL---IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
           + +     + +   L   LK LP++ ++L  +  +   L 
Sbjct: 293 VEQRLYKSEAQCQGLKHRLKRLPSTSRSLQQATVQCQMLR 332



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 2/111 (1%)

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAY 454
           +    +  L E  + R++      + L  R++     S  ++       +    L +   
Sbjct: 281 QHRQRVRTLIEAVEQRLYKSEAQCQGLKHRLKRLPSTSRSLQQATVQCQMLREKLAALDP 340

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           +  L+RGY  ++  + +       LA    + I    G     ++  +   
Sbjct: 341 QAVLQRGYAIVKQNDGSLTRSTEGLAPGEELTIKLNRGMLKVKIVEISKST 391


>gi|332706276|ref|ZP_08426344.1| exodeoxyribonuclease VII large subunit [Lyngbya majuscula 3L]
 gi|332354981|gb|EGJ34453.1| exodeoxyribonuclease VII large subunit [Lyngbya majuscula 3L]
          Length = 411

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 15/375 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M   +  +       SV+ L+ +++ ++E    L  V V GE+S           +F+L+
Sbjct: 1   MASSTINSLFSEAIVSVAGLTDYIQELLEEDDQLHRVWVIGEVSSSNHHPKG--MFFTLQ 58

Query: 59  DNHSR--IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           D  ++  I  + W+  L+K+  LP  G + +++G +  +P   +YQ+ +   +P+G G  
Sbjct: 59  DGDAKATIRCVAWRSQLSKLVQLPVIGEQLIILGSLRVYPQRGQYQLNVWQALPAGEGLQ 118

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175
                + +++   EGLF  Q K P+P  P+ IAV+TSP  A   DI + +  R+P LRV+
Sbjct: 119 ALRSRQLRQRFEAEGLFDPQRKRPLPIHPETIAVVTSPQAAAWGDIKRTLQQRYPGLRVL 178

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
             P +VQG+     I NAI ++          R  ++ILARGGG+ EDL  FNDE +VRA
Sbjct: 179 FSPAQVQGELAIASIVNAIDRVER------DGRAKLLILARGGGASEDLACFNDERVVRA 232

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA  SIP+I+ IGH+ D +LAD  AD  A TPT AAE AVP    L +     +  L   
Sbjct: 233 IAQCSIPVITGIGHQRDESLADLVADYSAHTPTAAAEQAVPELITLYAEHQQRQTSLYQA 292

Query: 296 IIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           + ++ +   + L+ L   L +   DQ L   +  +    + L       + +  +H   +
Sbjct: 293 VTQITQASRHQLHHLRTRLRHLALDQQLHQEQNAMAFQHQRLLQVTSKRLSQGIQHCQLL 352

Query: 354 INRIKSDFLIHNIQK 368
             ++ +      +Q+
Sbjct: 353 KEKLNTLDPQKVLQR 367



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 53/163 (32%), Gaps = 5/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            ++      ++    +       ++    ++      +Q      + +    +     LH
Sbjct: 246 HQRDESLADLVADYSAHTPTAAAEQAVPELITLYAEHQQRQTSLYQAVTQITQASRHQLH 305

Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            LR + +      ++      +     R+  + S ++        +    L +   +  L
Sbjct: 306 HLRTRLRHLALDQQLHQEQNAMAFQHQRLLQVTSKRLSQGIQHCQLLKEKLNTLDPQKVL 365

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +RGY  ++ ++    +   +LA    + I   +GQ    +I  
Sbjct: 366 QRGYALVRTSDGTIASSTGHLAPGEELQIQLGEGQVKVKIIEI 408


>gi|328884767|emb|CCA58006.1| Exodeoxyribonuclease VII large subunit [Streptomyces venezuelae
           ATCC 10712]
          Length = 405

 Score =  226 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65
            +       V E+S  +   ++  L  + V G+I+       +G  + +L+D      I 
Sbjct: 4   TTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSYDISIG 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+ K+
Sbjct: 63  VTCYRQVFDAVADVVSEGARVVVRAKPEWYAPRGQLSLRAVEIKPVGIGELLARLEQLKR 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K P+PF+P  I ++     A  RD+L+    R+P +   +  V VQG 
Sbjct: 123 SLASEGLFALDRKKPLPFLPHRIGLVCGRASAAERDVLENARRRWPAVAFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   ++  A+       E       D+II+ARGGGS+EDL  F+DE +VRA+A+   P++
Sbjct: 183 KAVPQVVQAVK------ELDAHEEVDVIIVARGGGSVEDLLPFSDEQLVRAVADCRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  + 
Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELDRVRGLRDRALRTVRGLLDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +      L  L       L  ++ R     +H   R+++   
Sbjct: 297 RGLAHALARPVMEHPQRMVEVREDELVALLARSRRVLGHLLDRADSELSHTRARVRALSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATMER 362



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 42/119 (35%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
               +          E+    A+   + E  +  +      +  L+ R   +L H +   
Sbjct: 281 RDRALRTVRGLLDREERGLAHALARPVMEHPQRMVEVREDELVALLARSRRVLGHLLDRA 340

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
            + +S T   +++ +   T++RGY  +Q  + + +     +A    +     +G+    
Sbjct: 341 DSELSHTRARVRALSPAATMERGYAVLQRADGSVVRSPGEVAEGEDLRARVAEGEFAVR 399


>gi|41408784|ref|NP_961620.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81831691|sp|Q73WH4|EX7L_MYCPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|41397142|gb|AAS05003.1| XseA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 415

 Score =  226 bits (575), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + + +     + V  ++  +   ++  L  V V G+++       S   +  L+D  + 
Sbjct: 5   ATSEPNSAENPFPVRAVAIRVAGWIDR-LGTVWVEGQLAQVSLRPDSKTVFMVLRDPAAD 63

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +       +  +        EG + +V GK + + G   + + +  +   G G LL  +E
Sbjct: 64  MSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K PIPF+P +I +IT    A  RD+    + R+P +R  +    
Sbjct: 124 RLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVRNTA 183

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + RAIA   
Sbjct: 184 VQGPNAVAQIVEA------LRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACR 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P+ISA+GHE D  L D  AD+RA TPT AA+  VP     Q  + +L  R    +   +
Sbjct: 238 TPVISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWV 297

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     L    + L+     + R    + H++  +   +     H+  R+ 
Sbjct: 298 SREQRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRHDVTRLTAAETERIGHLRARLA 357

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 358 TLGPAATLAR 367



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +  +    +      + +  + 
Sbjct: 277 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 333

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483
           I   ++    +    +      L +     TL RGY  +Q       + +    +    T
Sbjct: 334 IRHDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRSVGDAPAGT 393

Query: 484 RILINFFDGQANA 496
           R+ +   DG   A
Sbjct: 394 RLRVRVADGAVAA 406


>gi|254390230|ref|ZP_05005449.1| exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus
           ATCC 27064]
 gi|294814787|ref|ZP_06773430.1| Exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus
           ATCC 27064]
 gi|326443166|ref|ZP_08217900.1| exodeoxyribonuclease VII large subunit [Streptomyces clavuligerus
           ATCC 27064]
 gi|197703936|gb|EDY49748.1| exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327386|gb|EFG09029.1| Exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus
           ATCC 27064]
          Length = 402

 Score =  226 bits (575), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66
           +       V E+S  +   ++  L  + V G+I+        G  + +L+D      +  
Sbjct: 5   TSPDAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGQGVVFLTLRDPSHDISVSV 63

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
             ++   + +  +  EG   +V  K   +    +  +    L P G G LL  LE+ K+ 
Sbjct: 64  TCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAELRPVGVGELLARLEQLKRS 123

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF  + K  +PF+P  + ++     A  RD+L+    R+P +R  +  V VQG  
Sbjct: 124 LAAEGLFGPERKKRLPFLPHRVGLVCGRASAAERDVLENARRRWPAVRFEVRNVAVQGVH 183

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              ++  A+ +L+ L      P  D+II+ARGGGS+EDL  F+DE +VRA+A    P++S
Sbjct: 184 AVPQVVGAVQELDAL------PEVDVIIVARGGGSVEDLLPFSDEQLVRAVAGCRTPVVS 237

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    +  L+  +  
Sbjct: 238 AIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVRQLRGRALRTVRSLLDREER 297

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L   L    L    + +      ++ L       L  ++ R      H   R+ +    
Sbjct: 298 GLAHALARPVLERPHRMVEEREAEVEALAARGRRVLGHLLDRAESELAHTRARVVALSPA 357

Query: 364 HNIQK 368
             +++
Sbjct: 358 ATLER 362



 Score = 84.8 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 55/153 (35%), Gaps = 5/153 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK-----IAILHMLRE 407
           ++  +++       +K    + E+ + + Q+  + LR +      +      A+   + E
Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVRQLRGRALRTVRSLLDREERGLAHALARPVLE 309

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           +    +      ++ L  R   +L H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 310 RPHRMVEEREAEVEALAARGRRVLGHLLDRAESELAHTRARVVALSPAATLERGYAVLQR 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            +   +     +A    +      G     V  
Sbjct: 370 PDGAVVRDPDEVAAGEELRARVARGTFPVRVAE 402


>gi|68536536|ref|YP_251241.1| exodeoxyribonuclease VII large subunit [Corynebacterium jeikeium
           K411]
 gi|123775684|sp|Q4JU84|EX7L_CORJK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|68264135|emb|CAI37623.1| exodeoxyribonuclease large subunit [Corynebacterium jeikeium K411]
          Length = 436

 Score =  226 bits (575), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 19/358 (5%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65
            +     ++V +L+  +K+ ++  L  + V G+++      +   +Y +L+D +  + + 
Sbjct: 4   PNSPEAPWAVGQLNDQVKNWIQR-LGFIWVEGQVTQVNMKSTWRFSYITLRDVNLEASVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +    L  +    ++G   +V GK + +     + + +  +   G G LL  +E+ KK
Sbjct: 63  LTVETSALKNLATPVKDGDRIVVHGKPSFYSKRGSFSLWVTEIRQVGIGQLLAQIEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            +  EGLF  + K P+PF+P  + +IT    A  RD+++    R+P +R  +    VQG 
Sbjct: 123 AMFAEGLFDPRLKTPLPFLPTTVGLITGRGSAAERDVMEVAKRRWPAVRFRVINTAVQGP 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   ++ +A      L+E       D+II+ARGGGS+EDL  F++E +VR ++    P++
Sbjct: 183 KTVPQVVDA------LQELERDSAVDVIIVARGGGSVEDLLPFSEETLVREVSRLRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY AD+RA TPT AA+  VP        +     R    +   + ++ 
Sbjct: 237 SAIGHEPDNPLLDYVADVRAATPTDAAKTVVPDVVQELRIISEARQRGAGALRNWVAHER 296

Query: 305 NT---------LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
                      +      +      ++ +  R DR       +L   I       N +
Sbjct: 297 KGLAQIRTRPVMADPSLPVARQQDIIAEALQRKDRALGVHVRSLRSSIESLKAQVNAL 354



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            Q     LR     +++ +A +            +      I + + R +  L   ++S 
Sbjct: 281 RQRGAGALRNWVAHERKGLAQIRTRPVMADPSLPVARQQDIIAEALQRKDRALGVHVRSL 340

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQ 493
            +S+      + +     TL RGY+ +    +D +    +T    +   +++ I   DG 
Sbjct: 341 RSSIESLKAQVNALGPSQTLARGYSIVQVIPRDKSGAQVVTTVDQVTPGSQLRIRVPDGS 400

Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKRE 520
             A  +           K     +  +
Sbjct: 401 ITAAAMGVQAAPGGVMNKNSNTTDSTD 427


>gi|260577673|ref|ZP_05845609.1| exodeoxyribonuclease, large subunit [Corynebacterium jeikeium ATCC
           43734]
 gi|258604219|gb|EEW17460.1| exodeoxyribonuclease, large subunit [Corynebacterium jeikeium ATCC
           43734]
          Length = 439

 Score =  226 bits (575), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65
            +     ++V +L+  +K+ ++  L  + V G+++      +   +Y +L+D +  + + 
Sbjct: 4   PNSPEAPWAVGQLNDQVKNWIQR-LGFIWVEGQVTQVNMKSTWRFSYITLRDVNLEASVS 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +    L  +    ++G   +V GK + +     + + +  +   G G LL  +E+ KK
Sbjct: 63  LTVETSALKNLATPVKDGDRIVVHGKPSFYSKRGSFSLWVTEIRQVGIGQLLAQIEQLKK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184
            +  EGLF  + K  +PF+P  + +IT    A  RD+++    R+  +R  +    VQG 
Sbjct: 123 AMFAEGLFDPRLKATLPFLPTTVGLITGRGSAAERDVMEVAKRRWLAVRFRVINTAVQGP 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
           +   ++ +A      L E    P  D+II+ARGGGS+EDL  F++E +VR ++    P++
Sbjct: 183 KTVPQVVDA------LHELEQDPAVDVIIVARGGGSVEDLLPFSEEALVREVSRLRTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY AD+RA TPT AA+  VP        +     R    +   + ++ 
Sbjct: 237 SAIGHEPDNPLLDYVADVRAATPTDAAKTVVPDVVQELRIISEARQRGAGALRNWVSHER 296

Query: 305 NTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L  +      +D +L  +R +  +    +  +  L + +         +  ++ +   
Sbjct: 297 KGLAQIRTRPVMADPSLPVTRQKDIIAEALQRKDRALGVHVRSLRSSIESLKAQVNALGP 356

Query: 363 IHNIQK 368
              + +
Sbjct: 357 SQTLAR 362



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 47/146 (32%), Gaps = 7/146 (4%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            Q     LR     +++ +A +            +      I + + R +  L   ++S 
Sbjct: 281 RQRGAGALRNWVSHERKGLAQIRTRPVMADPSLPVTRQKDIIAEALQRKDRALGVHVRSL 340

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQ 493
            +S+      + +     TL RGY+ +    +D +    +T    +   +++ I   DG 
Sbjct: 341 RSSIESLKAQVNALGPSQTLARGYSIVQVIPRDKSGAQVVTTVDQVDPGSQLRIRVPDGS 400

Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKR 519
             A  +           +     +  
Sbjct: 401 ITAAAMGVQAAPGGVMNRNSNTTDST 426


>gi|298376911|ref|ZP_06986865.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_19]
 gi|301311103|ref|ZP_07217032.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 20_3]
 gi|298265895|gb|EFI07554.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_19]
 gi|300831166|gb|EFK61807.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 20_3]
          Length = 444

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 97/519 (18%), Positives = 191/519 (36%), Gaps = 96/519 (18%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59
           M P     S +    S+ EL+  ++  +         VR E+S  R   SSGH Y    +
Sbjct: 1   MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60

Query: 60  NH-------SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104
            +       +++   IW  T   ++  F  E G       + LV   +          + 
Sbjct: 61  KNVQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119

Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163
           +  + P+   G ++    +  ++L EEG+F+   + P P +P+ IA+ITSPT A   D +
Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179

Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220
            +++     +P    +FP  +QG+     +  A+ ++   ++       D++++ RGGG+
Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234

Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280
             DL  F+  ++    A   +PII+ IGHE D T+ D  A  R  TPT  AE  +     
Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
                                            + +  + L   R  +  L  ++    +
Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +         ++       +   I++NR  +      +  +                +
Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPAM---------------AS 355

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            L   R+            ++    R+   ++ K+      + +T + ++  +    LKR
Sbjct: 356 GLLSRRQSV----------LENTELRLRNGITSKLSESGRFIQLTEQFIKMASPDYILKR 405

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           GY+     +   I    +L     +   F DG+  +I+ 
Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443


>gi|308178026|ref|YP_003917432.1| exodeoxyribonuclease VII large subunit [Arthrobacter arilaitensis
           Re117]
 gi|307745489|emb|CBT76461.1| exodeoxyribonuclease VII large subunit [Arthrobacter arilaitensis
           Re117]
          Length = 420

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + +  LS  LK  +E++   V V G++        +GHAY +L+D  +
Sbjct: 10  PATAGQTTADNPWPLRLLSEKLKIHIENS-PVVWVEGQL--LEANVRNGHAYLTLRDVDA 66

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
                  IW  T+ K++  P+ G   +   K + +  + +  +    L P G G LL  L
Sbjct: 67  DFSFSVTIWASTMRKLDSTPQVGSRVVAQVKPSFYAKTGRLSLNASDLRPVGLGELLVRL 126

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLFS +HK P+P +P  I +IT       +D+L+  + R+P ++  +   
Sbjct: 127 ERLRQALGAEGLFSPEHKRPLPVLPHRIGLITGRDSDAEKDVLRNATLRWPSVQFKVINT 186

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +   ++  A+ +L+        P  D+I++ARGGG++EDL  F++E +VRA+  +
Sbjct: 187 AVQGMDAANQVIAALQKLDA------DPEIDVIVIARGGGALEDLLPFSNEDLVRAVFAA 240

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           S P++SAIGHE D  + D  ADLRA TPT AA+  VP      + L     RL+  I  L
Sbjct: 241 STPVVSAIGHEADRPILDDVADLRASTPTDAAKRIVPDLNEEFAGLEMARNRLDRSINNL 300

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++ +   L S+ +   L N    ++     L+R  +     L   + R     +H+ N++
Sbjct: 301 LQREAQLLASVRERPVLSNPQVMVTSRAEDLERWKQRSTDLLRHRVMRASDEISHLKNQM 360

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 361 RALSPQQTLDR 371



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 61/157 (38%), Gaps = 5/157 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E+   +E    +  R I    + +  +L  +RE+      
Sbjct: 261 ADLRASTPTDAAKRIVPDLNEEFAGLEMARNRLDRSINNLLQREAQLLASVRERPVLSNP 320

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           +  +      +++   R   +L H++      +S     +++ + + TL RGY+  Q  +
Sbjct: 321 QVMVTSRAEDLERWKQRSTDLLRHRVMRASDEISHLKNQMRALSPQQTLDRGYSVTQLED 380

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            + + +      K+++ I    GQ  A  +   P  +
Sbjct: 381 GSIVREAAQAPAKSKLFIRVASGQLVAQTLESIPAGQ 417


>gi|254774112|ref|ZP_05215628.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 415

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + + +     + V  ++  +   ++  L  V V G+++       S   +  L+D  + 
Sbjct: 5   ATSEPNSAENPFPVRAVAIRVASWIDR-LGTVWVEGQLAQVSLRPDSKTVFMVLRDPAAD 63

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +       +  +        EG + +V GK + + G   + + +  +   G G LL  +E
Sbjct: 64  MSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIE 123

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K PIPF+P +I +IT    A  RD+    + R+P +R  +    
Sbjct: 124 RLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVRNTA 183

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + RAIA   
Sbjct: 184 VQGPNAVAQIVEA------LRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACR 237

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P+ISA+GHE D  L D  AD+RA TPT AA+  VP     Q  + +L  R    +   +
Sbjct: 238 TPVISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWV 297

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     L    + L+     + R    +  ++  +   +     H+  R+ 
Sbjct: 298 SREQRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRRDVTRLTAAETERIGHLRARLA 357

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 358 TLGPAATLAR 367



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +  +    +      + +  + 
Sbjct: 277 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 333

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483
           I   ++    +    +      L +     TL RGY  +Q       + +    +    T
Sbjct: 334 IRRDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRTVGDAPAGT 393

Query: 484 RILINFFDGQANA 496
           R+ +   DG   A
Sbjct: 394 RLRVRVADGAVAA 406


>gi|139437242|ref|ZP_01771402.1| Hypothetical protein COLAER_00381 [Collinsella aerofaciens ATCC
           25986]
 gi|133776889|gb|EBA40709.1| Hypothetical protein COLAER_00381 [Collinsella aerofaciens ATCC
           25986]
          Length = 389

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 89/420 (21%), Positives = 155/420 (36%), Gaps = 32/420 (7%)

Query: 84  IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143
           ++    G    +  + +   +  S   +G G L   + +  +KL  EGL  +  K  IP 
Sbjct: 1   MQVSFKGSFNLYKATGRMSFVARSFSLAGEGLLRQQVAQLAEKLRREGLMDEARKRRIPV 60

Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202
               +AV+TS +GAVI D+ + +  R P + ++    KVQG+  P E+   + +   +  
Sbjct: 61  FCSRVAVVTSLSGAVIDDVKRTLRRRNPLVELVCVGAKVQGEGAPAELIEGLHRAAAIT- 119

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
               P PD I+L RGGGS EDL  FNDE + RA+A   +P+++ IGHE D ++ D  +D 
Sbjct: 120 ----PAPDCILLVRGGGSFEDLMTFNDEELARAVAACPVPVVTGIGHEPDTSICDMVSDR 175

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
           RA TPT AAE   P    L   L     RL   +  +                     + 
Sbjct: 176 RASTPTAAAESVAPAMTELADVLETRHQRLGAAMASM---------------------IG 214

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
             +  L+ L +      +    R     +    R   +     +++    +      +  
Sbjct: 215 SDQVDLEMLDQRGRRAWDTYTARLGDALDAAACRPCLNDPTFMVERRESELALTADRLSG 274

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
            +           +     L      + + +      +    +R+E      +    + +
Sbjct: 275 AIT----RSVGAFRSNFERLPERLVASTSGLDGKRHALTLASSRLEHQGRTMLSKPASDL 330

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
                 L + +    L RGY+     +    T  +       I +   DG   A V    
Sbjct: 331 GRAAASLDALSPLKVLARGYSIAYSDDG-VATSAKTFKPGDAIRVRMADGNVAATVDTVE 389


>gi|303228812|ref|ZP_07315626.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516524|gb|EFL58452.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 407

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 177/380 (46%), Gaps = 14/380 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             S+++L+  +K  ++    L +V V G I+  +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLSITQLNNLIKRTIDREYLLKNVYVSGTITNAK-RHSSGHVYFSLKDEESSIDVTMWSS 61

Query: 72  TLNK--IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   +   +  +    +  +I   +       L    +  +++L  
Sbjct: 62  TVQSKGLANAFQNGLLVTIKASVNFYNKMGRLNLIASDMQVGSKSPLQLEFDALQRELSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
            G F D HK PIP +   I ++TS TGAV+ DIL     R PL +  +F V VQG     
Sbjct: 122 LGYFDDAHKQPIPVLSSCIGIVTSSTGAVLHDILHISEHRNPLMQFKLFSVPVQGTTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND +++ AI N+S PIISA+G
Sbjct: 182 IIAKGIEA------ADKDPDVDVIIVGRGGGSMEDLWCFNDRVVIEAIYNASTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-L 307
           HETD+TLADYAAD+R  TP+ AAE+AV     LQ  L      L  ++ + ++ K     
Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQHLQQKLDYLQYVMDQTLQQKRIELS 295

Query: 308 NSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L      L     +L+         +    + I   +     IH +
Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355

Query: 367 QKNRQHILEKQQHIEQIVKQ 386
            K    I ++   I  I   
Sbjct: 356 VKGYSKIEKEGHTISSIQNM 375



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 59/167 (35%), Gaps = 6/167 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                        ++     H  +     +   QQH++Q +      +    ++K   L 
Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQHLQQKLDYLQYVMDQTLQQKRIELS 295

Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +  +         +   ++ ++    +++ + S + +     +S+ T+ L      + +
Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +GY+ I+    + I+  +N+A      I   DG   A+V    P  
Sbjct: 356 VKGYSKIE-KEGHTISSIQNMAKGDVFKITLRDGSIKAVVEEVLPDG 401


>gi|300781584|ref|ZP_07091438.1| exodeoxyribonuclease VII large subunit [Corynebacterium genitalium
           ATCC 33030]
 gi|300533291|gb|EFK54352.1| exodeoxyribonuclease VII large subunit [Corynebacterium genitalium
           ATCC 33030]
          Length = 418

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 178/373 (47%), Gaps = 12/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M       S     +SVS+++  +K  +E  L  + + G+++      S   +Y +L+D 
Sbjct: 3   MAGAQPPKSTPERPWSVSQVNDSVKQWIER-LGWLWIEGQLTQINVKPSWRFSYLTLRDT 61

Query: 61  HSRIDAIIWKGT--LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
              +   +   T  +  ++    +G   +V+GK   + G   + + +  +   G G LL 
Sbjct: 62  QKEMSIQLTADTKMVRSLDAPLNDGDRVIVLGKPAFYAGRGSFSLWVTEIRHVGEGELLA 121

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ +K L  EGLF    K P+PF+P+ I +IT    A  RD+L     R+P +   + 
Sbjct: 122 KIEQLRKTLAAEGLFDPARKKPLPFLPRRIGLITGRGSAAERDVLSVAKDRWPAVDFRVI 181

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     ++  A+  L            D+II+ARGGGS+EDL  F++E + RA+A
Sbjct: 182 NTPVQGAGTVPQVVEALRTL------DDDETVDVIIIARGGGSVEDLLPFSEEALQRAVA 235

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            +S P++SAIGHE D  + D  ADLRA TPT AA+  VP     +  L +  +RL++ + 
Sbjct: 236 EASTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVVAERQMLDDARSRLSSALR 295

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             ++ + + L+ +     + N    ++  R  LDR    +  ++  ++ ++      +  
Sbjct: 296 SWVRRERHGLSQVRSRPAMANPLTQVTLRREELDRATAAIRRDITRLLKQETAEVKALRA 355

Query: 356 RIKSDFLIHNIQK 368
           ++ +      + +
Sbjct: 356 QVSALGPAATLAR 368



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 7/142 (4%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ + + +  +   ++  +R       +  +   M       ++      + +    I 
Sbjct: 279 ERQMLDDARSRLSSALRSWVRRERHGLSQVRSRPAM--ANPLTQVTLRREELDRATAAIR 336

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT--NN---NFITQKRNLATKT 483
             ++  +K     V      + +     TL RGY  +Q    +      +T        +
Sbjct: 337 RDITRLLKQETAEVKALRAQVSALGPAATLARGYAVVQVQPRDGSEPEVVTSIAQAPPGS 396

Query: 484 RILINFFDGQANAIVINKAPPK 505
           ++ I   DG   A  +   P +
Sbjct: 397 QLRIRVGDGSITAASMAATPAE 418


>gi|218437275|ref|YP_002375604.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7424]
 gi|218170003|gb|ACK68736.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7424]
          Length = 384

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 105/393 (26%), Positives = 179/393 (45%), Gaps = 32/393 (8%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64
           +      SVS L+ +++ ++E +  L  V V GE+S           +F+L D    + +
Sbjct: 4   TFSETALSVSGLTTYIQDLLEGDEQLQQVWVTGEVSSLNDHPRG--LFFTLSDPQVEAAV 61

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           + ++W     ++   P+ G + LV+G I  +     Y++ +  ++  G G      ++ +
Sbjct: 62  NCVVWNSQRLRLVEEPKVGAQILVLGSIRLYAKRGDYRLTVFQVLAVGEGLQALRYQQLR 121

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            +L  EGLF  + K  +P  P+ IAV+TSPT A   DI + +S R+P L ++  P  VQG
Sbjct: 122 SRLQAEGLFDHERKRLLPLHPQTIAVVTSPTAAAWGDIQRTLSQRYPGLHLLFSPATVQG 181

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +E P  I  A+ ++N         R +++ILARGGGS+EDL  FNDE +VRAIA S IP+
Sbjct: 182 EEAPPSIVRAMERVNR------DGRAEVMILARGGGSVEDLSCFNDERVVRAIALSQIPV 235

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGH+ D +LAD  AD+   TPT AAE  VP           L       + R+I   
Sbjct: 236 ITGIGHQRDESLADLVADVSVHTPTAAAERVVPD-------YNQLVIDHQQRVNRIIDSV 288

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
              L      L      L+                    + +       +  ++ +    
Sbjct: 289 RERLQQESNYLDQLHSRLTQL------------PTTSRYLAQMTAKCQLLKQKLIALDPQ 336

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             +++    + ++ + I +   + +    L  +
Sbjct: 337 EVLKRGYAVVRKRDEKIIRTTDELVPEQELTIQ 369



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 2/106 (1%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYK 455
               ++ + +  + R+     ++ +L +R+  +   S  +        +  + L +   +
Sbjct: 277 HQQRVNRIIDSVRERLQQESNYLDQLHSRLTQLPTTSRYLAQMTAKCQLLKQKLIALDPQ 336

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
             LKRGY  ++  +   I     L  +  + I    G     V + 
Sbjct: 337 EVLKRGYAVVRKRDEKIIRTTDELVPEQELTIQLGQGFFKVKVTDI 382


>gi|307152784|ref|YP_003888168.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7822]
 gi|306983012|gb|ADN14893.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7822]
          Length = 384

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 109/333 (32%), Positives = 174/333 (52%), Gaps = 16/333 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64
           +      SVS L+ +++ ++E +  L  V V GE+S           +F+L D    + I
Sbjct: 4   TFSETALSVSGLTTYIQDLLEGDEQLQQVWVTGEVSSLHDHPKG--LFFTLSDPQVDAAI 61

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
             ++W     ++   P+ G + LV+G I  +    +Y++ +  ++  G G      ++ +
Sbjct: 62  SCVVWNSQRLRLVTEPKAGEQLLVLGSIRIYAKRGEYRLTVFQVLAVGEGLQALRYQQLR 121

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            +L  EGLF  Q K P+P  P+ IAV+TSPT A   DI + +S R+P L +++ P  VQG
Sbjct: 122 SRLQAEGLFDAQRKRPLPLHPQTIAVVTSPTAAAWGDIQRTLSQRYPGLHLLLSPATVQG 181

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +E P  I  A+ ++N         R  +IILARGGGS+EDL  FNDE +VRAIA S IP+
Sbjct: 182 EEAPMSIVAAMERVNR------DGRAQVIILARGGGSVEDLSCFNDERVVRAIALSQIPV 235

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGH+ D +LAD  AD+   TPT AAE  VP    L         R+   +   ++ +
Sbjct: 236 ITGIGHQRDESLADLVADVSVHTPTAAAERVVPDYHQLVLEHRERVNRVVEAVKERLQGE 295

Query: 304 I---NTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           +     L + L  LP++ ++L+    +   L +
Sbjct: 296 LTYVEQLRTRLTLLPSTSRSLAQVTAKCQLLQQ 328



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSC 438
           E++V  + + +   ++     ++ + E  K R+    T++++L TR+      S  +   
Sbjct: 264 ERVVPDYHQLVLEHRER----VNRVVEAVKERLQGELTYVEQLRTRLTLLPSTSRSLAQV 319

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
                +  + L +   +  LKRGY  ++ T+   +     L  +  + I    G     V
Sbjct: 320 TAKCQLLQQKLIALDPQAVLKRGYAVVRKTDAQIVRSTDELHPEQELTIQLGQGFFKVKV 379

Query: 499 INK 501
            + 
Sbjct: 380 TDI 382


>gi|254410940|ref|ZP_05024718.1| exodeoxyribonuclease VII, large subunit [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182295|gb|EDX77281.1| exodeoxyribonuclease VII, large subunit [Microcoleus chthonoplastes
           PCC 7420]
          Length = 420

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 120/387 (31%), Positives = 203/387 (52%), Gaps = 16/387 (4%)

Query: 4   FSQKNSL-DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
            +  NSL      SV+ L+ +++ ++E +  L  V V GE+S     H SG  +F+L+D 
Sbjct: 13  MTNTNSLLPEATLSVAGLTDYIQELLEQDTQLQKVWVIGEVSSAN-RHRSG-MFFTLRDL 70

Query: 60  -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
              + I  ++W   L+K+  LP+ G + + +G I  +P   +YQ+++   +P G G    
Sbjct: 71  EGKASIQCVVWNSVLSKLVQLPQSGEQLIALGSIRIYPQRGQYQLMVWQALPGGEGLQAL 130

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
              + +++L  EGLF  Q+K P+P  P+ IAV+TSP  A   DI + +  R+P L V+  
Sbjct: 131 RYNQLRQRLAAEGLFDAQNKRPLPTHPQTIAVVTSPQAAAWGDIRRTLRQRYPGLSVLFS 190

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P +VQGD  P+ I  AI ++          R +++IL+RGGG+ EDL  F+DE +VRAIA
Sbjct: 191 PAQVQGDLAPESIVTAIERVER------DGRAELVILSRGGGASEDLVGFDDERVVRAIA 244

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           N SIP+++ IGH+ D +LAD  AD  A TPT AAE AVP    L +     +  L+  + 
Sbjct: 245 NCSIPVLTGIGHQRDESLADLVADFCAHTPTAAAERAVPELATLITEHQQRQEALHEAVT 304

Query: 298 RLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           + +    N L+ L   L     ++ L    + + +  + L H+    I +  +H   +  
Sbjct: 305 QHLDTSRNQLHQLKNRLQRLPLNRQLQQEHHAIAQQRQRLIHSTSWRISQATQHCQFLGQ 364

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQ 382
           ++ +    + +++    +  +Q  I +
Sbjct: 365 KLATLDPTNVLKRGYAVVRTEQGKIAR 391



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 5/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHIL----EKQQHIEQIVKQHLRYIFLEKKEKI 399
            ++      ++    +       ++    +     E QQ  E + +   +++   + +  
Sbjct: 256 HQRDESLADLVADFCAHTPTAAAERAVPELATLITEHQQRQEALHEAVTQHLDTSRNQLH 315

Query: 400 AILHMLREQTKNR-IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            + + L+    NR +   H  I +   R+    S +I           + L +    N L
Sbjct: 316 QLKNRLQRLPLNRQLQQEHHAIAQQRQRLIHSTSWRISQATQHCQFLGQKLATLDPTNVL 375

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           KRGY  ++           +L     + I   +GQ N  V   
Sbjct: 376 KRGYAVVRTEQGKIARNATSLVPGEELQIQLAEGQINVQVTEI 418


>gi|189461896|ref|ZP_03010681.1| hypothetical protein BACCOP_02562 [Bacteroides coprocola DSM 17136]
 gi|189431290|gb|EDV00275.1| hypothetical protein BACCOP_02562 [Bacteroides coprocola DSM 17136]
          Length = 432

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/510 (20%), Positives = 201/510 (39%), Gaps = 98/510 (19%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++H   S+ EL+  ++  + + L     V+ E+S  R  + SGH Y  F  KD       
Sbjct: 1   MEHSSLSLQELNSLVRKSIRTCLPDTYWVQAELSDVRANY-SGHCYLEFVQKDAKSNALI 59

Query: 62  SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   IIW     +++  F  E G       + LV   +        Y + +  + P+  
Sbjct: 60  AKARGIIWSNVYYQLKAYFERETGQAFVSGIKVLVKVSVDFHELYG-YSLTVTDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G +    ++  K+L EEG+ +   +  +P + + IAVI+S T A   D   ++      
Sbjct: 119 LGDMALRRKEILKRLDEEGVLTLNKELELPELTQRIAVISSATAAGYGDFCNQLENNAFG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG+     I +A+ ++N       C R D++++ RGGG+  DL  F+ 
Sbjct: 179 FAFHSRLFPAVMQGEAVESSIISALERINA-----ECDRWDVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +    A   +P+I+ IGHE D T+ D  +  R  TPT AAE  +              
Sbjct: 234 YELATHCAQFPLPVITGIGHERDDTVLDMVSHTRVKTPTAAAEFLI-------------- 279

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                                          L  +  RL+R  + +   L ++  RK   
Sbjct: 280 -----------------------------NHLRQTAERLERYTQFIYQELPVLFTRKKEQ 310

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
           F H ++RI        +Q   QH   +Q+ + + ++   +  FL+++ ++          
Sbjct: 311 FEHWVSRIPV-----RVQMRLQHEHFRQERLTKQIQMGWQTRFLKEEHRLQ--------- 356

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                        +  RI   L   ++     +++  + +++ + +  LK+GY+     N
Sbjct: 357 -------------IDRRIATALEVILQREKHRLALIEQQVKASSPELLLKKGYSITL-KN 402

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499
              +T    L     ++     G+  + VI
Sbjct: 403 GRAVTDATQLLPGDEVVTKVAKGEFKSKVI 432


>gi|213965463|ref|ZP_03393658.1| exodeoxyribonuclease VII, large subunit [Corynebacterium amycolatum
           SK46]
 gi|213951847|gb|EEB63234.1| exodeoxyribonuclease VII, large subunit [Corynebacterium amycolatum
           SK46]
          Length = 411

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 14/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
            S+  +       V  L+  +K  +E  L  + V GEI+      S   +Y +L+D  + 
Sbjct: 1   MSKLETSAEKPVQVRRLNQLVKDYIER-LGQIWVEGEIAQVNSKPSWKLSYITLRDTSAE 59

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +       T          G   +V+GK   + G  ++ +      P G G LL  LE
Sbjct: 60  FSVSVTC--STAALRNNPLRNGDRVVVLGKPAFYAGRGQFSLWATEWRPVGLGQLLARLE 117

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K P+P++P  I +IT    A  RD+L     R+P +   +    
Sbjct: 118 QLRQALAAEGLFDPRLKRPLPYLPNKIGLITGRGSAAERDVLSVAGARWPEVDFRVINTI 177

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +   EI  A+ QL+        P  D+II+ARGGGS+EDL  F+DE ++RA++ ++
Sbjct: 178 VQGAKAVPEIIEALAQLDA------DPEVDVIIVARGGGSVEDLLPFSDEALIRAVSKAT 231

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L DY ADLRA TPT AA+  VP     +  +  L  R +  + R +
Sbjct: 232 TPMVSAIGHEPDTPLLDYVADLRAATPTDAAKKTVPDAAEERRLIAQLRERSSASLRRWV 291

Query: 301 KYK--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +       +    L +    +      +      L   +   + R+    + +  ++ 
Sbjct: 292 DREVATLRDLTSRPVLRDPLTPIRVREEFVTAQVDRLRFLIHRSLEREEAVVSGLRGKVS 351

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 352 ALGPSATLAR 361



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----RE 407
            +  +++       +K      E+++ I Q+ ++    +      ++A L  L       
Sbjct: 249 YVADLRAATPTDAAKKTVPDAAEERRLIAQLRERSSASLRRWVDREVATLRDLTSRPVLR 308

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                I      +   + R+ F++   ++     VS     + +     TL RGY  +Q 
Sbjct: 309 DPLTPIRVREEFVTAQVDRLRFLIHRSLEREEAVVSGLRGKVSALGPSATLARGYAIVQA 368

Query: 468 T-----NNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
                     +T   +    +++ I   DG  +A  +   P 
Sbjct: 369 QSATQPEPQIVTSIADAPMGSQLRIRVSDGSISAATLATKPA 410


>gi|303232060|ref|ZP_07318763.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513166|gb|EFL55205.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 407

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 177/380 (46%), Gaps = 14/380 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             S+++L+  +K  ++    L +V V G I+  +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLSITQLNNLIKRTIDREYLLKNVYVSGTITNAK-RHSSGHVYFSLKDEESSIDVTMWSS 61

Query: 72  TLNK--IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   +   +  +    +  +I   +       L    +  +++L  
Sbjct: 62  TVQSKGLANAFQNGLLVTIKASVNFYNKMGRLNLIASDMQVGSKSPLQLEFDALQRELSA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188
            G F D HK PIP +   I ++TS TGAV+ DIL     R PL +  +F V VQG     
Sbjct: 122 LGYFDDAHKQPIPVLSSCIGIVTSSTGAVLHDILHISEHRNPLMQFKLFSVPVQGTTAGP 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I            P  D+II+ RGGGS+EDLW FND +++ AI N+S PIISA+G
Sbjct: 182 IIAKGIEA------ADKDPDVDVIIVGRGGGSMEDLWCFNDRVVIEAIYNASTPIISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-L 307
           HETD+TLADYAAD+R  TP+ AAE+AV     LQ  L      L  ++ + ++ K     
Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQDLQQKLDYLQYVMDQTLQQKRIELS 295

Query: 308 NSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L      L     +L+         +    + I   +     IH +
Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355

Query: 367 QKNRQHILEKQQHIEQIVKQ 386
            K    I ++   I  I   
Sbjct: 356 VKGYSKIEKEGHTISSIQNM 375



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 6/163 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                        ++     H  +     +   QQ ++Q +      +    ++K   L 
Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQDLQQKLDYLQYVMDQTLQQKRIELS 295

Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +  +         +   ++ ++    +++ + S + +     +S+ T+ L      + +
Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
            +GY+ I+    + I+  +N+A      I   DG   A+V   
Sbjct: 356 VKGYSKIE-KEGHTISSIQNMAKGDVFKITLRDGSIKAVVEEV 397


>gi|186683190|ref|YP_001866386.1| exodeoxyribonuclease VII large subunit [Nostoc punctiforme PCC
           73102]
 gi|186465642|gb|ACC81443.1| exodeoxyribonuclease VII, large subunit [Nostoc punctiforme PCC
           73102]
          Length = 426

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 114/362 (31%), Positives = 190/362 (52%), Gaps = 17/362 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SVS L+ +++ ++E +  L  V V GE+S     H SG  +F+L+D    + I  ++W 
Sbjct: 29  LSVSGLTDYIRLLLEQDEQLRQVWVTGEVSSANH-HRSG-LFFTLQDTDRTAGIKCVVWN 86

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             L K+  +P  G + +++G I  +P   +YQ+ +   +P+G G      ++ K +LL E
Sbjct: 87  SQLPKLAQMPVAGEQIIILGSIRLYPQRGEYQLSVWQTLPAGVGLQALRYQQLKNRLLAE 146

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  Q K  +P  P+ IAV+TSPT A   DI + +  R+P L V+  P  VQG++ P+ 
Sbjct: 147 GLFDAQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKQRYPGLHVLFSPATVQGEQAPES 206

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++          R +++IL+RGGG++E+L  FNDE +VR++A+ SIP+I+ IGH
Sbjct: 207 IVKAIERVER------DGRAEVLILSRGGGAVEELACFNDERVVRSLASCSIPVITGIGH 260

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +LAD  AD+   TPT AAEM VP    L +        L+  +    +   N L  
Sbjct: 261 QRDESLADLVADVCVHTPTAAAEMVVPSLSELYTEHRQRVVALHEAVHDSGENAENKLQV 320

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY---RHFNHIINRIKSDFLIHNI 366
           L   L             +++L  + +H ++I + R     +H   +  ++ +      +
Sbjct: 321 LRNRLRRLRLDRQVQ-QEVEKLAWKRQHLVQITMGRSQQAAQHLELLRQKLATLDPKAVL 379

Query: 367 QK 368
           Q+
Sbjct: 380 QR 381



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 55/172 (31%), Gaps = 6/172 (3%)

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           +  + + +L  ++     H       +    L     ++RQ ++   +        H   
Sbjct: 258 IGHQRDESLADLVADVCVHTPTAAAEMVVPSLSELYTEHRQRVVALHE------AVHDSG 311

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
              E K ++    + R +   ++      +      +  I   + +     + +  + L 
Sbjct: 312 ENAENKLQVLRNRLRRLRLDRQVQQEVEKLAWKRQHLVQITMGRSQQAAQHLELLRQKLA 371

Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +   K  L+RGY  ++  +         LA    +LI    G+    VI   
Sbjct: 372 TLDPKAVLQRGYAVVRREDGAIARSAAELAVGEDLLIQLGQGRVKVKVIEVN 423


>gi|313894511|ref|ZP_07828075.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313440907|gb|EFR59335.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 407

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 14/362 (3%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
             ++++L+  +K  ++    L +V V G I   +  HSSGH YFSLKD  S ID  +W  
Sbjct: 3   VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61

Query: 72  TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           T+    +    + G+   V   +  +    +  +I   +       L    +  K++L  
Sbjct: 62  TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGSKSPLQLEFDALKRELTA 121

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
            G F D HK  +P++   I ++TS +GAV+ DIL     R P ++  +F V VQG+    
Sbjct: 122 LGYFDDGHKQSLPYMASCIGIVTSQSGAVLHDILHVSERRNPLVQFKLFSVPVQGNTAGL 181

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IA  I   +   +        +II+ RGGGS+EDLW FND  +V AI  ++ P+ISA+G
Sbjct: 182 IIAKGIAAADADPDVD------LIIVGRGGGSMEDLWCFNDRAVVEAIYTANTPVISAVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HETD+TL DY AD R  TP+ AAEMAV     LQ  L   E  L+  I   ++ K   L 
Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPLTTLQDQLTEKEEYLHEYIRYTLQQKRTDLT 295

Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
               + L     Q L   +  L  L + L +  +     +      +  +++S   +  +
Sbjct: 296 LLFNRRLGIPALQFLHKQKSHLQELTQTLTNITKERCNTEKHSLALLAQQLESLNPLQMM 355

Query: 367 QK 368
            K
Sbjct: 356 VK 357



 Score = 90.6 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 6/155 (3%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415
              H  +     +   Q  + +  +    YI    ++K   L +L  +         +  
Sbjct: 253 TPSHAAEMAVLPLTTLQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRRLGIPALQFLHK 312

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
             +H+++L   +  I   +  +   S+++  + L+S      + +G+  ++  NN  IT 
Sbjct: 313 QKSHLQELTQTLTNITKERCNTEKHSLALLAQQLESLNPLQMMVKGFAKVEH-NNEPITS 371

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
              L     I +   DG   A V           K
Sbjct: 372 VSQLQANDDIRVTLADGYVTATVKEAHKDGRITKK 406


>gi|315443128|ref|YP_004076007.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. Spyr1]
 gi|315261431|gb|ADT98172.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. Spyr1]
          Length = 415

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 19/378 (5%)

Query: 1   MNP-----FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF 55
           M P        +++ +   + V  ++  +   ++  L  V V G+I+      +S  A+ 
Sbjct: 1   MTPEGADGAPGQSADN--PFPVRGVAIRVAGWIDR-LGAVWVEGQIAQLTLRPNSNTAFI 57

Query: 56  SLKDNHS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +L+D  +   +     +G +        +G + +V GK + + G   + + +  +   G 
Sbjct: 58  TLRDPAADMSLSLTCPRGLVVNAPVKMSDGTQVIVYGKPSFYTGRGTFSLRVSEIRAVGI 117

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-L 172
           G LL  +E+ ++ L  EGLF  + K PIPF+P  I +IT    A   DI+   S R+P +
Sbjct: 118 GELLARIERLRRLLDAEGLFDPRLKRPIPFLPDTIGLITGRASAAEHDIMAVASGRWPAV 177

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
           R  +    VQG     +I +A+  L+           D+I+LARGGGS+EDL  F+DE +
Sbjct: 178 RFAVRHTVVQGPNAVPQIVDALRALDA------DRDVDVIVLARGGGSVEDLLPFSDETL 231

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            R IA  + P++SAIGHE D  L D  ADLRA TPT AA+  VP     Q+ +  L  R 
Sbjct: 232 CREIARCTTPVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALITELRRRS 291

Query: 293 NNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
              +   +  + + ++ L     +      +      + R    +  ++  ++  +    
Sbjct: 292 ARALRNWVNREAHVVSQLRSRPVMSRPLAAIDARTDEIGRARTAVRRDIARLLRVESDRV 351

Query: 351 NHIINRIKSDFLIHNIQK 368
            H+  R+ +      + +
Sbjct: 352 GHLSARLTTLGPAATLAR 369



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       ++       +Q  I ++ ++  R +      +  ++  LR +    
Sbjct: 257 LVADLRAATPTDAAKRIVPDTAAEQALITELRRRSARALRNWVNREAHVVSQLRSRPVMS 316

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                I      I +  T +   ++  ++     V   +  L +     TL RGY  +Q 
Sbjct: 317 RPLAAIDARTDEIGRARTAVRRDIARLLRVESDRVGHLSARLTTLGPAATLARGYAVVQT 376

Query: 468 ----TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
                +   +    +    TR+ +   DG   A      
Sbjct: 377 VPDAGDPRILGSVADAPAGTRLRVRVADGAITATSEGGQ 415


>gi|229006510|ref|ZP_04164155.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock1-4]
 gi|228754744|gb|EEM04144.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock1-4]
          Length = 353

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 180/398 (45%), Gaps = 56/398 (14%)

Query: 108 LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167
           + P G G L  A E+ K +L EEGLFS  +K PIP   K I VITSPTGA IRDI+  I 
Sbjct: 1   MQPDGIGNLHLAYEQLKVRLEEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIIATIK 60

Query: 168 CRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226
            R+P+  VI+FPV VQG+     I  AI   N +K+       D +I+ RGGGSIE+LW 
Sbjct: 61  RRYPIGNVIVFPVLVQGESAAPSIVQAIQTANEMKD------IDALIVGRGGGSIEELWA 114

Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           FN+EM+ RAI  S IPIISA+GHETD+T+AD+ ADLRAPTPT AAE+A P    LQ  ++
Sbjct: 115 FNEEMVARAIFASEIPIISAVGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVL 174

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
               RL   +  ++  K   L +L K+       Q       +LDR   +L    E  + 
Sbjct: 175 QRTLRLQRTMREMLHKKQEQLQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVE 234

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           +K      +   ++       I + +  +   Q+ +++ ++                   
Sbjct: 235 KKVNQLKQLSFYLEKHHPSQKIVQTKTRVETLQKQLQREMQ------------------- 275

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                                         +++   +     + L++ +    + RGY  
Sbjct: 276 ----------------------------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGL 307

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +       +   +++     + +   DG  +  V    
Sbjct: 308 VYSEKKQVLKSVKDVDLGDVVSVQLQDGVLDCNVSGIE 345


>gi|288920876|ref|ZP_06415172.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EUN1f]
 gi|288347708|gb|EFC81989.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EUN1f]
          Length = 452

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            S       V  +S  +   + S L  V V G+++        G  + +L+D+ +   + 
Sbjct: 4   TSTPDEPLPVRTISRAMGDWI-SRLGRVWVEGQVTEISRRPGMGTVFMTLRDSAADVSLR 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +     +     +G   +V GK +   G     + +  + P G+G LL  LE+ K 
Sbjct: 63  VTCPRAVCEAVGPGLVDGARVVVWGKPSFHAGRGTLALAVTEIRPLGAGALLARLERLKA 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K   PF+P ++ +IT    A  RD+++    R+P +R+ +  V VQG 
Sbjct: 123 TLAAEGLFAASRKKRPPFLPGVVGLITGRASAAERDVVENARRRWPAVRIELREVAVQGP 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               +I +A      L E       ++I++ARGGGS+EDL  F+DE ++RA+  +  P++
Sbjct: 183 LAVGQIIDA------LAELDADGAVEVIVIARGGGSLEDLLPFSDEALLRAVVAARTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+RA TPT AA+  VP      + +  L  R   ++   +  + 
Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVAEQSAGVEALRGRARRVLTHRLDLEA 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L  L     L    + +      ++ L       +   +    R   H   R+++   
Sbjct: 297 RRLADLRGRPVLAAPLREIEHREQAVETLRSRSRRCVLHAVEVAGRDLAHAAARMRALSP 356

Query: 363 IHNIQK 368
              + +
Sbjct: 357 AATLDR 362



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 36/116 (31%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
                     R     ++        +       I +    ++ L +R    + H ++  
Sbjct: 281 RGRARRVLTHRLDLEARRLADLRGRPVLAAPLREIEHREQAVETLRSRSRRCVLHAVEVA 340

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
              ++     +++ +   TL RGY  +Q  +   +     +    R+++    G  
Sbjct: 341 GRDLAHAAARMRALSPAATLDRGYALVQRADGLVVRSPAEVTRGERLVVRVAGGTF 396


>gi|117929082|ref|YP_873633.1| exodeoxyribonuclease VII large subunit [Acidothermus cellulolyticus
           11B]
 gi|158512369|sp|A0LW37|EX7L_ACIC1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|117649545|gb|ABK53647.1| Exodeoxyribonuclease VII large subunit [Acidothermus cellulolyticus
           11B]
          Length = 416

 Score =  223 bits (568), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 110/384 (28%), Positives = 183/384 (47%), Gaps = 13/384 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +  +S + P   V E++  +   V   L  + V G+++  +    +   +F+L+D  + 
Sbjct: 1   MALTSSAESPV-PVREVARQIGLWV-GRLGRIWVDGQLTQIKIRPGTNTVFFNLRDPSAN 58

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +   A   +     IE  P EG+   V+GK   +      Q+++  + P G G LL  LE
Sbjct: 59  VTLLATCPRQVFECIEPKPTEGLRVAVLGKPEFYVPRGSLQLVVHDIRPIGIGDLLARLE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + KK L  EGLF+ + K P+PF+P+++ +I     A  RD+++    R+P +R  I  V 
Sbjct: 119 RLKKILAAEGLFAPERKRPLPFLPRVVGLICGRGSAAERDVVENARRRWPAVRFDIAAVA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A+ +L+                ARGGGS+EDL  F+DE ++RA+A   
Sbjct: 179 VQGPYAVPEIVAALRRLDDDPVVDVIVI------ARGGGSVEDLLPFSDETLLRAVAACR 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHETD  L D+ AD+ A TPT AA   VP      + L  L  RL N +   I
Sbjct: 233 TPVVSAIGHETDTPLLDFVADVAASTPTDAARRIVPDVAEQYAQLAQLGDRLRNALRHRI 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L++L     L +  Q ++     + RL R     L+  I        H++ R++
Sbjct: 293 DREQQVLDTLRSRPVLAHPVQDINRRGEEILRLVRAGRTALDTAIRAADADARHLVARLR 352

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQ 382
           +      +++    +L+    + +
Sbjct: 353 ALAPAATLERGYAIVLDPAGRVIR 376



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 44/140 (31%), Gaps = 2/140 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +    + +    +   +    R    ++         +       I      I +L+ 
Sbjct: 270 VAEQYAQLAQLGDRLRNAL--RHRIDREQQVLDTLRSRPVLAHPVQDINRRGEEILRLVR 327

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                L   I++           L++ A   TL+RGY  + D     I     + T   +
Sbjct: 328 AGRTALDTAIRAADADARHLVARLRALAPAATLERGYAIVLDPAGRVIRGADEVQTGDEL 387

Query: 486 LINFFDGQANAIVINKAPPK 505
           ++    G+    V + AP +
Sbjct: 388 VVRLGRGRLRVTVTDVAPAE 407


>gi|91215731|ref|ZP_01252701.1| exodeoxyribonuclease VII large subunit [Psychroflexus torquis ATCC
           700755]
 gi|91186197|gb|EAS72570.1| exodeoxyribonuclease VII large subunit [Psychroflexus torquis ATCC
           700755]
          Length = 466

 Score =  223 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 102/514 (19%), Positives = 195/514 (37%), Gaps = 72/514 (14%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH---- 61
            NS     +++ ++   L+ ++ ++      ++ EI+       SGH Y  L +      
Sbjct: 2   SNSTATSVFTLLDIGKSLQRMISTHYHKPYWIKTEIAKLNAYTKSGHCYPDLVEKQNGQV 61

Query: 62  -SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPSG 112
            +++ AIIW  T   I    E+        G+  +++ K+T +  +  + + I  +  S 
Sbjct: 62  LAQMRAIIWSDTFKTISKQFEDVTRKPLSEGMTVMILAKVT-YHPNYGFSLNIVDIDASF 120

Query: 113 -SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +     +  K+L  EGLF        P +PK IA+I+  T    +D L  IS    
Sbjct: 121 TLGEMAKEKLESLKRLKTEGLFDLNKTLTFPKVPKRIAIISVETSKGYQDFLNIISHNKY 180

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
            F   + +FP  +QGD+    I+ A+  + T          D++ + RGGG    L  ++
Sbjct: 181 GFKFELELFPALLQGDKAITSISEALELIKTRTSE-----FDVVTIIRGGGGDVGLSCYD 235

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
             ++   +A   +P+IS IGH T+ TL +        TPT  A   +         L  L
Sbjct: 236 SFILASKVARFPLPVISGIGHSTNETLVEMVTYTNKITPTDVAYFFIDRFMDCFEELNML 295

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            +  N ++                        L   ++ L  L  + +  ++ ++ R   
Sbjct: 296 HSDFNRLVKYK---------------------LKEEQFELKALHLKFKSQVDTLLQRHDF 334

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                  RIKS    + ++     + +    ++ + KQ  +    + +            
Sbjct: 335 MLKQQRQRIKSTLPSY-VRSRFDGLTQLSFQLKFMTKQGFQTENQQLRR----------- 382

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
                         L   ++   S  + + H +++  +  L+  + +  LKRGYT     
Sbjct: 383 --------------LSNTLKRETSDVLVNNHNTLNYLSSNLKLLSPEQILKRGYTLNL-V 427

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           N+  I    +L T  ++   F DG A + VI   
Sbjct: 428 NDKIIKSASDLKTGDQLKTMFADGYAESKVIKTK 461


>gi|134097535|ref|YP_001103196.1| putative exodeoxyribonuclease VII large subunit [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291009729|ref|ZP_06567702.1| exodeoxyribonuclease VII, large subunit [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133910158|emb|CAM00271.1| putative exodeoxyribonuclease VII large subunit [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 391

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 12/352 (3%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI--IWKGTLNKIEFL 79
             +   + + L  + V G+I+       +  A+ +L+D  + +          L  +E  
Sbjct: 3   RKIADWI-NRLGSIWVEGQITQISARPGAATAFLTLRDPSADVSLTLTCSSALLRNMEPP 61

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
             +G   +V GK T F G     + ++ +   G G LL  +E+ ++ L  EGLF    K 
Sbjct: 62  LTDGSRVVVHGKPTFFVGRGTLSLRVDEIRAVGIGELLARIERLRQLLKAEGLFDPARKR 121

Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLN 198
           P+PF+P  + +IT    A   D+L     R+P +R  I  V VQG     +I  A     
Sbjct: 122 PLPFLPNKVGLITGRASAAEHDVLTNARLRWPAVRFEIRNVAVQGSTAVPQILEA----- 176

Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADY 258
            L E    P  D+I+LARGGGS+EDL  F+DE + RA++    P++SAIGHE D  L D+
Sbjct: 177 -LGELDRVPEVDVIVLARGGGSVEDLLPFSDEALCRAVSACRTPVVSAIGHEPDSPLLDH 235

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPN 316
            AD+R  TPTGA +  VP        +  L  R    +   +  +   L++L     L +
Sbjct: 236 VADVRCSTPTGAGKRVVPDVAEETQRIHQLRDRARRALHGWVDRERRLLDALRSRPVLAD 295

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               L     ++  L       +  ++  +      + +R+ +      + +
Sbjct: 296 PIGPLDRRSEQVSGLRDRARRAMTSVLTTEQHRVEGVRSRLTTLGPAATLAR 347



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 9/155 (5%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-- 412
             ++        ++    + E+ Q I Q+  +  R +      +  +L  LR +      
Sbjct: 237 ADVRCSTPTGAGKRVVPDVAEETQRIHQLRDRARRALHGWVDRERRLLDALRSRPVLADP 296

Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              +      +  L  R    ++  + +    V      L +     TL RGY  +Q  D
Sbjct: 297 IGPLDRRSEQVSGLRDRARRAMTSVLTTEQHRVEGVRSRLTTLGPAATLARGYAIVQLVD 356

Query: 468 TNN--NFITQKRNLATKTRILINFFDGQANAIVIN 500
            +     +         TR+ +   DG   A+V  
Sbjct: 357 PDGVDGVLRSVDEAGPGTRLRVRVVDGAVYAVVDE 391


>gi|120405585|ref|YP_955414.1| exodeoxyribonuclease VII large subunit [Mycobacterium vanbaalenii
           PYR-1]
 gi|119958403|gb|ABM15408.1| Exodeoxyribonuclease VII large subunit [Mycobacterium vanbaalenii
           PYR-1]
          Length = 410

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 14/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M      +  +   + V  ++  +   ++  L  V V G+I+      +S  A+ +L+D 
Sbjct: 1   MTSAQGHSPEN--PFPVRGVAIRVAGWIDK-LGAVWVEGQIAQLTLRPNSSTAFITLRDP 57

Query: 61  HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            +   +     +  +        +G + +V GK   + G   + + +  +   G G LL 
Sbjct: 58  AADMSLSLTCPRDLVVNAPVKMTDGTQVIVYGKPNFYTGRGTFSLRVSEIRAVGIGELLA 117

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ ++ L  EGLF  + K PIPF+P  I +IT    A   DI+   + R+P +R  + 
Sbjct: 118 RIERLRRLLDTEGLFDPRLKRPIPFLPGTIGLITGRASAAEHDIVAVATGRWPAVRFAVR 177

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG     +I +A      L++    P  D+I+LARGGGS+EDL  F+DE + R IA
Sbjct: 178 NTVVQGPNAVPQIVDA------LRDLDADPDVDVIVLARGGGSVEDLLPFSDETLCREIA 231

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
             + P++SAIGHE D  L D  ADLRA TPT AA+  VP     Q+ + +L  R    + 
Sbjct: 232 ACTTPVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALVTDLRRRSARALR 291

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  + +T+  L     L      +      + R       +++ ++  +     H+  
Sbjct: 292 NWVNREAHTVAQLRSRPVLARPLAAIDARAEEIHRARAAARRDVKRLLATEADRVGHLTA 351

Query: 356 RIKSDFLIHNIQK 368
           R+ +      + +
Sbjct: 352 RLTTLGPAATLAR 364



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 4/101 (3%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +  +    I      I +        +   + +    V   T  L +     TL R
Sbjct: 305 RSRPVLARPLAAIDARAEEIHRARAAARRDVKRLLATEADRVGHLTARLTTLGPAATLAR 364

Query: 461 GYTSIQD--TNN--NFITQKRNLATKTRILINFFDGQANAI 497
           GY  +Q   T+   + +    +     R+ I   DG   AI
Sbjct: 365 GYAVVQTIATSGEPHVLHSVSDAPAGARLRIRVTDGAVTAI 405


>gi|226307723|ref|YP_002767683.1| exodeoxyribonuclease VII large subunit [Rhodococcus erythropolis
           PR4]
 gi|229493931|ref|ZP_04387703.1| exodeoxyribonuclease VII, large subunit [Rhodococcus erythropolis
           SK121]
 gi|226186840|dbj|BAH34944.1| putative exodeoxyribonuclease VII large subunit [Rhodococcus
           erythropolis PR4]
 gi|229319208|gb|EEN85057.1| exodeoxyribonuclease VII, large subunit [Rhodococcus erythropolis
           SK121]
          Length = 421

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 12/362 (3%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIW 69
              + V  +S  +   ++  L  + V G+I+       +  A+  L+D  +   +     
Sbjct: 20  EQPWPVRTVSAKVAGWIDR-LGSIWVEGQITQINARPGTRTAFLVLRDPSADMSLSITCS 78

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
              L+       EG   ++ GK++ + G     + +  +   G G LL  +E+ +  L  
Sbjct: 79  PQLLHNSPVPLTEGSRVVMFGKLSFYTGRGTVSLRVTEIRAVGIGELLARIERLRALLAA 138

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF  + K P+PF+P  I +IT    A  +D++     R+P + + +    VQG     
Sbjct: 139 EGLFDPRLKRPLPFLPGTIGLITGRASAAEKDVVSVAHRRWPAVAIAVRNTAVQGPTAVP 198

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           +I  A      LKE    P  D+IILARGGGS+EDL  F+DE + RAI   + PI+SAIG
Sbjct: 199 QIIEA------LKELDANPVVDVIILARGGGSVEDLLPFSDEALCRAIVACTTPIVSAIG 252

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D  L+D+ ADLRA TPT AA+  VP      + + +L  R    +   +K + + + 
Sbjct: 253 HEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEAALVADLRDRSAAALRSWVKRESHLIE 312

Query: 309 SLLKALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
            L      +   L+  R    ++RL      ++  +I  + R   H+  R+ +      +
Sbjct: 313 QLRTRPVMASPLLAVDRRAEEVERLQAAGRRDVTRLIDSESRTIEHLRARLTTLGPAATL 372

Query: 367 QK 368
            +
Sbjct: 373 AR 374



 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 7/127 (5%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           +    +     R   L ++ +      +       +      +++L       ++  I S
Sbjct: 295 RSAAALRSWVKRESHLIEQLRT---RPVMASPLLAVDRRAEEVERLQAAGRRDVTRLIDS 351

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQ----DTNNNFITQKRNLATKTRILINFFDGQ 493
              ++      L +     TL RGY  +Q    D +   +    +    T+I +   DG 
Sbjct: 352 ESRTIEHLRARLTTLGPAATLARGYAVVQRVVADGDPEVLRSVEDAPPGTQIRVRLADGA 411

Query: 494 ANAIVIN 500
             A V+ 
Sbjct: 412 VRAAVMG 418


>gi|312880057|ref|ZP_07739857.1| Exodeoxyribonuclease VII large subunit [Aminomonas paucivorans DSM
           12260]
 gi|310783348|gb|EFQ23746.1| Exodeoxyribonuclease VII large subunit [Aminomonas paucivorans DSM
           12260]
          Length = 407

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 104/356 (29%), Positives = 168/356 (47%), Gaps = 11/356 (3%)

Query: 17  VSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
           V EL+  ++  +       + V+GEI G +    SGH YF+L   ++R+   +++    +
Sbjct: 11  VDELTERIREQLSTPEFGQLFVKGEIQGLKHHP-SGHVYFTLLGKNARVACALFRSQAER 69

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           +   P+EG E  V G++  +P    YQ++   + P G G    A E  ++KL +EGLF  
Sbjct: 70  VLLWPKEGDETAVQGRLDVYPPRGSYQLLASRIWPLGVGEQARAKELLREKLNQEGLFDP 129

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAI 194
           + K P P  P  + VITS +GA   D+ +  + RF P R++  P +VQG E    +  A 
Sbjct: 130 RLKRPFPQYPLRVGVITSRSGAAFHDVRRVAALRFPPARLLWIPSQVQGVEAADSLVRAF 189

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            +L      +     D ++L RGGGS +DL  F+DE +VRAI     P+   +GHE D T
Sbjct: 190 RRL------QGEEELDCVLLVRGGGSRDDLNPFDDEGVVRAIRQCPFPVAVGVGHEVDRT 243

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L+D AADL APTP+GAAE  +P +E     +   +  L   + R ++     L     AL
Sbjct: 244 LSDLAADLSAPTPSGAAERVLPDREECLRRIRREQESLRGPVARKVRSLGERLRLCSFAL 303

Query: 315 PNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                 + L      L R    L       +  +       +  + +   +  +++
Sbjct: 304 ERPLRRRFLDPRVGDLSRNLSRLREAARACLRVQQDRLRSEMAALDALSPLAPLRR 359



 Score = 83.3 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 62/170 (36%), Gaps = 5/170 (2%)

Query: 344 FRKYRHFNHIINRIKSDFL---IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
               R  + +   + +         +  +R+  L + +  ++ ++  +        E++ 
Sbjct: 238 HEVDRTLSDLAADLSAPTPSGAAERVLPDREECLRRIRREQESLRGPVARKVRSLGERLR 297

Query: 401 ILHMLREQTKNR--IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +     E+   R  +      + + ++R+       ++     +      L + +    L
Sbjct: 298 LCSFALERPLRRRFLDPRVGDLSRNLSRLREAARACLRVQQDRLRSEMAALDALSPLAPL 357

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           +RGY  +   +   I++  +   +T + + + DG+A   V+     +E P
Sbjct: 358 RRGYALVSSPSGRRISRIASWEGETELRVRWLDGEARVRVLQVEREEEGP 407


>gi|294787515|ref|ZP_06752768.1| exodeoxyribonuclease VII, large subunit [Parascardovia denticolens
           F0305]
 gi|315226905|ref|ZP_07868693.1| exodeoxyribonuclease VII large subunit [Parascardovia denticolens
           DSM 10105]
 gi|294484871|gb|EFG32506.1| exodeoxyribonuclease VII, large subunit [Parascardovia denticolens
           F0305]
 gi|315121037|gb|EFT84169.1| exodeoxyribonuclease VII large subunit [Parascardovia denticolens
           DSM 10105]
          Length = 430

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 16/424 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P   +++     +SV+ LS      VE N     V G+I       + G  Y +L+DN 
Sbjct: 15  EPALSRDTTPDNPWSVAHLSQKWHQAVE-NWPATWVEGQIQEINTRRA-GSVYMTLRDNT 72

Query: 62  SRIDAII--WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             +   +  W+    +     + G + +V G+   +   +   +I + +   G G L   
Sbjct: 73  EEVTVQVSGWRNFAYQAAQFVQ-GDKVVVHGRPEIWMKRTSLSLIGDDIRRVGKGDLRQQ 131

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ +KKL  EGLF + +K P+P  P+ I +I +P      D++     R+P +   I  
Sbjct: 132 IEELRKKLKGEGLFDEANKVPLPEFPRRIGLICAPQARAEGDVVTNAKLRWPTIEFTIEH 191

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG+ CP+E+  AI +L+        P  D+II+ARGGG+ EDL  F+DE +VRA A 
Sbjct: 192 VHVQGEHCPEEVIAAIRKLDA------DPTIDVIIVARGGGAFEDLIGFSDEGVVRAAAA 245

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              P++SAIGHE DWTL D AAD+RA TPT AA+  VP      + +   + R+   +  
Sbjct: 246 CVTPLVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQLALVAEAQRRIRERLTY 305

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   +++      L      +   +  +D   R L+  +  +          +   
Sbjct: 306 RLASEQQRIDAYKNRPSLTRPGSIVERPQLLVDDAVRRLDVAVRRLTDDASFRIEKLHAS 365

Query: 357 IKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           + +      + +    + + Q H+  +  +    + + L      A   + + +      
Sbjct: 366 LTALSPQATLNRGYAVVQDDQGHVVSDAALLTVGQKLILTLHRGKASTTVDQTRPAPTEA 425

Query: 415 YLHT 418
               
Sbjct: 426 KKRQ 429



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 2/146 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +    + E Q+ I + +    R    +++           +  + +      +   + 
Sbjct: 285 VMEQLALVAEAQRRIRERLT--YRLASEQQRIDAYKNRPSLTRPGSIVERPQLLVDDAVR 342

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R++  +          +      L + + + TL RGY  +QD   + ++    L    ++
Sbjct: 343 RLDVAVRRLTDDASFRIEKLHASLTALSPQATLNRGYAVVQDDQGHVVSDAALLTVGQKL 402

Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511
           ++    G+A+  V    P   +  K+
Sbjct: 403 ILTLHRGKASTTVDQTRPAPTEAKKR 428


>gi|254819704|ref|ZP_05224705.1| exodeoxyribonuclease VII large subunit [Mycobacterium
           intracellulare ATCC 13950]
          Length = 415

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 12/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62
           + + +     + V  ++  +   ++  L  V V G+++       S   +  L+D  +  
Sbjct: 6   TSEPNSAENPFPVRAVAIRVAGWIDK-LGTVWVEGQLAQVSMRPDSKTVFMVLRDPAADM 64

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +     +  +        EG + +V GK + + G   + + +  +   G G LL  +++
Sbjct: 65  SLSVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIDR 124

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            ++ L  EGLF  + K PIPF+P +I +IT    A  RD+    + R+P +R  +    V
Sbjct: 125 LRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVRTVAAARWPAVRFAVRNTAV 184

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +I +A      L+E       D+I+LARGGGS+EDL  F+DE + RAIA    
Sbjct: 185 QGPSAVAQIVDA------LRELDRDADVDVIVLARGGGSVEDLLPFSDETLCRAIAACRT 238

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+ISA+GHE D  L D  ADLRA TPT AA+  VP     Q  + +L  R    +   + 
Sbjct: 239 PVISAVGHEPDNPLCDLVADLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVS 298

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L  +     L      L      + R    +  ++  +   +     H+  R+ +
Sbjct: 299 REQRDLAQIRSRPVLAEPLTALKARAEEIHRARSAIRRDITRLAATETERIGHLSARLAT 358

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 359 LGPAATLAR 367



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 53/161 (32%), Gaps = 8/161 (4%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K       +Q+ I+ + ++  + +      +   L  +R +    
Sbjct: 255 LVADLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSREQRDLAQIRSRPVLA 314

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      I +  + I   ++    +    +   +  L +     TL RGY  +Q 
Sbjct: 315 EPLTALKARAEEIHRARSAIRRDITRLAATETERIGHLSARLATLGPAATLARGYAVVQS 374

Query: 468 ---TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
                +  +    +    TR+ +   DG   A+    A   
Sbjct: 375 VGPAESRVLRSVDDAPAGTRLRVRVADGAVAAVSEGPADGP 415


>gi|306820222|ref|ZP_07453864.1| exodeoxyribonuclease VII large subunit [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551719|gb|EFM39668.1| exodeoxyribonuclease VII large subunit [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 413

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 125/496 (25%), Positives = 212/496 (42%), Gaps = 87/496 (17%)

Query: 10  LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +VS+++  L   +      S V V GE+   +   + G+ + SLKD+ S+I A+
Sbjct: 1   MKLKVLTVSQVNDSLSSYIYANPIFSSVRVVGEVFNLK-KTAYGYTFLSLKDDMSKISAM 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
            +       +F  + G    V GKI  +     Y ++I S   SG G      +   +KL
Sbjct: 60  TY-----LEDFDVKVGDTITVQGKINLYKKGGTYSLLINSYEKSGRGQEYENFKILYEKL 114

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
            + G F  + K  IP  P+ I VITS +GA ++DI+  I  R+P+ ++ I+  K+QG+  
Sbjct: 115 EKAGYFKSKIKKAIPKFPQSIGVITSASGAAVQDIMAVIKRRYPVVKLYIYDSKMQGEYV 174

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            + + N I +L  +         D II++RGGG  +DL  FN E I +A+   SIPIISA
Sbjct: 175 EQSVINGIRRLEEV-------NVDTIIISRGGGDFDDLSSFNSENIAKAVYECSIPIISA 227

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHE D+ + D+ AD+RA TPT A E++VP    L++ +  LE++L              
Sbjct: 228 IGHEIDFVICDFVADMRASTPTMAGELSVPDISELRTKIRLLESKLI------------- 274

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
                                          + +  I R      + I++IKS+     I
Sbjct: 275 ------------------------------SSYKNEIIRYKNTLTNCISKIKSNAPYKKI 304

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM-LREQTKNRIFYLHTHIKKLIT 425
              + HI      +E  +K       LE K  I  L + L+ + + +I      +  L  
Sbjct: 305 SDKKNHI----SKLEANLKVEYEKKILELKSYIEKLDLDLKNKYEKKIQQSKNKVDFL-- 358

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
                                 +++   Y   + +G+  ++   +  +   ++L  K  I
Sbjct: 359 --------------------ISVIEENNYVKIMSKGFAIVE-KQSKVVKSSKDLKDKDII 397

Query: 486 LINFFDGQANAIVINK 501
            +   DG  +A+V  +
Sbjct: 398 RVKMIDGTISAVVKGE 413


>gi|188995089|ref|YP_001929341.1| exodeoxyribonuclease VII large subunit [Porphyromonas gingivalis
           ATCC 33277]
 gi|188594769|dbj|BAG33744.1| probable exodeoxyribonuclease VII large subunit [Porphyromonas
           gingivalis ATCC 33277]
          Length = 460

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 97/514 (18%), Positives = 194/514 (37%), Gaps = 75/514 (14%)

Query: 13  PEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRI 64
           P Y++++L+  +++ +ES       V  E SG R    SGH Y  L D         +R+
Sbjct: 2   PSYTLTQLASAVRNCLESGFPGRYWVSAETSGVRV-GISGHCYLELLDKDTSGSQVTARM 60

Query: 65  DAIIWKGTLNKI--EFLPE------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
            A+IW      +   F  E       G+  LV+  ++ +       + I  + PS   G 
Sbjct: 61  KAMIWASDYATLSGRFQRETGETFDSGLHVLVLVSVS-YHEQYGLSLRILDIDPSYTMGA 119

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPL 172
           +    ++  ++L  +GL+       +P   + IA+++S   A   D +  +S     F  
Sbjct: 120 MARKRKEIIEELRRQGLYDLNRSLSLPRPTQRIAIVSSGAAAGYEDFIAHLSHSAEHFCF 179

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
             ++F   +QG +    +  A+ ++            D++++ RGGG++ +L  F+   I
Sbjct: 180 YPVLFQAVMQGAQTEASVLGALERI-----AYHRDSFDVVVIIRGGGAVSELAAFDSLAI 234

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            +A A   +PI++ IGH+ D T+ D  A     TPT  A+  V  +      + +L +R 
Sbjct: 235 GQACARFPLPILTGIGHDRDETVVDLVAYRSLKTPTAVADFLVNCQREEWKLIDDLRSRA 294

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              +  ++ Y    L                      +L       L+  +  ++     
Sbjct: 295 AEGLRMMMMYCHERLI---------------------QLSLRTPAILKSSVREEHHRIKS 333

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           + +RI+       I    Q +    + +  ++K  L+       +  A L +L       
Sbjct: 334 VEDRIRLAA-KQRIAFGLQQLQIASRSLPAMMKSELKQNTGRLDQVAARLPLL------- 385

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
                             ++  +K+ +  +    + ++      TL+RG+  +   +   
Sbjct: 386 ------------------VTANLKNYNRRLETNEQAIRLLHPNATLRRGFAIVL-KDGKA 426

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           I     L    R++  F DG  +A+V      K 
Sbjct: 427 IRSHSELHKGDRLVAQFADGSVSAVVDQPQKGKR 460


>gi|119512646|ref|ZP_01631721.1| Exonuclease VII, large subunit [Nodularia spumigena CCY9414]
 gi|119462717|gb|EAW43679.1| Exonuclease VII, large subunit [Nodularia spumigena CCY9414]
          Length = 407

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 17/362 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWK 70
            SV+ L+ +++ ++E +  L  V V GE+S           +F+L+D  +   I  ++WK
Sbjct: 12  LSVAGLTDYIRLLLEQDNQLRQVWVIGEVSSANNHRRG--LFFTLQDPEATAGIKCVVWK 69

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             + K+  +P  G + +++G I  +P   +YQ+ +   IP+G+G      ++ K +LL E
Sbjct: 70  SQIPKLAQMPIAGEQLIILGSIRVYPQRGEYQLSVWQAIPAGAGLQALGYQQLKNRLLAE 129

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF  + K P+P  P+ IAV+TSPT A   DI + +  R+P L+V+  P  VQG++ P  
Sbjct: 130 GLFDTERKRPLPLHPQTIAVVTSPTAAAWGDIQKTLKQRYPGLQVLFSPATVQGEQAPDS 189

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++N         R  ++IL+RGGG++E+L  FNDE +VRA+A  SIP+I+ IGH
Sbjct: 190 IVKAINRVNR------DGRAQVLILSRGGGAVEELACFNDERVVRAVATCSIPVITGIGH 243

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +L D  AD    TPT AAE  VP    L          L   +        N L  
Sbjct: 244 QRDESLVDLVADACVHTPTAAAETVVPSLADLYFQHRQRIVALREAVGEFTVNSENKLQG 303

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY---RHFNHIINRIKSDFLIHNI 366
           L   L          +  L +L  + +  +++ + R +   +    +  ++ S      +
Sbjct: 304 LRDRLRRLGLD-KQVQQELQQLNWKRQQLIQVTLGRSHQAQQRLELLREKLASLDPKAVL 362

Query: 367 QK 368
           Q+
Sbjct: 363 QR 364



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 6/170 (3%)

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           +  + + +L  ++     H            L     ++RQ I+  ++            
Sbjct: 241 IGHQRDESLVDLVADACVHTPTAAAETVVPSLADLYFQHRQRIVALRE------AVGEFT 294

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           +  E K +     + R     ++      +     ++  +   +       + +    L 
Sbjct: 295 VNSENKLQGLRDRLRRLGLDKQVQQELQQLNWKRQQLIQVTLGRSHQAQQRLELLREKLA 354

Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           S   K  L+RGY  ++  N         L     +LI    G+    V+ 
Sbjct: 355 SLDPKAVLQRGYAVVRRENGEIARSASELTVGEDLLIQLGLGEVKVKVME 404


>gi|239979637|ref|ZP_04702161.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074]
 gi|291451502|ref|ZP_06590892.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074]
 gi|291354451|gb|EFE81353.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074]
          Length = 414

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 12/404 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           ++       V  +S  +   ++  L  V V G+I+       +G  + +L+D    I   
Sbjct: 4   DTSADAPLPVGAVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPAHDISVG 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              ++   + +  +  EG   +V  K   +    +  +    + P G G LL  LE+R+K
Sbjct: 63  VTCYRKVFDAVADVVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLVRLEQRRK 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG 
Sbjct: 123 ALAAEGLFALERKRPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQGV 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++  A+       E    P  D+I++ARGGGS+EDL  F+DE ++R ++ +  P++
Sbjct: 183 HAVAQVTEAVR------ELDAHPEVDVIVVARGGGSVEDLLPFSDEELIRTVSAARTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R       L+  + 
Sbjct: 237 SAIGHEPDTPLLDLVADLRASTPTDAAKKVVPDVGEEHERVRQLRDRARRAAHGLVDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L   L    + +  + +     R+  L       L  ++ R     +H   R+ +   
Sbjct: 297 RGLAHALARPSIQHPHRMVEEREERVSALLDRSRRTLGHLLDRADSELSHTRARVVALSP 356

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
              +Q+    +   +  + +  +       L  +     L + R
Sbjct: 357 AATLQRGYAVLQTAEGAVVRAPEDVAYGAELRARVAEGELVVRR 400



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 42/130 (32%), Gaps = 2/130 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + + + +    +     +          +A   +  +     +      +  L+ R 
Sbjct: 272 EEHERVRQLRDRARRAAHGLVDREERGLAHALARPSI--QHPHRMVEEREERVSALLDRS 329

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H +    + +S T   + + +   TL+RGY  +Q      +    ++A    +  
Sbjct: 330 RRTLGHLLDRADSELSHTRARVVALSPAATLQRGYAVLQTAEGAVVRAPEDVAYGAELRA 389

Query: 488 NFFDGQANAI 497
              +G+    
Sbjct: 390 RVAEGELVVR 399


>gi|256785467|ref|ZP_05523898.1| exodeoxyribonuclease VII large subunit [Streptomyces lividans TK24]
          Length = 390

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 12/370 (3%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTLNK 75
            E+S  +   ++  L  V V G+I+       +G  + +L+D      +    ++   + 
Sbjct: 2   GEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVSVTCYRQVFDA 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           +  +  EG   +V  K   +    +  +    + P G G LL  LE+ KK L  EGLF+ 
Sbjct: 61  VADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQLKKALAREGLFAA 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG     ++  A+
Sbjct: 121 ERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGVHAVPQVVQAV 180

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            +L+           D+I++ARGGGS+EDL  F+DE +VRA+A    P++SAIGHE D  
Sbjct: 181 KELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVVSAIGHEPDSP 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313
           L D  ADLRA TPT AA+  VP        +  L  R    +   +  +   L   L   
Sbjct: 235 LLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDREERGLAHALARP 294

Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            + +  + +     ++  L      +L   + R      H   R+ +      +++    
Sbjct: 295 SIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVALSPAATLKRGYAV 354

Query: 373 ILEKQQHIEQ 382
           +     H  +
Sbjct: 355 LQRADGHAVR 364



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            + +   +     F++++E+    A+     +     I      +  L+ R    L H +
Sbjct: 266 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 325

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               + ++ T   + + +   TLKRGY  +Q  + + +     +     +     +G  +
Sbjct: 326 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 385

Query: 496 AIVI 499
             V 
Sbjct: 386 VRVD 389


>gi|255015908|ref|ZP_05288034.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_1_7]
          Length = 444

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/519 (19%), Positives = 187/519 (36%), Gaps = 96/519 (18%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59
           M P     S +    S+ EL+  ++  +         VR E+S  R   SSGH Y    +
Sbjct: 1   MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60

Query: 60  NH-------SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104
            +       +++   IW  T   ++  F  E G       + LV   +          + 
Sbjct: 61  KNVQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119

Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163
           +  + P+   G ++    +  ++L EEG+F+   + P P +P+ IA+ITSPT A   D +
Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179

Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220
            +++     +P    +FP  +QG+     +  A+ ++   ++       D++++ RGGG+
Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234

Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280
             DL  F+  ++    A   +PII+ IGHE D T+ D  A  R  TPT  AE  +     
Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
                                            + +  + L   R  +  L  ++    +
Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +         ++       +   I++NR  +      +  +V              ++
Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPAMVSG-----------LLS 359

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               + E T+ R+    T       R   +    IK                +    LKR
Sbjct: 360 RRQSVLENTELRLRNGITSKLSESGRFIQLTEQFIKMA--------------SPDYILKR 405

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           GY+     +   I    +L     +   F DG+  +I+ 
Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443


>gi|325280015|ref|YP_004252557.1| Exodeoxyribonuclease 7 large subunit [Odoribacter splanchnicus DSM
           20712]
 gi|324311824|gb|ADY32377.1| Exodeoxyribonuclease 7 large subunit [Odoribacter splanchnicus DSM
           20712]
          Length = 460

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 92/509 (18%), Positives = 187/509 (36%), Gaps = 75/509 (14%)

Query: 16  SVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67
           S+ EL+  +K  ++++    V +  EI+    ++ SGH Y  L D         +     
Sbjct: 6   SLYELNNRIKQTLKASFADSVWITAEITEV-QLNRSGHCYLQLADKREQEDSIVATARGT 64

Query: 68  IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118
           IW  T   +            E+G++ L+  ++  F     Y + I  + P+   G L  
Sbjct: 65  IWAFTFRTLRPYFETTTGRQLEKGMKVLLNVEV-VFHELYGYSLNIRDIDPTYTIGDLER 123

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRVI 175
              +   +L  +G+     +   P +PK IAVI+SPT A + D + ++      +  +V 
Sbjct: 124 KKREILAQLEADGVIDMNRELEFPVLPKTIAVISSPTAAGLGDFMNQLQTNPYGYRFQVK 183

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +FP  +QGD+    +  A+ ++            D++++ RGGGS  DL  F+   +   
Sbjct: 184 LFPAIMQGDKTTDSVIAALERIYE-----YESVFDVVVIIRGGGSQTDLGCFDSYEMAAN 238

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA   +P+I+ IGHE D T+ D  A +R  TPT AA   +         L   +      
Sbjct: 239 IAQFPLPVIAGIGHERDETIVDRVAHMRVKTPTAAAAFLIGTFREQDGQLETWKNDFIVG 298

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +  L+  + N     +                          ++++++     +   +  
Sbjct: 299 VQELLHNEQNRQVVRISDFKR---------------------SVQVVLTGNRTNLKLLSQ 337

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+      H  +   ++       ++  +   +  +   ++ ++       +Q   RI  
Sbjct: 338 RLD-----HASENYIRNRQVYFDRLKMKITGRIDVLADRQRNRLENFGKALQQQTGRI-- 390

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                                  H  + +    ++    KN L+RGY+  +  N   + +
Sbjct: 391 -------------------FADQHRRLELAATTIKYVDPKNVLERGYSITRL-NGKAVRK 430

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPP 504
              L     +      G+    ++N +  
Sbjct: 431 AAVLQAGEIVETELAHGKIQCQILNNSAT 459


>gi|319950220|ref|ZP_08024147.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4]
 gi|319436124|gb|EFV91317.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4]
          Length = 454

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 13/374 (3%)

Query: 1   MN-PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M+       S     + V  +S  +   +   L  V V G+I+       +  A+ +L+D
Sbjct: 1   MSASSPGTQSSPESPWPVRVVSDQIAAWIHR-LGAVWVEGQITQLSLRPGTRTAFLTLRD 59

Query: 60  N--HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
               + +        +++      EG   +V G    + G   + + +  + P G G LL
Sbjct: 60  PSVDNSLTLTCPPRLISESPVPVTEGSRVVVRGTPRFYTGRGSFSLQVSEIRPVGVGELL 119

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +E+ K+ L  EGLF  + K P+PF+P  + +IT    A  RD+++    R+P +R  +
Sbjct: 120 ARIERLKQALAAEGLFDPRLKRPLPFLPTCVGLITGRASAAERDVVEVARGRWPDVRFAV 179

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
               VQG     +I +A      L E    P  D+IILARGGGS+EDL  F+DE ++RAI
Sbjct: 180 RNTAVQGVSAVPQILDA------LAELDADPVVDVIILARGGGSVEDLLPFSDEALIRAI 233

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           +    P++SAIGHE D  L+D  ADLRA TPT AA+  VP     +  +    AR    +
Sbjct: 234 SRCRTPVVSAIGHEPDSPLSDLVADLRAATPTDAAKRVVPDVVEERRRIAEARARTARAL 293

Query: 297 IRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ + N L ++     + N    +      +    R    ++  II  +     H+ 
Sbjct: 294 RGWVERERNQLAAVRSRPCMANPHGIVDSRAEVVAEALRAARRDITRIIDSESTSLGHLS 353

Query: 355 NRIKSDFLIHNIQK 368
            R+ +      + +
Sbjct: 354 ARLTTLGPAATLAR 367



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 4/137 (2%)

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
               +                +      + + +      ++  I S  TS+   +  L +
Sbjct: 299 RERNQLAAVRSRPCMANPHGIVDSRAEVVAEALRAARRDITRIIDSESTSLGHLSARLTT 358

Query: 452 FAYKNTLKRGYTSIQDT----NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
                TL RGY  +Q      +   ++   +    +++ I   DG  +A V+   P   +
Sbjct: 359 LGPAATLARGYAVVQSVAGVHDGRVVSSIADAPPGSQLRIRVSDGALSAAVLGSTPAAGR 418

Query: 508 PTKKCQLHNNKREKQGT 524
            T            + +
Sbjct: 419 TTAPAPTTTGSPTPESS 435


>gi|262384189|ref|ZP_06077325.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_33B]
 gi|262295087|gb|EEY83019.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_33B]
          Length = 444

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/519 (18%), Positives = 187/519 (36%), Gaps = 96/519 (18%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59
           M P     S +    S+ EL+  ++  +         VR E+S  R   SSGH Y    +
Sbjct: 1   MRPNLNNLSGEKEALSLLELNIRIRGALSRAFPETCWVRAEMSDVRVNASSGHCYLEFVE 60

Query: 60  NHSR-------IDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104
            +++       +   IW  T   ++  F  E G       + LV   +          + 
Sbjct: 61  KNAQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119

Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163
           +  + P+   G ++    +  ++L EEG+F+   +   P +P+ IA+ITSPT A   D +
Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELLFPLLPRRIAIITSPTAAGYEDFM 179

Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220
            +++     +P    +FP  +QG+     +  A+ ++   ++       D++++ RGGG+
Sbjct: 180 NQLTRNEGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234

Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280
             DL  F+  ++    A   +PII+ IGHE D T+ D  A  R  TPT  AE  +     
Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
                                            + +  + L   R  +  L  ++    +
Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +         ++       +   I++NR  +      +  +                +
Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPSM---------------AS 355

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            L   R+                   +   ++ K+      + +T + ++  +    LKR
Sbjct: 356 GLLSRRQSVLENTELR----------LRNGITSKLSEDVRFIQLTEQFIKMASPDYILKR 405

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           GY+     +   I    +L     +   F DG+  +I+ 
Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443


>gi|145222665|ref|YP_001133343.1| exodeoxyribonuclease VII large subunit [Mycobacterium gilvum
           PYR-GCK]
 gi|145215151|gb|ABP44555.1| Exodeoxyribonuclease VII large subunit [Mycobacterium gilvum
           PYR-GCK]
          Length = 415

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 14/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62
             +++ +   + V  ++  +   ++  L  V V G+I+      +S  A+ +L+D  +  
Sbjct: 10  PGQSADN--PFPVRGVAIRVAGWIDK-LGAVWVEGQIAQLTLRPNSNTAFITLRDPAADM 66

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +     +  +        +G + +V GK + + G   + + +  +   G G LL  +E+
Sbjct: 67  SLSLTCPRDLVVNAPVKMSDGTQVIVYGKPSFYTGRGTFSLRVSEIRAVGIGELLARIER 126

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            ++ L  EGLF  + K PIPF+P  I +IT    A   DI+   S R+P +R  +    V
Sbjct: 127 LRRLLDAEGLFDPRLKRPIPFLPDTIGLITGRASAAEHDIVAVASGRWPAVRFAVRHTVV 186

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +I +A+  L+        P  D+I+LARGGGS+EDL  F+DE + R IA  + 
Sbjct: 187 QGPNAVPQIVDALRALDA------DPDVDVIVLARGGGSVEDLLPFSDETLCREIARCTT 240

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  L D  ADLRA TPT AA+  VP     Q+ + +L  R    +   + 
Sbjct: 241 PVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALITDLRRRSARALRNWVN 300

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            + + +  L     +      +      + R    +  ++  ++  +     H+  R+ +
Sbjct: 301 RETHVVTQLRSRPVMSRPLAAIDARSDEIHRARAAVRRDITRLVGIESDRIGHLSARLTT 360

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 361 LGPAATLAR 369



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 4/106 (3%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +  +    I      I +    +   ++  +      +   +  L +     TL R
Sbjct: 310 RSRPVMSRPLAAIDARSDEIHRARAAVRRDITRLVGIESDRIGHLSARLTTLGPAATLAR 369

Query: 461 GYTSIQD--TNN--NFITQKRNLATKTRILINFFDGQANAIVINKA 502
           GY  +Q    +     +    +    TR+ +   DG   A      
Sbjct: 370 GYAVVQTIPESGEPRILGSVDDAPAGTRLRVRVADGAITATSEGGQ 415


>gi|256374876|ref|YP_003098536.1| exodeoxyribonuclease VII, large subunit [Actinosynnema mirum DSM
           43827]
 gi|255919179|gb|ACU34690.1| exodeoxyribonuclease VII, large subunit [Actinosynnema mirum DSM
           43827]
          Length = 420

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 12/373 (3%)

Query: 1   MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M     +     P   + V  ++Y +   +   L  V V G+++       +  A+ +L+
Sbjct: 1   MTEQKAQPPRSSPEEPWPVRTVAYKIADWI-GRLGDVWVEGQVTQLSARPGTKVAFLTLR 59

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
           D  + +   +        E    EG   +V GK   +       + ++ +   G G LL 
Sbjct: 60  DPSADLSMSLTAPVGLVREGQLTEGSRVVVHGKPNYYAARGTISLRVDEIRAVGIGELLA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ +K L  EGLF  + K   PF+P  I ++T    A  RD+L     R+P  R  + 
Sbjct: 120 RIERLRKLLAAEGLFDARRKRRPPFLPNKIGLVTGRASAAERDVLTNAQARWPAARFRVI 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
            V VQG     E+  A      L E    P  D+I+LARGGGS+EDL  F+DE + RA++
Sbjct: 180 NVAVQGPSAVPEVVRA------LGELDADPEVDVIVLARGGGSVEDLLPFSDEALCRAVS 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           +   P++SAIGHE D  L D+ AD+R  TPT A +  VP        L     R    + 
Sbjct: 234 DCRTPLLSAIGHEPDTPLVDHVADVRCSTPTDAGKRVVPDVAEETERLRQARDRARRALR 293

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             +  +   L++L     L +    L      + RL       +   +  +         
Sbjct: 294 GWVDRERKLLDALRTRPALADPHGPLERRSEEVQRLRDRALRAVRNRVDAENAGLAATSA 353

Query: 356 RIKSDFLIHNIQK 368
           R+ +      + +
Sbjct: 354 RLTTLGPAATLAR 366



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                          +      +++L  R    + +++ + +  ++ T+  L +     T
Sbjct: 304 DALRTRPALADPHGPLERRSEEVQRLRDRALRAVRNRVDAENAGLAATSARLTTLGPAAT 363

Query: 458 LKRGYTSIQ--DTNNN--FITQKRNLATKTRILINFFDGQANAIV 498
           L RGY  +Q   +      +    +    TR+ +   DG  +A+V
Sbjct: 364 LARGYAVVQLVSSEGTEGVLRSAADAPAGTRLRVRVADGAVHAVV 408


>gi|254423650|ref|ZP_05037368.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. PCC
           7335]
 gi|196191139|gb|EDX86103.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. PCC
           7335]
          Length = 406

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 15/359 (4%)

Query: 17  VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK--DNHSRIDAIIWKGT 72
           V+ L+ +LK ++E +  L  V V GE+S           +F+L+  D  + I  ++WK  
Sbjct: 15  VAGLTDYLKLLLEEDAHLHKVWVVGEVSSANHHRQG--CFFTLQEPDGSAAISCVVWKSQ 72

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           L ++   P+ G +  V+G+I  +P    YQ+ +  ++P+G G       + + +L  EGL
Sbjct: 73  LPRLTTAPKVGEQVTVLGQIRLYPKRGTYQLTVWQVLPAGEGLQALRYRRLRARLAAEGL 132

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F +  K P+P  P+++AV+TS   A   DI + +  R P LRV++ P  VQG + P  IA
Sbjct: 133 FDEDRKRPLPAYPRMLAVVTSIQAAAWGDIQRTLVQRSPGLRVLLSPAVVQGPQAPASIA 192

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI +++         R D+++LARGGG++EDL  F+DE +V AIA S IP+++ IGH+ 
Sbjct: 193 KAIARVDR------DGRADVLMLARGGGAVEDLACFDDERVVMAIAASPIPVVTGIGHQR 246

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D +LAD  AD  A TPT AAEM  P  + L    +N   R   ++ R +++    + SL 
Sbjct: 247 DESLADLVADACAHTPTAAAEMITPSLDELYQEQVNYLQRAGQVVARRLQHAQAQVQSLR 306

Query: 312 KALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L     D+ L+  +  L    ++L   +   +  +      +   + +      +++
Sbjct: 307 TRLQRQRVDRQLTQHQKSLVWQKQQLISAINQRLQHQQHQHQLLQEILVTLDPQAVLKR 365



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 6/161 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKI 399
            ++      ++    +       +     + E  Q     +++  +   R +   + +  
Sbjct: 244 HQRDESLADLVADACAHTPTAAAEMITPSLDELYQEQVNYLQRAGQVVARRLQHAQAQVQ 303

Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           ++   L R++   ++      +     ++   ++ +++       +   IL +   +  L
Sbjct: 304 SLRTRLQRQRVDRQLTQHQKSLVWQKQQLISAINQRLQHQQHQHQLLQEILVTLDPQAVL 363

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           KRGY  ++       T    L   T + I    G+  A V 
Sbjct: 364 KRGYAIVKTA-GEIATDANQLPPGTELEIQLGKGKVKATVS 403


>gi|269795926|ref|YP_003315381.1| exodeoxyribonuclease VII large subunit [Sanguibacter keddieii DSM
           10542]
 gi|269098111|gb|ACZ22547.1| Exodeoxyribonuclease VII large subunit [Sanguibacter keddieii DSM
           10542]
          Length = 427

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
               ++     + V  LS  +   ++  ++ + V G++        +G A+ +L+D  + 
Sbjct: 26  AKASDTTAENPWPVRLLSAKISDYIDR-MAPLWVEGQVVQLNRRPGAGMAFLTLRDTDAD 84

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +   ++   L+ +    +EG   +V  K T +     +Q+  + L P G G LL  +E
Sbjct: 85  MSLPVSVYAKVLDGVSAPIDEGAHVVVRAKPTFWTKRGSFQMQADQLKPVGVGELLARIE 144

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K+ L  EGLF    K P+PF+P+++ ++         D++     R+P +R  I  V 
Sbjct: 145 HLKRVLAAEGLFDAGRKKPLPFLPRVVGLVCGRESKAEHDVVVNARARWPQVRFEIREVA 204

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +++ AI       E    P  ++I++ARGGG++EDL  F++E +VRA +   
Sbjct: 205 VQGVSAVPQVSAAIA------ELDAHPDVEVIVVARGGGAVEDLLPFSNEALVRAASACR 258

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHETD  L D  AD RA TPT AA+  VP     ++ L     R+ + +   +
Sbjct: 259 TPLVSAIGHETDAPLLDLVADYRASTPTDAAKRIVPDVSEERARLTQALGRMRSAVTHRV 318

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L++      L      +      ++   R     L+ ++       + +  +++
Sbjct: 319 RQEQAGLDATRSRPVLAAPHTMIETRERDVEAAVRAGRSGLDRLLSSASSTVDRLAAQVR 378

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 379 ALSPAATLDR 388



 Score = 97.9 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 55/150 (36%), Gaps = 5/150 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++   ++       ++    + E++  + Q + +    +    +++ A L   R +    
Sbjct: 276 LVADYRASTPTDAAKRIVPDVSEERARLTQALGRMRSAVTHRVRQEQAGLDATRSRPVLA 335

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                I      ++  +      L   + S  ++V      +++ +   TL RGY  +Q 
Sbjct: 336 APHTMIETRERDVEAAVRAGRSGLDRLLSSASSTVDRLAAQVRALSPAATLDRGYAVVQG 395

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAI 497
            + + +    ++AT   + I    G+  A 
Sbjct: 396 PDGSVVRSPDDVATGDALRIRLASGEITAT 425


>gi|296271023|ref|YP_003653655.1| exodeoxyribonuclease VII large subunit [Thermobispora bispora DSM
           43833]
 gi|296093810|gb|ADG89762.1| exodeoxyribonuclease VII, large subunit [Thermobispora bispora DSM
           43833]
          Length = 402

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 15/370 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + K S + P   +  +   +   +   L  V V G+I+        G  + +L+D  + 
Sbjct: 1   MTAKTSPESP-LPIRSVLQMVAQWI-GRLGTVWVEGQITELTAR--GGTVFLTLRDPVAN 56

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + A  +  +         P +G   ++  K   +     +      + P G G LL  LE
Sbjct: 57  VSARVLCSRSVYEATVPRPVDGARVVMHVKADFYVNKGSFAFTALEIRPVGIGELLARLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF+ + K  +PF+P+ I +I     A  RD+L+    R+P +R  + PV 
Sbjct: 117 RLRQTLAAEGLFNVERKRRLPFLPRNIGLICGRGSAAERDVLENARRRWPAVRFTVEPVA 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A+ +L+        P  D+II+ARGGGS+EDL  F+DE +VRA+A   
Sbjct: 177 VQGPYAVAEIIEALRKLDA------DPGIDVIIIARGGGSLEDLLPFSDEALVRAVAACR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP      + +  L  R   +I   I
Sbjct: 231 TPVVSAIGHEQDTPLLDLVADLRASTPTDAAKKVVPDVGEELALIHQLRERGRRVIGGWI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L ++     L +  + +     ++D L       L  ++ R      H+  R+ 
Sbjct: 291 ARESAWLEAVRSRPSLADPLREIDRRAEQIDSLRDRSRRCLAGMLDRAADSLEHLRARLV 350

Query: 359 SDFLIHNIQK 368
           +      +Q+
Sbjct: 351 ALSPAATLQR 360



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 5/162 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
             +      ++  +++       +K    + E+   I Q+ ++  R I      + A L 
Sbjct: 239 HEQDTPLLDLVADLRASTPTDAAKKVVPDVGEELALIHQLRERGRRVIGGWIARESAWLE 298

Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +R +         I      I  L  R    L+  +     S+      L + +   TL
Sbjct: 299 AVRSRPSLADPLREIDRRAEQIDSLRDRSRRCLAGMLDRAADSLEHLRARLVALSPAATL 358

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           +RGY  +Q  +   +     +     + + F D +   I  +
Sbjct: 359 QRGYAIVQRPSGEVVRLAGEVRPGDELSVRFSDDRVTVIASD 400


>gi|309812409|ref|ZP_07706164.1| exodeoxyribonuclease VII, large subunit [Dermacoccus sp. Ellin185]
 gi|308433714|gb|EFP57591.1| exodeoxyribonuclease VII, large subunit [Dermacoccus sp. Ellin185]
          Length = 479

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P    ++     + V  LS  +   V+  +S + V G+I        +  AY +L+D   
Sbjct: 15  PALAGDTTAEQPWPVRVLSMKIAQYVDR-MSPLWVEGQIVQLNVRART--AYLTLRDADV 71

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +   +   TLN +     EG   +V  K T +       +   ++ P G G LL  L
Sbjct: 72  DMSLSLTVPTNTLNAMGPAVREGARVVVHAKPTFWTKRGSLMMEGRTMRPVGEGELLLRL 131

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K+ L  EGLF+   K P+PF+P++I +IT   GA   D+++    R+P     I  V
Sbjct: 132 EQLKRTLDAEGLFAPDRKRPLPFLPRVIGLITGREGAAENDVVENARRRWPAAHFEIRHV 191

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +C   ++ A      L+E       D+I++ARGGGS EDL  F++E +VRA++ +
Sbjct: 192 PVQGPDCVTAVSGA------LRELDGLDHVDVIVIARGGGSFEDLLGFSNETLVRAVSAA 245

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGH+ D  L D+ AD RA TPT AA++ VP     Q++L    ARL+  +   
Sbjct: 246 RTPVVSAIGHDVDTPLLDHVADRRASTPTDAAKLVVPDLAAEQTALAQHRARLSQGLRGR 305

Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
              +   LN       L      ++  R  +DRL     + +   + R      H   ++
Sbjct: 306 FAAERRHLNSLVGRPVLREPGTLVTQQRDEVDRLTNRSAYAMRQRLTRARDQIAHGRAQV 365

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 366 VALSPQKTLDR 376



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 54/163 (33%), Gaps = 4/163 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +   +  + + +  + Q +    R+    +     +   +  +    +      + +L  
Sbjct: 284 LAAEQTALAQHRARLSQGL--RGRFAAERRHLNSLVGRPVLREPGTLVTQQRDEVDRLTN 341

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R  + +  ++      ++     + + + + TL RGY  +Q  + + +  + +++    +
Sbjct: 342 RSAYAMRQRLTRARDQIAHGRAQVVALSPQKTLDRGYAVVQHADGSLVMARDDVSVDDIL 401

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNN--KREKQGTQG 526
            +    G       +  P   +               K+ TQG
Sbjct: 402 KVTVSQGNFAVTPYSGKPRTRRAGTPTTTKARTAASSKKATQG 444


>gi|34540858|ref|NP_905337.1| exodeoxyribonuclease VII large subunit [Porphyromonas gingivalis
           W83]
 gi|34397172|gb|AAQ66236.1| exodeoxyribonuclease VII, large subunit [Porphyromonas gingivalis
           W83]
          Length = 460

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 96/513 (18%), Positives = 195/513 (38%), Gaps = 75/513 (14%)

Query: 13  PEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRI 64
           P Y++++L+  +++ +ES       V  E SG R    SGH Y  L D         +R+
Sbjct: 2   PSYTLTQLASAVRNCLESGFPGRYWVSAETSGVRV-GISGHCYLELLDKDTSGSQVTARM 60

Query: 65  DAIIWKGTLNKI--EFLPE------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
            A+IW      +   F  E       G+  LV+  ++ +       + I  + PS   G 
Sbjct: 61  KAMIWASDYATLSGRFQRETGETFDSGLHVLVLVSVS-YHEQYGLSLRILDIDPSYTMGA 119

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPL 172
           +    ++  ++L  +GL+       +P   + IA+++S   A   D +  +S     F  
Sbjct: 120 MARKRKEIIEELRRQGLYDLNRSLSLPRPTQRIAIVSSGAAAGFEDFIAHLSHSAEHFCF 179

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
             ++F   +QG +    +  A+ ++            D++++ RGGG++ +L  F+   I
Sbjct: 180 YPVLFQAVMQGAQTEASVLGALERI-----AYHRDSFDVVVIIRGGGAVSELAAFDSLAI 234

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            +A A   +PI++ IGH+ D T+ D  A     TPT  A+  V  +      + +L +R 
Sbjct: 235 GQACARFPLPILTGIGHDRDETVVDLVAYRSLKTPTAVADFLVNCQREEWKLIDDLRSRA 294

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              +  ++ Y    L                      +L       L+  +  ++     
Sbjct: 295 AEGLRMMMMYCHERLI---------------------QLSLRTPAILKSSVREEHHRIKS 333

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           + +RI+           +Q I    Q ++   +     +  E K+    L  +       
Sbjct: 334 VEDRIRL--------AAKQRIAFGLQQLQIASRSLPALMKSELKQNTGQLDQV------- 378

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
                        R+  +++  +K+ +  +    + ++      TL+RG+  +   ++  
Sbjct: 379 -----------AARLPLLVTANLKNYNRRLETNEQAIRLLHPNATLRRGFAIVL-KDDKA 426

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I     L     ++  F DG  +A+V      K
Sbjct: 427 IRSHSELHKGDHLVAQFADGSVSAVVDQPQKGK 459


>gi|262182739|ref|ZP_06042160.1| exodeoxyribonuclease VII large subunit [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 413

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L  + V G+I+      +   +Y +L+D    
Sbjct: 1   MNQPANSAETPWPVGKVNDQVKGWIER-LGFLWVEGQITQLNMKPTWKLSYITLRDVEQE 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        +       ++G   +V GK   + G   + + +  +   G G LL  +E
Sbjct: 60  KSVQLTCNTSLIRNAPSPLKDGDRVVVYGKPAFYAGRGSFSLWVTEIRHVGIGDLLARVE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             ++KL +EGL     K P+P++PK I +IT       RD+L     R+P ++  +    
Sbjct: 120 MLRQKLRQEGLCDPSRKLPLPYLPKKIGLITGRGSHAERDVLSVAQDRWPAVQFNVINTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     ++ +A+  L+        P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 180 VQGATAVTQVIDALRTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAEAR 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP      + +    +R+   +   +
Sbjct: 234 TPVVSAIGHEPDHPVLDDVADLRAATPTDAAKRVVPSASKEYALISEARSRMAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L ++     L +    ++  R  L+R    +   +   + R+      +  R+ 
Sbjct: 294 DRERRGLENIRSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVS 353

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 354 ALGPSATLER 363



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +       I      +++ +  I  ++SH++      V+     + +     TL+R
Sbjct: 304 RSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVSALGPSATLER 363

Query: 461 GYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQAN 495
           GY  +    +D +    +T        +++ I   DG   
Sbjct: 364 GYAIVQVLPRDGSGPEVVTSYTQSPPGSQLRIRVGDGSIT 403


>gi|86606620|ref|YP_475383.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. JA-3-3Ab]
 gi|86555162|gb|ABD00120.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp.
           JA-3-3Ab]
          Length = 411

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 117/399 (29%), Positives = 206/399 (51%), Gaps = 16/399 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           FS+  +   P  SV  +S +LK ++  +  L+ + V GE+S       +GH + +L D  
Sbjct: 3   FSKFRTRGLPLLSVGGVSGYLKSLLAGDPYLARLWVVGEVSSC-QRSRNGHLFLTLVDPE 61

Query: 62  S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           S   +  ++W+    ++ F PE G   L +G++  + G S Y+++I  L+P+G G L   
Sbjct: 62  SGDLLKGVVWQSQTARLSFWPEVGQRVLALGQLGIYSGGSYYRLVIWQLLPAGEGLLAWR 121

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
            ++ K +L  EGLF +Q    +P  P+ IAV++SP  A   DI + ++ R+P LRV+  P
Sbjct: 122 FQQLKARLAAEGLFDNQRP--LPTHPQCIAVVSSPDAAGWGDIRRTLNQRYPGLRVLFAP 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
            +VQG+  P+ I  AI ++          R +++I+ARGGGS EDL  FNDE +VRAIA 
Sbjct: 180 AQVQGEAAPESIVRAIRRVER------DGRAEVLIVARGGGSGEDLACFNDERVVRAIAE 233

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            SIP+++ IGH+ D TLADYAAD  A TPT AAE  VP    LQ     L  +L    + 
Sbjct: 234 CSIPVVTGIGHQRDETLADYAADYAAHTPTAAAERVVPDLRELQRQAFQLRQQLVERTLH 293

Query: 299 LIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++      +   + L   + ++ L  ++ RL +  + L   +   + ++ +    +   
Sbjct: 294 ALEKAEQRWHHAQRRLAQVHPERLLQQAQERLAQQQQRLVQAVRHRLQQQQQRHQALQQH 353

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +++      +++    + +++  + +  +   +     +
Sbjct: 354 LQALDPAAVLRRGYALVRDERGSLVRSHRLPPQTRLRIQ 392



 Score = 83.7 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 6/169 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-----LEKKEK 398
            ++            +       ++    + E Q+   Q+ +Q +          E++  
Sbjct: 244 HQRDETLADYAADYAAHTPTAAAERVVPDLRELQRQAFQLRQQLVERTLHALEKAEQRWH 303

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            A   + +   +  +      + +   R+   + H+++          + LQ+      L
Sbjct: 304 HAQRRLAQVHPERLLQQAQERLAQQQQRLVQAVRHRLQQQQQRHQALQQHLQALDPAAVL 363

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           +RGY  ++D   + +     L  +TR+ I    G   A V     P + 
Sbjct: 364 RRGYALVRDERGSLVRS-HRLPPQTRLRIQLASGSLWARVEESHEPPQT 411


>gi|88856100|ref|ZP_01130761.1| exodeoxyribonuclease VII large subunit [marine actinobacterium
           PHSC20C1]
 gi|88814668|gb|EAR24529.1| exodeoxyribonuclease VII large subunit [marine actinobacterium
           PHSC20C1]
          Length = 406

 Score =  220 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 16/370 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
           F++        + VS LS  ++  +E  L +  V GEI+ +    S G+ Y  LKD    
Sbjct: 3   FTEGPPTVDTPWPVSVLSQKIRGWIER-LGNAWVEGEITQWGS--SGGNIYGKLKDLEVD 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + I   IW     K+    ++G   + + K   +       + +  +   G G LL  LE
Sbjct: 60  ATISFTIWSSVRTKLPNDLKQGDRVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLEKLE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             ++KL  EGLF  +    +PF+P  I ++T       +D+L+    R+P ++       
Sbjct: 120 LLRQKLRAEGLFEHKKP--LPFLPNCIGLVTGKDSDAEKDVLRNAQLRWPAVKFRTEHAA 177

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG+    E+  AI  L+        P  D+II+ARGGG  ++L  F+DE +VRA A   
Sbjct: 178 VQGERAVSEVTKAIRLLDA------DPEVDVIIVARGGGDFQNLLVFSDESLVRAAAECV 231

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP      S +    A +   I + +
Sbjct: 232 TPLVSAIGHENDRPLLDEVADLRASTPTDAAKRVVPDVAEELSRVQQARAGMRLRITQRL 291

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + + L SL     L N    +      L R        +E  I + +     +  +++
Sbjct: 292 GNEGDRLESLRTRPVLANPVSLIDSHADELSRYVSRSIELVERAIEKAHAGATELTGQLR 351

Query: 359 SDFLIHNIQK 368
           +      +Q+
Sbjct: 352 ALSPQRTLQR 361



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 47/130 (36%)

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q      ++   R      + +      +     + I      + + ++R   ++   I
Sbjct: 277 QQARAGMRLRITQRLGNEGDRLESLRTRPVLANPVSLIDSHADELSRYVSRSIELVERAI 336

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           +  H   +  T  L++ + + TL+RGY   Q  +   +    +    T +++   DG+ +
Sbjct: 337 EKAHAGATELTGQLRALSPQRTLQRGYAIAQLPDGTAVRSTSDAPDGTELMLTVADGKIS 396

Query: 496 AIVINKAPPK 505
             V  +    
Sbjct: 397 TTVTGQPADT 406


>gi|304382684|ref|ZP_07365178.1| exodeoxyribonuclease VII large subunit [Prevotella marshii DSM
           16973]
 gi|304336309|gb|EFM02551.1| exodeoxyribonuclease VII large subunit [Prevotella marshii DSM
           16973]
          Length = 431

 Score =  220 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 92/507 (18%), Positives = 173/507 (34%), Gaps = 98/507 (19%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63
               S+ EL+  +K ++E ++     V  E+S  R     GH Y  L  KD       ++
Sbjct: 2   QKALSLYELNSLVKEVLEISMPEEYWVEAELSEVRENR--GHCYMELIEKDEQSHTAVAK 59

Query: 64  IDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114
             A  W+   + +              G++ L+            +  I+  + P+   G
Sbjct: 60  ASAKCWRNVWSTLSTHFMRVTGQSLHAGMKLLLRVYPQFHEAYG-FSWIVSDIDPTFTMG 118

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFP 171
            +    ++  ++L EEG+F    +  IP   K IAVI+S T A   D L ++      F 
Sbjct: 119 DMARKRQEIIRRLKEEGVFDLNKELSIPMFVKHIAVISSSTAAGYGDFLNQLKDNAYGFA 178

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
               +F   +QG+     I +A+  +N         R D++++ RGGG+  DL  F+  +
Sbjct: 179 FEPQLFDAVMQGEGVEASIISALNAINA-----EADRFDVVVIIRGGGATSDLSGFDTLL 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   IAN  +P+I+ IGH+ D ++ D  +     TPT AA   +                
Sbjct: 234 LAENIANFPLPVITGIGHDRDESILDMVSHTSVKTPTAAAAFLI---------------- 277

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
                                        L     ++D   R +   +   +  +     
Sbjct: 278 ---------------------------DRLQRVDEQIDECKRVVVRAVTRKMEAERLRLG 310

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
            I + I                      +  +V+     +     ++IA L         
Sbjct: 311 RISSNIPM--------------------LFSLVRTREEALLDSLHQRIATLAH------A 344

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
                  H++ L  R+  +  H++   +  + +      +      L+RGY+     N  
Sbjct: 345 YFSANSQHLQTLWLRLLPLAEHRLMHENHRIELLAEKAIALDPSMLLQRGYSMTLH-NGK 403

Query: 472 FITQKRNLATKTRILINFFDGQANAIV 498
            +     L    +I      G   ++V
Sbjct: 404 VVKDAAQLHCGDKIKTRLAKGVIESVV 430


>gi|296118160|ref|ZP_06836741.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968718|gb|EFG81962.1| exodeoxyribonuclease VII, large subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 413

 Score =  220 bits (559), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L  + V G+++      +   +Y +L+D    
Sbjct: 1   MAQTVNSPAAPWPVGKVNDQVKGWIEK-LGFLWVEGQLTQINIKSTWKLSYLTLRDIEQQ 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        +  +    ++G   +V GK   + G   + +    +   G G LL  +E
Sbjct: 60  KSVQLTCPTDLVRNLPTPLKDGDRVVVYGKPAFYAGRGSFSLWTTDIRHVGIGELLARIE 119

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             +K+L  EGL     K P+PF+PK + +IT    A  RD+L     R+P ++  +    
Sbjct: 120 ALRKQLTAEGLTDPARKKPLPFLPKKVGLITGRGSAAERDVLAVSQDRWPAVQFRVINTA 179

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     ++ +A+  L+        P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 180 VQGTGTVAQVVDALQLLDA------DPEIDVIIIARGGGSVEDLLPFSEEALQRAVAAAH 233

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  AD+RA TPT AA+  VP        +     R+   +   +
Sbjct: 234 TPVVSAIGHEPDNPVLDNVADVRAATPTDAAKRVVPDVALEYDRIAESRQRMAAALRGWV 293

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L  L     L +  + ++  R  + RL + +  ++++ + R+    + + +++ 
Sbjct: 294 ERERRGLEQLRSRPVLADPMRAITLQREEVARLQQLMRRDIQVHLERETSRVSALRSQVS 353

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 354 ALGPAATLAR 363



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I E +Q +   ++  +       ++  +    +       I      + +L   +   +
Sbjct: 277 RIAESRQRMAAALRGWVERERRGLEQLRSR--PVLADPMRAITLQREEVARLQQLMRRDI 334

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-----DTNNNFITQKRNLATKTRIL 486
              ++   + VS     + +     TL RGY+ +Q      ++   +T  +     ++I 
Sbjct: 335 QVHLERETSRVSALRSQVSALGPAATLARGYSVVQVLPRDGSDAEVVTSYQQAPPGSQIR 394

Query: 487 INFFDGQANAIVINKAPP 504
           +   DG  +  V+   P 
Sbjct: 395 VRVGDGSLSGAVLGSEPA 412


>gi|238062739|ref|ZP_04607448.1| exodeoxyribonuclease VII large subunit [Micromonospora sp. ATCC
           39149]
 gi|237884550|gb|EEP73378.1| exodeoxyribonuclease VII large subunit [Micromonospora sp. ATCC
           39149]
          Length = 406

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 159/373 (42%), Gaps = 12/373 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           M+      S     + V  +S  +   + + L  V V G+++       +   + +L+D 
Sbjct: 1   MSADESGRSSSDEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDP 59

Query: 61  HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            + +       +  L+       EG   ++  K   +       +  + +   G G LL 
Sbjct: 60  SADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLA 119

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            LEK KK L  EGLF    K  +PF+P  + +IT    A  RD+L     R+P +     
Sbjct: 120 RLEKLKKLLAAEGLFDRARKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVEFRTV 179

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
            V VQG     +I +A+  L+        P  D+I++ARGGG IEDL  F+DE + RA+ 
Sbjct: 180 NVAVQGPGAVPQIVDALKVLDA------DPTVDVIVIARGGGGIEDLLPFSDEALCRAVF 233

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P++SAIGHETD  L DY ADLRA TPT AA+  VP        +     R+   + 
Sbjct: 234 ACRTPVVSAIGHETDAPLVDYVADLRASTPTDAAKRIVPDLTEELRLIQQARHRVERAVR 293

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
            L+  + N L+ L     L      +      +  L +     L+  +        H + 
Sbjct: 294 HLVDREANRLDGLRSRPVLARPQVMVEQRVADVTALRQRAGRTLQHRLGAAEDELRHTLA 353

Query: 356 RIKSDFLIHNIQK 368
           R+++      +++
Sbjct: 354 RLRALSPAATLER 366



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--- 406
               +  +++       ++    + E+ + I+Q   +  R +      +   L  LR   
Sbjct: 251 LVDYVADLRASTPTDAAKRIVPDLTEELRLIQQARHRVERAVRHLVDREANRLDGLRSRP 310

Query: 407 --EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
              + +  +      +  L  R    L H++ +    +  T   L++ +   TL+RGY  
Sbjct: 311 VLARPQVMVEQRVADVTALRQRAGRTLQHRLGAAEDELRHTLARLRALSPAATLERGYAI 370

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           +Q  + + +     +     + +   +G+    V  
Sbjct: 371 VQRADGHVVRAAGEVGGGDPLRVRLAEGELAVTVDG 406


>gi|86742559|ref|YP_482959.1| exodeoxyribonuclease VII large subunit [Frankia sp. CcI3]
 gi|86569421|gb|ABD13230.1| Exodeoxyribonuclease VII large subunit [Frankia sp. CcI3]
          Length = 416

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            S       V  +S  L   + + L  V V G+++G       G  + +L+D  +   + 
Sbjct: 16  TSSPEQPLPVRSVSRALGDWI-NRLGRVWVEGQVTGIVRRPGMGTVFLTLRDPVADVSLR 74

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +   + +     +G   +V GK +  PG     + +  + P G+G LL  LE+ K 
Sbjct: 75  VTCPRAVCDAVGPALVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLEQLKA 134

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K   PF+P  + +IT    A  RD+++    R+P +R+++  V VQG 
Sbjct: 135 TLAAEGLFAASRKRRPPFLPAAVGLITGRASAAERDVVENARRRWPAVRIVLREVAVQGP 194

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++ +A+ +L+   E       ++I++ARGGGS+EDL  F+DE ++RA+  +  P++
Sbjct: 195 LAVAQVIDALRELDARAE------VEVIVIARGGGSLEDLLPFSDEALLRAVVAACTPVV 248

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+RA TPT AA+  VP       ++  L AR   ++   +  + 
Sbjct: 249 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVGEQAIAVAQLRARARRVVEHRLDREE 308

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L        L    + +      +  L       +  +I            R+++   
Sbjct: 309 RWLADTRGRPVLATPTRDVDRRADDVSALLARSRRCVRHVIDVTGNDLAATRARMRALSP 368

Query: 363 IHNIQK 368
              + +
Sbjct: 369 AATLDR 374



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 1/132 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q I   Q           R    E+         +       +      +  L+ R    
Sbjct: 285 QAIAVAQLRARARRVVEHRLDREERWLADTRGRPVLATPTRDVDRRADDVSALLARSRRC 344

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILINF 489
           + H I      ++ T   +++ +   TL RGY  + +  +   +     +A    + I  
Sbjct: 345 VRHVIDVTGNDLAATRARMRALSPAATLDRGYAVVQRTVDGAVVRGPAEVAAGDGLAIRV 404

Query: 490 FDGQANAIVINK 501
             G   A V++ 
Sbjct: 405 AGGTLRATVVDG 416


>gi|257057118|ref|YP_003134950.1| Exodeoxyribonuclease VII large subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256586990|gb|ACU98123.1| Exodeoxyribonuclease VII large subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 419

 Score =  219 bits (558), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 11/341 (3%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65
             S     + V  ++  +   +   L  V V G+I+       +  ++ +L+D  + +  
Sbjct: 13  APSTADNPWPVRTVARKIADWIHR-LGSVWVEGQITQISARPGTQTSFLTLRDPSADVSM 71

Query: 66  -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
                   L   E    +G   +V  + + F G     +  + + P G G LL  +E+ +
Sbjct: 72  TVTCSARLLRTCEPPLRDGASVVVHARPSFFLGRGTLSLRADEIRPVGIGELLARIERLR 131

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           K L  EGLF+ + K PIPF+PK + +IT    A  RD+L     R+P +R  +    VQG
Sbjct: 132 KLLAAEGLFAPERKRPIPFLPKGVGLITGRASAAERDVLVNARARWPAVRFRVINTAVQG 191

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                +I  A+  L+        P  D+I++ARGGGS+EDL  F+DE + RA+A +  P+
Sbjct: 192 ASAVPQILQALATLDA------DPDIDVIVIARGGGSVEDLLPFSDETLCRAVAAAGTPV 245

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SAIGHE D  L D  AD R  TPT A +  VP      + +  L  R    +   +  +
Sbjct: 246 VSAIGHEPDSPLLDLVADRRCSTPTDAGKTVVPDVAEETARIHQLRDRARRALHGWVDTQ 305

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
              L   +++ P+    L    +R   +  ++E     I+ 
Sbjct: 306 R-RLLEQIRSRPSLADPLGPIEHRAAEIEAQVERGRRAILT 345



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           ++   +        +     + E+   I Q+  +  R +      +  +L  +R +    
Sbjct: 260 LVADRRCSTPTDAGKTVVPDVAEETARIHQLRDRARRALHGWVDTQRRLLEQIRSRPSLA 319

Query: 413 -----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466
                I +    I+  + R    +   +    ++++     L +     TL+RGY  +Q 
Sbjct: 320 DPLGPIEHRAAEIEAQVERGRRAILTTVSHEQSALAAARARLAALGPSATLERGYAVVQY 379

Query: 467 -DTNN--NFITQKRNLATKTRILINFFDGQANAIVIN 500
            D       +     +A  T + +   DG   AI   
Sbjct: 380 LDAEGEFRVLRSVSEVAEGTPLRVRLADGAVRAIAGE 416


>gi|297242792|ref|ZP_06926730.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis AMD]
 gi|296889003|gb|EFH27737.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis AMD]
          Length = 492

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 168/371 (45%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYR-GIHSSGHAYFSLKDNH 61
           P    ++     + V+ LS      VE       + G+I        SSG  Y +L+D++
Sbjct: 51  PLKAADTTAENPWPVAILSQKFHSAVER-WPAAWIEGQIVEINMRRASSG--YITLRDSN 107

Query: 62  SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             +  +++      +      +G   +V GK   +  +++   + + +   G+G L   +
Sbjct: 108 EEVSISVMGFSNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 167

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           ++ +KKL  EGLF  ++K P+P  PK I ++ +P      D++  ++ R+P+ R  +   
Sbjct: 168 DELRKKLKGEGLFDAENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHA 227

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP +I  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  
Sbjct: 228 HVQGVQCPADIIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 281

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE DWTL D AAD+RA TPT AA+  VP        + N    +   I   
Sbjct: 282 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISAR 341

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +I  +        L      L      +++    + H L  ++             +
Sbjct: 342 VDNEIRLVEGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASL 401

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 402 TALSPQSTLNR 412



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/183 (10%), Positives = 52/183 (28%), Gaps = 7/183 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E+ Q I+  ++  +R     + +    L 
Sbjct: 291 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 349

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     +    +      +++ + R+   L   +     +V      L + + ++T
Sbjct: 350 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 409

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           L RGY  +Q +    +           + +    G     V        +          
Sbjct: 410 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSTGTKVAAGKSAGVQ 469

Query: 518 KRE 520
           K E
Sbjct: 470 KSE 472


>gi|283782921|ref|YP_003373675.1| exodeoxyribonuclease VII, large subunit [Gardnerella vaginalis
           409-05]
 gi|283441706|gb|ADB14172.1| exodeoxyribonuclease VII, large subunit [Gardnerella vaginalis
           409-05]
          Length = 491

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYR-GIHSSGHAYFSLKDNH 61
           P    ++     + V+ LS      VE       + G+I        SSG  Y +L+D++
Sbjct: 71  PLKAADTTAENPWPVAVLSQKFHSAVER-WPAAWIEGQIVEINMRRASSG--YITLRDSN 127

Query: 62  SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             +  +++      +      +G   +V GK   +  +++   + + +   G+G L   +
Sbjct: 128 EEVSISVMGFSNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 187

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           ++ +KKL  EGLF  ++K P+P  PK + ++ +P      D++  ++ R+P+ R  +   
Sbjct: 188 DELRKKLKGEGLFDAENKVPLPEFPKCVGLVCAPQARAEGDVITNVNLRWPVTRFKVIHA 247

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP +I  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  
Sbjct: 248 HVQGVQCPADIIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 301

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE DWTL D AAD+RA TPT AA+  VP        + N    +   I   
Sbjct: 302 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISAR 361

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +I  +        L      L      +++    + H L  ++             +
Sbjct: 362 VDNEIRLVEGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASL 421

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 422 TALSPQSTLNR 432



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 17/182 (9%), Positives = 52/182 (28%), Gaps = 7/182 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E+ Q I+  ++  +R     + +    L 
Sbjct: 311 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 369

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     +    +      +++ + R+   L   +     +V      L + + ++T
Sbjct: 370 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 429

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           L RGY  +Q +    +           + +    G     V        +         +
Sbjct: 430 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSAVTKSAFIKPSKKS 489

Query: 518 KR 519
            +
Sbjct: 490 SK 491


>gi|227504070|ref|ZP_03934119.1| exodeoxyribonuclease VII large subunit [Corynebacterium striatum
           ATCC 6940]
 gi|227199336|gb|EEI79384.1| exodeoxyribonuclease VII large subunit [Corynebacterium striatum
           ATCC 6940]
          Length = 419

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L  + V G+++      S   +Y +L+D    
Sbjct: 7   VNQPANSPETPWPVGKVNDQVKGWIER-LGFLWVEGQLTQVNVKRSWKLSYLTLRDVEQE 65

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        + K+    ++G   +V GK   + G   + +    +   G G LL  +E
Sbjct: 66  KSVQLTCPTDMVLKMPTPLKDGDRVVVYGKPAFYAGRGSFSLWTTEIRHVGVGDLLARIE 125

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             +++L +EGLF    K P+P++P  + +IT    A  RD+L     R+P ++  +    
Sbjct: 126 MLRQQLAKEGLFDPSRKLPLPYLPHKVGLITGRGSAAERDVLAVAKDRWPAVQFRVINTA 185

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     ++ +A+  L+        P  D+II+ARGGGS+EDL  F++E + RA+A++ 
Sbjct: 186 VQGANTVPQVIDALQTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVASAQ 239

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP      + +    +R+   +   +
Sbjct: 240 TPVVSAIGHEPDNPVLDNIADLRAATPTDAAKRVVPSVAEEYALIDEARSRMAAALRGWV 299

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + +   L ++     L +    ++  R  L+R    +  ++  ++ ++      +  ++ 
Sbjct: 300 ERERRGLENIRSRPVLADPMTPINARREELERSRALINRDIRYLLDKETNRIAALRAQVS 359

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 360 ALGPSATLER 369



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 50/151 (33%), Gaps = 10/151 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E+   I++   +    +    + +   L  +R +      
Sbjct: 259 ADLRAATPTDAAKRVVPSVAEEYALIDEARSRMAAALRGWVERERRGLENIRSRPVLADP 318

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI---- 465
              I      +++    I   + + +      ++     + +     TL+RGY+ +    
Sbjct: 319 MTPINARREELERSRALINRDIRYLLDKETNRIAALRAQVSALGPSATLERGYSIVQVVP 378

Query: 466 QDTNN-NFITQKRNLATKTRILINFFDGQAN 495
           +D +    +T        +++ I   DG   
Sbjct: 379 RDGSGPEVVTSYEQSPPGSQLRIRVGDGSIT 409


>gi|310658651|ref|YP_003936372.1| exodeoxyribonuclease 7 large subunit [Clostridium sticklandii DSM
           519]
 gi|308825429|emb|CBH21467.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Clostridium sticklandii]
          Length = 403

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/364 (30%), Positives = 192/364 (52%), Gaps = 16/364 (4%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     SV+EL+ ++  I+ SN  L +  V GE+   +     G+ +FSLKD +S+I+ I
Sbjct: 1   MKIKTLSVTELNNYISKIINSNPLLHNFSVSGEVFNLKQTQY-GYIFFSLKDENSKINCI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
            +       +    +G + +V GK+  +  +  Y II++     G G      EK KK L
Sbjct: 60  YFSEN----KVTISDGDKLVVEGKLNIYEKNGTYSIIVKKFNSIGLGDSYLEFEKIKKAL 115

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186
            EEG F   +K P+P  P+ I ++TS +GA I+DI++    R+P + ++I+  K+QG E 
Sbjct: 116 EEEGYFDKSNKKPLPKHPQKIGIVTSISGAAIKDIIKLAQKRYPIIEIVIYNAKMQGQEA 175

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
              I   I  LN           ++IIL RGGGS ++L  FN+EMI ++I  S  PIISA
Sbjct: 176 VINIVEGINMLN------NIEDIELIILTRGGGSYDELSIFNNEMIAKSIFESKKPIISA 229

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHE D+ ++D+ AD RA TP+ A E  +P   H+++ ++ L+ +++  + R +++    
Sbjct: 230 IGHEIDFVISDFVADARASTPSSAIENFLPDINHIETYIMQLKEKIDYSLNRKLEFHKIN 289

Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
           L +++  L   N    L+ +R  +  +   L++++   + ++        +++ S   I 
Sbjct: 290 LGNIVSILEKSNFSYKLANNRKDIFNMKIRLDYSIYKSVNKEKNSIEKFGDKLSSLNPIE 349

Query: 365 NIQK 368
            I K
Sbjct: 350 IINK 353



 Score = 77.1 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 3/142 (2%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEF 429
           HI      +++ +   L       K  +  +  + E      ++      I  +  R+++
Sbjct: 263 HIETYIMQLKEKIDYSLNRKLEFHKINLGNIVSILEKSNFSYKLANNRKDIFNMKIRLDY 322

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            +   +     S+      L S      + +GY  I D +   IT    ++    + I  
Sbjct: 323 SIYKSVNKEKNSIEKFGDKLSSLNPIEIINKGYAII-DKDKAIITTINQISVDDIVNIKL 381

Query: 490 FDGQANAIVINKAPPKEQPTKK 511
            DG A A +I+      +  KK
Sbjct: 382 SDGIATAKIISVRNEDRKNEKK 403


>gi|317495195|ref|ZP_07953565.1| exodeoxyribonuclease VII [Gemella moribillum M424]
 gi|316914617|gb|EFV36093.1| exodeoxyribonuclease VII [Gemella moribillum M424]
          Length = 419

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 204/373 (54%), Gaps = 20/373 (5%)

Query: 15  YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ ++  K +++  LS + ++GEIS  + +H++ + YFS+KD ++RI+A+ +   
Sbjct: 7   LTVTALNKYIEKKFLLDPYLSEIYIKGEISNLK-LHNNNNMYFSIKDENTRINAVWFG-- 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +EF  ++G   L+  K+  +    +Y +++  +     G L     + K+KL +EGL
Sbjct: 64  AKNLEF--KDGDTVLIKSKVNFYYPRGEYNLLVMDIRKDRIGELYQKFLELKEKLEKEGL 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F+ Q+K  IP   + I VIT+ TGA I+DI + I  RFP+  + ++   VQG+   ++I 
Sbjct: 122 FAPQYKKSIPKFSQNIGVITAQTGAAIQDITRTIQRRFPIANINVYSTLVQGEASVQDIV 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   +           D+IIL RGGG+IEDLW FN E ++RAI N   PI++ IGHET
Sbjct: 182 KNIKLADE-------DNNDVIILGRGGGTIEDLWSFNTEEVIRAIFNCKTPIVTGIGHET 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ +D RA TPT AAE+  P  E +++ L   + +L N I  +I+   N + + +
Sbjct: 235 DTTLADFVSDKRASTPTAAAELVTPNIEDIKNRLNFNKDKLYNRINFIIQGYKNRVQNSI 294

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           +     N D      R ++    R+L   +E  +  K  + ++   +IK+  +   + K+
Sbjct: 295 ENPYFKNYDNIYVEYRKKILLFERDLSRVIESNLRDKKLNLSYTCEKIKNIDV---LVKH 351

Query: 370 RQHILEKQQHIEQ 382
           ++    K + +E 
Sbjct: 352 KEKFSRKVERLEA 364



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFILSHKI 435
           Q  IE    ++   I++E ++KI +      +  ++ +     ++     +I+ I    +
Sbjct: 291 QNSIENPYFKNYDNIYVEYRKKILLFERDLSRVIESNLRDKKLNLSYTCEKIKNI--DVL 348

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
                  S     L++ +  N LK+GY+     N   +     +  K  + I   DG   
Sbjct: 349 VKHKEKFSRKVERLEANSPLNILKKGYSITFSDNKKIV-SIHEVNRKDNLSIRLIDGIVE 407

Query: 496 AIVINK 501
             V + 
Sbjct: 408 CEVTDI 413


>gi|170782741|ref|YP_001711075.1| exodeoxyribonuclease VII large subunit [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|189037851|sp|B0RH22|EX7L_CLAMS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|169157311|emb|CAQ02498.1| putative exoribonuclease large subunit [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 438

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P +   ++D P + VS LS  +K  ++  L    V GEI+ + G  S G+ Y  LKD   
Sbjct: 10  PAADAPTVDAP-WPVSVLSGKIKGWIDR-LGTAWVEGEITQWGG--SGGNVYGKLKDLDV 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I   +W     KI     +G   + + K   +       + +  +   G G LL  L
Sbjct: 66  DATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLERL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLF    K  +PF+P  I +IT       +D+L+     +P +R  +   
Sbjct: 126 ERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKDSDAEKDVLRNAQLHWPSVRFRVVHT 185

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD    E+  AI  L         P  D+I++ARGGG  ++L  F+DE +VR  A  
Sbjct: 186 AVQGDRAAGEVTRAIGVL------DEDPEVDVIVIARGGGDFQNLLVFSDEKLVRTAAAC 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  ADLRA TPT AA+  VP      S +    AR+   +   
Sbjct: 240 RTPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVPDVSEELSRVQQARARIGMRLTSQ 299

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++ +I+ +  L     L ++   +      L R           ++ R  +  + +  ++
Sbjct: 300 VRGEIDRIEQLRSRPVLASTSWIVDSRAEELGRYIARSAELAGRVVERGMQQTSELSRQL 359

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           ++    H + +    +        +          L  +     L        + I    
Sbjct: 360 RTLSPQHVLDRGYAIVQTADGSALRAPADAPDGTGLVLRLAAGALGATSTGPTDDIPSSA 419

Query: 418 THI 420
             +
Sbjct: 420 ARL 422



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 45/149 (30%)

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q      ++   +      + +      +   T   +      + + I R   +    +
Sbjct: 286 QQARARIGMRLTSQVRGEIDRIEQLRSRPVLASTSWIVDSRAEELGRYIARSAELAGRVV 345

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           +      S  +R L++ + ++ L RGY  +Q  + + +    +    T +++    G   
Sbjct: 346 ERGMQQTSELSRQLRTLSPQHVLDRGYAIVQTADGSALRAPADAPDGTGLVLRLAAGALG 405

Query: 496 AIVINKAPPKEQPTKKCQLHNNKREKQGT 524
           A              +         +  +
Sbjct: 406 ATSTGPTDDIPSSAARLPASPAPDARPAS 434


>gi|311898161|dbj|BAJ30569.1| putative exodeoxyribonuclease 7 large subunit [Kitasatospora setae
           KM-6054]
          Length = 408

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 10/301 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63
              S       V ++S  +   V+  L  V V G+I+       +G  + +L+D      
Sbjct: 2   ANTSSPEAPLPVGKVSALIGGWVDR-LGEVWVEGQIAQLNRRPGAGMVFLTLRDPERDVS 60

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +    ++    ++    +EG   +V  K   +       +    L   G G LL  LE+ 
Sbjct: 61  LTVTCFRQVFEQVADAVQEGARVIVRAKPEWYTARGTLSLRAAELRLVGLGELLARLEQL 120

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K++L  EGLF D  K P+PF+P  + ++T    A  RD+L+    R+P +R  +  V VQ
Sbjct: 121 KRRLFAEGLFEDARKKPLPFLPGCVGLVTGRGSAAERDVLENARRRWPAVRFEVRNVLVQ 180

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G +   ++  A+ +L+ L      P  ++I++ARGGGS+EDL  F+DE +VR +A +  P
Sbjct: 181 GPQSVGQVCAAVRELDAL------PEVEVIVVARGGGSVEDLLPFSDEELVRTVAAARTP 234

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L D+ AD RA TPT AA+  VP      + +  L  R    ++  ++ 
Sbjct: 235 VVSAIGHEPDQPLLDFVADFRASTPTDAAKRVVPDVGEELARVRQLRDRARRHVLNRVER 294

Query: 303 K 303
           +
Sbjct: 295 E 295



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
              ++       ++    + E+   + Q+  +  R++    + + A L  +R +      
Sbjct: 252 ADFRASTPTDAAKRVVPDVGEELARVRQLRDRARRHVLNRVERESAGLASVRSRPVLAAP 311

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +      +  L+ R   +L  ++    + +      + + +   TL+RGY  +Q  +
Sbjct: 312 AEALAARGAEVDALLDRARRVLGLRLDHAQSDLGHALARVVALSPLATLERGYAVLQKAD 371

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              +T     A    +      G     V   A
Sbjct: 372 GTVLTDPARAADGEALRARVAGGSFGVRVDGGA 404


>gi|118580288|ref|YP_901538.1| exodeoxyribonuclease VII [Pelobacter propionicus DSM 2379]
 gi|118502998|gb|ABK99480.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM
           2379]
          Length = 530

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/530 (19%), Positives = 202/530 (38%), Gaps = 49/530 (9%)

Query: 15  YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAI 67
           + +S ++  +  +++  +     V+ E+    G    G  Y  L +  +      +I   
Sbjct: 11  FPLSSITTRISELLQPAITKRFWVKAEV--MSGRERGGAFYCDLIETGANGKIAAKISCT 68

Query: 68  IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPSG-SGTLLT 118
           IW   L  I   F  +     L  G +     +  +       + +    PS   G +  
Sbjct: 69  IWSQELTSIRNLFKSKGMDLVLTDGTVVGFQCSLQYSPQYGISLRVIDADPSFALGEMEL 128

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIF 177
              +  ++L  EGLF    +  +P +P+ I +I+S   A   D +Q ++   F  ++ + 
Sbjct: 129 KKREIIERLQREGLFQPNKECFVPLLPQNIGLISSFGSAAYNDFIQTLTTSMFGFKIHMA 188

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              +QG++  K +  A+  L  L         ++I++ARGGGS  DL+  ++E + R IA
Sbjct: 189 DAMMQGEQTEKSVLRAMDALCKL-------GVELIVIARGGGSKTDLYFLDNEAVARKIA 241

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
             +IP+ + IGHE D ++ DY A+    TPT  AE  V     +Q  L      L  +  
Sbjct: 242 ACTIPVWTGIGHEIDTSVLDYVANKSFKTPTAVAEELVARFIQMQRQLEEASNTLQTVWA 301

Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
              K     L+  +  +     + L  +   L    ++L H +   +  ++       ++
Sbjct: 302 YRFKIDREYLDRAIIGIHQGPRKLLEVTVSNLREQAQDLRHLVSERLSTEHIQLESKRSQ 361

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414
           +KS   +  IQK  + +  K+Q+I   VK  L                 R   + ++   
Sbjct: 362 LKS-LPLAVIQKQIERLSSKKQNIGTQVKFALSGWTGTMSRLKGRFDKNRYIKRLQVESD 420

Query: 415 YLHTHIKKLITRIEFILS-------------------HKIKSCHTSVSITTRILQSFAYK 455
                 ++L++R    +                     +I     S++     +++   +
Sbjct: 421 AHDKSSQQLLSRFTAAVKLLTMQQWNRKERFRVEKVKQRIMVERKSLNDKMATIRATDPQ 480

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           N L+RG+  +   +   I    ++     I  +  DG   + V+ K    
Sbjct: 481 NALQRGFALVYRQDGQLIRSIHDINKSDTIRTHVVDGTVISEVVAKEAKA 530


>gi|302530084|ref|ZP_07282426.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. AA4]
 gi|302438979|gb|EFL10795.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. AA4]
          Length = 421

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 165/372 (44%), Gaps = 16/372 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +   +     + V  ++  +   +   L  V V G+++       +  A+ +L+D  + 
Sbjct: 2   SNDPATSAENPWPVRTVARKIGDWIHR-LGDVWVEGQVTQMNARPGTQTAFLTLRDPSAD 60

Query: 64  ID----AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +       +W   + ++     EG   ++  K + F G     +  + +   G G LL  
Sbjct: 61  VSMSVTCPMW--LVRELPTPLREGDRVVIHAKPSFFFGRGTLSLRADQIRAVGIGELLAR 118

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ +K L  EG+F+ + K PIPF+PK I +IT    A  RD+L     R+P +   +  
Sbjct: 119 IERLRKLLAAEGMFARERKRPIPFLPKGIGLITGRASAAERDVLANAQARWPHVLFKVLN 178

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG +   +I  A+  L+        P  D+I++ARGGGS+EDL  F+DE + RA+A 
Sbjct: 179 TAVQGSQAVPQILRALSILDK------DPDVDVIVIARGGGSVEDLLPFSDEALCRAVAA 232

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  PI+SAIGHE D  L D+ ADLR  TPT A++  VP      + +  +  R    +  
Sbjct: 233 AGTPIVSAIGHEPDTPLLDHVADLRCSTPTDASKRIVPDVREETARVRQMRDRGRRALHG 292

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   L  L     L +    +      ++R        +  ++ +      +   R
Sbjct: 293 WVDRETRLLTQLRSRPSLADPLGPIERRLSDVERHRERGRRAMLSLLAKDQAEVANARGR 352

Query: 357 IKSDFLIHNIQK 368
           + +      +++
Sbjct: 353 LAALGPAATMER 364



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 55/168 (32%), Gaps = 9/168 (5%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-- 412
             ++        ++    + E+   + Q+  +  R +      +  +L  LR +      
Sbjct: 254 ADLRCSTPTDASKRIVPDVREETARVRQMRDRGRRALHGWVDRETRLLTQLRSRPSLADP 313

Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I    + +++   R    +   +      V+     L +     T++RGY  +Q  D
Sbjct: 314 LGPIERRLSDVERHRERGRRAMLSLLAKDQAEVANARGRLAALGPAATMERGYAVVQFTD 373

Query: 468 TNN--NFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           +    + +     +    ++ +   DG  +A+  +  P    P     
Sbjct: 374 SAGNLHVLRSVSQIEDGAQLRVRVADGAVHAVAESVEPTTPVPEGDRP 421


>gi|227832770|ref|YP_002834477.1| exodeoxyribonuclease large subunit [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453786|gb|ACP32539.1| exodeoxyribonuclease large subunit [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 441

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +Q  +     + V +++  +K  +E  L  + V G+I+      +   +Y +L+D    
Sbjct: 29  VNQPANSAETPWPVGKVNDQVKGWIER-LGFLWVEGQITQLNMKPTWKLSYITLRDVEQE 87

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +        +       ++G   +V GK   + G   + + +  +   G G LL  +E
Sbjct: 88  KSVQLTCNTSLIRNAPSPLKDGDRVVVYGKPAFYAGRGSFSLWVTEIRHVGIGDLLARVE 147

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             ++KL +EGL     K P+P++PK I +IT       RD+L     R+P ++  +    
Sbjct: 148 MLRQKLRQEGLCDPSRKLPLPYLPKKIGLITGRGSHAERDVLSVAQDRWPAVQFNVINTA 207

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     ++ +A+  L+        P  D+II+ARGGGS+EDL  F++E + RA+A + 
Sbjct: 208 VQGATAVTQVIDALRTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAEAR 261

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  ADLRA TPT AA+  VP      + +    +R+   +   +
Sbjct: 262 TPVVSAIGHEPDHPVLDDVADLRAATPTDAAKRVVPSASKEYALISEARSRMAAALRGWV 321

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L ++     L +    ++  R  L+R    +   +   + R+      +  R+ 
Sbjct: 322 DRERRGLENIRSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVS 381

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 382 ALGPSATLER 391



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +       I      +++ +  I  ++SH++      V+     + +     TL+R
Sbjct: 332 RSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVSALGPSATLER 391

Query: 461 GYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQAN 495
           GY  +    +D +    +T        +++ I   DG   
Sbjct: 392 GYAIVQVLPRDGSGPEVVTSYTQSPPGSQLRIRVGDGSIT 431


>gi|289640708|ref|ZP_06472880.1| exodeoxyribonuclease VII, large subunit [Frankia symbiont of
           Datisca glomerata]
 gi|289509597|gb|EFD30524.1| exodeoxyribonuclease VII, large subunit [Frankia symbiont of
           Datisca glomerata]
          Length = 416

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            S       V  ++  +   + + L  V V G+++           + +L+D  +   + 
Sbjct: 4   TSTPEQPLPVRTVARAIGDWI-NRLGRVWVEGQLTEIVRRPGLATVFLTLRDPVADVSLR 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +   + +     +G   +V GK +  P      + +  + P G+G LL  LE+ + 
Sbjct: 63  LTCPRAVCDAVGSALTDGARVVVQGKPSFHPARGTLALAVTEIRPIGTGILLARLEQLRG 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K   PF+P+ + +IT    A  RD++     R+P +R++   V VQG 
Sbjct: 123 MLAAEGLFAASRKRRPPFLPRAVGLITGRASAAERDVVMNARRRWPAVRIVSREVAVQGP 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               +I +A      L+E    P  D+I++ARGGGS+EDL  F+DE +VRA+A ++ P++
Sbjct: 183 LAVGQIIDA------LRELDGVPEVDVIVIARGGGSLEDLLPFSDEALVRAVAAATTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+RA TPT AA+  VP      + +  L  R    + + +  + 
Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVAEQLALVTTLRGRARRSVEQRLDREE 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L  L     L    + L      +  L       +   + R  +   H + ++ +   
Sbjct: 297 RWLADLRGRPALAAPGRELDRHDEYVRALRSRGRRCVLHQLERADQELAHALAQLHALSP 356

Query: 363 IHNIQK 368
              + +
Sbjct: 357 AATLDR 362



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 44/145 (30%), Gaps = 3/145 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +    +   +    + V+Q L        +               +     +++ L +
Sbjct: 270 VAEQLALVTTLRGRARRSVEQRLDREERWLADLRGR--PALAAPGRELDRHDEYVRALRS 327

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTR 484
           R    + H+++     ++     L + +   TL RGY  ++   + + +           
Sbjct: 328 RGRRCVLHQLERADQELAHALAQLHALSPAATLDRGYALVRRVADGSIVRDPAQATPGDA 387

Query: 485 ILINFFDGQANAIVINKAPPKEQPT 509
           + +    G   A V +        T
Sbjct: 388 LTVRVAGGSFPATVDSPPAGARTQT 412


>gi|330465789|ref|YP_004403532.1| exodeoxyribonuclease vii, large subunit [Verrucosispora maris
           AB-18-032]
 gi|328808760|gb|AEB42932.1| exodeoxyribonuclease vii, large subunit [Verrucosispora maris
           AB-18-032]
          Length = 407

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66
           S     + V  +S  +   V + L  V V G+++       +   + +L+D  + +    
Sbjct: 9   SSSEEPWPVRVVSQKIAAWV-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPSAELSLTV 67

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
              +  L+       EG   +V  K   +       +  + +   G G LL  LEK KK 
Sbjct: 68  TTDRDVLDSGAPELREGARIVVHAKPEFYAARGTLSLRADEIRQVGLGELLARLEKLKKL 127

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF    K   PF+P+ + +IT    A  RD+L     R+P +      V VQG  
Sbjct: 128 LAAEGLFDRARKRRPPFLPQRVGLITGRASAAERDVLTNARRRWPAVEFRTVNVAVQGPG 187

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +I +A+  L       + P  D+IILARGGG IEDL  F+DE + RA+     P++S
Sbjct: 188 AVPQIIDALKVL------DSDPSVDVIILARGGGGIEDLLPFSDEALCRAVFACRTPVVS 241

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHETD  L DY AD+RA TPT AA+  VP        +     RL+  +  L+  + +
Sbjct: 242 AIGHETDAPLVDYVADIRASTPTDAAKRVVPDLAEEIRLINQARHRLHRAVHNLVDRETH 301

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            +++L     L      +      L  L +  E NL   +        H + R+++    
Sbjct: 302 RIDALRSRPVLARPQVMVEQRAADLAALRQRAERNLRHRLAAADDDLRHTLARLRALSPA 361

Query: 364 HNIQK 368
             + +
Sbjct: 362 ATLDR 366



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 2/135 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  + I + +  + + V   +       +        +  + +  +      +  L  
Sbjct: 274 LAEEIRLINQARHRLHRAVHNLVDR--ETHRIDALRSRPVLARPQVMVEQRAADLAALRQ 331

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R E  L H++ +    +  T   L++ +   TL RGY  +Q  + + +     +A    +
Sbjct: 332 RAERNLRHRLAAADDDLRHTLARLRALSPAATLDRGYAIVQRADGHVVRAADEVAKGDAL 391

Query: 486 LINFFDGQANAIVIN 500
            +   DG     V  
Sbjct: 392 RVRLADGDLAVTVTG 406


>gi|148273413|ref|YP_001222974.1| exodeoxyribonuclease VII large subunit [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|166232351|sp|A5CT74|EX7L_CLAM3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|147831343|emb|CAN02299.1| xseA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 438

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P +   ++D P + VS LS  +K  ++  L    V GEI+ + G  S G+ Y  LKD   
Sbjct: 10  PAADAPTVDAP-WPVSVLSGKIKGWIDR-LGTAWVEGEITQWGG--SGGNVYGKLKDLDV 65

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I   +W     KI     +G   + + K   +       + +  +   G G LL  L
Sbjct: 66  DATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLERL 125

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLF    K  +PF+P  I +IT       +D+L+    R+P +R  +   
Sbjct: 126 ERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKDSDAEKDVLRNAQLRWPSVRFRVVHT 185

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD    E+  AI  L         P  D+I++ARGGG  ++L  F+DE +VR  A  
Sbjct: 186 AVQGDRAAGEVTRAIGVL------DEDPEVDVIVIARGGGDFQNLLVFSDEKLVRTAAAC 239

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  ADLRA TPT AA+  VP      S +    AR+   +   
Sbjct: 240 RTPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVPDVSEELSRVQQARARIGMRLTSQ 299

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++ +I+ +  L     L ++   +      L R           ++ R  +  + +  ++
Sbjct: 300 VRGEIDRIEQLRSRPVLSSTAWIVDSRAEELGRYIARSAELAGRVVERGMQQTSELSRQL 359

Query: 358 KSDFLIHNIQK 368
           ++    H + +
Sbjct: 360 RTLSPQHVLDR 370



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 36/107 (33%)

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q      ++   +      + +      +   T   +      + + I R   +    +
Sbjct: 286 QQARARIGMRLTSQVRGEIDRIEQLRSRPVLSSTAWIVDSRAEELGRYIARSAELAGRVV 345

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
           +      S  +R L++ + ++ L RGY  +Q  + + +    +    
Sbjct: 346 ERGMQQTSELSRQLRTLSPQHVLDRGYAIVQTADGSALRAPADAPDG 392


>gi|303237763|ref|ZP_07324322.1| exodeoxyribonuclease VII, large subunit [Prevotella disiens
           FB035-09AN]
 gi|302482049|gb|EFL45085.1| exodeoxyribonuclease VII, large subunit [Prevotella disiens
           FB035-09AN]
          Length = 445

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/504 (18%), Positives = 182/504 (36%), Gaps = 96/504 (19%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDA 66
            ++ EL+  +  +++  +     V+ E+S      S GH +  L +         +R  A
Sbjct: 19  LTLYELNSMVAELIDRAMPQSYWVQAEVSE--ARESGGHLFLELIEKQERTNTPIARASA 76

Query: 67  IIWKGTLNKI--EFLPEEGIEFLVIGKITT-----FPGSSKYQIIIESLIPSG-SGTLLT 118
             W+     I   F  + G++     ++       F     +  I++ + P    G +  
Sbjct: 77  KCWRSQWALIGANFERKTGVKVRAGLQLMVQVHAQFHPQYGFSWIVDDINPEFTMGDMAR 136

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175
             ++   +L  EG+F  Q +  IP   K IAV++S + A   D   ++      F   V 
Sbjct: 137 KRQEIINQLKAEGVFDLQKELNIPLFAKRIAVVSSASAAGYGDFCNQLEHNEYGFCFEVE 196

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +F   +QG+   K I  A+  +N  +        D +++ RGGG+  DL  F+   +   
Sbjct: 197 LFAAAMQGELVEKSIIEALNLINEREVD-----FDCVVIIRGGGATADLSGFDTLALAEN 251

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +AN  +PII+ IGHE D ++ D  A+ R  TPT AA   +                    
Sbjct: 252 VANFPLPIITGIGHERDESILDMVANTRVKTPTAAAAFLIEH------------------ 293

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
                                    L+ + YR+++   ++   +E  +  +  H   +  
Sbjct: 294 -------------------------LANTLYRIEQAQMKIHRAVERKLQEEKLHLQRLST 328

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            I   F    +  NR++                             LH + ++    +  
Sbjct: 329 HIPVLF---AMVHNREN-----------------------ARLDDYLHAIIQRIGLHLQR 362

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
              +I  L  +++  +  KI      + + ++ + S   +  L+ GY+     N + +  
Sbjct: 363 NRMNIATLSEKLQPNVERKITHERHRLQLLSQRIDSVNPERLLRLGYSLTY-KNGHIVRN 421

Query: 476 KRNLATKTRILINFFDGQANAIVI 499
              L+    I+     G   +IV 
Sbjct: 422 ANELSKGDEIVTRMEMGSVKSIVK 445


>gi|284989584|ref|YP_003408138.1| exodeoxyribonuclease VII large subunit [Geodermatophilus obscurus
           DSM 43160]
 gi|284062829|gb|ADB73767.1| exodeoxyribonuclease VII, large subunit [Geodermatophilus obscurus
           DSM 43160]
          Length = 406

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 13/367 (3%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RI 64
             S     + V  ++  +   +   L  V V G+++           + +L+D  +   +
Sbjct: 3   SPSTPEAPWPVRTVARKVAEWI-GRLGEVWVEGQVAQL-SRRGGATVFLTLRDPAADLSV 60

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
                +    +      EG   +V  +   +     + +    +   G G LL  +E+ +
Sbjct: 61  PVTCSRDVAGRPGLELTEGARVIVRARPDYYIARGSFSLRATEIRAVGLGELLARIERIR 120

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           + L  EGLF    K P+PF P ++ V+T    A  RD+L     R+P +R  +    VQG
Sbjct: 121 RLLAAEGLFDAARKRPLPFAPAVVGVVTGRDSAAERDVLVTARRRWPAVRFAVHHSLVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                 +   + +L+        P  ++I++ARGGGS+EDL  F+DE +VRAIA    P+
Sbjct: 181 PSAASSVIEGLQRLDR------DPEVEVIVVARGGGSVEDLLPFSDEGLVRAIAACRTPV 234

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ++A+GHETD TL D+AAD+RA TPT AA   VP     +  +  L AR  +++   ++ +
Sbjct: 235 VTAVGHETDTTLVDHAADVRAATPTDAAHRVVPEIGEQRRLVDGLRARARHLVGARLEQQ 294

Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              L S+     L +  + L      +++L      +L   +    R   H   R+ +  
Sbjct: 295 ERWLESVRSRPVLADPQRLLHGRADDVEQLRTRARRSLTHRLEGAERDLEHARARVAALS 354

Query: 362 LIHNIQK 368
               +++
Sbjct: 355 PAATLER 361



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 50/133 (37%), Gaps = 2/133 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I + R+ +   +     +V   L       +   +    +    +  +      +++L T
Sbjct: 269 IGEQRRLVDGLRARARHLVGARLEQQERWLESVRSR--PVLADPQRLLHGRADDVEQLRT 326

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R    L+H+++     +      + + +   TL+RGY  +Q  + + + +   +A   R+
Sbjct: 327 RARRSLTHRLEGAERDLEHARARVAALSPAATLERGYAVVQRADGSLVREPGEVADDERL 386

Query: 486 LINFFDGQANAIV 498
            +    G+    V
Sbjct: 387 SVRVAGGRLPVRV 399


>gi|144897277|emb|CAM74141.1| exodeoxyribonuclease VII, large subunit [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 260

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 100/207 (48%), Positives = 138/207 (66%), Gaps = 3/207 (1%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           MN    + + + PE+SV+ELS  LK  VE   +HV VRGEISG++  HSSGH YF+LKD 
Sbjct: 5   MNE--PRPASNVPEFSVAELSGALKRTVEETFAHVRVRGEISGFK-RHSSGHLYFALKDA 61

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +DA+ W+G   K+   PE+G+E +  G++TT+PG SKYQ+++E +  +G G LL  L
Sbjct: 62  EAVLDAVCWRGQAAKLGINPEDGMEVIATGRLTTYPGRSKYQMVVERMELAGQGALLKLL 121

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180
           E R++KL  EGLF    K PIPF+P+II ++TSPTGAVIRDIL R++ RFP RV+++PV 
Sbjct: 122 EDRRRKLAAEGLFDQGRKRPIPFLPEIIGIVTSPTGAVIRDILHRLADRFPRRVLLWPVA 181

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCP 207
           VQG+        A  +L  L   R  P
Sbjct: 182 VQGERRRPTGGFAPRRLQHLAGQRRAP 208


>gi|148241467|ref|YP_001226624.1| exonuclease VII large subunit [Synechococcus sp. RCC307]
 gi|147849777|emb|CAK27271.1| Exonuclease VII large subunit [Synechococcus sp. RCC307]
          Length = 384

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 28/404 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           ++ P YSVSEL+  +  ++E        V G +   + +   GH +FSL D  + I A+ 
Sbjct: 1   MELPAYSVSELNEAIGVLLERGFAPRFLVDGAV--VKPVLKKGHLWFSLSDGDASIQAVA 58

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           W  T+ ++ F P +G    V+GK+  +   +   +    + PS   T+L   E+ K++L 
Sbjct: 59  WASTVARLSFRPNDGDGVRVVGKLNFWGARASLSVQALDIRPS-LSTVLRRFEQVKQQLE 117

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
            EGL     +  +P  P  IA++TS   + + D+L+    R+P   + + P+ VQGD   
Sbjct: 118 SEGLLDPALRRQLPQRPSCIAILTSVPSSALADLLRTAKQRWPACNLRVVPIPVQGDVEK 177

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           +  A      + L+        + ++LARGGGS EDL  F+ E + RA+    +P++S I
Sbjct: 178 RICAV----FDQLETQWQRLGIEAVVLARGGGSREDLSVFDGEDLARALLRCPVPVVSGI 233

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHE D T+AD AAD RA TPT A    +P ++  Q  L        + I   ++ +    
Sbjct: 234 GHEDDVTIADLAADYRAATPTAAMVALLPDRQQEQQLLEQRGRHWRSSIQNRLEQE---- 289

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                 L   D  L   + R           L+  + R+    +     + +      +Q
Sbjct: 290 ------LRQWDPELRQDQRRA---------LLQRNLERRQWQLHSQRQLLAALSPQRLLQ 334

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
           +    +   +  + +          +E +    +L +  +  + 
Sbjct: 335 RGYCLLRSSEGQLLRNGSTLSAGDAVEAQLHQGVLSLTVQTWQP 378



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 11/103 (10%), Positives = 37/103 (35%), Gaps = 2/103 (1%)

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
           ++ + +  +      +++   R   +L   ++     +    ++L + + +  L+RGY  
Sbjct: 282 IQNRLEQELRQWDPELRQDQRR--ALLQRNLERRQWQLHSQRQLLAALSPQRLLQRGYCL 339

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           ++ +    +     L+    +      G  +  V    P   +
Sbjct: 340 LRSSEGQLLRNGSTLSAGDAVEAQLHQGVLSLTVQTWQPETSE 382


>gi|118471910|ref|YP_889472.1| exodeoxyribonuclease VII large subunit [Mycobacterium smegmatis
           str. MC2 155]
 gi|118173197|gb|ABK74093.1| exodeoxyribonuclease VII, large subunit [Mycobacterium smegmatis
           str. MC2 155]
          Length = 404

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 12/356 (3%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI--IWKGTLNK 75
             ++  +   ++  L  V V G+++  +    S   +  L+D  + +       +  +  
Sbjct: 2   RAVATRVAKWIDR-LGVVWVEGQLTELKIRPDSKTVFMVLRDPAADMSLTLTCPRDLVRN 60

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 EG + ++ GK   + G   + + +  +   G G LL  +E+ ++ L  EGLF  
Sbjct: 61  APVRLTEGTQVIICGKPNFYTGRGTFSLRVSEIRAVGIGELLARIERLRRLLDAEGLFDP 120

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
           + K  IPF+P  I +IT    A  RD+    S R+P +R  I    VQG     +I +A+
Sbjct: 121 RLKRSIPFLPNTIGLITGRASAAERDVTTVASSRWPAVRFAIRNTIVQGPNAVPQIVDAL 180

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
             L+        P  D+I+LARGGGS+EDL  F+DE + RAI+    P++SAIGHE D  
Sbjct: 181 AALDA------DPEVDVIVLARGGGSVEDLLPFSDETLCRAISACRTPVVSAIGHEPDNP 234

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313
           + D  ADLRA TPT AA+  VP     Q+ + +L  R    +   +  + + L+ L    
Sbjct: 235 VCDLVADLRAATPTDAAKRIVPDAAAEQALISDLHRRSARALRNWVHREQHHLDQLRSRP 294

Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L      ++     + R     + ++  +I  +     H+  R+ +      + +
Sbjct: 295 VLAQPLAAITARGDEIHRARATAQRDITRLIAGETDTIGHLSARLTALGPAATLAR 350



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 9/167 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       ++       +Q  I  + ++  R +      +   L  LR      
Sbjct: 238 LVADLRAATPTDAAKRIVPDAAAEQALISDLHRRSARALRNWVHREQHHLDQLRSRPVLA 297

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           Q    I      I +     +  ++  I     ++   +  L +     TL RGY  +Q 
Sbjct: 298 QPLAAITARGDEIHRARATAQRDITRLIAGETDTIGHLSARLTALGPAATLARGYAVVQA 357

Query: 468 --TNN--NFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
                    +    +    TR+ +   DG   A        +   + 
Sbjct: 358 VPDTGPPTVLRSTDDAPAGTRLRVRVSDGVVTARSEGTEDDETGSST 404


>gi|239929159|ref|ZP_04686112.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis
           ATCC 14672]
          Length = 387

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 166/368 (45%), Gaps = 12/368 (3%)

Query: 21  SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA--IIWKGTLNKIEF 78
           S  +   ++  L  V V G+I+       +G  + +L+D    I      ++   + +  
Sbjct: 2   SRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVGVTCYRQVFDAVAD 60

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138
           +  EG   +V  K   +    +  +    + P G G LL  LE+ KK L  EGLF+ + K
Sbjct: 61  VVSEGARVVVHCKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKKSLAREGLFAPERK 120

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQL 197
            P+PF+P++I ++     A  RD+L+    R+P +R  +  V VQG     ++  A+ +L
Sbjct: 121 KPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGVHAVPQVVQAVKEL 180

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
           + L         D+II+ARGGGS+EDL  F+DE +VRA+A    P++SAIGHE D  L D
Sbjct: 181 DAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVVSAIGHEPDNPLLD 234

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315
           + ADLRA TPT AA+  VP        +  L  R    +  L+  +   L   L    L 
Sbjct: 235 HVADLRASTPTDAAKKVVPDVGEEHERVRMLRDRARRCVRALVDREERGLAQALARPSLQ 294

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           +  + +      +  L      +L   + R     +H   R+ +      +++    +  
Sbjct: 295 DPHRMVDARAEEVTALLERGRRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQR 354

Query: 376 KQQHIEQI 383
                 + 
Sbjct: 355 ADGQAVRA 362



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 2/132 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + +   +    + V+  +        + +A      +     +      +  L+ R 
Sbjct: 257 EEHERVRMLRDRARRCVRALVDREERGLAQALAR--PSLQDPHRMVDARAEEVTALLERG 314

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L H++    + +S T   + + +   TLKRGY  +Q  +   +     +     +  
Sbjct: 315 RRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGQAVRAPGEVEAGEALRA 374

Query: 488 NFFDGQANAIVI 499
              +G+    V 
Sbjct: 375 RVSEGEFTVRVD 386


>gi|261337704|ref|ZP_05965588.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium gallicum
           DSM 20093]
 gi|270277148|gb|EFA23002.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium gallicum
           DSM 20093]
          Length = 446

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-- 60
           P   +++     + VS LS      VE     V V G+I       +S   Y +L+D+  
Sbjct: 38  PALARDTTAENPWPVSLLSQKYHTAVER-WPAVWVEGQIIEINTRRAS-SVYITLRDSTQ 95

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    + G   ++    ++G   ++ GK   +   ++  +  + +   G+G L   +
Sbjct: 96  DVSLSVNGF-GMFAQMARNFKQGDRVVIHGKADLWVKQTRLSLRGDDIRRIGAGDLKERI 154

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++KL  EGLF    K  +P  P+ I +I +P      D++  ++ R+P +   I   
Sbjct: 155 EELRRKLKGEGLFDQDRKVALPEFPRTIGLICAPQARAEGDVITNVNLRWPTVNFHIVHT 214

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP E+ +AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  
Sbjct: 215 HVQGAQCPPEVIDAIRQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAEC 268

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE DWTL D AADLRA TPT AA+  VP        + +  A++   +   
Sbjct: 269 VTPIVSAIGHEDDWTLIDLAADLRASTPTDAAKRVVPDVREQTQLVSSAMAQMTMRLTAR 328

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +   +   +    L      L      LD   R +   L  +   +          +
Sbjct: 329 LDNETRLVEGYVNRPSLTRPQTILEPHERFLDEATRRMRIALTRLADEEQLVVERNEATL 388

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 389 RALSPQSTLDR 399



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 15/169 (8%), Positives = 46/169 (27%), Gaps = 7/169 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E Q  +       +      + +    L 
Sbjct: 278 HEDDWTLIDLAADLRASTPTDAAKRVVPDVRE-QTQLVSSAMAQMTMRLTARLDNETRLV 336

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     + +  +      + +   R+   L+         V      L++ + ++T
Sbjct: 337 EGYVNRPSLTRPQTILEPHERFLDEATRRMRIALTRLADEEQLVVERNEATLRALSPQST 396

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           L RGY  +   + + +    ++     + I    G   A        + 
Sbjct: 397 LDRGYAVVMTADGHVVDSASHVTQGDELTITLKRGAVVAQAQTVVTEER 445


>gi|332886347|gb|EGK06591.1| exodeoxyribonuclease VII, large subunit [Dysgonomonas mossii DSM
           22836]
          Length = 455

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 97/510 (19%), Positives = 192/510 (37%), Gaps = 75/510 (14%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH------- 61
           ++ P  S+ EL+  +K +++  L  V  +R E S  R    +GH Y    +         
Sbjct: 1   MNRPAISLYELNNLIKGVLKETLPEVFWIRAETSDVRVN-QNGHCYLEFIEKDINGRALI 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   +IW  T   ++   E         G++ LV   +        + + +  + P+  
Sbjct: 60  AKARGMIWANTFYILKAYFENTTKQTFSSGLKVLVQVSVEFHELYG-FTLTVHDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G          K+L E+G+ S   +  +P     IA+I+SPT A   D L +++     
Sbjct: 119 LGDQALNRAAIIKQLEEDGVLSLNKELELPIPTNKIAIISSPTAAGYEDFLDQLANNPYG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG+     I +A+ ++   ++       D +++ RGGG+  DL  F+ 
Sbjct: 179 FIFYTKLFPALMQGERTESSIISALERIYEYQDC-----FDAVVIIRGGGATSDLSSFDS 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
            ++  + A   +P+I+ IGHE D T+ D  A  R  TPT  AE  +         L  + 
Sbjct: 234 YLLAASCAQFPLPVITGIGHERDDTVLDIVAHTRMKTPTAVAEFLIGNIAETAMELDEMA 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
             + +++ +                      L     RL     +    L+  +  +   
Sbjct: 294 HDIVSVVTQR---------------------LQDEAVRLSVFETKNTFLLKAWLKEQDTI 332

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +   N +    L  + ++N   +   Q                          +L  ++
Sbjct: 333 LSSAKNVLIRG-LQSSHKENHSKLSSFQ-------------------------DILIRES 366

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           +        ++      ++ +   K K  +T + +  + L   + +N LK+GYT     +
Sbjct: 367 QQLNKESINNLTVFENTLKRVALQKFKDENTQLDMFEKHLLLASPENILKKGYTLTM-KD 425

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499
              I Q   +    ++   F DG+ ++IV 
Sbjct: 426 GKVIKQSSAVKKGDKLTTVFADGKLDSIVK 455


>gi|271969673|ref|YP_003343869.1| exodeoxyribonuclease VII [Streptosporangium roseum DSM 43021]
 gi|270512848|gb|ACZ91126.1| Exodeoxyribonuclease VII [Streptosporangium roseum DSM 43021]
          Length = 402

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 14/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              +       V  +   +   +   L  V V G+I+        G  + +L+D  + + 
Sbjct: 2   SSKTTPEQPLPVRTVLQMVGGWI-GKLGTVWVEGQITELTAR--GGTVFLTLRDPVANVS 58

Query: 66  A--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           A     +G        P +G   ++  K   +     +      + P G G LL  LE+ 
Sbjct: 59  ARVTCPRGVYEATVPRPVDGARVVMHLKPDFWVNKGSFAFTALEMRPVGVGELLARLERL 118

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           ++ L  EGLF    K  +PF+P  I +I     A  RD+L+    R+P +R  + PV VQ
Sbjct: 119 RQVLAAEGLFGVDRKRRLPFLPGTIGLICGRDSAAERDVLENSRRRWPAVRFKVEPVAVQ 178

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G     E+  A+ + +   E       D+I++ARGGGS+EDL  F+DE +VRA+A    P
Sbjct: 179 GPYAVTEVGEALRKFDADGE------VDVIVIARGGGSMEDLLPFSDEALVRAVAACRTP 232

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           ++SAIGHE D  L D  AD+RA TPT AA+  VP      + +  L  R   +    ++ 
Sbjct: 233 VVSAIGHEQDNPLLDLVADVRASTPTDAAKKVVPDVGEQLTLIRQLRDRGRRVAGGWLER 292

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   L ++     L +  + +     + ++L      +L   + R      H+  R+ S 
Sbjct: 293 ETTWLAAVRSRPSLADPVREIERRAEQAEQLRDRARRSLTGSLDRAQDSLEHLRARLVSL 352

Query: 361 FLIHNIQK 368
                +++
Sbjct: 353 SPAATLER 360



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 5/159 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
             +      ++  +++       +K    + E+   I Q+  +  R      + +   L 
Sbjct: 239 HEQDNPLLDLVADVRASTPTDAAKKVVPDVGEQLTLIRQLRDRGRRVAGGWLERETTWLA 298

Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +R +         I       ++L  R    L+  +     S+      L S +   TL
Sbjct: 299 AVRSRPSLADPVREIERRAEQAEQLRDRARRSLTGSLDRAQDSLEHLRARLVSLSPAATL 358

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           +RGY  +Q    + + +  ++A    + I F D +    
Sbjct: 359 ERGYAIVQRPTGDVVRRAGDVAPGDELTIRFPDDRVTVR 397


>gi|315501921|ref|YP_004080808.1| exodeoxyribonuclease vii, large subunit [Micromonospora sp. L5]
 gi|315408540|gb|ADU06657.1| exodeoxyribonuclease VII, large subunit [Micromonospora sp. L5]
          Length = 424

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
              S   S     + V  +S  +   + + L  V V G+++       +   + +L+D  
Sbjct: 20  QSRSDGRSTAEEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPS 78

Query: 62  SRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +       +  L+       EG   ++  K   +       +  + +   G G LL  
Sbjct: 79  ADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLAR 138

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           LEK KK L  EGLF    K  +PF+P  + +IT    A  RD+L     R+P +      
Sbjct: 139 LEKLKKLLAAEGLFDRSRKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVDFRTIN 198

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     +I  A+  L+        P  D+I++ARGGG IEDL  F+DE + RA+  
Sbjct: 199 VAVQGPSAVPDIVGALKVLDA------DPAVDVIVIARGGGGIEDLLPFSDEALCRAVFA 252

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              P++SAIGHETD  L DY AD+RA TPT AA+  VP        +    +RL   +  
Sbjct: 253 CRTPVVSAIGHETDAPLLDYVADVRASTPTDAAKRIVPDLTEETRLIGQARSRLERAVRH 312

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
           L+  + + ++ L     L      +      +  L      +LE  +        H + R
Sbjct: 313 LVDREQHRIDLLRSRPVLARPQVMVEQRAVDVSALRDRAGRSLEHRLRGATDDLRHTLAR 372

Query: 357 IKSDFLIHNIQK 368
           +++      +++
Sbjct: 373 LRALSPAATLER 384



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 53/135 (39%), Gaps = 2/135 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  + I + +  +E+ V+  +     + +  +     +  + +  +      +  L  
Sbjct: 292 LTEETRLIGQARSRLERAVRHLVDR--EQHRIDLLRSRPVLARPQVMVEQRAVDVSALRD 349

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R    L H+++     +  T   L++ +   TL+RGY  +Q  + + +     +A    +
Sbjct: 350 RAGRSLEHRLRGATDDLRHTLARLRALSPAATLERGYAIVQRADGHVVRAASEVAKGDPL 409

Query: 486 LINFFDGQANAIVIN 500
            +   +G+  A V  
Sbjct: 410 RVRLAEGELTATVDG 424


>gi|183602102|ref|ZP_02963470.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219683014|ref|YP_002469397.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|241191334|ref|YP_002968728.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196740|ref|YP_002970295.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183218595|gb|EDT89238.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219620664|gb|ACL28821.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|240249726|gb|ACS46666.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251294|gb|ACS48233.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289177459|gb|ADC84705.1| Exodeoxyribonuclease VII large subunit [Bifidobacterium animalis
           subsp. lactis BB-12]
 gi|295794327|gb|ADG33862.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 432

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 105/378 (27%), Positives = 170/378 (44%), Gaps = 12/378 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS +S      VE     V + G+I        SG AY +L+DN  
Sbjct: 27  PRMAAQTTAENPWPVSMVSQKFHSAVER-WPAVWMEGQIIEINTR-RSGSAYLTLRDNDQ 84

Query: 63  RID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
            +  +++  G   ++    ++G   +V GK   +  S++  +  + +   G+G L   + 
Sbjct: 85  DVSMSVLGFGAFAQMARDYKQGDRVVVHGKADLYVKSTRLSLRADMIKRVGAGNLQEQIN 144

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + + +L  EGLF +  K  +P  PK I +I +P      D++  ++ R+P +R  I    
Sbjct: 145 QLRMRLKGEGLFDESRKVALPEFPKNIGLICAPQARAEGDVVMNVNLRWPGVRFTIVHAH 204

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG++CP +I +AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  +
Sbjct: 205 VQGEQCPPDIVSAIQQLDA------DPNVDVIIVARGGGSFEDLMGFSDERVVRATAACA 258

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            PIISAIGHE DWTL D AAD+RA TPT AA+  VP     Q  +     R+   I    
Sbjct: 259 TPIISAIGHEDDWTLIDLAADVRASTPTDAAKRVVPDVREQQQLITEGINRMRTFIANRA 318

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   +        L      L      +      + + L  I+  +      +   ++
Sbjct: 319 GNEERLVEGYANRPSLTQPLTMLIPHERDIADAVSAMRNGLRRIVDEEQMQVERLAATLR 378

Query: 359 SDFLIHNIQKNRQHILEK 376
           +      + +    +   
Sbjct: 379 ALSPQSTLDRGYAVLQNA 396



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 7/160 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E QQ +       +R     +      L 
Sbjct: 267 HEDDWTLIDLAADVRASTPTDAAKRVVPDVRE-QQQLITEGINRMRTFIANRAGNEERLV 325

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     Q    +      I   ++ +   L   +      V      L++ + ++T
Sbjct: 326 EGYANRPSLTQPLTMLIPHERDIADAVSAMRNGLRRIVDEEQMQVERLAATLRALSPQST 385

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           L RGY  +Q+ +   I     +     + +    G+  + 
Sbjct: 386 LDRGYAVLQNADGAIIDDASQVQVGDELTLTLRRGKVVSQ 425


>gi|329946085|ref|ZP_08293721.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328527867|gb|EGF54855.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 450

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 16/369 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66
           +     + +  LS  +   V + +S V V G+I        +G A+ +L+D  +   +  
Sbjct: 39  TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQIIQLNRRPGAGMAFLTLRDTDADVSMSV 97

Query: 67  IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I+   L     +      EG   +V  K T +      Q+  + + P G G LL  +E+
Sbjct: 98  AIYARVLDAVLARTGAELSEGARVVVRAKPTFWTKRGSLQLQADDIRPVGVGDLLARIEQ 157

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            ++ L  EGLF  + K P+PF+P  + ++         D+L     R+P L   +  V V
Sbjct: 158 LRRILAAEGLFDAERKRPLPFLPHKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 217

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     E+  AI       E     + D+I++ARGGG++EDL  F+DE +VRA A    
Sbjct: 218 QGARAVGEVTRAIQ------ELDADAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 271

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHETD  L D  AD RA TPT AA   VP        L +   RL  ++   + 
Sbjct: 272 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRTVLASRLD 331

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L+ L     + +    +      L +    +   +   +            R+ +
Sbjct: 332 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVGHRLSLAAADLRADHARLTA 391

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 392 LSPQGVLDR 400



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 43/136 (31%), Gaps = 2/136 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ +  ++    R    +          +     + +      + +   R+   + 
Sbjct: 315 LDSARERLRTVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVG 372

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           H++      +      L + + +  L RGYT ++      IT   ++     I      G
Sbjct: 373 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAHG 432

Query: 493 QANAIVINKAPPKEQP 508
           +  A V+    P+   
Sbjct: 433 RLVAQVVGATRPRPAN 448


>gi|229496822|ref|ZP_04390531.1| exodeoxyribonuclease VII, large subunit [Porphyromonas endodontalis
           ATCC 35406]
 gi|229316233|gb|EEN82157.1| exodeoxyribonuclease VII, large subunit [Porphyromonas endodontalis
           ATCC 35406]
          Length = 478

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 100/528 (18%), Positives = 194/528 (36%), Gaps = 74/528 (14%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------ 61
            +    +S+ EL+  ++   E N      V  E SG +     GH YF L +        
Sbjct: 4   PIPMKVFSLHELNSSIRRAFEQNFGGRFWVTAETSGIKSPPQGGHFYFELLEKGEREGQI 63

Query: 62  -SRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112
            +R  A++W+ ++  +    E         G++  ++  +        Y + +  L P+ 
Sbjct: 64  LARSRAVMWRASVGSLLTKFESATGQTFTNGLQVQLLVGVHFHEQFGLY-LDVYDLDPTF 122

Query: 113 -SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---C 168
             G +     +  ++L  EGL   Q    +    + IAVI+S + A   D    I     
Sbjct: 123 TLGDMARKRRETLERLRREGLLDCQKALTLGRPLRHIAVISSASAAGWGDFYSHIQAARE 182

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
           ++P  + ++P  +QG+     I +A+ ++      ++    D ++L RGGG+  DL  F+
Sbjct: 183 QWPFHLQLYPALMQGEGTTTSILSALREI-----AQSGIAYDCVVLIRGGGAEIDLMAFD 237

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
              +  AIA   +PII  IGHE D ++AD  A     TPT  AE  +  +E   + L  L
Sbjct: 238 SYELCAAIARYPLPIIVGIGHERDTSVADRVAHHSLKTPTAVAEFLLNSREREWTLLRKL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             RL   ++ +  Y                         L RL   L   ++    +++ 
Sbjct: 298 SERLQRSVVLMQDY---------------------HLVLLQRLVHHLPIAIKESTQQEFF 336

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                   ++   L   + + RQ I      ++  +    + +   +         L+  
Sbjct: 337 KLQRQEATLQRTAL-MLLAQERQRIEHCSYLLKATMP---KLLLSYQSVLEQEQQHLQRV 392

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
               +      ++ L                       R++Q  + + TLKRGY+ ++  
Sbjct: 393 LPLILEKKKESLEHL----------------------ARLVQLLSPRQTLKRGYSIVRKA 430

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
           + + +   + L     + I  ++G+  A V +   P           +
Sbjct: 431 DKSIL-SSQQLTRGDTLEIFLYEGRVGAQVSSVELPPSDSNDPENSTS 477


>gi|15828045|ref|NP_302308.1| exodeoxyribonuclease VII large subunit [Mycobacterium leprae TN]
 gi|221230522|ref|YP_002503938.1| exodeoxyribonuclease VII large subunit [Mycobacterium leprae
           Br4923]
 gi|14194740|sp|Q9X783|EX7L_MYCLE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|4539096|emb|CAB39814.1| putative exodeoxyribonuclease large subunit [Mycobacterium leprae]
 gi|13093598|emb|CAC30895.1| exonuclease VII large subunit [Mycobacterium leprae]
 gi|219933629|emb|CAR72037.1| exonuclease VII large subunit [Mycobacterium leprae Br4923]
          Length = 428

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            S + +     + V  ++  +   ++  L  V V G+++      ++   +  L+D  + 
Sbjct: 14  ASSQVNSAENPFPVRAVALRIAGWIDK-LGTVWVEGQLAQITMRPNAKTVFMVLRDPAAD 72

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           I       +  + +      EGI+ +V GK + + G   + + +  +   G G LL  ++
Sbjct: 73  ISLIVTCSRDFVLRAPVKLAEGIQVVVCGKPSFYIGRGTFSLRLSDIRAVGIGELLVRID 132

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K PIPF+P +I +IT    A  RD+    S R+P  R  I    
Sbjct: 133 RLRRLLDSEGLFDPRLKRPIPFLPNMIGIITGRASAAERDVTTVASARWPAARFAIRNTA 192

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     +I  A      L+E       ++I++ARGGGS+EDL  F+DE + RAIA   
Sbjct: 193 VQGPNAVSQIVEA------LRELDRNVDVEVIVVARGGGSVEDLLTFSDETLCRAIAACR 246

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P+ISA+GHE D  L D  ADLRA TPT AA+  VP     Q  + +L+ R    +   +
Sbjct: 247 TPVISAVGHEPDNPLCDLVADLRAATPTDAAKKVVPDAAVEQRLIEDLQRRSAQALRNWV 306

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +  TL  L     L    +TL+     + R    +   +  ++  +     H+  ++ 
Sbjct: 307 SREQRTLVQLRSRPVLAEPLRTLTTRSEEIHRAQSAIRREIIRLVTTETERVGHLATQLA 366

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 367 TLGPAATLAR 376



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 13/166 (7%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K       +Q+ IE + ++  + +      +   L  LR +    
Sbjct: 264 LVADLRAATPTDAAKKVVPDAAVEQRLIEDLQRRSAQALRNWVSREQRTLVQLRSRPVLA 323

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      I +  + I   +   + +    V      L +     TL RGY  +Q 
Sbjct: 324 EPLRTLTTRSEEIHRAQSAIRREIIRLVTTETERVGHLATQLATLGPAATLARGYAIVQA 383

Query: 468 -TNNN------FITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
             +         +    +  T TR+ +   DG   A V        
Sbjct: 384 LEDGTQTVTAAVLRSVDDAPTGTRLRVRVSDGAIVA-VSEGRADGP 428


>gi|229819597|ref|YP_002881123.1| exodeoxyribonuclease VII, large subunit [Beutenbergia cavernae DSM
           12333]
 gi|229565510|gb|ACQ79361.1| exodeoxyribonuclease VII, large subunit [Beutenbergia cavernae DSM
           12333]
          Length = 432

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 165/373 (44%), Gaps = 16/373 (4%)

Query: 3   PFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           P + +     P   + V  L+  +   V+  +S V + G++        SG ++F+L+D 
Sbjct: 30  PLAARALDTSPEHPWPVRVLASKISEYVDR-MSPVWIEGQVVELNRR--SGMSFFTLRDT 86

Query: 61  HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
            +   +        +  I    E G   +V  K + +P      +    +   G G LL 
Sbjct: 87  DADMSLSVTAMPRLMAAIATPLETGAHVVVHAKPSFWPKRGTLTMQARDIRAVGIGDLLA 146

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ ++ L  EGLF    K P+PF+P  I ++         D++     R+P +   I 
Sbjct: 147 RIEQLRRVLAAEGLFDADRKRPLPFLPHRIGLVCGREAKAKHDVVVNARDRYPDVEFEIR 206

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
            V VQG     E++ AI  L+        PR D+I++ RGGG++EDL  F++E +VRA+A
Sbjct: 207 EVAVQGVSAVAEVSRAIADLDA------DPRVDVIVVTRGGGAVEDLLPFSNEALVRAVA 260

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P++SAIGHETD  L D  AD RA TPT AA+  VP     +++L  + +R+   + 
Sbjct: 261 ACRTPLVSAIGHETDTPLLDLVADYRASTPTDAAKRIVPDVAGERANLTQVRSRMRRAVE 320

Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             ++ + + L++L     L      ++    RL R            +         +  
Sbjct: 321 HRVRTEQDRLDALRTRPVLAQPLVLVTSREERLHRDLATARRVFGHRLEHARADVAGLAQ 380

Query: 356 RIKSDFLIHNIQK 368
            +++      + +
Sbjct: 381 AVRTLSPQSTLDR 393



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 46/130 (35%), Gaps = 2/130 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R ++ + +  + + V+  +R      +        +  Q    +      + + +    
Sbjct: 304 ERANLTQVRSRMRRAVEHRVRTEQD--RLDALRTRPVLAQPLVLVTSREERLHRDLATAR 361

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
            +  H+++     V+   + +++ + ++TL RGY  ++      +    ++     +   
Sbjct: 362 RVFGHRLEHARADVAGLAQAVRTLSPQSTLDRGYAVLRSDEGTVVRDPADVTAAQELEAL 421

Query: 489 FFDGQANAIV 498
              G    +V
Sbjct: 422 VAGGTFGVVV 431


>gi|54026771|ref|YP_121013.1| exodeoxyribonuclease VII large subunit [Nocardia farcinica IFM
           10152]
 gi|81822865|sp|Q5YQ92|EX7L_NOCFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|54018279|dbj|BAD59649.1| putative exodeoxyribonuclease VII large subunit [Nocardia farcinica
           IFM 10152]
          Length = 425

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 12/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62
           S   +     + V  +S  +   ++  L  + V G+I+       +  A+  L+D  +  
Sbjct: 6   SAPANSAEHPWPVRSVSVKVMQWIDR-LGSIWVEGQITQINLRPGARTAFLVLRDPSADM 64

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +        + +     +EG   +V GK+  FP      + +  + P G G LL  +E+
Sbjct: 65  SLQVTCDPELIRRSPVPLQEGSRVVVYGKLVFFPARGSISLRVLEIRPVGVGELLARIER 124

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K  L  EGLF ++ K PIPF+PK++ +IT   GA   D+L     R+P +R  +    V
Sbjct: 125 LKALLAAEGLFDERLKRPIPFLPKVVGLITGRGGAAEHDVLTVARNRWPAVRFEVRNTAV 184

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +I  A      L E    P  ++I+LARGGGS+EDL  F+DE + RAI  ++ 
Sbjct: 185 QGPTAVPQILTA------LAELDRHPEVEVIVLARGGGSVEDLLPFSDEALCRAIVAATT 238

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PI+SAIGHE D  L+DY ADLRA TPT AA+  VP      + +  L AR    +   + 
Sbjct: 239 PIVSAIGHEPDNPLSDYVADLRAATPTDAAKRVVPDAAAELALVRELRARSAAALRGWVD 298

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L  L     L +  + +      ++RL  +    +  +I  +     H+  ++ +
Sbjct: 299 REARALAQLRSRPVLADPLREIDRRATEIERLRADARRCVRHLIRTESTATAHLREKLTA 358

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 359 VGPAATLAR 367



 Score = 77.5 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 8/127 (6%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +  +     +           + + +      +       I    T I++L       
Sbjct: 283 RELRARSAAALRGWVDREARALAQLRSR-----PVLADPLREIDRRATEIERLRADARRC 337

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRILI 487
           + H I++  T+ +     L +     TL RGY  +Q       + +    +    +++ I
Sbjct: 338 VRHLIRTESTATAHLREKLTAVGPAATLARGYAVVQRVTGPERHVVRSIADSPAGSQLRI 397

Query: 488 NFFDGQA 494
              DG  
Sbjct: 398 RVADGAV 404


>gi|330874760|gb|EGH08909.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 225

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 10/219 (4%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS +    +SGH YF+LKD+ 
Sbjct: 16  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNF-SRPASGHVYFTLKDSG 73

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 74  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 134 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219
           VQG E   +I  A+   ++          D +ILARGGG
Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGG 225


>gi|294791492|ref|ZP_06756649.1| exodeoxyribonuclease VII, large subunit [Scardovia inopinata F0304]
 gi|294457963|gb|EFG26317.1| exodeoxyribonuclease VII, large subunit [Scardovia inopinata F0304]
          Length = 431

 Score =  216 bits (550), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + VS+LS      VE       + G+I       + G AY +L+D   
Sbjct: 25  PERASETTPDNPWPVSKLSLAYHTAVER-WPATWIEGQIQEINTRRA-GSAYITLRDNVE 82

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    W+    +     + G + +V G    +   +    I + +   G G L   +
Sbjct: 83  DISLQVSGWRTFAAQASQFVQ-GDKVVVHGHPDVWMKRTSLSFIGDDIRRVGKGDLRQQI 141

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ +KKL  EGLF D +K  +P  P+ I +I +P      DI+     R+P ++  I  V
Sbjct: 142 EELRKKLKGEGLFDDSNKIALPEFPQRIGIICAPQARAEGDIVTNAKLRWPTIQFTIEHV 201

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP E+  AI +L+        P  D+II+ARGGGS EDL  F+DE +VRA A+ 
Sbjct: 202 HVQGVQCPPEVIAAIEKLDA------DPAVDLIIVARGGGSFEDLIGFSDEGVVRATADC 255

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE DWTL D AAD+RA TPT AA+  VP      + +     RL+  ++R 
Sbjct: 256 QTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQITIIQEARHRLHERLLRT 315

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++ +   +++      L      L      +    R L+ ++  ++         +   +
Sbjct: 316 VESEQQRIDAYKNRPSLTQPQTILEKPHLFITESARRLDVSMRRLLDEAGFSVEKLQASL 375

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 376 TALSPQSTLNR 386



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 5/167 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLI----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                    +   +++          +    + I   Q+   ++ ++ LR +  E++   
Sbjct: 265 HEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQITIIQEARHRLHERLLRTVESEQQRID 324

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           A  +     Q +  +   H  I +   R++  +   +     SV      L + + ++TL
Sbjct: 325 AYKNRPSLTQPQTILEKPHLFITESARRLDVSMRRLLDEAGFSVEKLQASLTALSPQSTL 384

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            RGY  +Q ++ + I+   +L+   ++ +    G+A   V +  P K
Sbjct: 385 NRGYAVVQSSDGHVISDSSSLSLHQKLTVTLKQGKAITSVESIEPKK 431


>gi|297572046|ref|YP_003697820.1| exodeoxyribonuclease VII large subunit [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932393|gb|ADH93201.1| exodeoxyribonuclease VII, large subunit [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 421

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 173/371 (46%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + +  L+  +   + S +S + V GEI        +   +F+L D   
Sbjct: 14  PPVARETSPDHPWPLRLLNAKIAEYI-SKMSRLWVEGEIITLTRRKGAKVQFFTLSDLEE 72

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I   I+      +    E G   +V  K   + G+    + ++ +   G G +L  +
Sbjct: 73  KASITCKIFAHA---LPDGIESGSRVIVCAKPDFWSGNGTLALHVDEIRAVGLGDILARI 129

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179
           E  K KL  EGLF+ Q K P+PF+P+ I +I       + D+      R+      +  V
Sbjct: 130 EALKNKLAYEGLFAPQRKKPLPFLPRTIGLIVGRNTKALHDVQVNARARWASAEFAVREV 189

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    +E+  A+ +L+ L      P  D+I++ARGGGS+EDL  F+DE ++RA+A +
Sbjct: 190 VVQGPTAVQEMIPALEELDAL------PNVDVIVIARGGGSVEDLLPFSDERLIRAVAAA 243

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHETD  L D  ADLRA TPT AA   VP     Q+ L +   R    +  L
Sbjct: 244 HTPVVSAIGHETDNPLLDLVADLRASTPTDAARKIVPDVTEEQTGLRDAVRRGRLAMDAL 303

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +    + L+       L + +  L      L +L + L +NL+  I R     +  + R+
Sbjct: 304 LTRTQHDLDIQRSRPALAHPESMLDARAQDLTQLTQWLHNNLDRHITRHASLIDSSLARL 363

Query: 358 KSDFLIHNIQK 368
           ++   +  +Q+
Sbjct: 364 RALSPLATLQR 374



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 6/169 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++  +++       +K    + E+Q  +   V++    +          L 
Sbjct: 253 HETDNPLLDLVADLRASTPTDAARKIVPDVTEEQTGLRDAVRRGRLAMDALLTRTQHDLD 312

Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           + R +      ++ +      + +L   +   L   I    + +  +   L++ +   TL
Sbjct: 313 IQRSRPALAHPESMLDARAQDLTQLTQWLHNNLDRHITRHASLIDSSLARLRALSPLATL 372

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           +RGY  ++      +T   N      I+    DG   A V  K P  E 
Sbjct: 373 QRGYAVLRTQTG-VVTSVHNATPGETIIAQLADGTFTATVNAKGPAHET 420


>gi|302865377|ref|YP_003834014.1| exodeoxyribonuclease VII large subunit [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568236|gb|ADL44438.1| exodeoxyribonuclease VII, large subunit [Micromonospora aurantiaca
           ATCC 27029]
          Length = 430

 Score =  216 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 157/372 (42%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
              S   S     + V  +S  +   + + L  V V G+++       +   + +L+D  
Sbjct: 26  QSRSDGRSTAEEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPS 84

Query: 62  SRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           + +       +  L+       EG   ++  K   +       +  + +   G G LL  
Sbjct: 85  ADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLAR 144

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           LEK KK L  EGLF    K  +PF+P  + +IT    A  RD+L     R+P +      
Sbjct: 145 LEKLKKLLAAEGLFDRSRKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVDFRTIN 204

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     +I  A+  L         P  D+I++ARGGG IEDL  F+DE + RA+  
Sbjct: 205 VAVQGPSAVPDIVGALKVL------DVDPAVDVIVIARGGGGIEDLLPFSDEALCRAVFA 258

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              P++SAIGHETD  L DY AD+RA TPT AA+  VP        +    +RL   +  
Sbjct: 259 CRTPVVSAIGHETDAPLLDYVADVRASTPTDAAKRVVPDLTEETRLIGQARSRLERAVRH 318

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
           L+  + + ++ L     L      +      +  L      +LE  +        H + R
Sbjct: 319 LVDREQHRIDLLRSRPVLARPQVMVEQRAVDVSALRDRAGRSLEHRLRGATDDLRHTLAR 378

Query: 357 IKSDFLIHNIQK 368
           +++      +++
Sbjct: 379 LRALSPAATLER 390



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 53/135 (39%), Gaps = 2/135 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  + I + +  +E+ V+  +     + +  +     +  + +  +      +  L  
Sbjct: 298 LTEETRLIGQARSRLERAVRHLVDR--EQHRIDLLRSRPVLARPQVMVEQRAVDVSALRD 355

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R    L H+++     +  T   L++ +   TL+RGY  +Q  + + +     +A    +
Sbjct: 356 RAGRSLEHRLRGATDDLRHTLARLRALSPAATLERGYAIVQRVDGHVVRAASEVAKGDPL 415

Query: 486 LINFFDGQANAIVIN 500
            +   +G+  A V  
Sbjct: 416 RVRLAEGELTATVDG 430


>gi|308235619|ref|ZP_07666356.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC
           14018]
          Length = 471

 Score =  216 bits (549), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 166/371 (44%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61
           P    ++     + VS +S      VE       V G+I       S SG  Y +L+D++
Sbjct: 66  PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 122

Query: 62  SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             I  +I+      +      +G   +V GK   +  +++   + + +   G+G L   +
Sbjct: 123 EDISISIMGFSKFVQQSKDLRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 182

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           ++ +KKL  EGLF  ++K P+P  PK I ++ +P      D++  ++ R+P+ R  +   
Sbjct: 183 DELRKKLKGEGLFDVENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHA 242

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP ++  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  
Sbjct: 243 HVQGVQCPADVIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 296

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SAIGHE DWTL D AAD+RA TPT AA+  VP        + N        I   
Sbjct: 297 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISAR 356

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +I  +        L      L      + +    + H L  ++             I
Sbjct: 357 VSNEIQLIEGYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASI 416

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 417 TALSPQSTLNR 427



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 53/166 (31%), Gaps = 5/166 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E+ Q I+  ++     I      +I ++ 
Sbjct: 306 HEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIE 365

Query: 403 ----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                    +    +      +++ + R+   L   +     +V      + + + ++TL
Sbjct: 366 GYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTL 425

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
            RGY  +Q +    +     + T   I +    G   A V +    
Sbjct: 426 NRGYAVVQISGGKVLDDSSRVKTGDDITVTLKSGLITASVTSVEKS 471


>gi|300789870|ref|YP_003770161.1| exodeoxyribonuclease VII large subunit [Amycolatopsis mediterranei
           U32]
 gi|299799384|gb|ADJ49759.1| exodeoxyribonuclease VII large subunit [Amycolatopsis mediterranei
           U32]
          Length = 415

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 12/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
                  S     + V  ++  +   +   L  V V G+++      ++  A+ +L+D  
Sbjct: 4   ESAPAPTSTAESPWPVRTVARKIGDWIHR-LGAVWVEGQVTQVSSRPNTQTAFLTLRDPS 62

Query: 62  S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +   +        + ++E    EG   +V  K + F G     +  + +   G G LL  
Sbjct: 63  ADVSMSVTCPNWLIREMEPPLREGASVVVHAKPSYFFGRGTISLRADQIRAVGIGELLAR 122

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ KK L  EGLFS Q K PIPF+PK + +IT    A  RD+L     R+P +R+ +  
Sbjct: 123 IERLKKLLTAEGLFSAQRKRPIPFLPKGVGLITGRASAAERDVLANAQGRWPHVRIKVLN 182

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG +   ++  A+   +        P  D+I++ARGGGS+EDL  F+DE + RA++ 
Sbjct: 183 TAVQGSQAVPQVMRALRIFDA------DPDIDVIVIARGGGSVEDLLPFSDEALCRAVSA 236

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  L DY ADLR  TPT A +  VP        +  +  R    +  
Sbjct: 237 TGTPVVSAIGHEPDTPLLDYVADLRCSTPTDAGKRIVPDLREETERVRQMRDRGRRALHG 296

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   LN +     L +    +   +  +D         +  ++ +      +   R
Sbjct: 297 WVDTQARLLNQIRSRPALADPLGPVQRRQDDVDVHRERARRAMLSLLAKDQAEVANARAR 356

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 357 LTALGPAATLAR 368



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 49/159 (30%), Gaps = 9/159 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
            +  ++        ++    + E+ + + Q+  +  R +      +  +L+ +R +    
Sbjct: 256 YVADLRCSTPTDAGKRIVPDLREETERVRQMRDRGRRALHGWVDTQARLLNQIRSRPALA 315

Query: 413 -----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466
                +      +     R    +   +      V+     L +     TL RGY  +Q 
Sbjct: 316 DPLGPVQRRQDDVDVHRERARRAMLSLLAKDQAEVANARARLTALGPAATLARGYAVVQF 375

Query: 467 -DTNN--NFITQKRNLATKTRILINFFDGQANAIVINKA 502
            D       +     +    ++ +   DG   A+   + 
Sbjct: 376 VDAEGNLQVLRSVSEVEAGAQLRVRVGDGAIKAVAEGEQ 414


>gi|118578622|ref|YP_899872.1| exodeoxyribonuclease VII [Pelobacter propionicus DSM 2379]
 gi|118501332|gb|ABK97814.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM
           2379]
          Length = 526

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/527 (20%), Positives = 204/527 (38%), Gaps = 49/527 (9%)

Query: 15  YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAI 67
           + +S ++  +  ++E  +S    V+ EIS   G    G  Y  L + ++      +I   
Sbjct: 6   FPLSAITKRINELLEPAISKQFWVKAEIS--TGRERGGAFYCDLVETNAGGKIVAKIACT 63

Query: 68  IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPS-GSGTLLT 118
           IW+  L  I   F  +     L  G +     +  F       + +    PS   G +  
Sbjct: 64  IWQSELATIRRAFKAKNMDLVLSNGTVVGFLCSLQFSPQYGLSLRVIDADPSIALGEMEL 123

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFPLRVIIF 177
                 ++L +EG+F    +  +P +P  + +ITS   A   D +Q ++   +  +V + 
Sbjct: 124 KKRDIIERLQKEGMFETNKELSVPLLPLRLGLITSAGSAAYNDFIQTLTASGYGFKVFVA 183

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              +QGD+  K +  A+  L  L         D++ + RGGGS  DL+  ++E I R IA
Sbjct: 184 DAMMQGDQTEKSVMRALDALARL-------EVDLVSIVRGGGSKTDLYFLDNEAIARRIA 236

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P+ + IGHE D ++ DY A+    TPT AAE  V     ++  L      L  +  
Sbjct: 237 GFGKPVWTGIGHEIDTSVLDYVANRSFKTPTAAAEELVARFIQMRRQLDEATNTLQTVWT 296

Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
             +K   + L   +  +   S + L  +   L    +EL   ++  +  +         R
Sbjct: 297 YRLKLDRDYLTRAMTGIRQGSRKLLDVTASFLREQAKELRLKVQERLSTEQVVIGRRTER 356

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL--------------------RYIFLEKK 396
           ++S   +  IQ   + +  K+Q +       +                    R + +E+ 
Sbjct: 357 LRS-LPMAMIQNLAERLAAKRQELRSRTYSRISRSGDTLSVLKQRFVKERFLRRLLVERD 415

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRILQSFAYK 455
             + +   L+ +  +        +  L  R++   +  +  +   S++    IL++   +
Sbjct: 416 SIMKVRQQLKTRFLSTFRIKSMTLANLKGRLKEERILLRFGTARNSLNDKMAILKAIDPQ 475

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
             L+RG+  +   N   I    ++  K  +     DG   + VI K 
Sbjct: 476 TVLQRGFALVYGRNGALIRSINDVTEKEIMTTRLTDGSLISEVIAKE 522


>gi|257487186|ref|ZP_05641227.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 225

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/219 (34%), Positives = 126/219 (57%), Gaps = 10/219 (4%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 16  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 74  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 134 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219
           VQG E   +I  A+   ++          D +ILARGGG
Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGG 225


>gi|254364015|ref|ZP_04980061.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium
           tuberculosis str. Haarlem]
 gi|134149529|gb|EBA41574.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium
           tuberculosis str. Haarlem]
          Length = 415

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 13/367 (3%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65
           +NS ++P + V  ++  +   ++  L  V V G+++       +   +  L+D  + +  
Sbjct: 3   QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60

Query: 66  -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
                +  +        EG++ +V GK + + G   + + +  +   G G LL  +++ +
Sbjct: 61  TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           + L  EGLF  + K PIP++P +I +IT    A  RD+    S R+P  R  +  V VQG
Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + RAIA    P+
Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SA+GHE D  L D   DLRA TPT AA+  VP     Q  + +L  R    +   +  +
Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE 294

Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              +  L     L +    +S     + R    L  NL +++  +     H+  R+ +  
Sbjct: 295 QRAVAQLRSRPVLADPMTMVSVRAEEVHRARSTLRRNLTLMVAAETERIGHLAARLATLG 354

Query: 362 LIHNIQK 368
               + +
Sbjct: 355 PAATLAR 361



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +       +      + +  + 
Sbjct: 271 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 327

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477
           +   L+  + +    +      L +     TL RGY  +Q               +    
Sbjct: 328 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 387

Query: 478 NLATKTRILINFFDGQANAI 497
           +    T++ +   DG   A+
Sbjct: 388 DAPEGTKLRVRVGDGALAAV 407


>gi|332828152|gb|EGK00864.1| exodeoxyribonuclease VII, large subunit [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 455

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/510 (19%), Positives = 183/510 (35%), Gaps = 75/510 (14%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH------- 61
           +++   S+ EL+  +K ++   L   V +R E+S  R    +GH Y    +         
Sbjct: 1   MNNQAISLYELNNLIKGVLNDTLPEMVWIRAEMSDVRVN-QNGHCYLEFIEKDRAGKTLV 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   +IW  T + +    E         G++ LV   I        + + +  + PS  
Sbjct: 60  AKARGMIWANTFHLLRAYFENSTKQTFSSGLKVLVQVSIEFHELYG-FSLTVHDIDPSYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G          K+L E+G+     +  +P     IA+I+SPT A   D L ++      
Sbjct: 119 LGDQALNRAAILKQLEEDGVLYLNKELELPVPLNRIAIISSPTAAGYEDFLDQLHKNAFG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QGD     I +A+  +   ++       D +++ RGGG+  DL  F+ 
Sbjct: 179 FVFYTKLFPAIMQGDRSEDSIISALEHIYEYQDC-----FDAVVIIRGGGATSDLSSFDS 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
            ++  + A   +PII+ IGHE D T+ D  A  RA TPT  AE  V       + L  + 
Sbjct: 234 YLLAASCAQFPLPIITGIGHERDETVLDIVAHTRAKTPTAVAEFLVDNLTETATELTEIS 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
             + +++ +                      L     RL     +    L+     +   
Sbjct: 294 QDIVSLVSQR---------------------LQDETVRLSVFETKNSFALKGWYKEQLTV 332

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +   N +    +                 I++  +    ++    K K   L    +  
Sbjct: 333 LSSARNVLAKGMI----------------RIQRENQNKFAFLEDNLKRKSLQLLKDNQS- 375

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                        L   ++  +  + K     +    + L   + +N LK+GYT     +
Sbjct: 376 ---------KFSLLEDSLKRSIQQQYKEETNRLETLDKQLHLSSPENILKKGYTLTI-KD 425

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499
              + Q   L     I   F DG+  +I+ 
Sbjct: 426 GKVVKQSGMLRKGDEITTFFPDGKVESIIK 455


>gi|108801071|ref|YP_641268.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. MCS]
 gi|119870213|ref|YP_940165.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. KMS]
 gi|123368840|sp|Q1B4H2|EX7L_MYCSS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158513068|sp|A1UKL7|EX7L_MYCSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|108771490|gb|ABG10212.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. MCS]
 gi|119696302|gb|ABL93375.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. KMS]
          Length = 411

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 14/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P   +       + V  ++  +   ++  L  V + G+++  +   ++  A+  L+D  
Sbjct: 3   TPADDQGKSPENPWPVRAVATRVAKYIDR-LGMVWIEGQLTELKIRQTT--AWMVLRDPA 59

Query: 62  S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +   +     +  +        EG + +V+GK   +  +  + + I  +   G G LL  
Sbjct: 60  ADMSLSVSCPRDLVANAPVPLSEGTQVIVLGKPQFYTRNGSFSLRISEIRAVGIGELLAR 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +++ ++ L  EGLF  + K PIPF+P  I +IT       RD++   + R+P +R  +  
Sbjct: 120 IDRLRRLLDAEGLFDPRLKRPIPFLPGTIGLITGRASHAERDVMTVAANRWPAVRFAVRN 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + R IA+
Sbjct: 180 TIVQGPNAVPQIVGA------LRELDRDPGVDVIVLARGGGSVEDLLPFSDETLCREIAS 233

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            + P++SA+GHE D  L D  ADLRA TPT AA+  VP     Q+ + +L  R    + +
Sbjct: 234 CTTPVVSAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDAAAEQAFVTDLRRRSARALRQ 293

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  + + L+ L     L    Q +      + R       ++  ++  +     H+  R
Sbjct: 294 WVHREQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSAR 353

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 354 LTTLGPAATLAR 365



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 1/107 (0%)

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             +          +  +    I      + + +      +   +      V   +  L +
Sbjct: 297 REQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSARLTT 356

Query: 452 FAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497
                TL RGY  +Q   + N +    +    T + I   DG   A+
Sbjct: 357 LGPAATLARGYAVVQTMPDTNVLRTTADAPAGTHLRIRVADGAITAV 403


>gi|15608248|ref|NP_215624.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           H37Rv]
 gi|15840545|ref|NP_335582.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           CDC1551]
 gi|31792301|ref|NP_854794.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis
           AF2122/97]
 gi|121637039|ref|YP_977262.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660894|ref|YP_001282417.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           H37Ra]
 gi|148822321|ref|YP_001287075.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           F11]
 gi|167969243|ref|ZP_02551520.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           H37Ra]
 gi|215402939|ref|ZP_03415120.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           02_1987]
 gi|215410729|ref|ZP_03419537.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426403|ref|ZP_03424322.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T92]
 gi|215429983|ref|ZP_03427902.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           EAS054]
 gi|215445275|ref|ZP_03432027.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T85]
 gi|219556994|ref|ZP_03536070.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T17]
 gi|224989512|ref|YP_002644199.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253799852|ref|YP_003032853.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis KZN 1435]
 gi|254231386|ref|ZP_04924713.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium
           tuberculosis C]
 gi|254550106|ref|ZP_05140553.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186037|ref|ZP_05763511.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           CPHL_A]
 gi|260200149|ref|ZP_05767640.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T46]
 gi|260204352|ref|ZP_05771843.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           K85]
 gi|289442538|ref|ZP_06432282.1| exodeoxyribonuclease VII, large subunit [Mycobacterium tuberculosis
           T46]
 gi|289446698|ref|ZP_06436442.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis CPHL_A]
 gi|289555105|ref|ZP_06444315.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis KZN 605]
 gi|289569101|ref|ZP_06449328.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis T17]
 gi|289573761|ref|ZP_06453988.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis K85]
 gi|289744851|ref|ZP_06504229.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis 02_1987]
 gi|289749644|ref|ZP_06509022.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis T92]
 gi|289753174|ref|ZP_06512552.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis EAS054]
 gi|289757197|ref|ZP_06516575.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T85]
 gi|294993290|ref|ZP_06798981.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           210]
 gi|297633648|ref|ZP_06951428.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730635|ref|ZP_06959753.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           KZN R506]
 gi|298524605|ref|ZP_07012014.1| exodeoxyribonuclease 7 large subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775264|ref|ZP_07413601.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu001]
 gi|306781822|ref|ZP_07420159.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu002]
 gi|306783820|ref|ZP_07422142.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu003]
 gi|306788182|ref|ZP_07426504.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu004]
 gi|306792511|ref|ZP_07430813.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu005]
 gi|306796916|ref|ZP_07435218.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu006]
 gi|306802794|ref|ZP_07439462.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu008]
 gi|306967178|ref|ZP_07479839.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu009]
 gi|306971365|ref|ZP_07484026.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu010]
 gi|307083658|ref|ZP_07492771.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu012]
 gi|313657965|ref|ZP_07814845.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           KZN V2475]
 gi|54037075|sp|P67448|EX7L_MYCBO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|54041041|sp|P67447|EX7L_MYCTU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158512944|sp|A1KHP8|EX7L_MYCBP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158513363|sp|A5U1F5|EX7L_MYCTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|254783703|sp|C1AMA2|EX7L_MYCBT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|2896745|emb|CAA17224.1| PROBABLE EXODEOXYRIBONUCLEASE VII (LARGE SUBUNIT) XSEA (EXONUCLEASE
           VII LARGE SUBUNIT) [Mycobacterium tuberculosis H37Rv]
 gi|13880722|gb|AAK45396.1| exodeoxyribonuclease, large subunit [Mycobacterium tuberculosis
           CDC1551]
 gi|31617889|emb|CAD93999.1| PROBABLE EXODEOXYRIBONUCLEASE VII (LARGE SUBUNIT) XSEA (EXONUCLEASE
           VII LARGE SUBUNIT) [Mycobacterium bovis AF2122/97]
 gi|121492686|emb|CAL71155.1| Probable exodeoxyribonuclease VII (large subunit) xseA
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124600445|gb|EAY59455.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium
           tuberculosis C]
 gi|148505046|gb|ABQ72855.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           H37Ra]
 gi|148720848|gb|ABR05473.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis F11]
 gi|224772625|dbj|BAH25431.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253321355|gb|ACT25958.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis KZN 1435]
 gi|289415457|gb|EFD12697.1| exodeoxyribonuclease VII, large subunit [Mycobacterium tuberculosis
           T46]
 gi|289419656|gb|EFD16857.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis CPHL_A]
 gi|289439737|gb|EFD22230.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis KZN 605]
 gi|289538192|gb|EFD42770.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis K85]
 gi|289542855|gb|EFD46503.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis T17]
 gi|289685379|gb|EFD52867.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis 02_1987]
 gi|289690231|gb|EFD57660.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis T92]
 gi|289693761|gb|EFD61190.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis EAS054]
 gi|289712761|gb|EFD76773.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis
           T85]
 gi|298494399|gb|EFI29693.1| exodeoxyribonuclease 7 large subunit [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216198|gb|EFO75597.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu001]
 gi|308325461|gb|EFP14312.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu002]
 gi|308331384|gb|EFP20235.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu003]
 gi|308335196|gb|EFP24047.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu004]
 gi|308339002|gb|EFP27853.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu005]
 gi|308342672|gb|EFP31523.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu006]
 gi|308350478|gb|EFP39329.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu008]
 gi|308355129|gb|EFP43980.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu009]
 gi|308359082|gb|EFP47933.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu010]
 gi|308366652|gb|EFP55503.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu012]
 gi|323720389|gb|EGB29483.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis CDC1551A]
 gi|326904665|gb|EGE51598.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis W-148]
 gi|328459597|gb|AEB05020.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis KZN 4207]
          Length = 415

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 13/367 (3%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65
           +NS ++P + V  ++  +   ++  L  V V G+++       +   +  L+D  + +  
Sbjct: 3   QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60

Query: 66  -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
                +  +        EG++ +V GK + + G   + + +  +   G G LL  +++ +
Sbjct: 61  TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           + L  EGLF  + K PIP++P +I +IT    A  RD+    S R+P  R  +  V VQG
Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + RAIA    P+
Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SA+GHE D  L D   DLRA TPT AA+  VP     Q  + +L  R    +   +  +
Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE 294

Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              +  L     L +    +S     + R    L  NL +++  +     H+  R+ +  
Sbjct: 295 QRAVAQLRSRPVLADPMTMVSVRAEEVHRARSTLRRNLTLMVAAETERIGHLAARLATLG 354

Query: 362 LIHNIQK 368
               + +
Sbjct: 355 PAATLAR 361



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +       +      + +  + 
Sbjct: 271 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 327

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477
           +   L+  + +    +      L +     TL RGY  +Q               +    
Sbjct: 328 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 387

Query: 478 NLATKTRILINFFDGQANAI 497
           +    T++ +   DG   A+
Sbjct: 388 DAPEGTKLRVRVADGALAAV 407


>gi|116071440|ref|ZP_01468709.1| Exonuclease VII, large subunit [Synechococcus sp. BL107]
 gi|116066845|gb|EAU72602.1| Exonuclease VII, large subunit [Synechococcus sp. BL107]
          Length = 387

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 9/320 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
            P YSV EL+  +  ++E        +   +S  R     GH + +L D  + I  ++W 
Sbjct: 6   IPTYSVGELNTAIGSLLERGFAPRFLLEATVS--RPQVKKGHLWLTLTDGTASISGVVWA 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             L ++ + P +G    V+GK+  +   +   +    + PS   T+L   E+ +++L EE
Sbjct: 64  SKLAQLSYRPTDGDGVTVVGKLNFWAARASITVQALDIRPS-LSTVLRQFEQVRQRLEEE 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           G+ +   +  +P  P  +A++TS   + + D+L+    R+P+ R+++ PV VQG    + 
Sbjct: 123 GVINPGRRRSLPPQPATLALLTSVPSSALADMLRTGRERWPMTRLLVIPVPVQGAVAGQI 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I      LN L E       D ++LARGGGS EDL  F+DE + R +A    P+++ IGH
Sbjct: 183 I----KALNRLAERCDALAVDGLVLARGGGSREDLAVFDDEALCRCLAKFPRPVVTGIGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD  AD RA TPT A    +P ++  + SL +   R+ ++I   I      LN 
Sbjct: 239 EDDLTIADLVADHRAATPTAAMVACLPDRDSAKRSLQDRRQRMKDLIGWRITRDRQRLND 298

Query: 310 LLKALPNSDQTLSCSRYRLD 329
               L          + + D
Sbjct: 299 RRARLHQQSPLRRLHQLQDD 318



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 47/139 (33%), Gaps = 5/139 (3%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRI-EFIL 431
             H        +     ++      L   R++ K+    RI      +     R+ +   
Sbjct: 249 ADHRAATPTAAMVACLPDRDSAKRSLQDRRQRMKDLIGWRITRDRQRLNDRRARLHQQSP 308

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             ++      ++    +L++ +  + L+RG   + +     +T   ++    RI++   D
Sbjct: 309 LRRLHQLQDDLNRKRDLLRALSPSHWLERGLALLTNNAGEALTAVTSIKVGDRIVVQMND 368

Query: 492 GQANAIVINKAPPKEQPTK 510
           G+ +  V    P   +   
Sbjct: 369 GELDTDVKVVRPSSLKSKT 387


>gi|220913295|ref|YP_002488604.1| exodeoxyribonuclease VII large subunit [Arthrobacter
           chlorophenolicus A6]
 gi|219860173|gb|ACL40515.1| exodeoxyribonuclease VII, large subunit [Arthrobacter
           chlorophenolicus A6]
          Length = 448

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + +  LS  LK  ++       V G++         G+AY +L+D  +
Sbjct: 16  PATAAETTPDNPWPLQLLSQKLKVHIDRT-PSAWVEGQVIEMNRR--GGNAYLTLRDVDA 72

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +   A +W   L +     E G   + + K   +  + +  + +  + P G G LL  +
Sbjct: 73  EVSLPASVWTKVLERKNLPLERGSRVVALLKPEFWLKTGRLNMQVRDIRPVGLGDLLARI 132

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLF+D  K P+P +P  I +IT       +D+++  + R+P +   I  V
Sbjct: 133 ERLRQALAAEGLFADSRKRPLPLLPHRIGLITGRDSDAKKDVVRNAALRWPAVEFEIREV 192

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+    ++  A      L+E    P  D+I++ARGGG++EDL  FN E +VRA+A +
Sbjct: 193 AVQGNSAVSQVVRA------LRELDGLPEVDVIVIARGGGALEDLLPFNSEELVRAVAAA 246

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           + P++SAIGHE D  L D  ADLRA TPT AA+  VP      + +     +L   I RL
Sbjct: 247 TTPVVSAIGHEADRPLLDDVADLRASTPTDAAKRIVPEVSEELAGVRQAREQLRRCIERL 306

Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  + + L        L + +  ++     ++RL R     +   + R      H+  ++
Sbjct: 307 VDRESDRLAALHSRPVLASPEGLVTVRSEEIERLLRRSSTAVNSTVVRAGDRLEHLRTQV 366

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 367 RALSPQKTLDR 377



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 10/174 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHMLREQTKN 411
           +     +D     + +  + +   +Q  EQ+ +   R +  E     A+    +    + 
Sbjct: 269 LRASTPTDAAKRIVPEVSEELAGVRQAREQLRRCIERLVDRESDRLAALHSRPVLASPEG 328

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ----- 466
            +      I++L+ R    ++  +      +      +++ + + TL RGY  ++     
Sbjct: 329 LVTVRSEEIERLLRRSSTAVNSTVVRAGDRLEHLRTQVRALSPQKTLDRGYAVVELAGPH 388

Query: 467 ---DTNNN-FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
                + +  +    +      + I   +G+  A       P E  T   Q H 
Sbjct: 389 AASSASGHAVVRHPADAPAGQPLAIRVAEGRFGATSTGTGSPGENSTTPEQHHP 442


>gi|290968309|ref|ZP_06559851.1| exodeoxyribonuclease VII, large subunit [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781668|gb|EFD94254.1| exodeoxyribonuclease VII, large subunit [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 401

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/368 (33%), Positives = 186/368 (50%), Gaps = 12/368 (3%)

Query: 16  SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           SV+++   LK  VE +  L H+ + G I G +   S+GH Y +L D +S I A+ ++G  
Sbjct: 5   SVTDVVKRLKQKVEGDNQLQHIVMEGNIIGLK-RASTGHYYMNLHDAYSSIHAVFFRGRA 63

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
            +      EG + +V+G +  +        +IE L   G G+L   L ++KK+L   G F
Sbjct: 64  GQAMAHVREGDKVIVVGSLNVYEKGGSVSFLIERLYSQGMGSLQVQLAEQKKRLAAAGYF 123

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
              HK P+P  P  I V+TS TGAV+ DI +  S R P + V ++P+ VQG+    EIA 
Sbjct: 124 DAAHKQPLPRFPWHIGVLTSHTGAVLHDIRKIASERNPYITVHLYPIPVQGESAVPEIAA 183

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+ +             D++ILARGGGS+EDLW FN   +VRAI  +++P+I+AIGHETD
Sbjct: 184 ALRK------AGANRTLDVLILARGGGSMEDLWCFNHSEVVRAIYETAVPVITAIGHETD 237

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            TLADYAAD+RA TPT AAE+A P    LQ  L  L       +    +   ++L   + 
Sbjct: 238 TTLADYAADVRAATPTHAAELAFPSFADLQLLLTQLTETAIQRMQERQERYRHSLRQAIA 297

Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
           A+      + L+  R +        +    +   RK      +  R+      +  ++  
Sbjct: 298 AIRPDRYREYLTLRRQQAISRIALAQRQWHVCQMRKRGDLQTLAARLAGLNPENLGRRGY 357

Query: 371 QHILEKQQ 378
             + +  Q
Sbjct: 358 GQVFKDGQ 365



 Score = 74.0 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 14/137 (10%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q + E+Q+     ++Q +  I  ++      L + R+Q  +RI            R    
Sbjct: 279 QRMQERQERYRHSLRQAIAAIRPDRYR--EYLTLRRQQAISRIALAQRQWHVCQMR---- 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
                      +      L     +N  +RGY  +   +   +   +++ T   + I   
Sbjct: 333 -------KRGDLQTLAARLAGLNPENLGRRGYGQVF-KDGQPVASIQSVQTGETLQIQVL 384

Query: 491 DGQANAIVINKAPPKEQ 507
           DG    +V    P  ++
Sbjct: 385 DGIVETVVKGVKPYGKR 401


>gi|158312702|ref|YP_001505210.1| exodeoxyribonuclease VII large subunit [Frankia sp. EAN1pec]
 gi|226736761|sp|A8L188|EX7L_FRASN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|158108107|gb|ABW10304.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EAN1pec]
          Length = 401

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            S       V  +S  L   + S L  V V G+++           + +L+D  +   + 
Sbjct: 4   TSTPDEPLPVRTISRALGDWI-SRLGRVWVEGQVTEISRRPGMNTVFLTLRDPVADVSLR 62

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +   + +     +G   +V GK +  PG     + +  + P G+G LL  LE+ K 
Sbjct: 63  VTCPRAVCDAVGPGLVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLERLKA 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K  +PF+P  + +IT    A  RD+++    R+P +R+ +  V VQG 
Sbjct: 123 TLAAEGLFAASRKRRLPFLPTAVGLITGRASAAERDVIENARRRWPAVRIELREVAVQGP 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               +I +A      L +       ++I++ARGGGS+EDL  F+DE ++RA+  +  P++
Sbjct: 183 LAVSQILDA------LSDLDADRAVEVIVIARGGGSLEDLLPFSDEALLRAVVAARTPVV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+RA TPT AA+  VP      + +  L +R   ++   +  + 
Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVSEQSALVEALRSRARRVLAHRLDLER 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L  L     L    + +      +  L       L   +    R   H   R+++   
Sbjct: 297 RRLADLRARPVLAAPLREIDRREQTVGALRSRSLRCLTHAVDVAERDLVHAAARMRALSP 356

Query: 363 IHNIQK 368
              +++
Sbjct: 357 AATLER 362



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 37/127 (29%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q  L +            R     ++        +       I      +  L +R    
Sbjct: 273 QSALVEALRSRARRVLAHRLDLERRRLADLRARPVLAAPLREIDRREQTVGALRSRSLRC 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L+H +      +      +++ +   TL+RGY  IQ+ +   I     +     + +   
Sbjct: 333 LTHAVDVAERDLVHAAARMRALSPAATLERGYALIQNADGAVIRSPAEIEAGDPLTVRVA 392

Query: 491 DGQANAI 497
            G   A 
Sbjct: 393 GGTFAAR 399


>gi|86607590|ref|YP_476352.1| exodeoxyribonuclease VII large subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556132|gb|ABD01089.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 409

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 115/394 (29%), Positives = 207/394 (52%), Gaps = 16/394 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RI 64
           + + P  SV  +S +LK ++  +  L+ + V GE+S     + +GH + +L D  +   +
Sbjct: 6   TDEAPLLSVGGVSRYLKSLLAGDPYLARLWVSGEVSSC-QRNRNGHLFLTLTDPETGDVL 64

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
             ++W+   +++ F PE G + L +G++  + G S Y+++I  L+P+G G L    ++ K
Sbjct: 65  KGVVWQSQTSRLSFWPEVGQQVLALGQLGIYSGGSHYRLVIWQLLPAGEGLLALRFQQLK 124

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
            +L  EGLF +Q   P+   P+ IAV++SP  A   DI + ++ R+P LRV+  P +VQG
Sbjct: 125 ARLSAEGLFDNQRPLPV--HPQCIAVVSSPHAAGWGDIRRTLNQRYPGLRVLFSPAQVQG 182

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           +  P+ I  AI ++          R ++++LARGGG+ EDL  FNDE +VRAIA   IP+
Sbjct: 183 EAAPESIVRAIRRV------EQDGRAEVLLLARGGGASEDLACFNDERVVRAIAECRIPV 236

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           ++ IGH+ D TLADYAAD  A TPT AAE  VP    LQ     L  +L     + ++  
Sbjct: 237 VTGIGHQRDETLADYAADYAAHTPTAAAERIVPDLGELQRQGSQLRQKLIERTRQALERA 296

Query: 304 INTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              L      L   + ++ L  ++ RL +    L   +     ++ +H   + +R+++  
Sbjct: 297 QQRLQQAQHHLAYVHPERLLQQAQDRLTQHQHRLLQAVRHRFQQRQQHQQALQDRLQALD 356

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
               +++    + +++  + +  +   +   + +
Sbjct: 357 PEAILKRGYALVRDEEGSLIRTHRLPPQTRLMIQ 390



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 6/169 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            ++            +       ++    + E Q+   Q+ ++ +       +     L 
Sbjct: 242 HQRDETLADYAADYAAHTPTAAAERIVPDLGELQRQGSQLRQKLIERTRQALERAQQRLQ 301

Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             +        +  +      + +   R+   + H+ +            LQ+   +  L
Sbjct: 302 QAQHHLAYVHPERLLQQAQDRLTQHQHRLLQAVRHRFQQRQQHQQALQDRLQALDPEAIL 361

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           KRGY  ++D   + I     L  +TR++I    G     V     P + 
Sbjct: 362 KRGYALVRDEEGSLIR-THRLPPQTRLMIQLASGSLWVRVEESHEPPQT 409


>gi|329767038|ref|ZP_08258566.1| exodeoxyribonuclease VII [Gemella haemolysans M341]
 gi|328837763|gb|EGF87388.1| exodeoxyribonuclease VII [Gemella haemolysans M341]
          Length = 419

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 113/389 (29%), Positives = 203/389 (52%), Gaps = 17/389 (4%)

Query: 15  YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ ++  K +++  L  + ++GEIS ++ IH++ + YFS+KD ++RI+A+ +   
Sbjct: 7   LTVTALNKYIERKFLLDPYLGEIYIKGEISNFK-IHNNNNIYFSIKDENTRINAVWFGAK 65

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                   ++G   L+  KI  +    ++ +++  +     G L     + K+KL +EGL
Sbjct: 66  TK----DFKDGDTVLIKSKINYYFPRGEHNLLVTDMKKDRIGELYQKFLELKEKLEKEGL 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  Q+K  IP   + IA++T+ TGA ++DI + I  RFP+ ++ I+   VQG+   ++I 
Sbjct: 122 FLPQYKKQIPSFSQNIAIVTAKTGAAVQDITRTIQRRFPIAKINIYSTLVQGENSVQDIV 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   +           D+IIL RGGGSIEDLW FN E ++RAI N   PI++ IGHET
Sbjct: 182 KNIKLADD-------GSNDVIILGRGGGSIEDLWSFNTEEVIRAIFNCRTPIVTGIGHET 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ +D RA TPT AAE+  P  E +++ +     +L N I  +++   N +++  
Sbjct: 235 DTTLADFVSDRRASTPTAAAELVTPNIEDIKNRISFNYDKLTNTINYILQNYKNRISNSE 294

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                 N  +  +  R  ++ L +EL  +L+I++  K        ++     L+   ++N
Sbjct: 295 NNPYYKNYSKIFTEYRRAVELLEKELSKSLQILVKDKKNDLLISKDKFIEFNLLARFKEN 354

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             + + + +    +      Y      +K
Sbjct: 355 FTNEVNRLEANSPLNIMKKGYSVAFLNDK 383



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 10/171 (5%)

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
            N+E I  R   +++ + N I      +  + +        ++  +I  ++ R + L +K
Sbjct: 259 PNIEDIKNRISFNYDKLTNTINYILQNYKNRISNSENNPYYKNYSKIFTEYRRAVELLEK 318

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
           E    L +L +  KN +        +          + +     + +     L++ +  N
Sbjct: 319 ELSKSLQILVKDKKNDLLISKDKFIEF---------NLLARFKENFTNEVNRLEANSPLN 369

Query: 457 TLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            +K+GY+     +   IT  +N+     I +   DG     V N +    +
Sbjct: 370 IMKKGYSVAFLNDKK-ITSVKNVQIGDDISVKLADGSLECKVNNISDKGVK 419


>gi|326773805|ref|ZP_08233087.1| exodeoxyribonuclease VII, large subunit [Actinomyces viscosus C505]
 gi|326635944|gb|EGE36848.1| exodeoxyribonuclease VII, large subunit [Actinomyces viscosus C505]
          Length = 462

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 160/369 (43%), Gaps = 16/369 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66
           +     + +  LS  +   V + +S V V G++        +G A+ +L+D  +   +  
Sbjct: 51  TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQVIQLNRRPGAGMAFLTLRDTDADISMSV 109

Query: 67  IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I+   L     +      EG   +V  K T +      Q+  + + P G G LL  +E+
Sbjct: 110 SIYARVLDAVLARTGAELGEGARVVVRAKPTFWAKRGSLQLQADDIRPVGVGDLLARIEQ 169

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            ++ L  EGLF  + K P+PF+P+ + ++         D+L     R+P L   +  V V
Sbjct: 170 LRRILAAEGLFDAECKRPLPFLPRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 229

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     E+  AI       E  T  + D+I++ARGGG++EDL  F+DE +VRA A    
Sbjct: 230 QGARAVGEVTRAIQ------ELDTDAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 283

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHETD  L D  AD RA TPT AA   VP        L +   RL +++   + 
Sbjct: 284 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRSVLASRLD 343

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L+ L     + +    +      L +    +   +E  +            R+ +
Sbjct: 344 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVEHRLSLAAADLRADHARLTA 403

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 404 LSPQGVLDR 412



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ +  ++    R    +          +     + +      + +   R+   + 
Sbjct: 327 LDSARERLRSVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVE 384

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           H++      +      L + + +  L RGYT ++      IT   ++     I      G
Sbjct: 385 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLASG 444

Query: 493 QANAIVINKAPPKEQ 507
           +  A V+    P+  
Sbjct: 445 RLVAQVVGATKPRPA 459


>gi|126436909|ref|YP_001072600.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. JLS]
 gi|158513459|sp|A3Q4N2|EX7L_MYCSJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|126236709|gb|ABO00110.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. JLS]
          Length = 411

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 14/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P   +       + V  ++  +   ++  L  V + G+++  +   ++  A+  L+D  
Sbjct: 3   TPADDQGKSPENPWPVRAVATRVAKYIDR-LGMVWIEGQLTELKIRQTT--AWMVLRDPA 59

Query: 62  S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +   +     +  +        EG + +V+GK   +  +  + + I  +   G G LL  
Sbjct: 60  ADMSLSVSCPRDLVANAPVPLSEGTQVIVLGKPQFYTRNGSFSLRISEIRAVGIGELLAR 119

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +++ ++ L  EGLF  + K PIPF+P  I +IT       RD++   + R+P +R  +  
Sbjct: 120 IDRLRRLLDAEGLFDPRLKRPIPFLPGTIGLITGRASHAERDVMTVAANRWPAVRFAVRN 179

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + R IA+
Sbjct: 180 PIVQGPNAVPQIVGA------LRELDRDPGVDVIVLARGGGSVEDLLPFSDETLCREIAS 233

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            + P++SA+GHE D  L D  ADLRA TPT AA+  VP     Q+ + +L  R    + +
Sbjct: 234 CTTPVVSAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDAAAEQAFVTDLRRRSARALRQ 293

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  + + L+ L     L    Q +      + R       ++  ++  +     H+  R
Sbjct: 294 WVHREQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSAR 353

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 354 LTALGPAATLAR 365



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 1/107 (0%)

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             +          +  +    I      + + +      +   +      V   +  L +
Sbjct: 297 REQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSARLTA 356

Query: 452 FAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497
                TL RGY  +Q   + N +    +    TR+ I   DG   A+
Sbjct: 357 LGPAATLARGYAVVQTMPDTNVLRTTADAPAGTRLRIRVADGAITAV 403


>gi|260654154|ref|ZP_05859644.1| exodeoxyribonuclease VII, large subunit [Jonquetella anthropi E3_33
           E1]
 gi|260631139|gb|EEX49333.1| exodeoxyribonuclease VII, large subunit [Jonquetella anthropi E3_33
           E1]
          Length = 417

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 18/372 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD---NHS- 62
                  +VSEL   +K  ++ N     V V GE++ ++   +SGHAYFSL +   + + 
Sbjct: 7   QAPSQVMTVSELVSLIKQAIDENPQFRRVVVEGELTEFKMHQASGHAYFSLAEKTFDRAG 66

Query: 63  ----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
               RI  ++++     + F+P+ G +  +IG++  +    + Q+    L P G+G    
Sbjct: 67  GRLVRIPCVMFQSWTQYMTFVPQVGDQVRLIGQVGFYADRGQVQLYATRLFPVGAGAAQR 126

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
           A    +++LL +G+FS + K P+P +P ++AV+TSPTGA + D+   +  RFP   + + 
Sbjct: 127 ARRALEERLLRDGVFSPERKRPMPELPLLVAVVTSPTGAAVHDVENVMKKRFPQASLTVV 186

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  VQG + P  I  A+ +   L      P    +++ RGGGS +DL  F+DE +VR +A
Sbjct: 187 PCLVQGVDAPDSIIRALHRAYLL------PGVQAVMIVRGGGSRDDLNPFDDERLVREVA 240

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S IP++S +GH+ D T  D AAD  APTP+ AAE   P    L++ L    + L +++ 
Sbjct: 241 RSPIPVMSGVGHDVDSTFCDRAADQFAPTPSAAAERLFPDARELENQLNAAGSHLESLVR 300

Query: 298 RLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
             +  + + L+ L K   ++    L  S   LD L   L       +         I + 
Sbjct: 301 ARLGKQGDRLSELAKRCADAASVRLRNSALWLDDLSDRLSSAALGRVRHAALKLQGISST 360

Query: 357 IKSDFLIHNIQK 368
           I++      + +
Sbjct: 361 IEALSPRLVLSR 372



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 14/138 (10%), Positives = 47/138 (34%), Gaps = 2/138 (1%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLH 417
                  +  + + +  +       ++  +R    ++ ++++ L        + R+    
Sbjct: 270 PSAAAERLFPDARELENQLNAAGSHLESLVRARLGKQGDRLSELAKRCADAASVRLRNSA 329

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
             +  L  R+      +++     +   +  +++ + +  L RGY+         +    
Sbjct: 330 LWLDDLSDRLSSAALGRVRHAALKLQGISSTIEALSPRLVLSRGYSVCL-KGGVPVRSVG 388

Query: 478 NLATKTRILINFFDGQAN 495
           +L     + +   DGQA 
Sbjct: 389 DLTPGDGVTLQLSDGQAQ 406


>gi|76800041|ref|ZP_00781962.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
 gi|76584641|gb|EAO61442.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
          Length = 215

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 91/219 (41%), Positives = 128/219 (58%), Gaps = 11/219 (5%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SVS L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ S I A +W G 
Sbjct: 5   LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
             K+ F  EEG++  V+G++  +  S  Y II+E   P G G L    E+ KKKL + G 
Sbjct: 63  FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F D+HK  IP   + I V+TSP+GAVIRDI+  +S RFP + +++FP KVQG+   +EIA
Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
             I   N           D++I+ RGG SIEDLW F +E
Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGXSIEDLWAFYEE 215


>gi|78183946|ref|YP_376381.1| exonuclease VII, large subunit [Synechococcus sp. CC9902]
 gi|123757132|sp|Q3AZZ0|EX7L_SYNS9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|78168240|gb|ABB25337.1| Exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9902]
          Length = 387

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 168/352 (47%), Gaps = 10/352 (2%)

Query: 13  PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           P YSV EL+  +  ++E        +   +S  R     GH + +L D  + I  ++W  
Sbjct: 7   PTYSVGELNTAIGSLLERGFAPRFLLEATVS--RPQVKKGHLWLTLTDGTASISGVVWAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L ++ + P +G    V+GK+  +   +   +    + PS   T+L   E+ +++L +EG
Sbjct: 65  RLAQLSYRPTDGDGVTVVGKLNFWAARASITVQALDIRPS-LSTVLRQFEQVRQRLEDEG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           + +   +  +P  P  +A++TS   + + D+L+    R+P+ R+++ P+ VQG    + I
Sbjct: 124 VINPGRQRSLPSQPATLALLTSVPSSALADMLRTGRERWPMTRLLVIPIPVQGAVADQII 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
                 LN L E       D ++LARGGGS EDL  F+DE + R +A    P+++ IGHE
Sbjct: 184 ----KVLNRLAERCEALAVDGLVLARGGGSREDLAVFDDEALCRCLAQFPRPVVTGIGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD  AD RA TPT A    +P ++  + +L +   R+ +++   I+     LN  
Sbjct: 240 DDLTIADLVADHRAATPTAAMVACLPDRDSAKRNLQDRRQRMKDVVGWRIERDRQRLNDR 299

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L      L   +   D L R+ +    +   R  +    +++    + L
Sbjct: 300 RAFLRQQSP-LRRLQQLQDDLNRKRDLLRALSPSRWLQRGLALLSNDAGETL 350



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 5/134 (3%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRI-EFIL 431
             H        +     ++      L   R++ K+    RI      +      + +   
Sbjct: 249 ADHRAATPTAAMVACLPDRDSAKRNLQDRRQRMKDVVGWRIERDRQRLNDRRAFLRQQSP 308

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             +++     ++    +L++ +    L+RG   + +     ++   ++    R++I   D
Sbjct: 309 LRRLQQLQDDLNRKRDLLRALSPSRWLQRGLALLSNDAGETLSGVTSIKVGDRVVIQMND 368

Query: 492 GQANAIVINKAPPK 505
           G+ +  V    P  
Sbjct: 369 GELDTDVKVVRPSS 382


>gi|325676553|ref|ZP_08156231.1| exodeoxyribonuclease VII large subunit [Rhodococcus equi ATCC
           33707]
 gi|325552731|gb|EGD22415.1| exodeoxyribonuclease VII large subunit [Rhodococcus equi ATCC
           33707]
          Length = 397

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 158/358 (44%), Gaps = 15/358 (4%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73
           +VS     +   ++  L  V V G+I+       +  A+  L+D      +        L
Sbjct: 3   TVS---TKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDMSLSVTCSPQLL 58

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
                   EG   ++ GK++ + G     + +  +   G G LL  +E+ +  L  EGLF
Sbjct: 59  RDAPVPLTEGSRVVMFGKLSFWTGRGSVSLRVTEIRAVGIGELLARIERLRALLAAEGLF 118

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             + K P+PF+P  I +IT    A   D+L     R+P +R  +    VQG     +I  
Sbjct: 119 DPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAHRRWPAVRFEVRNTAVQGPTAVPQIIE 178

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+       E    P  D+IILARGGGS+EDL  F+DE + RAI   + P++SAIGHE D
Sbjct: 179 ALE------ELDRDPGVDVIILARGGGSVEDLLPFSDETLCRAIVACTTPVVSAIGHEPD 232

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
             L+D+ ADLRA TPT AA+  VP     Q+ +  L  R    +   +  + + +  L  
Sbjct: 233 SPLSDHVADLRAATPTDAAKRVVPDAVAEQALVSELRGRAGAALRNWVARESHLVAQLRS 292

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L +    +      ++RL      ++   I  +     H+  R+ +      + +
Sbjct: 293 RPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     + I      +++L       ++  I +  T+V      L +     TL R
Sbjct: 291 RSRPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350

Query: 461 GYTSIQDTNN----NFITQKRNLATKTRILINFFDGQANAIVIN 500
           GY  +Q          +    +    T+I +   DG   A V+ 
Sbjct: 351 GYAVVQRVYGDTEPEVLRSVDDAPPGTQIRVRLADGAVRAAVMG 394


>gi|229818103|ref|ZP_04448385.1| hypothetical protein BIFANG_03394 [Bifidobacterium angulatum DSM
           20098]
 gi|229784707|gb|EEP20821.1| hypothetical protein BIFANG_03394 [Bifidobacterium angulatum DSM
           20098]
          Length = 423

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 165/371 (44%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + VS LS      VE       + G+I+      + G AY +++D   
Sbjct: 20  PRLARETTAENPWPVSVLSQKFHTAVEK-WPAAWICGQITEINTRRA-GSAYLTVRDDFE 77

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              I    W+           +G   ++ G+   +   ++   I + +   G+G L   +
Sbjct: 78  DIAISVSGWRAFAAAAS-QFRQGDRVVIHGRADIWVKQTRLSFIGDDIRKIGAGGLKEQI 136

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++ +KKL  EGLF    K P+P  P+ I +I +P      D++  ++ R+P +R  +   
Sbjct: 137 DELRKKLKGEGLFDADRKKPLPEFPRCIGLICAPQARAEGDVITNVNLRWPAVRFTVLHA 196

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +CP +I  AI QL+        P  D+II+ARGGG+ EDL  F+DE +VRA A  
Sbjct: 197 HVQGAQCPPDIIAAIRQLDA------DPDVDVIIVARGGGAFEDLVGFSDEGVVRAAAAC 250

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           + P++SAIGHE DWTL D AADLRA TPT AA+  VP        + N   +++  I   
Sbjct: 251 NTPLVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDIREQCQLIDNAIRQMHMRISGR 310

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  ++  +        L      L   +  +D     ++  +  II             +
Sbjct: 311 VDAELKLIEGYANRPSLTQPLTMLEPHQRLIDDARSRMDIGMRRIIDDASLTIEKAHASL 370

Query: 358 KSDFLIHNIQK 368
            +      + +
Sbjct: 371 TALSPQSTLNR 381



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 53/162 (32%), Gaps = 5/162 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQK----NRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                    +   +++       +K     R+        I Q+  +    +  E K   
Sbjct: 260 HEDDWTLIDLAADLRASTPTDAAKKVVPDIREQCQLIDNAIRQMHMRISGRVDAELKLIE 319

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              +     Q    +      I    +R++  +   I     ++      L + + ++TL
Sbjct: 320 GYANRPSLTQPLTMLEPHQRLIDDARSRMDIGMRRIIDDASLTIEKAHASLTALSPQSTL 379

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            RGY  +QD + + +   +  +  +R+ +    G   A V +
Sbjct: 380 NRGYAVVQDADGHVLDDAQRTSPGSRLTLTLKKGIVTATVDS 421


>gi|119961682|ref|YP_948520.1| exodeoxyribonuclease VII, large subunit [Arthrobacter aurescens
           TC1]
 gi|119948541|gb|ABM07452.1| exodeoxyribonuclease VII, large subunit [Arthrobacter aurescens
           TC1]
          Length = 425

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 178/371 (47%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + +  LS  LK  +E       + G++         G+A+ +L+D  +
Sbjct: 12  PGTAAETSPDNPWPLQLLSRKLKAHIERA-PAAWIEGQVIELNRR--GGNAFLTLRDVDA 68

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            I   A +W   L++ +   E G   + + K   +  + +  + ++ + P G G LL  +
Sbjct: 69  EISLPASVWSTVLDRQKVPLERGSRVVALVKADFWVKTGRLNMSVKDIRPVGLGDLLARI 128

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLF+D  K  +P +P  I +IT       +D+++  + R+P +   +  V
Sbjct: 129 ERLRQALAAEGLFADSRKRKLPLLPHRIGLITGRESDAKKDVMRNAALRWPAVEFDVREV 188

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+    +I  A+ +L+        P  D+I+LARGGG++EDL  F++E ++RA++ +
Sbjct: 189 AVQGNTAVSQIIAALKRLDA------DPHVDVIVLARGGGALEDLLPFSNEDLIRAVSAA 242

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           + P++SAIGHE D  + D  ADLRA TPT AA+  VP      + +      L   I R+
Sbjct: 243 TTPVVSAIGHEADRPILDDVADLRASTPTDAAKRIVPDVAEELAMVRQARDHLRRSISRM 302

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  + + L++L     L +    +      + RL R     +   + R     +H+  ++
Sbjct: 303 VDRETDRLHALRSRPVLASPASMVDARSEDIHRLQRRTHSAVSTAVVRALDQVHHLRAQV 362

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 363 RALSPQKTLDR 373



 Score = 79.8 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 10/153 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E+   + Q      R I      +   LH LR +      
Sbjct: 263 ADLRASTPTDAAKRIVPDVAEELAMVRQARDHLRRSISRMVDRETDRLHALRSRPVLASP 322

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--- 466
            + +      I +L  R    +S  +      V      +++ + + TL RGY  +Q   
Sbjct: 323 ASMVDARSEDIHRLQRRTHSAVSTAVVRALDQVHHLRAQVRALSPQKTLDRGYAVVQLVG 382

Query: 467 -DTNN-NFITQKRNLATKTRILINFFDGQANAI 497
            D    + ++        T + I   +G+  A+
Sbjct: 383 EDQAGHHVVSSPDEAPDGTPLSIRVAEGRFRAV 415


>gi|312138754|ref|YP_004006090.1| exodeoxyribonuclease vii large subunit xsea [Rhodococcus equi 103S]
 gi|311888093|emb|CBH47405.1| exodeoxyribonuclease VII large subunit XseA [Rhodococcus equi 103S]
          Length = 397

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 99/358 (27%), Positives = 158/358 (44%), Gaps = 15/358 (4%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73
           +VS     +   ++  L  V V G+I+       +  A+  L+D      +        L
Sbjct: 3   TVS---TKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDMSLSVTCSPQLL 58

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
                   EG   ++ GK++ + G     + +  +   G G LL  +E+ +  L  EGLF
Sbjct: 59  RDAPVPLTEGSRVVMFGKLSFWTGRGSVSLRVTEIRAVGIGELLARIERLRALLAAEGLF 118

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192
             + K P+PF+P  I +IT    A   D+L     R+P +R  +    VQG     +I  
Sbjct: 119 DPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTAVQGPTAVPQIIE 178

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
           A+       E    P  D+IILARGGGS+EDL  F+DE + RAI   + P++SAIGHE D
Sbjct: 179 ALE------ELDRDPGVDVIILARGGGSVEDLLPFSDETLCRAIVACTTPVVSAIGHEPD 232

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
             L+D+ ADLRA TPT AA+  VP     QS +  L  R    +   +  + + +  L  
Sbjct: 233 SPLSDHVADLRAATPTDAAKRVVPDAVAEQSLVSELRGRAGAALRNWVARESHLVAQLRS 292

Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L +    +      ++RL      ++   I  +     H+  R+ +      + +
Sbjct: 293 RPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     + I      +++L       ++  I +  T+V      L +     TL R
Sbjct: 291 RSRPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350

Query: 461 GYTSIQDTNN----NFITQKRNLATKTRILINFFDGQANAIVIN 500
           GY  +Q          +    +    T+I +   DG   A V+ 
Sbjct: 351 GYAVVQRVYGDTEPEVLRSVDDAPPGTQIRVRLADGAVRAAVMG 394


>gi|262201633|ref|YP_003272841.1| exodeoxyribonuclease VII large subunit [Gordonia bronchialis DSM
           43247]
 gi|262084980|gb|ACY20948.1| exodeoxyribonuclease VII, large subunit [Gordonia bronchialis DSM
           43247]
          Length = 409

 Score =  213 bits (541), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 13/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
            S  N+ D+P + V  ++  +   +   L  + V G+++       +  A+ +L+D  + 
Sbjct: 1   MSSPNTADNP-WPVRTVNTKIADWIHR-LGQIWVEGQVTQISRRPGTRTAFLTLRDPAAD 58

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             I        L + E    +G   +V+G+ + + G     + I  + P G G LL  +E
Sbjct: 59  ISISVTCSPDLLARTEVPLTDGSHVVVLGRPSYYTGRGTLSLRISDIRPVGIGQLLLRIE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K P+PF+PK I +I+    A  RD++   + R+  +R  +    
Sbjct: 119 RLRQLLAAEGLFDPRLKRPLPFLPKSIGLISGRASAAARDVVAVATGRWSAVRFEVRDAP 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG      I       + L      P  ++II+ARGGGS+EDL  F+DE ++RA+A  +
Sbjct: 179 VQGPTAVPAIL------SHLAALDAHPDVEVIIIARGGGSVEDLLPFSDEALLRAVATCT 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P+ISAIGHE D  L D  AD+RA TPT AA+  VP  E   +++  L  R  + +   +
Sbjct: 233 TPVISAIGHEPDAPLLDLVADVRAATPTDAAKRVVPDVEAELAAIAALRRRSAHALRNWV 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + + + ++ L     L      +     R+  L R L  ++   +  + R   H+  ++ 
Sbjct: 293 RREAHIVDGLRARPVLARPHTLVDAEAARVGDLRRALRRDIRRRVDVEDRRIEHLSAQLG 352

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 353 TLGPAQTLAR 362



 Score = 71.7 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 2/103 (1%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +  +    +      +  L   +   +  ++      +   +  L +     TL R
Sbjct: 303 RARPVLARPHTLVDAEAARVGDLRRALRRDIRRRVDVEDRRIEHLSAQLGTLGPAQTLAR 362

Query: 461 GYTSIQ--DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           GY  +Q  D++   +    ++    R+ I   DG A+A V   
Sbjct: 363 GYAVVQRADSDQQIVGAVADMYPGARLRIRVSDGAAHATVTEG 405


>gi|296140799|ref|YP_003648042.1| exodeoxyribonuclease VII large subunit [Tsukamurella paurometabola
           DSM 20162]
 gi|296028933|gb|ADG79703.1| exodeoxyribonuclease VII, large subunit [Tsukamurella paurometabola
           DSM 20162]
          Length = 425

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 103/372 (27%), Positives = 177/372 (47%), Gaps = 14/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +P    ++ + P + V  +S  +   ++  L  V V G+I+        G A+  L+D  
Sbjct: 6   SPSGGASTAESP-WPVRVVSMKVAQWIDR-LGEVWVEGQITQLNRR-GGGTAFLVLRDPS 62

Query: 62  S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +   +        L++ E    EG + +V GK T + G     + I  +   G G LL  
Sbjct: 63  ANVSLQVTCLPAVLDRSEVPLTEGTQVIVRGKFTYWTGRGTLSLRITEIRAVGVGELLAR 122

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ ++ L  EGLF  + K P+PF+P+ + ++T+   A  RD+      R+P +++    
Sbjct: 123 IERLRQLLHAEGLFDPRLKRPLPFLPRTVGLVTARASAAERDVRSIAEDRWPDVKIRAEY 182

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG     ++  A+  L+        P  D+IILARGGGS+EDL  F+DE + RA+  
Sbjct: 183 STVQGPTAVPQLVTALRTLDA------DPDVDVIILARGGGSVEDLLPFSDEALCRAVHA 236

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  PI+SAIGHE D  L D+AAD+RA TPT AA+  VP     +  +  L  R    +  
Sbjct: 237 ARTPIVSAIGHEPDNPLCDFAADVRAATPTDAAKRVVPDVLAERDRVAELRDRAAAALRG 296

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  ++  L SL       +  + +      +DRL R+   ++  ++ R+     H+  R
Sbjct: 297 WVSREVRALESLRSRPVFAHPYRLIDDRADDIDRLRRDGRRDVRRLLDREADGVRHLAAR 356

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 357 LTALGPAATMAR 368



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQ----DTNNNFITQKRNLATKTRILINFFDGQANAI 497
           V      L +     T+ RGY  +Q    D  N  +     +A  T++ +   DG A A 
Sbjct: 350 VRHLAARLTALGPAATMARGYAVVQKVTPDGENPVVRGIDEIAPGTQLRVRLPDGAARAA 409

Query: 498 VINKA 502
           V+   
Sbjct: 410 VMGVE 414


>gi|241889623|ref|ZP_04776921.1| exodeoxyribonuclease VII, large subunit [Gemella haemolysans ATCC
           10379]
 gi|241863245|gb|EER67629.1| exodeoxyribonuclease VII, large subunit [Gemella haemolysans ATCC
           10379]
          Length = 418

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 186/367 (50%), Gaps = 18/367 (4%)

Query: 15  YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +V+ L+ ++  K  ++  L  V ++GEIS ++      + YFS+KD +S I A  +   
Sbjct: 7   LTVTALNKYIERKFKLDPYLGEVYIKGEISNFK--PHGNNIYFSIKDENSVIRANWFGAR 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
                   ++G   L+  K+  +    +  +++  +     G L     + K+KL +EGL
Sbjct: 65  SKNF----KDGDTVLIKTKVDFYLKRGEVNLVVLDMKKDRIGELYQKFLELKEKLEKEGL 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191
           F  Q+K  IP   + IAV+T+ TGA ++DI + I  RFP+ ++ I+   VQG+   ++I 
Sbjct: 121 FLPQYKKRIPSFSQNIAVVTAKTGAAVQDITRTIQRRFPIAKINIYSTLVQGENSVQDIV 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
             I   +           D+IIL RGGGSIEDLW FN E ++RAI N + PI++ IGHET
Sbjct: 181 KNIKLADD-------GTNDVIILGRGGGSIEDLWSFNTEEVIRAIFNCTTPIVTGIGHET 233

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TLAD+ +D RA TPT AAE+  P  E +++ +     +L N I  +I+     + +  
Sbjct: 234 DTTLADFVSDRRASTPTAAAELVTPNIEDIKNRISFNYDKLTNTINYIIQTYKTRVLNSE 293

Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
                 N  +       R++ L +EL  +L+I +  K         +  +  L+   ++N
Sbjct: 294 NNPYYKNYSKVFIDYNNRVELLEKELNKSLQIFVKDKQHELKASTEKFLNIDLLGKFKEN 353

Query: 370 RQHILEK 376
             + + K
Sbjct: 354 FTNEINK 360



 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 21/112 (18%)

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRI--------------------LQSFAYK 455
            +  ++ L   +   L   +K     +  +T                      L++ +  
Sbjct: 308 YNNRVELLEKELNKSLQIFVKDKQHELKASTEKFLNIDLLGKFKENFTNEINKLEANSPL 367

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           N +K+GY+     +   IT  + +     I +   DG     V N +    +
Sbjct: 368 NIMKKGYSVAFLGDKK-ITTVKEIYAGDEISVQLVDGSLECKVNNISDKGVK 418


>gi|324997963|ref|ZP_08119075.1| putative exodeoxyribonuclease VII large subunit [Pseudonocardia sp.
           P1]
          Length = 425

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 14/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            + +   + V  ++  +   V+  L  V V G+++       +G A+ +L+D  +   + 
Sbjct: 2   TTSEEDPWPVRTVARKIAEWVDR-LGAVWVEGQLAQVNAR--TGTAFLTLRDPAADVSLQ 58

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
                  +        EG   +V GK + + G     + ++ +   G G LL  +E+ ++
Sbjct: 59  LTAPSSLVRDSGGAVTEGSRVIVHGKPSFYLGRGTLSLRVDRIRAVGLGELLARIERLRR 118

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF    K   P +P  I ++T    A   D++   + R+P +R  I  V VQG 
Sbjct: 119 LLDAEGLFDPALKRRPPLLPHTIGLVTGRDSAAEHDVVSGATARWPAVRFRIENVAVQGG 178

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              +++  A+  L+        P   +I+LARGGGS+EDL  F+DE + RA+A    P++
Sbjct: 179 LAVEQVVGALRTLDR------DPDVQVIVLARGGGSVEDLLPFSDETLCRAVAACRTPVV 232

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+R  TPT A    VP      + +  L  R  + +   +  + 
Sbjct: 233 SAIGHEPDTPLVDHVADVRCSTPTAAGRSLVPDLGEETARIAGLRDRARHALHGWVDREQ 292

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L+ L +   L    + +      +          +   + R      H+  R+ +   
Sbjct: 293 RRLDDLRRRPALAEPLRLVGSREREIADARAAAHRAVLRRLDRSSAELEHLTARLTALGP 352

Query: 363 IHNIQK 368
              + +
Sbjct: 353 TATLAR 358



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 32/121 (26%), Gaps = 5/121 (4%)

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
             +    +      I          +  ++      +   T  L +     TL RGY  +
Sbjct: 304 LAEPLRLVGSREREIADARAAAHRAVLRRLDRSSAELEHLTARLTALGPTATLARGYAIV 363

Query: 466 Q-DTNNN----FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520
           Q   + +     +    +    T + I   DG   A V        + +         +E
Sbjct: 364 QLTGSGDDVPPLLRSAADAPAGTGLRIRVADGAVAATVTGPDDDSRRASGTTTTSGTAKE 423

Query: 521 K 521
            
Sbjct: 424 T 424


>gi|259506965|ref|ZP_05749865.1| exodeoxyribonuclease, large subunit [Corynebacterium efficiens
           YS-314]
 gi|259165417|gb|EEW49971.1| exodeoxyribonuclease, large subunit [Corynebacterium efficiens
           YS-314]
          Length = 393

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 12/349 (3%)

Query: 25  KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA--IIWKGTLNKIEFLPEE 82
           K+ +E  L H+ V G+++      +   +Y +L+D    +          +       ++
Sbjct: 2   KNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVEQEVSVQLTCPTEIIRNRPTPLKD 60

Query: 83  GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142
           G   +V GK   + G   + + +  + P G G LL  +E+ +++L  EGLF    K  +P
Sbjct: 61  GDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLARIEELRRQLAAEGLFDPARKKRLP 120

Query: 143 FIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLK 201
           F+PK + +IT    A  RD+L     R+P ++  +    VQG     EI  A      L 
Sbjct: 121 FLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVINTAVQGASAVPEIIAA------LG 174

Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261
           E    P  D+II+ARGGGS+EDL  F++E + RA+A +  P++SAIGHE D  + D  AD
Sbjct: 175 ELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAAAQTPVVSAIGHEPDTPILDNVAD 234

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQ 319
           LRA TPT AA+  VP     +  +  L  R    +   +  +   L S+     L +   
Sbjct: 235 LRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADPMT 294

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            +   R  ++R    L  ++  ++  +      +  ++ +      + +
Sbjct: 295 PIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLAR 343



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E++  I Q+  +    +      +   L  +R +      
Sbjct: 233 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 292

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467
              I      +++ ++ +   ++H +++  + V+     + +     TL RGY+ +Q   
Sbjct: 293 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 352

Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            +      +T        +++ I   DG   A  +N     
Sbjct: 353 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 393


>gi|310286998|ref|YP_003938256.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium bifidum
           S17]
 gi|309250934|gb|ADO52682.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium bifidum
           S17]
          Length = 471

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + VS LS      VE       + G+I+      + G AY +++D   
Sbjct: 70  PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 127

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119
              I    W+   +K     ++G   +V GK   +   ++   I + +   GSG  L   
Sbjct: 128 DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 186

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +++ + KL  EGLF    K P+P  P  I +I +P      D++  +  R+P +R  I  
Sbjct: 187 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 246

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG +CP+ I  AI +L+        P  D+II+ARGGGS EDL  F+DE +VRA A 
Sbjct: 247 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 300

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              PI+SAIGHE DWTL D AADLRA TPT AA+  VP        + N   R+   I  
Sbjct: 301 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 360

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +I  +        L      L   +  +D   R ++  L  I+         +   
Sbjct: 361 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 420

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 421 LTALSPQSTLDR 432



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 7/160 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       +K    + E+ Q I   +   +R     +      L 
Sbjct: 311 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 369

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     Q    +      +     R++  L+  +     +V      L + + ++T
Sbjct: 370 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 429

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           L RGY  +Q+ + + I     +     + +    G   A 
Sbjct: 430 LDRGYAVVQNADGHVIDDAGKVGAGDHLTLTLRKGVITAT 469


>gi|311063873|ref|YP_003970598.1| exodeoxyribonuclease VII large subunit [Bifidobacterium bifidum
           PRL2010]
 gi|310866192|gb|ADP35561.1| XseA Exodeoxyribonuclease VII large subunit [Bifidobacterium
           bifidum PRL2010]
          Length = 471

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + VS LS      VE       + G+I+      + G AY +++D   
Sbjct: 70  PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 127

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119
              I    W+   +K     ++G   +V GK   +   ++   I + +   GSG  L   
Sbjct: 128 DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 186

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +++ + KL  EGLF    K P+P  P  I +I +P      D++  +  R+P +R  I  
Sbjct: 187 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 246

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG +CP+ I  AI +L+        P  D+II+ARGGGS EDL  F+DE +VRA A 
Sbjct: 247 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 300

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              PI+SAIGHE DWTL D AADLRA TPT AA+  VP        + N   R+   I  
Sbjct: 301 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 360

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +I  +        L      L   +  +D   R ++  L  I+         +   
Sbjct: 361 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 420

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 421 LTALSPQSTLDR 432



 Score = 93.3 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 7/160 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       +K    + E+ Q I   +   +R     +      L 
Sbjct: 311 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 369

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     Q    +      +     R++  L+  +     +V      L + + ++T
Sbjct: 370 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 429

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           L RGY  +Q+ + + I     ++    + +    G   A 
Sbjct: 430 LDRGYAVVQNADGHVIDDAGKVSAGDHLTLTLRKGVITAT 469


>gi|260905864|ref|ZP_05914186.1| exodeoxyribonuclease VII large subunit [Brevibacterium linens BL2]
          Length = 435

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 171/371 (46%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH- 61
           P +   +     + +S LS  +K  ++  +S V + G++        +  +Y +L+D   
Sbjct: 22  PATAGETTAENPWPLSLLSSKMKSYIDR-MSSVWIEGQVVELNHRGKA--SYLTLRDTDV 78

Query: 62  -SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +   IWK  L +      EG   +   K   +  + +  +    +   G G LL  L
Sbjct: 79  ETSLPVQIWKNVLERTGAPLSEGSHVVANLKADFWTKTGRLTMRANDIRAVGLGELLARL 138

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ KK+L  EGLF    K  +PF+P  I +IT       +D++Q +  R+P     I   
Sbjct: 139 ERLKKQLGAEGLFDPNRKKRLPFLPNRIGLITGRDSDAQKDVVQNVHLRWPAAEFEIRNC 198

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG +    +         L E    P+ DII++ARGGGS+EDL  F++E +VRA++ +
Sbjct: 199 AVQGPDAVPGVMK------NLAELDADPQIDIIVIARGGGSMEDLLPFSNEALVRAVSEA 252

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  + D  ADLRA TPT AA+  VP       +L+   A L+  + R+
Sbjct: 253 KTPVVSAIGHEADRPILDEVADLRASTPTDAAKRIVPDVAEEAMNLLRARAELDAAVNRI 312

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           I  +   L ++     L      ++    +L  + R         + +     NH+ ++ 
Sbjct: 313 IDREQEMLTAVRSRPVLAEPQTMVTAHEEQLRLVRRRSLQATTTRVMQGQTEINHLRSQA 372

Query: 358 KSDFLIHNIQK 368
           +S   +  +++
Sbjct: 373 RSLSPLRTLER 383



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 16/159 (10%), Positives = 53/159 (33%), Gaps = 5/159 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    + E+  ++ +   +    +      +  +L  +R +      
Sbjct: 273 ADLRASTPTDAAKRIVPDVAEEAMNLLRARAELDAAVNRIIDREQEMLTAVRSRPVLAEP 332

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           +  +      ++ +  R     + ++    T ++      +S +   TL+RGY  +Q  +
Sbjct: 333 QTMVTAHEEQLRLVRRRSLQATTTRVMQGQTEINHLRSQARSLSPLRTLERGYAVVQSDD 392

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
              I     +     + +    G+ +A V       +  
Sbjct: 393 GQAIRDSNEVKAGDGVHVRVAHGRFDAAVTAVQESTDSS 431


>gi|119715314|ref|YP_922279.1| exodeoxyribonuclease VII large subunit [Nocardioides sp. JS614]
 gi|158513099|sp|A1SFK7|EX7L_NOCSJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|119535975|gb|ABL80592.1| Exodeoxyribonuclease VII large subunit [Nocardioides sp. JS614]
          Length = 411

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 174/378 (46%), Gaps = 13/378 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            + ++SL+ P   V +++  +   V+  L  V V G+++           + +L+D  + 
Sbjct: 1   MALESSLESPA-PVRQIANAIAGWVDR-LGAVWVEGQVAQVSRRPGLNTVFLTLRDAVAD 58

Query: 64  IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           I       +   + +     EG   ++  K + +       +    +   G G LL  LE
Sbjct: 59  ISVPVTCSRTLFDGLNPPLVEGASVVLHAKPSYYANRGTLSLYAREIRMVGLGELLARLE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +R++ L  EGLF+ + K P+PF+P  + ++T+P  A  RD+L+    R+P +   I    
Sbjct: 119 RRRQLLAAEGLFAAELKRPLPFLPGTVGLVTAPNSAAERDVLENARRRWPAVAFEIAYAA 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           +QG     E+  A+ +L+        P  ++I++ARGGGS+EDL  F+DE ++RA+    
Sbjct: 179 MQGPRSASEVIEAVERLDR------DPAVEVIVVARGGGSVEDLLPFSDEALIRAVHRIR 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  AD+RA TPT AA++ VP     Q ++     R    + R I
Sbjct: 233 TPLVSAIGHEPDSPLLDLVADVRASTPTDAAKLVVPDVAEEQRNVRRARERARGALARWI 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ L     L +    L   R  +D+L       L   + R      H   R +
Sbjct: 293 AREQAGLDGLRSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARAR 352

Query: 359 SDFLIHNIQKNRQHILEK 376
           +   +  +Q+    + + 
Sbjct: 353 ALSPLATLQRGYAVLQDA 370



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 38/102 (37%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                    +  +      + +L  R    L H +      +       ++ +   TL+R
Sbjct: 303 RSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARARALSPLATLQR 362

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           GY  +QD + + +T    +A K ++ +   DG+ +A   +  
Sbjct: 363 GYAVLQDADGHVVTSVGAVAPKQQVSVRVADGRIHATTTSTE 404


>gi|296169974|ref|ZP_06851581.1| exodeoxyribonuclease VII large subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895378|gb|EFG75084.1| exodeoxyribonuclease VII large subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 399

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 12/351 (3%)

Query: 23  HLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIWKGTLNKIEFLP 80
            +   ++  L  V V G+++       S   +  L+D  +   +     +  +       
Sbjct: 7   RVAGWIDR-LGTVWVEGQLAQISARPDSKTVFMVLRDPAADMSLSVTCSRDLVANAPVKL 65

Query: 81  EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140
            EG + +V GK + + G   + + +  +   G G LL  +++ ++ L  EGLF  + K P
Sbjct: 66  AEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIDRLRRLLEAEGLFDPRLKRP 125

Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNT 199
           IPF+P ++ +IT    A  RD+    + R+P +R  +    VQG     +I  A      
Sbjct: 126 IPFLPNMVGLITGRASAAERDVTTVATGRWPGVRFAVRNTAVQGPNAVAQIVEA------ 179

Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259
           L E       D+I++ARGGGS+EDL  F+DE + RAIA    P+ISA+GHE D  L D  
Sbjct: 180 LYELDRHAEVDVIVVARGGGSVEDLLPFSDETLCRAIAACRTPVISAVGHEPDNPLCDLV 239

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNS 317
           ADLRA TPT AA+  VP     Q  + +L  R    +   +  +   L  +     L   
Sbjct: 240 ADLRAATPTDAAKKVVPDTAAEQRLVEDLRRRSAQALRNWVSREQRALAQVRSRPVLAEP 299

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L+     + R    +  ++  +   +     H+  R+ +      + +
Sbjct: 300 LTALTARADEIHRARSAIRRDITRLAAAETDRVGHLGARLATLGPAATLAR 350



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 50/154 (32%), Gaps = 9/154 (5%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       +K       +Q+ +E + ++  + +      +   L  +R +    
Sbjct: 238 LVADLRAATPTDAAKKVVPDTAAEQRLVEDLRRRSAQALRNWVSREQRALAQVRSRPVLA 297

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466
                +      I +  + I   ++    +    V      L +     TL RGY  +Q 
Sbjct: 298 EPLTALTARADEIHRARSAIRRDITRLAAAETDRVGHLGARLATLGPAATLARGYAVVQA 357

Query: 467 ---DTNNNFITQKRNLATKTRILINFFDGQANAI 497
                    +    +    TR+ +   DG   A+
Sbjct: 358 VPDSAAPAVLRSVADAPAGTRLRVRVADGAIAAV 391


>gi|113953310|ref|YP_731724.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9311]
 gi|123031574|sp|Q0I748|EX7L_SYNS3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|113880661|gb|ABI45619.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. CC9311]
          Length = 390

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 9/314 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           ++   P YSV EL+  +  ++E        ++  +S  R     GH + +L D  + I A
Sbjct: 2   SAESLPSYSVRELNNAIGVLLERGFAPRFVIQATVS--RPQVKKGHLWLTLSDGEASITA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L +++F+P +G    VIGK+  +   +   + +  + PS   T+L   E  K +
Sbjct: 60  VAWASKLKQLDFVPADGDGVTVIGKLNFWSARASLAVQVLDMRPS-LTTVLRRFETVKAQ 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           LLEEG+        +P  P  +AV+TS   + + D+L+    R+PL  +++ P+ VQG+ 
Sbjct: 119 LLEEGVIDPSRHRKLPAYPNRLAVLTSVPSSALADMLRTAQDRWPLSELLVVPIPVQGEV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P  I   +L  N L E       D I++ARGGGS EDL  F+D  + R +A   +P+++
Sbjct: 179 AP--IICGVL--NRLAETHHQLGLDAIVIARGGGSREDLMVFDDAEVCRKLATFPLPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD RA TPT A    +P +E  Q ++    +RL+      ++   +
Sbjct: 235 GLGHEDDLTVADLVADHRAATPTAAMVTLMPSRESAQQTITQRRSRLSEYKRWRLEQANS 294

Query: 306 TLNSLLKALPNSDQ 319
            L      L     
Sbjct: 295 RLRDRHLLLDALRP 308



 Score = 69.8 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 16/128 (12%)

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--------------- 446
           L   RE  +  I    + + +         + +++  H  +                   
Sbjct: 263 LMPSRESAQQTITQRRSRLSEYKRWRLEQANSRLRDRHLLLDALRPEVTLQRRRDQWQQR 322

Query: 447 -RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            ++L++ + +  L RG+  +  TN   I    +++   ++ I   DG   A+       +
Sbjct: 323 QQLLRALSPQRWLNRGFAMLNTTNGQPIQSINDISLNEQLQILLKDGVIQAVAKTIQANE 382

Query: 506 EQPTKKCQ 513
              +K   
Sbjct: 383 TSNSKTSP 390


>gi|320532783|ref|ZP_08033563.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320135003|gb|EFW27171.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 434

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 160/369 (43%), Gaps = 16/369 (4%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66
           +     + +  LS  +   V + +S V V G++        +G A+ +L+D  +   +  
Sbjct: 23  TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQVIQLSRRPGAGMAFLTLRDTDADVSMSV 81

Query: 67  IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I+   L     +      EG   ++  K T +      Q+  + + P G G LL  +E+
Sbjct: 82  SIYARVLDAVLARTGAELSEGARVVIRAKPTFWTKRGSLQLQADDIRPVGVGDLLARIEQ 141

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            ++ L  EGLF  + K P+PF+P+ + ++         D+L     R+P L   +  V V
Sbjct: 142 LRRILAAEGLFDAERKRPLPFLPRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 201

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     E+  AI       E  T  + D+I++ARGGG++EDL  F+DE +VRA A    
Sbjct: 202 QGARAVGEVTRAIQ------ELDTDAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 255

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHETD  L D  AD RA TPT AA   VP        L +   RL +++   + 
Sbjct: 256 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRSVLASRLD 315

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L+ L     + +    +      L +    +   +E  +            R+ +
Sbjct: 316 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVEHRLSLAAADLRADHARLTA 375

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 376 LSPQGVLDR 384



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   ++ +  ++    R    +          +     + +      + +   R+   + 
Sbjct: 299 LDSARERLRSVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVE 356

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
           H++      +      L + + +  L RGYT ++      IT   ++     I      G
Sbjct: 357 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAQG 416

Query: 493 QANAIVINKAPPKEQ 507
           +  A V+    P+  
Sbjct: 417 RLVAQVVGATRPRPA 431


>gi|260592125|ref|ZP_05857583.1| exodeoxyribonuclease VII, large subunit [Prevotella veroralis
           F0319]
 gi|260536003|gb|EEX18620.1| exodeoxyribonuclease VII, large subunit [Prevotella veroralis
           F0319]
          Length = 433

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 97/510 (19%), Positives = 181/510 (35%), Gaps = 98/510 (19%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +     ++ EL+  +  ++ S LSH   V  E+S      S GH Y  L  KD       
Sbjct: 1   MTTKALTLYELNALVSDVISSTLSHSYWVEAELSE--ARESRGHCYMELIEKDARGNVPI 58

Query: 62  SRIDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +R  A  W     +I+             G++ +++     F     +  I++ + P   
Sbjct: 59  ARAQAKCWHNVWAEIQPSFIKITGQTIHAGMKVMLLVHAQ-FHPQYGFSWIVDDINPEFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G ++   ++  ++L  EG++  Q +  +    + IAVI+S T A   D   ++      
Sbjct: 118 MGDMMRKRQEIIRQLKAEGVYDLQRELCLSMFAQRIAVISSETAAGYGDFCNQLLHNEFG 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
               V +FP  +QGD+  + I NA+  +N  +E       D +++ RGGG+  DL  F+ 
Sbjct: 178 LAFHVELFPAVMQGDQVEQSIINALNLINEREED-----FDCVVIIRGGGATADLSGFDT 232

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +AN  +PII+ IGHE D ++ D  + +R  TPT AA   +              
Sbjct: 233 LNLAENVANFPLPIITGIGHERDESVLDMVSFMRVKTPTAAAAYLI-------------- 278

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                                          L+ +  R++     +   ++  + R+  H
Sbjct: 279 -----------------------------NQLAATLARVENAQASIVEAVQRRLEREKMH 309

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
             HI   I   F +    +    +    Q +                           + 
Sbjct: 310 IQHIATHIPMLFSVVR-TQQEARLDSLSQRLV-------------------------NRM 343

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           K R+      +  ++      L  ++ +    + +  +  Q    K  L RGY+     N
Sbjct: 344 KERLSKARYDLDSMMRYAIPTLVGRLSNEQRRIDMLAQRAQLMDPKLLLSRGYSITLH-N 402

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499
              +     L     I   F  G+  ++V 
Sbjct: 403 GKAVRNASQLKAGDVITTRFEQGEVESVVK 432


>gi|145593436|ref|YP_001157733.1| exodeoxyribonuclease VII, large subunit [Salinispora tropica
           CNB-440]
 gi|145302773|gb|ABP53355.1| Exodeoxyribonuclease VII large subunit [Salinispora tropica
           CNB-440]
          Length = 417

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66
           S     + V  +S  +   + + L  V V G+++       +   + +L+D  + +    
Sbjct: 10  STPEEPWPVRVVSQKIGAWI-ARLGWVWVDGQVAQVSRRPGASTVFLTLRDPSADLSLTV 68

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
              +  L+       EG   ++  K   +       +  + +   G G LL  LEK KK 
Sbjct: 69  TTNRDVLDAGAPQLREGARVVLHAKPHFYAARGTLSLRADEIRQVGLGELLARLEKLKKL 128

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF  + K   PF+P  I +IT    A  RD+      R+P +      V VQG  
Sbjct: 129 LAAEGLFDPRRKRRPPFLPHRIGLITGRASAAERDVRTNARRRWPAVAFRTVNVAVQGPS 188

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +I +A+  L+        P  ++I++ARGGGSIEDL  F+DE + RA+     P++S
Sbjct: 189 AVPQIVDALRVLDA------DPTIEVIVIARGGGSIEDLLPFSDEALCRAVFGCRTPVVS 242

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHETD  L DY AD+RA TPT AA+  VP        +    +RL   +  L+  + +
Sbjct: 243 AIGHETDAPLLDYVADIRASTPTDAAKRVVPDLAEEVRLIGQARSRLERAVRNLVDREAH 302

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L  L     L   +  +      +  L    +  L   +        H   R+++    
Sbjct: 303 RLELLRSRPVLARPEVMIEQRATDVSGLRHRADRCLAHRLTAAEDDLRHTRARLRALSPA 362

Query: 364 HNIQK 368
             + +
Sbjct: 363 ATLDR 367



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 55/145 (37%), Gaps = 2/145 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  + I + +  +E+ V+  +       + ++     +  + +  I    T +  L  
Sbjct: 275 LAEEVRLIGQARSRLERAVRNLVDREAH--RLELLRSRPVLARPEVMIEQRATDVSGLRH 332

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R +  L+H++ +    +  T   L++ +   TL RGY  ++  +   +     +     +
Sbjct: 333 RADRCLAHRLTAAEDDLRHTRARLRALSPAATLDRGYAIVRRADGKVVRAVSEVTAGDPV 392

Query: 486 LINFFDGQANAIVINKAPPKEQPTK 510
            +   DG+ +A V           +
Sbjct: 393 RVRLADGELSATVDAGEHRPATQRR 417


>gi|150009300|ref|YP_001304043.1| exodeoxyribonuclease VII large subunit [Parabacteroides distasonis
           ATCC 8503]
 gi|256841868|ref|ZP_05547374.1| exodeoxyribonuclease VII, large subunit [Parabacteroides sp. D13]
 gi|149937724|gb|ABR44421.1| putative exodeoxyribonuclease VII large subunit [Parabacteroides
           distasonis ATCC 8503]
 gi|256736762|gb|EEU50090.1| exodeoxyribonuclease VII, large subunit [Parabacteroides sp. D13]
          Length = 444

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 91/519 (17%), Positives = 184/519 (35%), Gaps = 96/519 (18%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59
           M P     S +    S+ EL+  ++  +         VR E+S  R   SSGH Y    +
Sbjct: 1   MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60

Query: 60  NHSR-------IDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104
            +++       +   IW  T   ++  F  E G       + LV   +          + 
Sbjct: 61  KNAQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119

Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163
           +  + P+   G ++    +  ++L EEG+F+   + P P +P+ IA+ITSPT A   D +
Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179

Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220
            +++     +P    +FP  +QG+     +  A+ ++   ++       D++++ RGGG+
Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234

Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280
             DL  F+  ++    A   +PII+ IGHE D    D   DL A T              
Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERD----DTVVDLVAHTRMKTPTAVAE---- 286

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
                                        L+  + +  + L      +  L  ++    +
Sbjct: 287 ----------------------------FLISRMDSVGEELENLCQDVSLLAMDILSRQK 318

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +         ++       +   I++NR  +      +  +                 
Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASGLPAMASGL------------- 357

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                       +    + ++    R+   ++ K+      + +T + ++  +    LKR
Sbjct: 358 ------------LSRRQSVLENTELRLRNGITSKLSEDVRFIQLTEQFIKMASPDYILKR 405

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           GY+     +   I    +L     +   F DG+  +I+ 
Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443


>gi|317125807|ref|YP_004099919.1| exodeoxyribonuclease VII large subunit [Intrasporangium calvum DSM
           43043]
 gi|315589895|gb|ADU49192.1| Exodeoxyribonuclease VII large subunit [Intrasporangium calvum DSM
           43043]
          Length = 470

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 171/389 (43%), Gaps = 20/389 (5%)

Query: 1   MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58
           M P  ++   +     + V  LS  +   V+  +S + V G++  +      G A+ +L+
Sbjct: 1   MGPLPERAAETTAEQPWPVRVLSLKIADYVDK-MSQLWVEGQVIQFS--PRGGTAFLTLR 57

Query: 59  DNHS----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
           D        +   +    +N +     +G   ++  K T +      Q+    + P G G
Sbjct: 58  DPDVDMSLSVSVSM--NAVNAMPIPLTQGARVVLQAKPTFWTKRGTLQLEARQIRPVGIG 115

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LR 173
            LL  +E  K+ L  EG+F    K PIPF+P+ + +IT  + A  +D+++    R+P +R
Sbjct: 116 DLLARVEILKRTLAAEGVFDADRKKPIPFLPQRVGLITGRSSAAEKDVVENARRRWPAVR 175

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
             I  V VQG     E+  A      L +    P  D+I++ARGGG++E+L  F++E ++
Sbjct: 176 FEIREVAVQGSTAVTEVCAA------LVDLDAHPEVDVIVIARGGGALEELLPFSNEAMI 229

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
           RA+A +  P+ISAIGH+ D  L D  AD RA TPT A +  VP      + +     RL 
Sbjct: 230 RAVAAARTPVISAIGHDVDQPLLDLVADWRASTPTDAGKKVVPDAARETALVTAGRDRLR 289

Query: 294 NIIIRLIKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
             + R ++ +            L +    +   R  ++ L       +E  + R      
Sbjct: 290 LALGRRVEVERRGLRSLLSRPVLADPVAQVRVRRTEIEALRGRAAVRMEGRLTRAGDQVE 349

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           H++ ++ +      + +    +  +   I
Sbjct: 350 HLLRQVAALSPQSTLDRGYAVVQHRDGRI 378



 Score = 90.2 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 3/157 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              R+  L         +    R     +  +  +   +      ++    T I+ L  R
Sbjct: 273 DAARETALVTAGRDRLRLALGRRVEVERRGLRSLLSRPVLADPVAQVRVRRTEIEALRGR 332

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
               +  ++      V    R + + + ++TL RGY  +Q  +   +  + ++     + 
Sbjct: 333 AAVRMEGRLTRAGDQVEHLLRQVAALSPQSTLDRGYAVVQHRDGRIVMDQDDVGIGELLR 392

Query: 487 INFFDGQANAI-VINK--APPKEQPTKKCQLHNNKRE 520
           +    G      V +    PP+     + +     R 
Sbjct: 393 VRVARGDFGVRPVTDGVDTPPERDAPARGRFPAGSRT 429


>gi|87301423|ref|ZP_01084264.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 5701]
 gi|87284391|gb|EAQ76344.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 5701]
          Length = 400

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 12/361 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDN 60
              +  +    P YSVS+L+  +  ++E        +   +S  R     GH + +L D 
Sbjct: 11  ELAADASGQPLPRYSVSDLNRSIGSLLERGFAPRFLLEATVS--RPQLKKGHLWMTLLDE 68

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I A++W   L ++ F P +G   +V+GK+  +   +   +    + PS   ++L   
Sbjct: 69  TASISAVVWASALPRLSFTPADGDGVIVVGKLNFWGARASLCVQALDVRPS-LSSVLRQF 127

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ +++L   GLF    K P+P  P +IA++TS   + + D+L+  + R+P  ++++ P+
Sbjct: 128 ERVRERLEGSGLFDPSSKRPLPEFPTVIALLTSSPSSALADMLRTAAERWPATKILVVPI 187

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG      I  A+  +    +       + ++LARGGGS EDL  F+ E +   +   
Sbjct: 188 PVQG-AVQTSICTALELV---GQAAGRLGIEAVVLARGGGSREDLAVFDSEEVALTLGAL 243

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           ++P+++ +GHE D T+AD  AD RA TPT A    +P +  L+  L   +  L   +   
Sbjct: 244 NLPVVTGLGHEDDTTIADLVADYRAATPTAAIVALLPDRRTLRQELRQRQELLRQTLRWR 303

Query: 300 IKYK--INTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
           +  +     +        +    L   R     R       +   ++ R +        +
Sbjct: 304 VDREQQQLVVQRQRLLQHHPQALLQRYRTQLQQRRQLLEALSPRQLLKRGFCLVRGEAGQ 363

Query: 357 I 357
           +
Sbjct: 364 L 364



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 405 LREQTKNRIFYLHTHIKKLITR------------IEFILSHKIKSCHTSVSITTRILQSF 452
           LR++ + R   L   ++  + R            ++      ++   T +    ++L++ 
Sbjct: 285 LRQELRQRQELLRQTLRWRVDREQQQLVVQRQRLLQHHPQALLQRYRTQLQQRRQLLEAL 344

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           + +  LKRG+  ++      +     +     + + + DG A+  V+ +      P
Sbjct: 345 SPRQLLKRGFCLVRGEAGQLLRSIEQVEVGQGLRVQWLDGTADVRVLERRHENPDP 400


>gi|317490630|ref|ZP_07949100.1| exonuclease VII [Eggerthella sp. 1_3_56FAA]
 gi|316910254|gb|EFV31893.1| exonuclease VII [Eggerthella sp. 1_3_56FAA]
          Length = 388

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 13/364 (3%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
            SVS      K  +E     V + GE+S           YF++KD  + +  ++W     
Sbjct: 34  LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 91

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
                   G    + G+ T +    +    + S+  +G G L   +    +KL  EGL +
Sbjct: 92  ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 151

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193
              K P+P  P ++ ++TSP GA + D+L+ +  RFPL RV++  V V+G   P  I   
Sbjct: 152 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 211

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           +  +            +++++ RGGGS EDL  FNDE + R IA   +P+++ IGHE D 
Sbjct: 212 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 264

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           ++AD  ADLRA TPT AAE   P +E L        + L   + R +      +      
Sbjct: 265 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 324

Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
               D  L  +     LD     L   L   + R          R+ +  L  ++ ++R 
Sbjct: 325 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 383

Query: 372 HILE 375
            +  
Sbjct: 384 RLEH 387


>gi|329770466|ref|ZP_08261845.1| exodeoxyribonuclease VII [Gemella sanguinis M325]
 gi|328836321|gb|EGF85987.1| exodeoxyribonuclease VII [Gemella sanguinis M325]
          Length = 419

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 185/346 (53%), Gaps = 17/346 (4%)

Query: 11  DHPEYSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
           +    +V+ L+ ++  K I++  L  + ++GEIS ++ +H++ + YFS+KD ++RI+A+ 
Sbjct: 3   ERAYLTVTALNKYIEKKFILDPYLGEIYIKGEISNFK-LHNNNNIYFSIKDENTRINAVW 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           +           ++G   L+  KI  +    ++ +++  +     G L     + K+KL 
Sbjct: 62  FGAKNR----EFKDGDTVLIKSKINFYFPRGEHNLLVIDMKKDRIGELYQKFLELKEKLE 117

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187
           +EGLFS + K  IP   + IA+IT+ TGA I+D+ + I  RFP+ ++ ++   VQG+   
Sbjct: 118 KEGLFSSEFKKDIPKFSQKIALITAKTGAAIQDMTRTIQRRFPIAKINVYSTLVQGENSV 177

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           ++I   I+  ++          D+IIL RGGGSIEDLW FN E +VRAI N   PI++ I
Sbjct: 178 EDIVKNIILADS-------EDNDVIILGRGGGSIEDLWSFNTEEVVRAIFNCKTPIVTGI 230

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GHETD TL+D+ +D+RA TPT AAE+  P    +++ L     +LN  +  +++     +
Sbjct: 231 GHETDTTLSDFVSDVRASTPTAAAELVTPNIIDIKNRLSFNSDKLNRRMSYILEEYRTRI 290

Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
            +        N     +  + ++  L +EL   L  ++  K     
Sbjct: 291 ANSNSNPYFRNYTNIYNIYKEKVCLLEKELSKGLNNLLKDKKSELT 336



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 59/183 (32%), Gaps = 26/183 (14%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                  +  ++ +++       +    +I++ +  +     +  R +    +E    + 
Sbjct: 232 HETDTTLSDFVSDVRASTPTAAAELVTPNIIDIKNRLSFNSDKLNRRMSYILEEYRTRIA 291

Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---------- 448
                       N        +  L   +   L++ +K   + ++I+  I          
Sbjct: 292 NSNSNPYFRNYTNIYNIYKEKVCLLEKELSKGLNNLLKDKKSELTISKEIFQKIDVIGPY 351

Query: 449 ----------LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
                     L++ +  N LK+GY+     +N  IT  +++     I +   DG     V
Sbjct: 352 KEYFIKKVDSLEANSPINILKKGYSITYLNDNK-ITSVKSVNKNDNIFVRLSDGLLECNV 410

Query: 499 INK 501
           I+ 
Sbjct: 411 IDT 413


>gi|326331015|ref|ZP_08197314.1| exodeoxyribonuclease VII, large subunit [Nocardioidaceae bacterium
           Broad-1]
 gi|325951226|gb|EGD43267.1| exodeoxyribonuclease VII, large subunit [Nocardioidaceae bacterium
           Broad-1]
          Length = 410

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66
           ++       V +++  +   ++  L  V V G+++           + +L+D+ + I   
Sbjct: 4   DTSPESPAPVRQIANAIGGWIDK-LGAVWVEGQVAQLSRRPGMQTVFLTLRDSVADISVP 62

Query: 67  -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +  L+ +     EG   ++  K + +       +    + P G G LL  LE+R++
Sbjct: 63  VTCTRFLLDSLNPPLVEGASVIIHAKPSYYANRGTLSLQARDIRPVGLGELLARLEQRRQ 122

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+ + K P+PF+P  + ++T+   A  RD+L+    R+P +R  +    +QG 
Sbjct: 123 LLAAEGLFAAELKRPLPFLPTKVGLVTAANSAAERDVLENARRRWPQVRFEVAYAAMQGS 182

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++   + +L+        P  D+I++ARGGGS+EDL  F+DE ++RA+  +  PI+
Sbjct: 183 RSAADVVEKLQRLDR------DPEVDVIVVARGGGSVEDLLPFSDEHLIRAVHAARTPIV 236

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D AAD+RA TPT AA++ VP     Q  +     RL   I  LI  + 
Sbjct: 237 SAIGHEPDSPLLDLAADVRASTPTDAAKLVVPDVVEEQRIVATGRDRLRGGIAALIHREQ 296

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L++L     L +    +   R  +  L       +   + R      H   R ++   
Sbjct: 297 TLLDALRSRPVLADPRSLIDARRDEVTSLRDRARRTVGHALDRAADDIGHHRARARALSP 356

Query: 363 IHNIQK 368
           +  +++
Sbjct: 357 LETLRR 362



 Score = 98.3 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 6/136 (4%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ------TKNRIFYLHTHIKKLITRIEFI 430
           +Q I    +  LR        +   L             ++ I      +  L  R    
Sbjct: 273 EQRIVATGRDRLRGGIAALIHREQTLLDALRSRPVLADPRSLIDARRDEVTSLRDRARRT 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           + H +      +       ++ +   TL+RGY   QD + + +T   +      + I   
Sbjct: 333 VGHALDRAADDIGHHRARARALSPLETLRRGYAVAQDADGHVLTSVTDATEGAAVSIRLA 392

Query: 491 DGQANAIVINKAPPKE 506
           DG+  A + +      
Sbjct: 393 DGRLAATITSTEKDPA 408


>gi|224282537|ref|ZP_03645859.1| exodeoxyribonuclease VII large subunit [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313139691|ref|ZP_07801884.1| exonuclease VII [Bifidobacterium bifidum NCIMB 41171]
 gi|313132201|gb|EFR49818.1| exonuclease VII [Bifidobacterium bifidum NCIMB 41171]
          Length = 431

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + VS LS      VE       + G+I+      + G AY +++D   
Sbjct: 30  PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 87

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119
              I    W+   +K     ++G   +V GK   +   ++   I + +   GSG  L   
Sbjct: 88  DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 146

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +++ + KL  EGLF    K P+P  P  I +I +P      D++  +  R+P +R  I  
Sbjct: 147 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 206

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQG +CP+ I  AI +L+        P  D+II+ARGGGS EDL  F+DE +VRA A 
Sbjct: 207 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 260

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              PI+SAIGHE DWTL D AADLRA TPT AA+  VP        + N   R+   I  
Sbjct: 261 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 320

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +I  +        L      L   +  +D   R ++  L  I+         +   
Sbjct: 321 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 380

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 381 LTALSPQSTLDR 392



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 7/160 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       +K    + E+ Q I   +   +R     +      L 
Sbjct: 271 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 329

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     Q    +      +     R++  L+  +     +V      L + + ++T
Sbjct: 330 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 389

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           L RGY  +Q+ + + I     +     + +    G   A 
Sbjct: 390 LDRGYAVVQNADGHVIDDAGKVGAGDHLTLTLRKGVITAT 429


>gi|254431781|ref|ZP_05045484.1| exodeoxyribonuclease VII, large subunit [Cyanobium sp. PCC 7001]
 gi|197626234|gb|EDY38793.1| exodeoxyribonuclease VII, large subunit [Cyanobium sp. PCC 7001]
          Length = 407

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 11/335 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           +P S   +   P YSVS L+  L  ++E        +   +S  R     GH + +L D 
Sbjct: 14  SPASPSGAHSLPRYSVSSLNAALGSLMERGFAPRFLLDATVS--RPQLKKGHLWMTLVDE 71

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + I A++W     K+   P EG   +V+GK+  +   +   + +  L PS   +++   
Sbjct: 72  QASISAVVWASQRQKLSMEPAEGDGVVVVGKLNFWAARASLCVQVLDLRPS-LSSVMRRF 130

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+   +L  EGLF    K  +P  P+ IA++TS   + + D+L+  + R+P  RV++ P+
Sbjct: 131 EQVYGQLAAEGLFEPSRKRALPHAPQRIALLTSAPSSALADMLRTAAERWPSTRVLVVPI 190

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    +  A     L  L         + ++LARGGGS EDL  F+   + R +A +
Sbjct: 191 PVQGAVEAQICAT----LQRLYGRCHAEGIEALVLARGGGSREDLAVFDGATLGRVLAQA 246

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P++S IGHE D T+AD  AD RA TPT A    +P ++ ++  L  L   L  ++   
Sbjct: 247 PVPVVSGIGHEDDTTIADLVADYRAATPTAALVALLPERQAVRHGLQQLRRHLVQLVALR 306

Query: 300 IKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLP 332
           +  +   L    + L        L   R  L++  
Sbjct: 307 LHGERQQLGRFQERLQQLRPRDLLQQRRQSLEQAR 341



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +    +     +   ++  + ++ +     + ++      +++L  R        ++   
Sbjct: 281 LLPERQAVRHGLQQLRRHLVQLVALRLHGERQQLGRFQERLQQLRPR------DLLQQRR 334

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
            S+     +L++ + +  L+RG+  I+  +   +     L  +  + +   DGQA+A+V 
Sbjct: 335 QSLEQARALLRALSPEQVLQRGFALIRSPDGQVVRSVAALKPEEPVQLVLADGQADALVR 394

Query: 500 NKAPPKEQPTKK 511
              P    P  +
Sbjct: 395 EIHPGAPLPAAE 406


>gi|78213832|ref|YP_382611.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9605]
 gi|78198291|gb|ABB36056.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. CC9605]
          Length = 399

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 95/337 (28%), Positives = 164/337 (48%), Gaps = 9/337 (2%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKD 59
           + P +  ++   P YSV+EL+  +  ++E        +   +S  R     GH + +L D
Sbjct: 7   VTPTAVLSADRLPSYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTD 64

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             + I  ++W   L ++ + P++G    V+GK+  +   +   +    + PS   T+L  
Sbjct: 65  GSASISGVVWASKLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRD 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178
            E+ ++ L +EG+       P+P  P  IAV+TS   + + D+L+  + R+PL ++I+ P
Sbjct: 124 FERVRQVLEQEGVIDPSRLRPLPSQPASIAVLTSVPSSALADMLRTAAERWPLTQLIVVP 183

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           + VQG   P  I      L  + E         ++LARGGGS EDL  F++E + R +AN
Sbjct: 184 IPVQGSVAPTII----NTLEAIAERTAELGLQALVLARGGGSREDLAVFDNEALCRLLAN 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             IP+++ +GHE D T+AD  AD RA TPT A    +P +E  +  L   ++RL + ++ 
Sbjct: 240 YPIPVVTGLGHEDDLTVADLVADHRAATPTAAIVALLPDREAERQGLTQRQSRLKDTLLG 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
            I  +   L     AL          R R + + +  
Sbjct: 300 RILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQ 336



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 1/120 (0%)

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449
              E++        L++    RI      ++     ++      KI      +    ++L
Sbjct: 279 REAERQGLTQRQSRLKDTLLGRILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQLL 338

Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509
           ++ + +  LKRG   I +   + I    ++    ++ I   DG   A V    P     T
Sbjct: 339 KALSPERWLKRGLALISNKAGDPIPGLESVKIGDQLNIRMSDGSLEARVDQIQPSAPNTT 398


>gi|81299179|ref|YP_399387.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC
           7942]
 gi|81168060|gb|ABB56400.1| Exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC
           7942]
          Length = 450

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 116/374 (31%), Positives = 196/374 (52%), Gaps = 15/374 (4%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWKG 71
           SV+ +S +L+ ++  +  L  + + GE+S  +  H+ G  +FSLKD+ +   +D ++WK 
Sbjct: 49  SVAGVSDYLESLIGEDVRLRQLWIFGEVSSCK-PHAVG-LFFSLKDSQTTDLLDCVVWKN 106

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L +++  PE G + L++G +  +   S YQ+ +   +P G G      +K +++L  EG
Sbjct: 107 GLAQLQHRPEIGQQVLLLGTVRLYRKRSGYQLQVVQCLPFGDGLKALQRQKLEQRLQAEG 166

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K P+P  P+ IAV+TSP  A   DI + +  R P L+V++ P  VQGD+ P  I
Sbjct: 167 LFDRDRKRPLPLYPQTIAVVTSPQAAAWGDIQRSLRQRSPGLKVLLSPTLVQGDQAPAAI 226

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI ++          R +++ILARGGG+ EDL  F+DE +VRAIA   IP+++ +GHE
Sbjct: 227 ATAIARVVA------DGRAELLILARGGGAREDLECFDDEQVVRAIATCPIPVVTGLGHE 280

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D TLAD  AD  A TPT AA  +VP    L+ +   L  RL +   +  +     L   
Sbjct: 281 QDETLADRVADWAAHTPTAAAIRSVPAWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHC 340

Query: 311 LKALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      + L  ++++   L + L+    + + ++ +H +H+   +        +Q+
Sbjct: 341 QTRLGWPLLQRRLQQAQHQQQSLRQRLQQASRLQLAQERQHLDHLQELLAILNPESVLQR 400

Query: 369 NRQHILEKQQHIEQ 382
               +   +  I+Q
Sbjct: 401 GYALVRRDRTLIQQ 414



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 3/147 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + RQ   + +Q +    +Q  +    + +     L     Q + +         +  
Sbjct: 307 AWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHCQTRLGWPLLQRRLQQAQHQQQSLRQR 366

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
              +     ++      +     +L     ++ L+RGY  ++  +   I Q ++L    R
Sbjct: 367 L--QQASRLQLAQERQHLDHLQELLAILNPESVLQRGYALVRR-DRTLIQQVQDLQVGDR 423

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511
           + + + DG A   V       E  + +
Sbjct: 424 LSLQWADGTAGVCVETVTAAVENQSDR 450


>gi|84494717|ref|ZP_00993836.1| exodeoxyribonuclease VII large subunit [Janibacter sp. HTCC2649]
 gi|84384210|gb|EAQ00090.1| exodeoxyribonuclease VII large subunit [Janibacter sp. HTCC2649]
          Length = 414

 Score =  209 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 161/371 (43%), Gaps = 12/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P    ++     + V  LS  +   V+  +S + V G++        +  AY +L+D   
Sbjct: 11  PERAGDTTAEQPWPVRLLSMKIAEYVDK-MSTLWVEGQVVQLNRRPGARTAYLTLRDPDV 69

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +   I    L+ +     EG   +V  K T +       +    + P G G LL  +
Sbjct: 70  DMSLSVAIQVNALDAMGTPLTEGSRVVVQAKPTFWTQRGSLMLDGRQIRPVGVGELLARI 129

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  K+ L  EGLF    K P+PF+P+ I +I     A  +D+++    R+P  +  I  V
Sbjct: 130 EYLKRNLASEGLFDADRKRPLPFLPRRIGLICGRASAAEKDVVENSRRRWPTAQFEIRQV 189

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     E+  A      L E    P  D+I++ARGGG++EDL  F++E ++RA+A +
Sbjct: 190 AVQGANAVTEVTAA------LSELDGIPDVDVIVIARGGGNVEDLLPFSNEALIRAVAAA 243

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGH+ D  L D  AD RA TPT AA+  VP  +     +     R    +   
Sbjct: 244 RTPVVSAIGHDVDSPLLDLVADHRASTPTDAAKAIVPDADREHQVIEAARTRGRRALEGR 303

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           + ++   L  L     L +    +   R  +  L     H  +  + R      H+  ++
Sbjct: 304 LHHERRRLVELRSRPVLADPAAFVRVQREVVLALRARARHRTQAQLHRHQDGVAHLRAQV 363

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 364 RTLSPQSTLDR 374



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 38/131 (29%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R+H + +            R     ++        +       +      +  L  R   
Sbjct: 284 REHQVIEAARTRGRRALEGRLHHERRRLVELRSRPVLADPAAFVRVQREVVLALRARARH 343

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
               ++      V+     +++ + ++TL RGY  +Q  +   +     LA K  + +  
Sbjct: 344 RTQAQLHRHQDGVAHLRAQVRTLSPQSTLDRGYAIVQRVDGAIVHDPDELAIKELLHVTV 403

Query: 490 FDGQANAIVIN 500
             G        
Sbjct: 404 ARGDFGVRTEG 414


>gi|322387926|ref|ZP_08061533.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC
           700779]
 gi|321141199|gb|EFX36697.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC
           700779]
          Length = 216

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 91/217 (41%), Positives = 130/217 (59%), Gaps = 11/217 (5%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ + I A IW
Sbjct: 2   EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G   K+ F  EEG++  VIG++  +  S  Y IIIE   P G G L    E+ KKKL E
Sbjct: 60  SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLSE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF ++ K  IP   K I V+TSP+GAVI+DI+  +S RFP + ++++P KVQG+   +
Sbjct: 120 EGLFQERFKQAIPQFAKRIGVVTSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGEGAAE 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225
           EIA  I + N  ++       D++I+ RGGGSIEDLW
Sbjct: 180 EIARNIARANERED------LDVLIIGRGGGSIEDLW 210


>gi|67925867|ref|ZP_00519156.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501]
 gi|67852289|gb|EAM47759.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501]
          Length = 384

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 179/314 (57%), Gaps = 13/314 (4%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR-- 63
           N +     SV  L+ +++ ++E +  L  V V GE+S  +  H+ G  +F+L D+  +  
Sbjct: 2   NRIPETTLSVRGLTEYIQLLLEDDPQLIQVWVSGEVSSLKV-HTVG-LFFTLSDSEGKTT 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +  +IW    ++++ LP+ G E LV G I  +P   +YQ+ +  ++ +G G      ++ 
Sbjct: 60  LKCVIWNSQKSRLQELPKLGAEILVKGNIRLYPKKGEYQLTVFEVLATGDGLQALRYQQL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K +L +EGLF    K  +P  P+IIAVIT+ T A   DI + +S R P ++V+  P  VQ
Sbjct: 120 KTRLAKEGLFDQSIKRSLPSFPQIIAVITATTAAAWGDIQKTLSRRNPGVKVLFSPATVQ 179

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G + P  I  A+ ++N         R ++IILARGGG++EDL+ FNDE +VRAIA S IP
Sbjct: 180 GKDAPSSIVKAMERVN------NDGRAELIILARGGGAVEDLFCFNDERVVRAIAESPIP 233

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +I+ IGH+ D TLAD  AD+ A TPT AAEMAVP  E L+      + RL   I + +K 
Sbjct: 234 VITGIGHQRDETLADLVADVNAHTPTAAAEMAVPSYEVLKIEHQQRKQRLIASIQQRLKQ 293

Query: 303 KINTLNSLLKALPN 316
            +  L+ L   L +
Sbjct: 294 DLEQLDGLKNRLKS 307



 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAY 454
           E       L    + R+      +  L  R++ I  + +      +      + L++   
Sbjct: 275 EHQQRKQRLIASIQQRLKQDLEQLDGLKNRLKSIPLNAVSIREAKIKTLMLKQKLKALDP 334

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
              L+RG++ ++  +   +     L  +  ++I    G     V   
Sbjct: 335 HAVLERGFSVVRQIDEEIVRDVEQLNEEQELIIQLAQGSIKVKVTEI 381


>gi|88807160|ref|ZP_01122672.1| Exonuclease VII, large subunit [Synechococcus sp. WH 7805]
 gi|88788374|gb|EAR19529.1| Exonuclease VII, large subunit [Synechococcus sp. WH 7805]
          Length = 382

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 9/315 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           N+   P YSV EL+  +  ++E        V G  S  R     GH + +L D ++ I  
Sbjct: 2   NADSIPSYSVQELNASVGALLERGFAPRFLVHG--SALRPQIKKGHLWLTLSDGNASITV 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L ++ F+P EG    V+GK+  +   +   I    L PS   T+    E  K  
Sbjct: 60  VCWASRLQQLNFVPAEGEGVTVVGKLNFWATRASLAIQAIDLRPS-RSTIERRFEAVKAV 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L +EGL +   +  +P  P+ IA++TS   + + D+L+    R+PL  +++ P+ VQG+ 
Sbjct: 119 LSKEGLINPSRRRALPPAPERIALLTSVPSSALADMLRTARERWPLTELLVIPIPVQGEV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            P+  A        L +       + I+LARGGGS EDL  F+DE + R +A   +P+++
Sbjct: 179 GPRICAVLE----RLADQIEALHVNAIVLARGGGSREDLMVFDDEALCRTLAQYPVPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD RA TPT A    +P +      L     +L       +  +  
Sbjct: 235 GLGHEDDLTVADLVADFRAATPTAAIVTLLPNRNAALQYLNQCRTQLVQYQTWRLNREQE 294

Query: 306 TLNSLLKALPNSDQT 320
            L     AL   D  
Sbjct: 295 RLAQRRMALTRFDPI 309



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 10/111 (9%), Positives = 35/111 (31%), Gaps = 23/111 (20%)

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRIL-----------------------QSFAY 454
            ++ +  T++    + ++      ++     L                       Q+ + 
Sbjct: 272 QYLNQCRTQLVQYQTWRLNREQERLAQRRMALTRFDPIAVVADRRNRLDQRRRLLQALSP 331

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           +  L RG+ ++ D+    +      +    ++I+  DG+ +   +      
Sbjct: 332 ERWLARGFATVTDSEGRLLQSVAEASPSQPLVIHLSDGEIDVSTVEVRSRP 382


>gi|56751154|ref|YP_171855.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC
           6301]
 gi|56686113|dbj|BAD79335.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC
           6301]
          Length = 444

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 114/360 (31%), Positives = 191/360 (53%), Gaps = 15/360 (4%)

Query: 16  SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWKG 71
           SV+ +S +L+ ++  +  L  + + GE+S  +  H+ G  +FSLKD+ +   +D ++WK 
Sbjct: 49  SVAGVSDYLESLIGEDVRLRQLWIFGEVSSCK-PHAVG-LFFSLKDSQTTDLLDCVVWKN 106

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L +++  PE G + L++G +  +   S YQ+ +   +P G G      +K +++L  EG
Sbjct: 107 GLAQLQHRPEIGQQVLLLGTVRLYRKRSGYQLQVVQCLPFGDGLKALQRQKLEQRLQAEG 166

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           LF    K P+P  P+ IAV+TSP  A   DI + +  R P L+V++ P  VQGD+ P  I
Sbjct: 167 LFDRDRKRPLPLYPQTIAVVTSPQAAAWGDIQRSLRQRSPGLKVLLSPTLVQGDQAPAAI 226

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           A AI ++          R +++ILARGGG+ EDL  F+DE +VRAIA   IP+++ +GHE
Sbjct: 227 ATAIARVVA------DGRAELLILARGGGAREDLECFDDEQVVRAIATCPIPVVTGLGHE 280

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D TLAD  AD  A TPT AA  +VP    L+ +   L  RL +   +  +     L   
Sbjct: 281 QDETLADRVADWAAHTPTAAAIRSVPAWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHC 340

Query: 311 LKALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L      + L  ++++   L + L+    + + ++ +H +H+   +        +Q+
Sbjct: 341 QTRLGWPLLQRRLQQAQHQQQSLRQRLQQASRLQLAQERQHLDHLQELLAILNPESVLQR 400



 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + RQ   + +Q +    +Q  +    + +     L     Q + +         +  
Sbjct: 307 AWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHCQTRLGWPLLQRRLQQAQHQQQSLRQR 366

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
              +     ++      +     +L     ++ L+RG
Sbjct: 367 L--QQASRLQLAQERQHLDHLQELLAILNPESVLQRG 401


>gi|297559109|ref|YP_003678083.1| exodeoxyribonuclease VII large subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843557|gb|ADH65577.1| exodeoxyribonuclease VII, large subunit [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 410

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 14/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
           +S       V  +   +   +   L  + V G+I+          AY +L+D  +   + 
Sbjct: 4   DSSAEAPQPVRVVLNAVGQWI-GRLGRIWVEGQIAELNRRGR--MAYITLRDPVANVSVR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
            +     L+     PE G   +V  K   +     + +    +   G G LL  LE+ ++
Sbjct: 61  VVCQTSVLDAQSPPPEPGARVVVHAKPDFYEVRGTFSLRALEIRHVGLGELLARLEQLRR 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF    K P+PF+P  + +I     A  RD+L+    R+P +R  + PV VQGD
Sbjct: 121 TLTAEGLFDAARKRPLPFLPNTVGLICGRDSAAERDVLENGRRRWPAVRFEVRPVAVQGD 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
              +E+  A      LK+  + P  D+I++ARGGGS+EDL  F+DE +VRA+A++  P++
Sbjct: 181 RAVREVTEA------LKDLDSHPDVDVIVIARGGGSLEDLLPFSDEALVRAVASAGTPVV 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L D+ AD+RA TPT AA+  +P        +  L  R   ++   ++ ++
Sbjct: 235 SAIGHEQDAPLLDHVADVRASTPTDAAKKTIPDVGEQLEIIRQLRDRGRRVLRGGVEREL 294

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
             L  +     L +  + +     ++  L      +L + + R      H   R+ +   
Sbjct: 295 AWLEGVRSRPALASPVREVDRLAEQVADLRDRARRSLTVSLDRSADGLGHTRARLHALSP 354

Query: 363 IHNIQK 368
              + +
Sbjct: 355 ATTLAR 360



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 5/156 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410
             +++       +K    + E+ + I Q+  +  R +    + ++A L  +R +      
Sbjct: 250 ADVRASTPTDAAKKTIPDVGEQLEIIRQLRDRGRRVLRGGVERELAWLEGVRSRPALASP 309

Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +  L   +  L  R    L+  +      +  T   L + +   TL RGY  +Q  +
Sbjct: 310 VREVDRLAEQVADLRDRARRSLTVSLDRSADGLGHTRARLHALSPATTLARGYAIVQRED 369

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
            + +   R       + + F +    A V +     
Sbjct: 370 GSVVRSAREPDAGESLRVRFAEDSLTATVESVHTED 405


>gi|124007172|sp|Q6ADU9|EX7L_LEIXX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 435

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 14/385 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +         + V+ L+  ++  +E  L    V GEI+ +    S G+ Y  LKD    
Sbjct: 15  MAPGPPTLDDPWPVALLASKIRGWIER-LGTAWVEGEITQWGV--SGGNVYGKLKDLNED 71

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +   IW     +I    ++G   +   K   +       + +  +   G G LL  LE
Sbjct: 72  ATVGFTIWSSVKARIPADLKQGDRVIAAVKPNYWLKGGTLTMQVSDMRHVGLGDLLERLE 131

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + + +L  EGLF  + K  +PF+P  I ++T       +D+L+    R+P +R       
Sbjct: 132 RLRAQLRAEGLFRPERKKRLPFLPHTIGLVTGKDSDAEKDVLRNAQLRWPQVRFRTVYAA 191

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    E+  A      L+E    P  ++II+ARGGG  ++L  F+DE ++RA A  S
Sbjct: 192 VQGDRTVPEVTAA------LRELDADPEVEVIIVARGGGDFQNLLGFSDESLLRAAAGLS 245

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP        +    AR+   +  +I
Sbjct: 246 TPLVSAIGHEADRPLLDEVADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHII 305

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           +++I+ +  L     L +    +      L R        +E  + R+      +  +++
Sbjct: 306 RHEIDRIGHLRTRPALASGSWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLR 365

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQI 383
           +      +++    +      +   
Sbjct: 366 ALSPQATLERGYAIVQNAAGRVVAA 390



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 5/169 (2%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410
             +++       ++    + E+   + Q   +    +    + +I  +  LR +      
Sbjct: 265 ADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHIIRHEIDRIGHLRTRPALASG 324

Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +      + + + R   ++   +      V+     L++ + + TL+RGY  +Q+  
Sbjct: 325 SWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLRALSPQATLERGYAIVQNAA 384

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
              +         T + I    G   A      P   Q      L   +
Sbjct: 385 GRVVAAPGEAPAGTELRITVSGGSLAATAGKALPSPAQGATNGSLAAPR 433


>gi|126661055|ref|ZP_01732139.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. CCY0110]
 gi|126617666|gb|EAZ88451.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. CCY0110]
          Length = 384

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 119/317 (37%), Positives = 177/317 (55%), Gaps = 13/317 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SV+ L+ ++K ++E +  L  V V GE+S     H  G  +F+L D+   + I  ++W 
Sbjct: 9   LSVTGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HEHRVG-LFFTLSDSQGQATIKCVVWN 66

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++  LP+ G E LV+G +  +    +YQ+ +  ++ +G G      ++ K +L  E
Sbjct: 67  SQKERLLELPKLGSEILVMGNVRLYAKKGEYQLTVSQVLATGEGLQALRYQQLKNRLASE 126

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K  +P  PKIIAV+T+ T A   DI + +S R P ++V+  P  VQG E P  
Sbjct: 127 GLFEKHLKRSLPSFPKIIAVVTATTAAAWGDIQKTLSHRNPGVKVLFSPATVQGKEAPSS 186

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++N         R ++IILARGGG++EDL+ FNDE +VRAI+ SSIPII+ IGH
Sbjct: 187 IVKAIERVN------IDGRAELIILARGGGAVEDLFCFNDERVVRAISVSSIPIITGIGH 240

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D TLAD  AD+ A TPT AAEMAVP  E +       + RL   + + ++Y+ + L S
Sbjct: 241 QRDETLADLVADVNAHTPTAAAEMAVPSYEVMLIEHQQRKERLVASLKQRLRYESDQLAS 300

Query: 310 LLKALPNSDQTLSCSRY 326
           L   L N     +  R 
Sbjct: 301 LKNRLKNLSVNAASIRE 317



 Score = 90.6 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 2/122 (1%)

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +  +    +   E       L    K R+ Y    +  L  R++ +  +        
Sbjct: 260 AAAEMAVPSYEVMLIEHQQRKERLVASLKQRLRYESDQLASLKNRLKNLSVNAASIREAR 319

Query: 442 VSITT--RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           V        L++      LKRG++ ++ T+   I     L     + I    G     V 
Sbjct: 320 VKTLMLKEKLEALDPHAVLKRGFSVVRQTDGEIIRDSNQLIEGQELTIQLPQGTIKIKVT 379

Query: 500 NK 501
             
Sbjct: 380 EI 381


>gi|50955264|ref|YP_062552.1| exodeoxyribonuclease VII large subunit [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951746|gb|AAT89447.1| exodeoxyribonuclease VII large subunit [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 459

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 14/385 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +         + V+ L+  ++  +E  L    V GEI+ +    S G+ Y  LKD    
Sbjct: 39  MAPGPPTLDDPWPVALLASKIRGWIER-LGTAWVEGEITQWGV--SGGNVYGKLKDLNED 95

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +   IW     +I    ++G   +   K   +       + +  +   G G LL  LE
Sbjct: 96  ATVGFTIWSSVKARIPADLKQGDRVIAAVKPNYWLKGGTLTMQVSDMRHVGLGDLLERLE 155

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + + +L  EGLF  + K  +PF+P  I ++T       +D+L+    R+P +R       
Sbjct: 156 RLRAQLRAEGLFRPERKKRLPFLPHTIGLVTGKDSDAEKDVLRNAQLRWPQVRFRTVYAA 215

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD    E+  A      L+E    P  ++II+ARGGG  ++L  F+DE ++RA A  S
Sbjct: 216 VQGDRTVPEVTAA------LRELDADPEVEVIIVARGGGDFQNLLGFSDESLLRAAAGLS 269

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP        +    AR+   +  +I
Sbjct: 270 TPLVSAIGHEADRPLLDEVADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHII 329

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           +++I+ +  L     L +    +      L R        +E  + R+      +  +++
Sbjct: 330 RHEIDRIGHLRTRPALASGSWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLR 389

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQI 383
           +      +++    +      +   
Sbjct: 390 ALSPQATLERGYAIVQNAAGRVVAA 414



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 5/169 (2%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410
             +++       ++    + E+   + Q   +    +    + +I  +  LR +      
Sbjct: 289 ADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHIIRHEIDRIGHLRTRPALASG 348

Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +      + + + R   ++   +      V+     L++ + + TL+RGY  +Q+  
Sbjct: 349 SWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLRALSPQATLERGYAIVQNAA 408

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
              +         T + I    G   A      P   Q      L   +
Sbjct: 409 GRVVAAPGEAPAGTELRITVSGGSLAATAGKALPSPAQGATNGSLAAPR 457


>gi|295838738|ref|ZP_06825671.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB74]
 gi|295827164|gb|EFG65282.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB74]
          Length = 413

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 12/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66
           +       V E+S  +   V + L  V V G+++       +   + + +D+     I  
Sbjct: 5   TTPEAALPVREVSRLIGDWV-ARLGEVWVEGQLTQISRRPGARVVFLTFRDSSHDVSISL 63

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
             ++   + +  +  EG   +V  K   + G     +    + P G G LL  LE+ K++
Sbjct: 64  TCFRPVFDAVADVVTEGSRIVVRAKPEWYHGRGSLSLRAAEIRPVGIGELLVKLERLKRE 123

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K P+PF+P+ I ++T    A  RD+++    R+P +R     V VQG  
Sbjct: 124 LTAEGLFAADRKRPLPFLPRRIGLVTGRASAAERDVIKNAEARWPAVRFETREVAVQGVH 183

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              ++  A+       E    P  D+I++ARGGGS+EDL  F+D  ++R +A    P++S
Sbjct: 184 AVAQVVGAVR------ELDAHPDVDVIVVARGGGSVEDLLPFSDAELIRTVAACRTPVVS 237

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHE D  L D  ADLRA TPT AA+  VP        +     R    +  L+  +  
Sbjct: 238 AIGHEPDTPLLDLVADLRASTPTDAAKRVVPDVGEELERVRQARDRARQAVRALVVRESQ 297

Query: 306 --TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                    AL +  + ++     +          +  ++ R      H + R+ +    
Sbjct: 298 GLEQALAHSALRDPYRLVAGRDEEIGAEIGRARRTVGHLLDRADSDLAHTLARVVALSPA 357

Query: 364 HNIQK 368
             + +
Sbjct: 358 ATLGR 362



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 2/126 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + + +    Q V+  +       ++  A+ H         +      I   I R    
Sbjct: 275 ERVRQARDRARQAVRALVVRESQGLEQ--ALAHSALRDPYRLVAGRDEEIGAEIGRARRT 332

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           + H +    + ++ T   + + +   TL RGY  +Q  +   +     +A    +     
Sbjct: 333 VGHLLDRADSDLAHTLARVVALSPAATLGRGYAVLQRADGAAVRAPEEVAAGEELRARVA 392

Query: 491 DGQANA 496
           +G+   
Sbjct: 393 EGEFTV 398


>gi|302519266|ref|ZP_07271608.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB78]
 gi|318061126|ref|ZP_07979847.1| exodeoxyribonuclease VII large subunit [Streptomyces sp. SA3_actG]
 gi|318077027|ref|ZP_07984359.1| exodeoxyribonuclease VII large subunit [Streptomyces sp. SA3_actF]
 gi|333026905|ref|ZP_08454969.1| putative exodeoxyribonuclease VII large subunit [Streptomyces sp.
           Tu6071]
 gi|302428161|gb|EFK99976.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB78]
 gi|332746757|gb|EGJ77198.1| putative exodeoxyribonuclease VII large subunit [Streptomyces sp.
           Tu6071]
          Length = 409

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 171/409 (41%), Gaps = 12/409 (2%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66
           +       V E+S  +   V + L  V V G+++       +   + + +D+     I  
Sbjct: 5   TTPEAALPVREVSRLIGDWV-ARLGEVWVEGQLTQISRRPGARVVFLTFRDSSHDVSISL 63

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
             ++   + +  +  EG   +V  K   + G     +    + P G G LL  LE+ K++
Sbjct: 64  TCFRPVFDAVADVVTEGSRIVVRAKPEWYQGRGSLSLRASEIRPVGIGELLVKLERLKRE 123

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+   K P+PF+P+ I ++T    A  RD+++    R+P +R     V VQG  
Sbjct: 124 LTAEGLFAADRKRPLPFLPRRIGLVTGRASAAERDVIKNAEARWPAVRFETREVAVQGVH 183

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              ++  A+       E    P  D+I++ARGGGS+EDL  F+D  ++R +A    P++S
Sbjct: 184 AVSQVVGAVK------ELDAHPDVDVIVVARGGGSVEDLLPFSDAELIRTVAACRTPVVS 237

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHE D  L D  ADLRA TPT AA+  VP        +     R  + I  L+  + +
Sbjct: 238 AIGHEPDTPLLDLVADLRASTPTDAAKRVVPDVGEELERVRQTRDRARHAIRALVDREAH 297

Query: 306 --TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                     L +  + ++     +          +  ++ R      H + R+ +    
Sbjct: 298 GLEQALAHSVLRDPYRLVAGRDEEIGAEIDRARRTVGHLLDRADSDLAHTLARVVALSPA 357

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
             +++    +      + +  ++      L  +       + R + +  
Sbjct: 358 ATLRRGYAVLQRADGAVVRAPEEIAADEELRARVAEGEFTVRRTERRKD 406



 Score = 82.1 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 52/159 (32%), Gaps = 5/159 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI-----AILHMLRE 407
           ++  +++       ++    + E+ + + Q   +    I      +      A+ H +  
Sbjct: 250 LVADLRASTPTDAAKRVVPDVGEELERVRQTRDRARHAIRALVDREAHGLEQALAHSVLR 309

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      I   I R    + H +    + ++ T   + + +   TL+RGY  +Q 
Sbjct: 310 DPYRLVAGRDEEIGAEIDRARRTVGHLLDRADSDLAHTLARVVALSPAATLRRGYAVLQR 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            +   +     +A    +     +G+       +    E
Sbjct: 370 ADGAVVRAPEEIAADEELRARVAEGEFTVRRTERRKDDE 408


>gi|269219217|ref|ZP_06163071.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269211364|gb|EEZ77704.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 447

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/432 (21%), Positives = 177/432 (40%), Gaps = 11/432 (2%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + +  LS  ++  V + +S + V GE+   +    +   +F+L+D  +
Sbjct: 12  PQLAAQTTPDRPWPLRVLSMKIREYV-AAMSRLWVEGEVITLQRRPGAKVQFFTLRDLEA 70

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +   + K     +    E G   +V  K   +  +    +  + + P G G +L  +E+
Sbjct: 71  NVSITV-KIMAYLLPATIEPGSRAVVCAKPDFYEVNGSLSLWADEVRPVGLGDILARIEQ 129

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K +L  EGLFS + K  +PF+P  I +I         D+L  +  R+P  R  +  V+V
Sbjct: 130 LKSRLAAEGLFSAERKTKVPFLPGKIGLICGRNTKAREDVLVNVLGRWPAARFDVREVRV 189

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG+   + +  A+  L         P  D+++ ARGGGS+EDL  F+DE +VRA+A +  
Sbjct: 190 QGEGAVEAMIEALESL------EEAPGVDVVVFARGGGSVEDLLPFSDERLVRAVAKAKK 243

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  + D  ADLRA TPT AA+  VP      +++     R  + +   + 
Sbjct: 244 PVVSAIGHEGDSPILDLVADLRASTPTDAAKRIVPDVAEELATIAEAARRGRSAVQAGLD 303

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
              + L+S+     L   +  +      L  L R +  +++  I          +  +++
Sbjct: 304 RAQSELDSIRARPALAFPETIVDMREEDLLSLTRWMRTHVDRAIADAAGELAAAVANLRA 363

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 + +    +L +   +                 +  ++  +    +         
Sbjct: 364 LSPRATLDRGYSILLSEGSVVSNAAAARKGQEVEAILARGRLVLAVAAVAEQDGAVAEEG 423

Query: 420 IKKLITRIEFIL 431
           +      +    
Sbjct: 424 LAVNQDNLTAAA 435



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/165 (9%), Positives = 51/165 (30%), Gaps = 6/165 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       ++    + E+   I +  ++    +        + L  +R +    
Sbjct: 260 LVADLRASTPTDAAKRIVPDVAEELATIAEAARRGRSAVQAGLDRAQSELDSIRARPALA 319

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
             +  +      +  L   +   +   I      ++     L++ + + TL RGY+ +  
Sbjct: 320 FPETIVDMREEDLLSLTRWMRTHVDRAIADAAGELAAAVANLRALSPRATLDRGYSILLS 379

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512
              + ++          +      G+    V   A       ++ 
Sbjct: 380 E-GSVVSNAAAARKGQEVEAILARGRLVLAVAAVAEQDGAVAEEG 423


>gi|157364866|ref|YP_001471633.1| exodeoxyribonuclease VII, large subunit [Thermotoga lettingae TMO]
 gi|254783716|sp|A8F8T5|EX7L_THELT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|157315470|gb|ABV34569.1| exodeoxyribonuclease VII, large subunit [Thermotoga lettingae TMO]
          Length = 389

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/361 (27%), Positives = 180/361 (49%), Gaps = 17/361 (4%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             Y+VSE++Y+++ +++ +  LS + V GEI+  +    +GH +F LKD  + I  + + 
Sbjct: 3   KIYTVSEVTYYIEALIDQDQYLSDIQVVGEIADLKER--NGHLFFYLKDEFTTIGCVFFG 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLE 129
           G      F   +G    V G+I  +    +Y++I          GTL   +++  ++L+ 
Sbjct: 61  GAYRS--FGLSDGRIAQVAGQIKVYAPRGQYRLICRQAKILPERGTLFLRMKESYERLVA 118

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EG+F    + P+P  P  I +ITS   A  +D+L+ IS R+P + + ++   VQG++   
Sbjct: 119 EGIFDKPKR-PLPEYPSKIGLITSRNSAAYQDVLRTISDRYPLVEIFLYHTGVQGEDAKG 177

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            +  A+  +N           D++I+ RGGGS +DLW FNDE IVRA+     P+I+ +G
Sbjct: 178 SLLRALKDVNES-------DVDVVIITRGGGSRDDLWLFNDEDIVRAVYKLRHPVITGVG 230

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H+ D    D  AD  A TPT AA+ AVP    ++   + L  R+N  I + I+     + 
Sbjct: 231 HQIDTVFIDLVADYSAHTPTAAAQAAVPNLSEIRMHFLELMQRMNLSIRKKIESFSQQIE 290

Query: 309 SLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           S  K+L  S    +  +   +D +  +    ++  +F   +  +    ++ S   +  ++
Sbjct: 291 SSNKSLFQSMMSQILRTHSSIDSMKEKAFALMQRQMFSYEKKLSSAGTKLFSLNPVELLK 350

Query: 368 K 368
           K
Sbjct: 351 K 351



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 5/160 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL----RYIFLEKKEKI 399
            +    F  ++    +       Q    ++ E + H  +++++      + I    ++  
Sbjct: 231 HQIDTVFIDLVADYSAHTPTAAAQAAVPNLSEIRMHFLELMQRMNLSIRKKIESFSQQIE 290

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
           +    L +   ++I   H+ I  +  +   ++  ++ S    +S     L S      LK
Sbjct: 291 SSNKSLFQSMMSQILRTHSSIDSMKEKAFALMQRQMFSYEKKLSSAGTKLFSLNPVELLK 350

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           +GY  ++  +  ++     L  K  I + FFDG    +V 
Sbjct: 351 KGYVIVE-KDGKWVKSSSILREKDEISMRFFDGVVKVVVK 389


>gi|126661407|ref|ZP_01732468.1| Exonuclease VII, large subunit [Cyanothece sp. CCY0110]
 gi|126617314|gb|EAZ88122.1| Exonuclease VII, large subunit [Cyanothece sp. CCY0110]
          Length = 395

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 118/307 (38%), Positives = 174/307 (56%), Gaps = 13/307 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SV+ L+ ++K ++E +  L  V V GE+S     H  G  +F+L DN   + I  ++W 
Sbjct: 21  LSVTGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HEHRVG-LFFTLSDNQGQATIKCVVWN 78

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++  LP+ G E LV+G +  +    +YQ+ +  ++ +G G      ++ K +L  E
Sbjct: 79  SQKERLLELPKLGSEILVMGNVRLYAKKGEYQLTVFQVLATGEGLQALRYQQLKNRLASE 138

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K  +P  PKIIAV+T+ T A   DI + +S R P ++V+  P  VQG E P  
Sbjct: 139 GLFEKHLKRSLPSFPKIIAVVTATTAAAWGDIQKTLSHRNPGVKVLFSPATVQGKEAPSS 198

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++N         R ++IILARGGG++EDL+ FNDE +VRAIA SSIP+I+ IGH
Sbjct: 199 IVKAIERVN------IDGRAELIILARGGGAVEDLFCFNDERVVRAIALSSIPVITGIGH 252

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D TLAD  AD+ A TPT AAEMAVP  E +       + RL   + + ++ + + L S
Sbjct: 253 QRDETLADLVADVNAHTPTAAAEMAVPSYEVMLIEHQQRKERLVASLKQRLREESDQLAS 312

Query: 310 LLKALPN 316
           L   L N
Sbjct: 313 LKNRLKN 319



 Score = 87.1 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%)

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCH 439
              +  +    +   E       L    K R+      +  L  R++ +   +  ++   
Sbjct: 272 AAAEMAVPSYEVMLIEHQQRKERLVASLKQRLREESDQLASLKNRLKNLPVSATSLREAK 331

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
               +  + LQ+      LKRG++ ++ T+   I Q + L     + I    G     V 
Sbjct: 332 MKTVMLKQKLQALDPHAVLKRGFSVVRQTDGEIILQGKQLIEGQELTIQLPQGIIKVKVT 391

Query: 500 NKAP 503
              P
Sbjct: 392 EIWP 395


>gi|227487858|ref|ZP_03918174.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227542499|ref|ZP_03972548.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227092185|gb|EEI27497.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227181697|gb|EEI62669.1| exodeoxyribonuclease VII large subunit [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 411

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 14/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
            +++ +     +SVS ++  + + V   L    V GE+       +   +Y SLKD  + 
Sbjct: 1   MAKQTTSPDHPFSVSTINTLVGNWV-GRLGDAWVEGELIQVNIKPTWSFSYLSLKDLNDD 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +                  G   +V GK   +  + +Y +++  +   G G  L  +E
Sbjct: 60  ISMQLTCPTNIATAANIT--SGDRVIVHGKPRVYQRNGQYSLMVSEIRHVGIGEELARIE 117

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + ++ L  EGLF  + K P+P +P+ + +IT    A  RD+L+    R+P ++  I    
Sbjct: 118 QLRRDLAAEGLFRPELKKPLPVLPRCVGLITGQGSAAERDVLKVTHDRWPAVQFKIINTA 177

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     EI  A+ QL       T P  D+II+ARGGGS+EDL+ F+ E +VRA+A + 
Sbjct: 178 VQGQRAEPEIIAALAQL------DTDPDVDVIIIARGGGSVEDLFPFSREGLVRAVAAAQ 231

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P+ISAIGHE D  + D  AD  A TPT A +  VP        +  + +R  N +   +
Sbjct: 232 TPVISAIGHEPDQPILDNVADFAAKTPTDAGKNVVPDAMQEALMIQEMRSRAANALRSWV 291

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L ++     L N    +      +    +     +  +  ++ R    +  R+ 
Sbjct: 292 VREEEGLANIRSRPVLKNPYTIVEEQEAIISDCTQRARRCVAAVFAQEDRDIVSLRARVT 351

Query: 359 SDFLIHNIQK 368
           +      +Q+
Sbjct: 352 ALGPAATLQR 361



 Score = 75.6 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 5/110 (4%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               + +     +      I     R    ++         +      + +     TL+R
Sbjct: 302 RSRPVLKNPYTIVEEQEAIISDCTQRARRCVAAVFAQEDRDIVSLRARVTALGPAATLQR 361

Query: 461 GYTSIQ-----DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           GY+ +Q      ++ + +T        +++ I   DG   A  ++  P  
Sbjct: 362 GYSVVQVVPRDGSDTHVVTTIAETPPGSQLRIRVTDGSITAATMSTTPAD 411


>gi|158564341|sp|Q3AH76|EX7L_SYNSC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
          Length = 387

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 9/325 (2%)

Query: 13  PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           P YSV+EL+  +  ++E        +   +S  R     GH + +L D  + I  ++W  
Sbjct: 7   PSYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTDGSASISGVVWAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L ++ + P++G    V+GK+  +   +   +    + PS   T+L   E+ ++ L +EG
Sbjct: 65  KLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRDFERVRQVLEQEG 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +       P+P  P  IAV+TS   + + D+L+  + R+PL ++I+ P+ VQG   P  I
Sbjct: 124 VIDPSRLRPLPSQPASIAVLTSVPSSALADMLRTAAERWPLTQLIVVPIPVQGSVAPTII 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
                 L  + E         ++LARGGGS EDL  F++E + R +AN  IP+++ +GHE
Sbjct: 184 ----NTLEAIAERTAELGLQALVLARGGGSREDLAVFDNEALCRLLANYPIPVVTGLGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD  AD RA TPT A    +P +E  +  L   ++RL + ++  I  +   L   
Sbjct: 240 DDLTVADLVADHRAATPTAAIVALLPDREAERQGLTQRQSRLKDTLLGRILRERQRLQDR 299

Query: 311 LKALPNSDQTLSCSRYRLDRLPREL 335
             AL          R R + + +  
Sbjct: 300 AVALQQQSPREKIMRKRQELIQKHQ 324



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 1/120 (0%)

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449
              E++        L++    RI      ++     ++      KI      +    ++L
Sbjct: 267 REAERQGLTQRQSRLKDTLLGRILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQLL 326

Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509
           ++ + +  LKRG   I +   + I    ++    ++ I   DG   A V    P     T
Sbjct: 327 KALSPERWLKRGLALISNKAGDPIPGLESVKIGDQLNIRMSDGSLEARVDQIQPSAPNTT 386


>gi|257069425|ref|YP_003155680.1| Exodeoxyribonuclease VII large subunit [Brachybacterium faecium DSM
           4810]
 gi|256560243|gb|ACU86090.1| Exodeoxyribonuclease VII large subunit [Brachybacterium faecium DSM
           4810]
          Length = 479

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 179/374 (47%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P + + + ++P + + +LS  +   V + +S + V GEI        +G ++ +L+D   
Sbjct: 22  PTAAQTTAENP-WPLRQLSVKVGEYV-ARMSPLWVEGEIVQLNRRPGAGLSFMTLRDVDV 79

Query: 63  RIDAIIWK-----GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
            +    +        L  +   P  G   +V  K T +      Q+  + + P G G LL
Sbjct: 80  DMS---FSVPVREHVLRALPVEPVAGARVVVHAKPTFWTKRGSLQLEADDIRPVGLGELL 136

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             LE+ K+ L  EGLF+   K  +PF+P+++ +I     A  RD++     R+P ++  I
Sbjct: 137 ARLEQLKRVLAAEGLFASSRKQALPFLPRVVGLICGRESAAERDVVVNARRRWPAVQFEI 196

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG    +E++ A+ +L+ L +       D+II++RGGGS+EDL  F+DE + R +
Sbjct: 197 REVAVQGARAVREVSAALRELDELAQ------VDVIIISRGGGSLEDLLPFSDEQLTRLV 250

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  PI+SAIGHE D  L D AAD+RA TPT AA+  VP        L     RL   I
Sbjct: 251 AGARTPIVSAIGHEVDTPLIDLAADVRASTPTDAAKRVVPDIVAEVEQLDLGRTRLRAAI 310

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              I+ + + L+++     L N    L+     +          +   + R     +H+ 
Sbjct: 311 RARIEREQSALDAMRSRPVLENPSTILAGRADEIRSRISLARTLIGSRLDRAADEVDHLG 370

Query: 355 NRIKSDFLIHNIQK 368
            +++S   +  +++
Sbjct: 371 RQVRSLSPLATLER 384



 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 2/133 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +   +  +   +    R    +          + E     +      I+  I+    +
Sbjct: 297 EQLDLGRTRLRAAI--RARIEREQSALDAMRSRPVLENPSTILAGRADEIRSRISLARTL 354

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  ++      V    R ++S +   TL+RGY  +QD     + +         + +   
Sbjct: 355 IGSRLDRAADEVDHLGRQVRSLSPLATLERGYAVVQDAEGTIVREPEQSTVGQPLSVRVA 414

Query: 491 DGQANAIVINKAP 503
            G+         P
Sbjct: 415 GGRFGVERTTADP 427


>gi|33863908|ref|NP_895468.1| exonuclease VII, large subunit [Prochlorococcus marinus str. MIT
           9313]
 gi|33635491|emb|CAE21816.1| Exonuclease VII, large subunit [Prochlorococcus marinus str. MIT
           9313]
          Length = 385

 Score =  208 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 162/330 (49%), Gaps = 9/330 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +   P YSV +L+  +  ++E        V   +S  +     GH + +L D ++ I A
Sbjct: 2   TAESLPNYSVRDLNAAIGTLLERGFAPRFLVEASVS--KPQIKKGHLWLTLTDGNASITA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L ++ + P EG    V+GK+  +   +   + +  L PS   T+L   E  K  
Sbjct: 60  VAWASKLQQLTYRPAEGDGVTVVGKLNFWATRASLAVQVIDLRPS-LSTVLRQFEIVKAL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           LL+EGL  +  +  +P  P+++A++TS   + + D+L+    R+PL +++I P+ VQG  
Sbjct: 119 LLKEGLIDESKQKALPKYPEVVAILTSVPSSALADMLRTAKERWPLTQLLIIPIPVQG-G 177

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K+I + +    +L           I+LARGGGS EDL  F+DE + R +A+  IP+++
Sbjct: 178 VAKQIQSVLR---SLANQHDELGIAAIVLARGGGSREDLMVFDDEDLCRDLASFPIPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD RA TPT A    +P +E  Q+ L+    RL +    LI+ +  
Sbjct: 235 GLGHEDDQTVADLVADHRAATPTAAMVALLPSRESAQNVLMQRRHRLKDHCNWLIRKERE 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
            L    KAL            R+    +  
Sbjct: 295 RLVMRGKALECQQPLKQIELQRIHLSQKHQ 324



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 5/126 (3%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLITRIE-FIL 431
             H        +  +   ++    +L   R + K+     I      +      +E    
Sbjct: 249 ADHRAATPTAAMVALLPSRESAQNVLMQRRHRLKDHCNWLIRKERERLVMRGKALECQQP 308

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
             +I+     +S   ++LQ+ + +  L RG+  +++     +    N++    + I   D
Sbjct: 309 LKQIELQRIHLSQKHQLLQALSPELWLMRGFAIVKNKQGKTLRSVGNVSVLDNLTIQLSD 368

Query: 492 GQANAI 497
           GQ N  
Sbjct: 369 GQINTT 374


>gi|67920662|ref|ZP_00514182.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501]
 gi|67858146|gb|EAM53385.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501]
          Length = 406

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 117/307 (38%), Positives = 174/307 (56%), Gaps = 13/307 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWK 70
            SV  L+ +++ ++E +  L  V V GE+S  +  H+ G  +F+L D+  +  +  +IW 
Sbjct: 31  LSVRGLTEYIQLLLEDDPQLIRVWVSGEVSSLKV-HTVG-LFFTLSDSGGQTTLKCVIWN 88

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               +++ LP+ G E LV G I  +P   +YQ+ I  ++ +G G      ++ K +L +E
Sbjct: 89  SQKTRLQELPKLGTEILVKGNIRLYPKKGEYQLTIFEVLATGDGLQALRYQQLKTRLAKE 148

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K  +P  P+IIAVIT+ T A   DI +    R P ++V+  P  VQG E P  
Sbjct: 149 GLFDQSIKRSLPLFPQIIAVITATTAAAWGDIQKTSYQRNPGVKVLFSPATVQGKEAPSS 208

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++N         R ++IILARGGG++EDL+ FNDE +VRAIA S IP+I+ IGH
Sbjct: 209 IVKAIERVN------NDGRAELIILARGGGAVEDLFCFNDERVVRAIAQSPIPVITGIGH 262

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D TLAD  AD+ A TPT AAE+AVP  E L+      + RL   I + +K  +  L+ 
Sbjct: 263 QRDETLADLVADVNAHTPTAAAEIAVPSYEVLKIEHQQRKQRLIASIQQRLKQDLEQLDG 322

Query: 310 LLKALPN 316
           L   L +
Sbjct: 323 LKNRLKS 329



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAY 454
           E       L    + R+      +  L  R++ I  + +      +      + L++   
Sbjct: 297 EHQQRKQRLIASIQQRLKQDLEQLDGLKNRLKSIPLNAVSIREAKIKTLMLRQKLKALDP 356

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
              L+RG++ ++  +   +     L  +  ++I    G     V   
Sbjct: 357 HAVLERGFSVVRQIDEEIVRDVEQLNEEQELIIQLAQGSIKVKVTEI 403


>gi|256825840|ref|YP_003149800.1| Exodeoxyribonuclease VII large subunit [Kytococcus sedentarius DSM
           20547]
 gi|256689233|gb|ACV07035.1| Exodeoxyribonuclease VII large subunit [Kytococcus sedentarius DSM
           20547]
          Length = 413

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 166/371 (44%), Gaps = 12/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + +  L+  +   V+  +S + V G++        +   + +L+D  +
Sbjct: 9   PQKAAQTTAEAPWPLRTLARKIDEYVDR-MSALWVEGQLVEISRREGARWVWMTLRDTDA 67

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +  +   G ++ ++   ++G   ++  K   +  +    +   ++   G G LL  +
Sbjct: 68  DFSMRVMAPLGVVDGVQPPLQQGARVVMQAKPRFYTKNGSLSLSCRAIRHVGVGELLARV 127

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ KK+L  EG+F    K  +PF+P+ + ++     A  +D+++    R+P    +I  V
Sbjct: 128 EQLKKQLAAEGVFDAGRKRALPFLPRRVGLVCGRNSAAEKDVVENARRRWPATEFVIQNV 187

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG      +  A+       E +  P+ D+II++RGGGS EDL  F++E ++RA+A  
Sbjct: 188 VVQGPGAVTAVIAAVE------ELQRTPQVDVIIISRGGGSFEDLLPFSNEAMIRAVAAC 241

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +P +SAIGH+ D  L D  AD+RA TPT AA++ VP     +  +     RL   +   
Sbjct: 242 PVPTVSAIGHDVDTPLLDLVADVRASTPTDAAKLVVPDAAAEERGITQGRERLRRALTGR 301

Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +    T       + +    ++  R  L+R  +  E      +  + +        +
Sbjct: 302 LAAERQGLTAVRQRPVMADPTVMVTRPRAELERARQAGERAQARRLTGEQQRVTATRGHL 361

Query: 358 KSDFLIHNIQK 368
           ++   +  +++
Sbjct: 362 RALSPLGTLER 372



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 44/125 (35%), Gaps = 2/125 (1%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++ + + +    R     +         +       +      +++     E   + ++ 
Sbjct: 291 RERLRRALTG--RLAAERQGLTAVRQRPVMADPTVMVTRPRAELERARQAGERAQARRLT 348

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
                V+ T   L++ +   TL+RGY+ ++  + + +T +  +     + +   DG    
Sbjct: 349 GEQQRVTATRGHLRALSPLGTLERGYSVLRTPDGHVVTSRDEVEADQLLRVTVADGDFAT 408

Query: 497 IVINK 501
            V+  
Sbjct: 409 RVLGG 413


>gi|15644513|ref|NP_229565.1| exodeoxyribonuclease VII, large subunit [Thermotoga maritima MSB8]
 gi|14194739|sp|Q9X289|EX7L_THEMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|4982347|gb|AAD36832.1|AE001815_6 exodeoxyribonuclease VII, large subunit [Thermotoga maritima MSB8]
          Length = 394

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 18/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSV+E++ ++K ++E +  L++V V GEISG       GH +FSL + ++R++ +I+ G 
Sbjct: 6   YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +    +EG   LV G ++ +     Y+ I  ++       +     +   K L E  
Sbjct: 64  N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
              + K  +P  P+ I +ITS   A ++D+++    R  P+ + +F   VQGD   +E+ 
Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ + N           D++++ RGGGS EDLW FN+E ++R I     P+++ IGHE 
Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILRLRHPVVTGIGHEI 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D  +AD+ AD+   TPTGAAE  +P    +   L +   +L   +      +   L +L 
Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFFEKLITSLSNRFDMEERRLETLY 294

Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L        +       R+  L  +L   L        +  + +   ++S   +  ++
Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDYFEHNQKKLDSLGRMLESLNPLRPLE 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 87.5 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 1/130 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +    + +   +           +     L M+  +      +    +K+L  ++   
Sbjct: 266 EDLDSFFEKLITSLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L    +     +    R+L+S      L+RG+  ++  +   + +  +L     + + F 
Sbjct: 326 LMDYFEHNQKKLDSLGRMLESLNPLRPLERGFVLVK-KDEKIVKESTDLKRGDVVSLVFK 384

Query: 491 DGQANAIVIN 500
           DG   A VI 
Sbjct: 385 DGTKKAQVIG 394


>gi|320094362|ref|ZP_08026149.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978695|gb|EFW10251.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 435

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 175/370 (47%), Gaps = 12/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
               ++     + +  L+ ++K  V+  +S + V G++  ++    +   + +L+D    
Sbjct: 10  AKAADTTRDNPWPLRRLTENIKKYVDR-MSPLWVEGQVVEFKRRPGAKMHFLTLRDLQTD 68

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +    W G +++     +EG   +   K   +  + +  +    +   G G+LL  +E
Sbjct: 69  TSMTVTAWAGVMDQAGDGLQEGARVVTRVKPVFWERTGRLNLQAAEIHLQGVGSLLAQIE 128

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             +++L  EGLF++  K P+PF+P++I ++         D++   S R+P  R  I  V 
Sbjct: 129 ALRQRLAAEGLFNESRKKPLPFLPRVIGLVCGRAAKAEDDVVVNASDRWPGARFEIREVA 188

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD C  E+  A      L E    P  D+I++ARGGG++EDL  F+DE +VRA+A + 
Sbjct: 189 VQGDRCVAEVGAA------LAELDAAPGVDVIVIARGGGAVEDLLPFSDEALVRAVAAAR 242

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  AD RA TPT AA   VP + H +  +    AR+   +   I
Sbjct: 243 TPVVSAIGHEGDCPLLDLVADYRASTPTDAARRIVPDRAHEREGVAQAVARMRGAVANRI 302

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + ++L  +     L      +   R  L+RL   +   +E  +  + +    +   ++
Sbjct: 303 AAERSSLALVASRPVLTGPGAIVDGYRAALERLTSSMNQAVERRVNTEEQQLTRMRATLR 362

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 363 ALSPQATLDR 372



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 48/156 (30%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  +     Q           R         +     +       +      +++L + 
Sbjct: 279 DRAHEREGVAQAVARMRGAVANRIAAERSSLALVASRPVLTGPGAIVDGYRAALERLTSS 338

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  ++ +    ++     L++ + + TL RGY  ++  +   IT   ++     I 
Sbjct: 339 MNQAVERRVNTEEQQLTRMRATLRALSPQATLDRGYALLKTPSGALITSSSDVKKGDLIE 398

Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ 522
                G+  A V+   PP  +P       ++     
Sbjct: 399 GILASGRMVAQVVGATPPAPRPGSAPPGGSDPAGAP 434


>gi|152965090|ref|YP_001360874.1| exodeoxyribonuclease VII, large subunit [Kineococcus radiotolerans
           SRS30216]
 gi|151359607|gb|ABS02610.1| exodeoxyribonuclease VII, large subunit [Kineococcus radiotolerans
           SRS30216]
          Length = 427

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 91/377 (24%), Positives = 170/377 (45%), Gaps = 16/377 (4%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60
           + P +   +     + V  L+  +   + + +    V G++        +   + +L+D 
Sbjct: 13  LRPTTAGGTTAENPWPVRLLAAKMDAYI-AKMPWTWVEGQVVQVNDRPGASVVFVTLRDA 71

Query: 61  HS--RIDAIIWKGTLNKIEFLPEEGI----EFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
            +   +   I +  L ++     +G+      +V  +   F       +  + + P G G
Sbjct: 72  DTDMSLPVTITRRVLGRLRETLPDGLAHGTRVVVHARPEFFAKRGTLSLAADDVRPVGVG 131

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LR 173
            LL  LE  K+ L  EGLF    K  +PF+P+ + ++     A  RD+++    R+P +R
Sbjct: 132 ELLARLEHLKRVLRGEGLFDASRKRALPFLPRTVGLVCGRASAAERDVVENARLRWPSVR 191

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
             +  V VQG     E+  A+ +L+ L      P  D++++ARGGG++EDL  F++E ++
Sbjct: 192 FEVREVAVQGPNAVTEVVAALAELDAL------PEVDVVVIARGGGAVEDLLPFSNETLL 245

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
           RA+A +  P++SAIGHE D  L D  AD+RA TPT AA   VP      + L  L  R++
Sbjct: 246 RAVAAARTPVVSAIGHEVDSPLLDLVADVRASTPTDAARRVVPDAAEELARLEALRRRVH 305

Query: 294 NIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
             +   ++ + +TL +L     L      +      +D L       L+  + R     +
Sbjct: 306 QAVDTRVEREEHTLAALRSRPVLAAPHVLVDRRAQEVDDLRARARRGLDHRLERARVDVD 365

Query: 352 HIINRIKSDFLIHNIQK 368
           H+   +++      + +
Sbjct: 366 HLRTSVRALSPRSTLLR 382



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 58/156 (37%), Gaps = 5/156 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409
           ++  +++       ++      E+   +E + ++  + +    + +   L  LR +    
Sbjct: 270 LVADVRASTPTDAARRVVPDAAEELARLEALRRRVHQAVDTRVEREEHTLAALRSRPVLA 329

Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      +  L  R    L H+++     V      +++ + ++TL RGY  +Q 
Sbjct: 330 APHVLVDRRAQEVDDLRARARRGLDHRLERARVDVDHLRTSVRALSPRSTLLRGYAVVQR 389

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            +   +    +    TR+ +   DG+  A+     P
Sbjct: 390 PDGGLVRTPADAPAGTRLRVRLPDGEVAAVAAPTGP 425


>gi|170288848|ref|YP_001739086.1| exodeoxyribonuclease VII, large subunit [Thermotoga sp. RQ2]
 gi|226697619|sp|B1LAQ5|EX7L_THESQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|170176351|gb|ACB09403.1| exodeoxyribonuclease VII, large subunit [Thermotoga sp. RQ2]
          Length = 394

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSV+E++ ++K ++E +  L++V V GEISG       GH +FSL + ++R++ +I+ G 
Sbjct: 6   YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +    +EG   LV G ++ +     Y+ I  ++       +     +   K L E  
Sbjct: 64  N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
              + K  +P  P+ I +ITS   A ++D+++    R  P+ + +F   VQGD   +E+ 
Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ + N           D++++ RGGGS EDLW FN+E ++R I     P+++ IGHE 
Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWGFNEEDVIREILKLRHPVVTGIGHEI 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D  +AD+ AD+   TPTGAAE  +P    +   L +   +L   +      +   L +L 
Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294

Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L        +       R+  L  +L   L     +       +   ++S   +  ++
Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +    + +   +           +     L M+  +      +    +K+L  ++   
Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L    +     +    R+L+S      L+RG+  ++      + +  +L     + + F 
Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384

Query: 491 DGQANAIVIN 500
           DG   A VI 
Sbjct: 385 DGTKKAQVIG 394


>gi|222099932|ref|YP_002534500.1| Exodeoxyribonuclease 7 large subunit [Thermotoga neapolitana DSM
           4359]
 gi|221572322|gb|ACM23134.1| Exodeoxyribonuclease 7 large subunit [Thermotoga neapolitana DSM
           4359]
          Length = 393

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 18/362 (4%)

Query: 14  EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            Y+V+E+S ++K ++E +  L +V V GEI+        GH +FSL D ++++D +++ G
Sbjct: 5   VYTVTEISEYIKKLLEEDPYLVNVSVYGEITNV--RPRKGHIFFSLVDENAKLDCVLFGG 62

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               +    +EG   LV G I+ +     Y+ +  ++             +   K L E 
Sbjct: 63  DN--MGIRLQEGKMALVDGSISVYTPHGTYRFVCSNIRYLDHIGTYQMKFETTLKKLLEE 120

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190
               + K P+P  P+ I VITS + A   D+++    R  P+ + +F   VQGD   KE+
Sbjct: 121 GLLYRPKRPLPRFPRRIGVITSRSSAAFHDVIRTAKERKSPVEIYLFHTSVQGDSAKKEL 180

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
             A+ + N           D++++ RGGGS EDLW FN+E +VR I     P+++ IGHE
Sbjct: 181 IEALRKANE-------YDLDLVLIVRGGGSREDLWVFNEEEVVREILKMKHPVVTGIGHE 233

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D  +AD+ AD+   TPTGAAE  +P    +   L NL  R+ + ++  I  +   LN L
Sbjct: 234 IDRVIADFVADVSMHTPTGAAEYVLPDLRDVHEELKNLYERMKDAVLEKITREEERLNRL 293

Query: 311 LKAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
              +        +    +  R+  +  +L   +   + RK     H+   ++S      +
Sbjct: 294 FHYIKAAAKRKYEINKLTAIRVKEMAGKLRSLVLNSVRRKQERVEHLFRVLESLKPTRFL 353

Query: 367 QK 368
            K
Sbjct: 354 DK 355



 Score = 75.2 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
             +         +     + +  + ++ + ++    +  +   +   L+ L    K    
Sbjct: 243 ADVSMHTPTGAAEYVLPDLRDVHEELKNLYERMKDAVLEKITREEERLNRLFHYIKAAAK 302

Query: 415 YLHT-------HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
             +         +K++  ++  ++ + ++     V    R+L+S      L +G+  ++ 
Sbjct: 303 RKYEINKLTAIRVKEMAGKLRSLVLNSVRRKQERVEHLFRVLESLKPTRFLDKGFVLVK- 361

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVI 499
                + +  +L +   + + F DG+  A VI
Sbjct: 362 KEGKIVKEAASLNSGDIVFLIFRDGEKKARVI 393


>gi|72160872|ref|YP_288529.1| exodeoxyribonuclease VII large subunit [Thermobifida fusca YX]
 gi|123760890|sp|Q47SR1|EX7L_THEFY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|71914604|gb|AAZ54506.1| Exodeoxyribonuclease VII large subunit [Thermobifida fusca YX]
          Length = 406

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 163/365 (44%), Gaps = 14/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA-- 66
           S       V  +   +   +   L  + + G+++        G AY +L+D  + + A  
Sbjct: 5   SSPESPQPVRVVLQAVGGWI-GRLGRIWIEGQVAELHRR--GGMAYITLRDPVANVSARV 61

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
                 L   +  PE+G   +V  K   +     +      +   G G LL  LE+ ++ 
Sbjct: 62  TCSIRVLRAADPPPEQGARVVVYAKPDFYVPRGTFSFQALEIRHVGLGELLARLERLRQA 121

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF++  K  +PF+P ++ +I     A  RD+L+    R+P +R  +  V VQGD 
Sbjct: 122 LAAEGLFAESRKRKLPFLPGVVGLICGRDSAAERDVLENARRRWPAVRFEVREVAVQGDR 181

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+  A+       E    P  D+II+ARGGGS+EDL  F+DE +VRA+A +  P++S
Sbjct: 182 AVPEVMAALE------ELDAHPEVDVIIIARGGGSLEDLLPFSDEALVRAVAAARTPVVS 235

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHE D  L DY ADLRA TPT AA+  VP        +  L  R   ++   I  +  
Sbjct: 236 AIGHEQDTPLLDYVADLRASTPTDAAKKVVPDVGEQWELIRQLRDRARRVLEGGIAREEA 295

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L S+     L N  Q +     ++  L       L   + R   +  HI  R+ +    
Sbjct: 296 WLASMRSRPVLANPVQEVERKIEQVFDLRDRGRRALTAALDRAGDNLAHIRARLHALSPA 355

Query: 364 HNIQK 368
             + +
Sbjct: 356 TTLAR 360



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 3/128 (2%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  + I + +    ++++  +           +    +       +      +  L  R 
Sbjct: 270 EQWELIRQLRDRARRVLEGGIAREEAWLASMRSR--PVLANPVQEVERKIEQVFDLRDRG 327

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              L+  +     +++     L + +   TL RGY  ++  +   +     +A    + +
Sbjct: 328 RRALTAALDRAGDNLAHIRARLHALSPATTLARGYAIVRRADGTVVRSAAEVAPGEELRL 387

Query: 488 NFF-DGQA 494
            F  DG  
Sbjct: 388 RFAEDGLV 395


>gi|78485553|ref|YP_391478.1| exodeoxyribonuclease VII large subunit [Thiomicrospira crunogena
           XCL-2]
 gi|78363839|gb|ABB41804.1| Exodeoxyribonuclease VII large subunit [Thiomicrospira crunogena
           XCL-2]
          Length = 522

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/521 (18%), Positives = 181/521 (34%), Gaps = 72/521 (13%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59
           ++P +   +      S+S+L   ++  +  +    V V+ E++        GH Y  L +
Sbjct: 55  LSPGAVPANEKEKGISLSQLMTQVQSALRHSFPGAVWVKAEVANLNERR--GHVYLELSE 112

Query: 60  NH------SRIDAIIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIII 105
                   +   A+IW+  + ++   F  E G       + L++ ++        + +++
Sbjct: 113 TAESGQPIATCRAMIWQSNVTRLLERFALETGSDLKPGQKILLLAEVNFHEKFG-FSLVV 171

Query: 106 ESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL- 163
           + + PS   G L   L K +++L+ E L+      P P     +AVI  P  A + D   
Sbjct: 172 QDIDPSFTLGELEANLNKIRQQLIAEKLYDLNKAYPFPEDFFRVAVIAPPNAAGLGDFRA 231

Query: 164 --QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221
               +          F    QGD    E+  A    N L         D +I+ RGGG+ 
Sbjct: 232 DADLLQASSLCEFKYFYTAFQGDRVEAEMLAAFEAFNGLHAANP---FDALIIIRGGGAK 288

Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
            DL   N   + + IA ++IP+++ IGHE D TL D  A  R  TP+           H 
Sbjct: 289 LDLNPLNVYSLAKQIAQTTIPVLTGIGHERDNTLLDEVASTRFDTPSKVIAGI----RHA 344

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
             +      +   +I R  +  +              Q+L+     + R    +   L+ 
Sbjct: 345 IFNRAQKAQQHWLLIERASQLYVQK----------QKQSLADLEKTVQRQSLAITDKLKR 394

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
           ++             +               +  K+  + Q+ ++               
Sbjct: 395 VLAPLNYQIQRQSVSL---------------LQNKKHQLSQLNQEIH------------- 426

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
                 Q    +      + ++   I+      ++            + S   K  L RG
Sbjct: 427 -----YQVNGALSLQKQQLNQINQLIKTAPFTCLEQAKNKNKQWIGFILSSGPKTQLNRG 481

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           +  I+D     I   +    +++I I F DG   AI I++ 
Sbjct: 482 FAIIKDKQGTPIKTAQKARQQSQIDITFSDGVVQAIPIDET 522


>gi|330892576|gb|EGH25237.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 299

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 3/218 (1%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 32  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 89

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +   +    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 90  AQVRCALFRQSAAHVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 149

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             K KL +EGLFS + K  +P  P+ I +I+SPTGAVIRDI+     R P + + + P  
Sbjct: 150 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 209

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218
           VQG E   ++A    ++ +              L R G
Sbjct: 210 VQGREAINQMAATTQEVASHVNRAADATQQANELTRRG 247


>gi|317482887|ref|ZP_07941894.1| exonuclease VII [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915661|gb|EFV37076.1| exonuclease VII [Bifidobacterium sp. 12_1_47BFAA]
          Length = 459

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 54  PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 111

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 112 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 168

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 169 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 228

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 229 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 282

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 283 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 342

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 343 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 402

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 403 ASLTALSPQSTLNR 416



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 154 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 213

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 214 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 272

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 273 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 331

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 332 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 391

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++    I +    G  
Sbjct: 392 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 450


>gi|281412468|ref|YP_003346547.1| exodeoxyribonuclease VII, large subunit [Thermotoga naphthophila
           RKU-10]
 gi|281373571|gb|ADA67133.1| exodeoxyribonuclease VII, large subunit [Thermotoga naphthophila
           RKU-10]
          Length = 394

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSV+E++ ++K ++E +  L++V V GEISG       GH +FSL + ++R++ +I+ G 
Sbjct: 6   YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +    +EG   LV G ++ +     Y+ I  ++       +     +   K L E  
Sbjct: 64  N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
              + K  +P  P+ I +ITS   A ++D+++    R  P+ + +F   VQGD   +E+ 
Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ + N           D++++ RGGGS EDLW FN+E ++R I     P+++ IGHE 
Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILKLRHPVVTGIGHEI 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D  +AD+ AD+   TPTGAAE  +P    +   L +   +L   +      +   L +L 
Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294

Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L        +       R+  L  +L   L     +       +   ++S   +  ++
Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +    + +   +           +     L M+  +      +    +K+L  ++   
Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L    +     +    R+L+S      L+RG+  ++      + +  +L     + + F 
Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384

Query: 491 DGQANAIVIN 500
           DG   A VI 
Sbjct: 385 DGTKKAQVIG 394


>gi|311743711|ref|ZP_07717517.1| exodeoxyribonuclease VII large subunit [Aeromicrobium marinum DSM
           15272]
 gi|311312841|gb|EFQ82752.1| exodeoxyribonuclease VII large subunit [Aeromicrobium marinum DSM
           15272]
          Length = 405

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 15/370 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
            +   S D P   + ++S  +   +   L  V V  E++        G  +  L+D  ++
Sbjct: 1   MALDTSPDAPA-PLRQVSQLIGGYI-GRLGAVWVEAEVAQLNRRP--GICFLVLRDLEAK 56

Query: 64  ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           I   A      L+        G   +V  + + +  +    + I  + P+G G LL  LE
Sbjct: 57  ISVSAKCHASVLDAAAAPVTAGARVVVHARPSFYEPNGSLALDIREIRPAGEGELLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF  + K+P+P +P  + +IT    A  RD+LQ    R+P +R  +  V 
Sbjct: 117 RRKQLLAAEGLFDSRLKHPLPLLPGAVGLITGRDSAAERDVLQNARLRWPAVRFEVRHVL 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG    + +  A+       E    P  D+I++ARGGGS+EDL  F+DE +VRA+A   
Sbjct: 177 VQGAGSARAVIAAVA------ELDAHPDVDVIVIARGGGSVEDLLPFSDEALVRAVAACR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  + D  AD+RA TPT AA+  VP       ++  L  R    + ++I
Sbjct: 231 TPVVSAIGHEPDTPILDLVADVRASTPTDAAKRVVPDAREEAVAVAVLRDRAATAVRQMI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+S      L      +      +          +   + R      H + R++
Sbjct: 291 AQQQAGLDSCRSRPVLARPTTVVDEQTAAVLTARDRGRQAVLRRLDRAADEIGHHLARVR 350

Query: 359 SDFLIHNIQK 368
               +  +Q+
Sbjct: 351 GLSPLATLQR 360



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 2/96 (2%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +  +    +      +     R    +  ++      +      ++  +   TL+R
Sbjct: 301 RSRPVLARPTTVVDEQTAAVLTARDRGRQAVLRRLDRAADEIGHHLARVRGLSPLATLQR 360

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
           GY   Q  +   +T   ++    +  +   DGQ  A
Sbjct: 361 GYAVAQSDDGTVLTSVHDVP--EQFTVRLADGQVLA 394


>gi|318040571|ref|ZP_07972527.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CB0101]
          Length = 385

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 12/352 (3%)

Query: 13  PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           P YSV+EL+  +  ++E        +   +S  R     GH + +L D  + I  ++W  
Sbjct: 8   PRYSVAELNQAIASLLERGFAPRFLLEATVS--RPQLKKGHLWLTLVDEQASISGVVWAS 65

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L+K+   P EG   LV+GK+  +   +   + I  L PS    +L   E+ +  L  EG
Sbjct: 66  QLSKLSVQPSEGDGVLVVGKLNFWASRASLCVQILDLRPS-LSAVLRQFERVRCLLEPEG 124

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           L     K P+P +P  IA++TS   + + D+L+    R+P  R+ + P+ VQG    +  
Sbjct: 125 LLDPARKQPLPAMPAAIALLTSVPSSALADMLRTAQERWPATRIHVVPIPVQGPVEEQIR 184

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           +     L    E       + ++LARGGGS EDL  F+ E + R +A   +P+++ +GHE
Sbjct: 185 SRLAEVLARAGELG----IEALVLARGGGSREDLAVFDSEALARDLAACPLPVVTGLGHE 240

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD  AD RA TPT A    +P ++HL  +L      L   +   ++ +   L + 
Sbjct: 241 DDTTIADLVADYRAATPTAAVVALLPDRQHLGLALQQQRILLRQAVNNRLQQERLRLAAS 300

Query: 311 LKALP--NSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            + L   +  Q L+ +R +   R+      +   ++ R +   +    ++  
Sbjct: 301 QERLVALHPRQLLANARQQLQQRIELLHALSPRRLLERGFTLLHGADGQLVR 352



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 1/109 (0%)

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQSFAYKNT 457
                +LR+   NR+      +     R+  +     + +    +     +L + + +  
Sbjct: 276 QQQRILLRQAVNNRLQQERLRLAASQERLVALHPRQLLANARQQLQQRIELLHALSPRRL 335

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           L+RG+T +   +   +   R ++    + +   DG+ N +V    P  +
Sbjct: 336 LERGFTLLHGADGQLVRSVRQVSPGDALQVVLADGRINTVVQTTEPGAD 384


>gi|323359465|ref|YP_004225861.1| exonuclease VII, large subunit [Microbacterium testaceum StLB037]
 gi|323275836|dbj|BAJ75981.1| exonuclease VII, large subunit [Microbacterium testaceum StLB037]
          Length = 443

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/372 (27%), Positives = 163/372 (43%), Gaps = 14/372 (3%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD-- 59
           +    ++S      SVS L+  ++  +E     V V GEI+ +      G+ +  LKD  
Sbjct: 17  DSVHPRDSRTDTPTSVSRLNDTIRGFIER-WGSVWVEGEITSFNRR--GGNVFGRLKDLN 73

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             S +   IW  TL ++    + G   +   K   FP +  +   I +L   G G  L  
Sbjct: 74  TESTVAFRIWSSTLARLPKDFQVGDHVVACVKADYFPRTGDFSFAISALRHVGLGEQLER 133

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           LE+ + +L  EGLF    K  +PF+P  I +IT       +D+ +    R+P +      
Sbjct: 134 LERLRAQLRSEGLFDPVRKKKLPFLPHCIGLITGENSDAEKDVHRNAELRWPRVNFRTKY 193

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             VQGD C  E   A+  L+        P  D+II+ARGGG  + L  F+DE +VRA+A 
Sbjct: 194 AAVQGDRCVPETLAALKALDA------DPEVDVIIIARGGGDPQTLLGFSDERLVRAVAA 247

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +S P++SAIGHE D  L D  ADLRA TPT AA+  VP     ++ +  L ARL   + +
Sbjct: 248 ASTPVVSAIGHENDRPLLDDVADLRASTPTDAAKRVVPDVAEQRALVAQLRARLTGRLTQ 307

Query: 299 L--IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
                           +L      L+     L  L       ++  +  + R    +   
Sbjct: 308 RVLHDIAQLEQIRSRPSLRTPHAMLTSRAQELWMLSNRGRDIVDRRLESERRRTRELSAS 367

Query: 357 IKSDFLIHNIQK 368
           +++   +  + +
Sbjct: 368 LRALSPLATLAR 379



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q  L  Q       +   R +    + +              +      +  L  R   I
Sbjct: 290 QRALVAQLRARLTGRLTQRVLHDIAQLEQIRSRPSLRTPHAMLTSRAQELWMLSNRGRDI 349

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++S        +  L++ +   TL RGY   Q      +           + I   
Sbjct: 350 VDRRLESERRRTRELSASLRALSPLATLARGYAIAQVEGGAIVRDASQAPAGAALTITVE 409

Query: 491 DGQANAI 497
            G   A 
Sbjct: 410 RGSLAAR 416


>gi|227494770|ref|ZP_03925086.1| exodeoxyribonuclease VII [Actinomyces coleocanis DSM 15436]
 gi|226831770|gb|EEH64153.1| exodeoxyribonuclease VII [Actinomyces coleocanis DSM 15436]
          Length = 423

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 12/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P   +++     + +++LS ++K  VE  +S + V  +I       ++  ++ +L+D   
Sbjct: 10  PRLARDTTREHPWPLAKLSENIKIYVEK-MSPLWVEAQIVQLSDRGATKMSFLTLRDVDQ 68

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            I      +   L+        G   +   K T +  S +  +  + + P G G LL  +
Sbjct: 69  DISMEVSAFGNVLSTSGIPITPGSRVVAHVKPTFWTKSGRLALQAKEISPVGLGDLLARI 128

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  ++KL  EGLF ++ K P+PF+P+ I +I         D+L   S R+P  +  I  V
Sbjct: 129 ELLRQKLHAEGLFDEERKKPLPFLPRKIGLICGNNAKAKDDVLVNASTRWPAAQFEIREV 188

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG      +  A      L E    P  D+I++ARGGGS+EDL  F+DE IVRA+  +
Sbjct: 189 LVQGAGAVAGVTQA------LAELDRIPDVDVIVIARGGGSVEDLLPFSDEAIVRAVFAA 242

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  AD RA TPT AA   VP        L N    L   +   
Sbjct: 243 HTPVVSAIGHEGDSPLMDLVADYRASTPTDAARRVVPDLTAELQGLGNAVMELRKRVQTR 302

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           ++ +   L  LL    L     +L      L+    +L+H + + + +     N  ++ +
Sbjct: 303 VESEQQHLQLLLDRPVLATPAASLQSHFEGLETARAKLKHVVSLKLTQAQADLNSAVSTL 362

Query: 358 KSDFLIHNIQK 368
           K+      +++
Sbjct: 363 KAISPQATLER 373



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 55/162 (33%), Gaps = 5/162 (3%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
              ++   ++       ++    +  + Q +   V +  + +    + +   L +L ++ 
Sbjct: 258 LMDLVADYRASTPTDAARRVVPDLTAELQGLGNAVMELRKRVQTRVESEQQHLQLLLDRP 317

Query: 410 -----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                   +      ++    +++ ++S K+      ++     L++ + + TL+RGY+ 
Sbjct: 318 VLATPAASLQSHFEGLETARAKLKHVVSLKLTQAQADLNSAVSTLKAISPQATLERGYSI 377

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           I+      +T    +     +      G     V     P  
Sbjct: 378 IKAPGKGVLTDTSQVKKGEILEARLAHGSMIVTVFGTNAPPS 419


>gi|172055120|ref|YP_001806447.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. ATCC 51142]
 gi|171701401|gb|ACB54381.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. ATCC 51142]
          Length = 395

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 121/327 (37%), Positives = 180/327 (55%), Gaps = 13/327 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70
            SV+ L+ ++K ++E +  L  V V GE+S    +H  G  +F+L DN   + I  ++W 
Sbjct: 21  LSVAGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HVHRMG-VFFTLSDNKGQATIKCVVWN 78

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
              +++  LP+ G+E LV+G +  +    +YQ+ +  ++ +G G      ++ K +L  E
Sbjct: 79  SQKDRLLELPKLGVEILVMGNVRLYAKKGEYQLTVFQVLATGEGLQALRYQQLKNRLASE 138

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           GLF    K  +P  P+IIAV+T+ T A   DI + +S R P ++V+  P  VQG E P  
Sbjct: 139 GLFDTSLKRSLPSFPQIIAVVTAATAAAWGDIQKTLSQRNPGVKVLFSPATVQGKEAPSS 198

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI ++N         R ++IILARGGG++EDL+ FNDE +VRAI+ SSIP+I+ IGH
Sbjct: 199 IVKAIERVN------HDGRAELIILARGGGAVEDLFCFNDERVVRAISESSIPVITGIGH 252

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D TLAD  AD+ A TPT AAEMAVP  E L+        RL   I + ++ +   L S
Sbjct: 253 QRDETLADLVADVNAHTPTAAAEMAVPSYEVLRIEHQQRSYRLLASIKQRLRQESEQLAS 312

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELE 336
           L K L N        R    R     +
Sbjct: 313 LKKRLKNLPVNAVSLREAKMRTLMLKQ 339



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--KIKSCHTSVSITTRILQSF 452
           + E     + L    K R+      +  L  R++ +  +   ++       +  + L++ 
Sbjct: 285 RIEHQQRSYRLLASIKQRLRQESEQLASLKKRLKNLPVNAVSLREAKMRTLMLKQKLEAL 344

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
                L+RG++ ++  +   I + + L     + I    G+    V   
Sbjct: 345 DPHAVLERGFSVVRQIDGEIIRESKQLREGQELTIQLPQGKIKVKVTEI 393


>gi|46190970|ref|ZP_00206628.1| COG1570: Exonuclease VII, large subunit [Bifidobacterium longum
           DJO10A]
 gi|189440790|ref|YP_001955871.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           DJO10A]
 gi|189429225|gb|ACD99373.1| Exonuclease VII large subunit [Bifidobacterium longum DJO10A]
          Length = 452

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 47  PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 162 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 396 ASLTALSPQSTLNR 409



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++    I +    G  
Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 443


>gi|23466295|ref|NP_696898.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           NCC2705]
 gi|227546651|ref|ZP_03976700.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|322689750|ref|YP_004209484.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. infantis 157F]
 gi|322691699|ref|YP_004221269.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|23327047|gb|AAN25534.1| exonuclease VII, large subunit [Bifidobacterium longum NCC2705]
 gi|227212968|gb|EEI80847.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|320456555|dbj|BAJ67177.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320461086|dbj|BAJ71706.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 456

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 51  PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 108

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 109 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 165

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 166 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 225

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 226 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 279

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 280 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 339

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 340 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 399

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 400 ASLTALSPQSTLNR 413



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 151 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 210

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 211 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 269

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 270 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 328

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 329 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 388

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++    I +    G  
Sbjct: 389 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 447


>gi|291516292|emb|CBK69908.1| Exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. longum F8]
          Length = 452

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 47  PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 162 AMIDELRKQLNGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 396 ASLTALSPQSTLNR 409



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +        N E +  A     +P             A    D+
Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLNGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++    I +    G  
Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 443


>gi|312134043|ref|YP_004001382.1| xsea [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773350|gb|ADQ02838.1| XseA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 454

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+       +G AY +L+D+  
Sbjct: 47  PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTR-RTGSAYITLRDDFE 104

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 162 AMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPNVDVIIVARGGGSFEDLIGFSDERVVRAA 275

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLQV 335

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               + +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 336 RSRAENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 396 ASLTALSPQSTLNR 409



 Score = 92.5 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDLWH-----FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPNVDVIIVARGGGSFEDLIG 265

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 325 EGAIDRMRLQVRSRAENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++T   I +    G  
Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASRVSTGDDITVTLKKGVI 443


>gi|260435825|ref|ZP_05789795.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 8109]
 gi|260413699|gb|EEX06995.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 8109]
          Length = 387

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 9/325 (2%)

Query: 13  PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
           P YSV+EL+  +  ++E        +   +S  R     GH + +L D  + I +++W  
Sbjct: 7   PTYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTDGSASISSVVWAS 64

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L ++ + P++G    V+GK+  +   +   +    + PS   T+L   E+ ++ L +E 
Sbjct: 65  KLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRDFERVRQLLEQEE 123

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190
           +   + + P+P  P  IAV+TS   + + D+L+  + R+PL ++I+ P+ VQG   P  I
Sbjct: 124 VIDPRRRRPLPSQPSSIAVLTSVPSSALADMLRTAAERWPLTQLIVVPIPVQGSVAPTII 183

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           +       +L E  T      ++LARGGGS EDL  F++E++ R +A+  IP+++ +GHE
Sbjct: 184 STLE----SLAERSTELGLQALVLARGGGSREDLAVFDNEVLCRLLAHYPIPVVTGLGHE 239

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D T+AD  AD RA TPT A    +P +E     L+  ++RL   ++  I  +   L   
Sbjct: 240 DDLTVADLVADHRAATPTAAIVALLPDREAEHQGLVQRQSRLKEALLGRIHRERQRLQDR 299

Query: 311 LKALPNSDQTLSCSRYRLDRLPREL 335
             AL          R+R +   +  
Sbjct: 300 AIALQQQSPLEKIRRFRQELAQKHQ 324



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 1/120 (0%)

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449
              E +  +     L+E    RI      ++     ++      KI+     ++   ++L
Sbjct: 267 REAEHQGLVQRQSRLKEALLGRIHRERQRLQDRAIALQQQSPLEKIRRFRQELAQKHQLL 326

Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509
           ++ + +  LKRG   I +     I+   ++    ++ I   DG   A V          T
Sbjct: 327 KALSPERWLKRGLALISNEAGESISSLESVKIGDQLNIRVSDGNLEARVDQIQRSDPNTT 386


>gi|282880818|ref|ZP_06289514.1| exodeoxyribonuclease VII, large subunit [Prevotella timonensis CRIS
           5C-B1]
 gi|281305352|gb|EFA97416.1| exodeoxyribonuclease VII, large subunit [Prevotella timonensis CRIS
           5C-B1]
          Length = 431

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/505 (18%), Positives = 172/505 (34%), Gaps = 98/505 (19%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            ++ EL+  +   +++ +     V  E+S  R +   GH Y  L  KD       ++  A
Sbjct: 5   LTLYELNELVSETLQTVMPDEYWVEAELSEVREVR--GHCYMELVQKDEQTNTPIAKASA 62

Query: 67  IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
             WK     +              G++ L+            +  II  + P    G + 
Sbjct: 63  KCWKNKWMLMRPYFERMTGQSLRAGMKVLLKVYANFHEAYG-FSWIITDIDPVYTMGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174
              ++   +L  EG+F  Q +  +P   + +AV++S   A   D L+++          V
Sbjct: 122 RKRQEIIAQLKAEGVFDLQKELTLPLFAQRVAVVSSEQAAGYGDFLRQLQDNDAGLCFDV 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + + NA+ Q+N           D++++ RGGG+  DL  F+  ++  
Sbjct: 182 QLFPAVMQGEKVEQSVINALNQIN-----NQVDNFDVVVIIRGGGATSDLSGFDTILLAE 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGH+ D ++ D  +  R  TPT AA   V    +    + + E  +  
Sbjct: 237 NVANFPLPIITGIGHDRDESVLDMISFQRVKTPTAAAAYLVEHLRNTWHRIDDAEQEIIQ 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
           I+   ++ + N  + L   +P     +   +                          H+ 
Sbjct: 297 IVRHAMELEKNRFDLLTSKIPFLFSRVKLQQ------------------------LTHLQ 332

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                 QQ +    + H+       +   A L    ++    + 
Sbjct: 333 QC--------------------QQRLTTSARLHVHKAQQHIEVHSARLFPTIQRL---LL 369

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               H+  L  R                     +L     +  LKRGY+         + 
Sbjct: 370 DTRHHLNLLEQR-------------------CSLLD---PQLLLKRGYSITLH-QGRAVR 406

Query: 475 QKRNLATKTRILINFFDGQANAIVI 499
               L     I      G   + V 
Sbjct: 407 NAHQLKAGDEIETRVEKGIIKSTVK 431


>gi|283456549|ref|YP_003361113.1| exodeoxyribonuclease VII large subunit XseA [Bifidobacterium
           dentium Bd1]
 gi|283103183|gb|ADB10289.1| xseA Exodeoxyribonuclease VII large subunit [Bifidobacterium
           dentium Bd1]
          Length = 439

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+      + G AY +L+D++ 
Sbjct: 27  PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 84

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 85  DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 141

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 142 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 201

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI  ++        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 202 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 255

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 256 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 315

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              I  ++  +        L      L   +  LD     +   L  I+           
Sbjct: 316 DATIANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 375

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 376 ASLTALSPQSTLNR 389



 Score = 94.1 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 57/169 (33%), Gaps = 5/169 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399
                    ++  +++       +K    + E+ Q    H++++  +    I  E +   
Sbjct: 268 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATIANEMRLVE 327

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              +     Q    +      +    +R+   L+  +     ++  +   L + + ++TL
Sbjct: 328 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 387

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            RGY  IQ  + + I    N+     + +    G   + V      + Q
Sbjct: 388 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 436


>gi|212715439|ref|ZP_03323567.1| hypothetical protein BIFCAT_00335 [Bifidobacterium catenulatum DSM
           16992]
 gi|225351561|ref|ZP_03742584.1| hypothetical protein BIFPSEUDO_03157 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|212661614|gb|EEB22189.1| hypothetical protein BIFCAT_00335 [Bifidobacterium catenulatum DSM
           16992]
 gi|225157905|gb|EEG71188.1| hypothetical protein BIFPSEUDO_03157 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 426

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 163/372 (43%), Gaps = 15/372 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-- 60
           P     +     + VS LS      VE     V V G+I+        G AY +L+D+  
Sbjct: 20  PRLAGETTADNPWPVSLLSEKFHMAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDYQ 77

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTA 119
              ++   + G          +G   ++ GK   +   +   +  +++I +G+G +L   
Sbjct: 78  DIALEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLKAM 136

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178
           +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +  
Sbjct: 137 IDELRKKLKGEGLFDADRKQPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVDFKVTH 196

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG++CP ++  AI Q++        P  D+II+ARGGG+ EDL  F+DE +VRA A 
Sbjct: 197 VHVQGEQCPSDVIKAIAQMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAAAA 250

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I  
Sbjct: 251 AHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVREQMQLINVNIERMRMRIDA 310

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   +        L      L   +  +D     +   L  I+             
Sbjct: 311 TVNNETRLIEGYANRPSLTQPLTMLEPHQRLIDDARTRMRIGLTRILDDASLTIEKAHAS 370

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 371 LTALSPQSTLNR 382



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 7/176 (3%)

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               +  I          ++  +++       +K    + E Q  +  +  + +R     
Sbjct: 252 HTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVRE-QMQLINVNIERMRMRIDA 310

Query: 395 KKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                  L           Q    +      I    TR+   L+  +     ++      
Sbjct: 311 TVNNETRLIEGYANRPSLTQPLTMLEPHQRLIDDARTRMRIGLTRILDDASLTIEKAHAS 370

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
           L + + ++TL RGY  +Q  + + I     + T  ++ +    G   + V      
Sbjct: 371 LTALSPQSTLNRGYAVVQGADGHVIDDANAVNTGDQLTMTLKHGVIVSEVTTVTKE 426


>gi|296454675|ref|YP_003661818.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. longum JDM301]
 gi|296184106|gb|ADH00988.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 458

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 51  PARAAETSAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 108

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 109 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 165

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 166 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 225

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 226 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 279

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 280 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 339

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 340 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 399

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 400 ASLTALSPQSTLNR 413



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 87/299 (29%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 151 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 210

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 211 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 269

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 270 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 328

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 329 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 388

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q ++ + +     ++T   I +    G  
Sbjct: 389 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSSDGHVLDDASRVSTGDDITVTLKKGVI 447


>gi|213691511|ref|YP_002322097.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213522972|gb|ACJ51719.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320457587|dbj|BAJ68208.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 452

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 47  PARAAETSAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 162 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   +
Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              ++ +I  +        L      L   +  +D   + L+  L  I+           
Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 396 ASLTALSPQSTLNR 409



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q ++ + +     ++    I +    G  
Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSSDGHVLDDASQVSPGDDITVTLKKGVI 443


>gi|124021951|ref|YP_001016258.1| exonuclease VII, large subunit [Prochlorococcus marinus str. MIT
           9303]
 gi|123962237|gb|ABM76993.1| Exonuclease VII, large subunit [Prochlorococcus marinus str. MIT
           9303]
          Length = 385

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 9/330 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
            +   P YSV +L+  +  ++E        V   +S  +     GH + +L D ++ I A
Sbjct: 2   TAESLPNYSVRDLNAAIGTLLERGFAPRFLVEASVS--KPQIKKGHLWLTLTDGNASITA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L ++ + P EG    V+GK+  +   +   + +  L PS   T+L   E  K  
Sbjct: 60  VAWASKLQQLTYRPAEGDGVTVVGKLNFWATRASLAVQVIDLRPS-LSTVLRQFEIVKAL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           LL+EG+  +  +  +P  P++IA++TS   + + D+L+    R+PL +++I P+ VQG  
Sbjct: 119 LLKEGIIDESKRKALPKYPEVIAILTSVPSSALADMLRTAKERWPLTQLLIIPIPVQG-G 177

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K+I + +    +L           I+LARGGGS EDL  F+DE + R +A+  IP+++
Sbjct: 178 VAKQIQSVLR---SLANQHDELGIAAIVLARGGGSREDLMVFDDEDLCRDLASFPIPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD RA TPT A    +P +E  Q+ L+    RL +    LI+ ++ 
Sbjct: 235 GLGHEDDQTVADLVADHRAATPTAAMVALLPSRESAQNVLVQRRHRLKDHCNWLIRKELE 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
            L    KAL            R+    +  
Sbjct: 295 RLVDRGKALERQQPLKQIELQRIHLSQKHQ 324



 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 52/136 (38%), Gaps = 5/136 (3%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL-HTHIKKLITRIEFILSHK- 434
             H        +  +   ++    +L   R + K+   +L    +++L+ R + +   + 
Sbjct: 249 ADHRAATPTAAMVALLPSRESAQNVLVQRRHRLKDHCNWLIRKELERLVDRGKALERQQP 308

Query: 435 ---IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491
              I+     +S   ++LQ+ + +  L RG+  +++     +    +++    + I   D
Sbjct: 309 LKQIELQRIHLSQKHQLLQALSPELWLMRGFAIVKNKQGKTLQSVGDVSLLDNLTIQLSD 368

Query: 492 GQANAIVINKAPPKEQ 507
           GQ NA        +  
Sbjct: 369 GQINATAEEINQQRPS 384


>gi|289761247|ref|ZP_06520625.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis GM 1503]
 gi|289708753|gb|EFD72769.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis GM 1503]
          Length = 274

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 11/277 (3%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65
           +NS ++P + V  ++  +   ++  L  V V G+++       +   +  L+D  + +  
Sbjct: 3   QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60

Query: 66  -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
                +  +        EG++ +V GK + + G   + + +  +   G G LL  +++ +
Sbjct: 61  TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120

Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183
           + L  EGLF  + K PIP++P +I +IT    A  RD+    S R+P  R  +  V VQG
Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
                +I  A      L+E    P  D+I+LARGGGS+EDL  F+DE + RAIA    P+
Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280
           +SA+GHE D  L D   DLRA TPT AA+  VP  + 
Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPTPQP 271


>gi|119026235|ref|YP_910080.1| exodeoxyribonuclease VII large subunit [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765819|dbj|BAF39998.1| exonuclease VII, large subunit [Bifidobacterium adolescentis ATCC
           15703]
          Length = 426

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+        G AY +L+D+  
Sbjct: 20  PRLASETTADNPWPVSLLSEKFYTAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDQQ 77

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 78  DI--AMEVNGF-GRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLRGDAIIAAGAGGSLK 134

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 135 AMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVGFKV 194

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI QL+        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 195 THVHVQGEQCPSDVVAAIRQLDA------DPDVDVIIVARGGGAFEDLIGFSDENVVRAA 248

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 249 AAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVNLDRMRVRI 308

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              +  +   +        L      L   +  LD     +   L  I+           
Sbjct: 309 DATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDASLTIEKAH 368

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 369 ASLTALSPQSTLDR 382



 Score = 93.7 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 6/142 (4%)

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              +Q  + ++   +  I+  V    R I                Q    +      +  
Sbjct: 291 HEQMQLIQVNLDRMRVRIDATVSNETRLIEGYANR------PSLTQPLTMLEPHQRFLDD 344

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             TR+   L+  +     ++      L + + ++TL RGY  +Q  + + +     + T 
Sbjct: 345 ARTRMRIGLTRILDDASLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTG 404

Query: 483 TRILINFFDGQANAIVINKAPP 504
            ++ +    G   + V      
Sbjct: 405 DQLTMTLKHGIVVSEVKTVTKE 426


>gi|163839901|ref|YP_001624306.1| exodeoxyribonuclease VII large subunit [Renibacterium salmoninarum
           ATCC 33209]
 gi|162953377|gb|ABY22892.1| exodeoxyribonuclease VII large subunit [Renibacterium salmoninarum
           ATCC 33209]
          Length = 433

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + +  LS  LK  ++       V G++       +   +Y +L+D  +
Sbjct: 23  PTTAAETTADRPWPLRMLSEKLKAHIDRA-PAAWVEGQVIELNRRANI--SYLTLRDVDA 79

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            I     ++   L+ +    E G   +   K   +  + +  +    +   G G LL  +
Sbjct: 80  EISLSVTLFGSALDAMAVPLERGARVVAQLKPDFWMKTGRLSMQGRQIKAVGLGDLLARI 139

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  ++ L  EG+F  + K  +P +P  I +IT      ++D+L+  + R+P ++  +  V
Sbjct: 140 EALRQALAAEGIFDAERKKKLPLLPNRIGLITGRDSDAMKDVLRNATLRWPAVQFEVREV 199

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +++ A      L E     R D+I++ARGGGS+EDL  F++E ++RA++ +
Sbjct: 200 AVQGVNSVSQVSAA------LAELDADDRVDVIVIARGGGSLEDLLGFSNETLIRAVSAA 253

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  ADLRA TPT AA+  VP        +     +L   +   
Sbjct: 254 HTPVVSAIGHEADRPLLDEVADLRASTPTDAAKRIVPDLAEELGLVNQARYQLQRSLTLF 313

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  + + L  L     L   D  ++  R  L RL      ++  ++ R      H+++++
Sbjct: 314 LHREQDRLQQLRSRPVLAQPDGMIAVRREDLVRLQDRAFGSISTMVARHQDTLAHLLSQV 373

Query: 358 KSDFLIHNIQK 368
           +S      + +
Sbjct: 374 RSLSPQKTLDR 384



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 5/157 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQT 409
             +++       ++    + E+   + Q   Q  R + L    +   L  LR      Q 
Sbjct: 274 ADLRASTPTDAAKRIVPDLAEELGLVNQARYQLQRSLTLFLHREQDRLQQLRSRPVLAQP 333

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              I      + +L  R    +S  +     +++     ++S + + TL RGY  +Q ++
Sbjct: 334 DGMIAVRREDLVRLQDRAFGSISTMVARHQDTLAHLLSQVRSLSPQKTLDRGYAVLQLSD 393

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
              ++        T + +    G  +A+   KA P++
Sbjct: 394 GAVVSSPDQAPDGTSLRVRLARGMIDAVSQGKASPQK 430


>gi|291457374|ref|ZP_06596764.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium breve DSM
           20213]
 gi|291381209|gb|EFE88727.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium breve DSM
           20213]
          Length = 455

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE       V G+I+      + G AY +L+D+  
Sbjct: 50  PRLAAETTAQNPWPVSMLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 107

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  ++++  G+G +L 
Sbjct: 108 DI--AMEVNGF-GRFADTARQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 164

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176
             +++ +K+L  EGLF   HK P+P  PK I +I +P      D++  ++ R+P +   +
Sbjct: 165 AMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 224

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP E+A AI +L       T P  D+II+ARGGGS EDL  F+DE +VRA 
Sbjct: 225 VHVHVQGEQCPGEVAQAIARL------DTDPDVDVIIVARGGGSFEDLMGFSDERVVRAA 278

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
              + P+IS+IGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 279 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVNEQTQLITGAIDRMRLRI 338

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              +  +   +        L      L   +  +D   + L+  L  I+           
Sbjct: 339 RSRVDNEDRLIEGYANRPSLTQPLTMLEPHQRLIDDSIQRLDIGLRRIVDDAQLTVEKAH 398

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 399 ASLTALSPQSTLNR 412



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 8/176 (4%)

Query: 326 YRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
            R+ R        L   I          ++  +++       ++    + E Q  +    
Sbjct: 272 ERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVNE-QTQLITGA 330

Query: 385 KQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
              +R     + +    L           Q    +      I   I R++  L   +   
Sbjct: 331 IDRMRLRIRSRVDNEDRLIEGYANRPSLTQPLTMLEPHQRLIDDSIQRLDIGLRRIVDDA 390

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
             +V      L + + ++TL RGY  +Q  +   +           I +    G  
Sbjct: 391 QLTVEKAHASLTALSPQSTLNRGYAVVQSADGTVLDDASTAHIGDDITVTLKKGVI 446


>gi|33239563|ref|NP_874505.1| exonuclease VII, large subunit [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237088|gb|AAP99157.1| Exonuclease VII, large subunit [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 384

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 9/323 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           N    P +SV EL+  + +++         +   +S  +    +GH + +L D  + I A
Sbjct: 2   NKDTVPHFSVGELNQAIGNLLSRGFAPTFLLHATVS--KAQLKNGHLWLTLTDGKASISA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +IW  +L  I F P E     ++GK+  +   +   + +  + P+   T+L   E  +  
Sbjct: 60  VIWSSSLKNISFRPVEEDGVELLGKLNFWQNRATLVVQVIQIRPT-LSTVLRQFEVVRSL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L+ EGL +D+ + P+P  P  IA+ TS   +   D+L+    R+PL ++++  + VQG+ 
Sbjct: 119 LVNEGLIADERRRPLPRFPSAIAIFTSVPSSAYADMLRTAKERWPLTKLLVVAIPVQGEV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K        L+ L +         ++LARGGGS EDL  F++E + R +A   IP+I+
Sbjct: 179 SVKIR----EALSKLADSYLHLGVQALVLARGGGSREDLMVFDNEELCRQLAEFPIPVIT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD R+ TPT A    +P +E  +++ I L AR  + +   I+ K  
Sbjct: 235 GLGHEDDLTVADLVADHRSATPTAAIVDLLPSREMAKNNCIQLRARFKDYVTWTIQNKSR 294

Query: 306 TLNSLLKALPNSDQTLSCSRYRL 328
            +      L N    L   + + 
Sbjct: 295 EILDRKNTLVNFSPFLQLRKQKQ 317



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 44/127 (34%), Gaps = 6/127 (4%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +    +         +      +    +     I      +      +      +++   
Sbjct: 263 LLPSREMAKNNCIQLRARFKDYVTWTIQNKSREILDRKNTLVNFSPFL------QLRKQK 316

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             +S  T++L + +  + LKRG+  +++  +  +   ++L    ++ I   DG  ++ V 
Sbjct: 317 QLLSQMTKLLIALSPTSLLKRGFCIVRNNLDTAVKSVKDLKVGDQVTIELSDGYTHSKVQ 376

Query: 500 NKAPPKE 506
              P K+
Sbjct: 377 TIFPNKK 383


>gi|154489084|ref|ZP_02029933.1| hypothetical protein BIFADO_02394 [Bifidobacterium adolescentis
           L2-32]
 gi|154083221|gb|EDN82266.1| hypothetical protein BIFADO_02394 [Bifidobacterium adolescentis
           L2-32]
          Length = 426

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+        G AY +L+D+  
Sbjct: 20  PRLASETTADNPWPVSLLSEKFYTAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDQQ 77

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 78  DI--AMEVNGF-GRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLRGDAIITAGAGGSLK 134

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 135 AMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVGFKV 194

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI QL+        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 195 THVHVQGEQCPSDVVAAIRQLDA------DPDVDVIIVARGGGAFEDLIGFSDENVVRAA 248

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 249 AAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVNLDRMRMRI 308

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              +  +   +        L      L   +  LD     +   L  I+           
Sbjct: 309 DATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDASLTIEKAH 368

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 369 ASLTALSPQSTLDR 382



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 6/142 (4%)

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              +Q  + ++   +  I+  V    R I                Q    +      +  
Sbjct: 291 HEQMQLIQVNLDRMRMRIDATVSNETRLIEGYANR------PSLTQPLTMLEPHQRFLDD 344

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             TR+   L+  +     ++      L + + ++TL RGY  +Q  + + +     + T 
Sbjct: 345 ARTRMRIGLTRILDDASLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTG 404

Query: 483 TRILINFFDGQANAIVINKAPP 504
            ++ +    G   + V      
Sbjct: 405 DQLTMTLKHGIVVSEVKTVTKE 426


>gi|309802821|ref|ZP_07696923.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium dentium
           JCVIHMP022]
 gi|308220574|gb|EFO76884.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium dentium
           JCVIHMP022]
          Length = 449

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+      + G AY +L+D++ 
Sbjct: 37  PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 94

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 95  DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 151

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 152 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 211

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI  ++        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 212 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 265

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 266 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 325

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              +  ++  +        L      L   +  LD     +   L  I+           
Sbjct: 326 DATVANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 385

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 386 ASLTALSPQSTLNR 399



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 5/169 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399
                    ++  +++       +K    + E+ Q    H++++  +    +  E +   
Sbjct: 278 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATVANEMRLVE 337

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              +     Q    +      +    +R+   L+  +     ++  +   L + + ++TL
Sbjct: 338 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 397

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            RGY  IQ  + + I    N+     + +    G   + V      + Q
Sbjct: 398 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 446


>gi|148653171|ref|YP_001280264.1| exodeoxyribonuclease VII large subunit [Psychrobacter sp. PRwf-1]
 gi|148572255|gb|ABQ94314.1| Exodeoxyribonuclease VII large subunit [Psychrobacter sp. PRwf-1]
          Length = 508

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/520 (18%), Positives = 183/520 (35%), Gaps = 69/520 (13%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--K 58
           +P   +  L++    +S+    ++ +V+    H V V+ EI         GH YF L  K
Sbjct: 31  DPIDDE--LENTVLRLSDYLAAVELVVKETFRHSVWVKAEIRNLSSK--GGHYYFELAEK 86

Query: 59  DNH----SRIDAIIWKGTLNKI--EFLPEEGIE----FLVIGKIT-TFPGSSKYQIIIES 107
           D+     +     +W+    ++  +F    G++      V+  ++ TF     + + I  
Sbjct: 87  DDEGKVIASCRGNLWRFKAARVLTKFERATGMKLDRDVTVLLNVSATFHPLYGFSLAIND 146

Query: 108 LIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166
           + PS   G L        ++L  EGL +   + P PF  + + VI     A + D     
Sbjct: 147 IDPSYTLGDLARQYAAMLEQLSAEGLLNLNKQVPPPFDIEHVLVIAPEKAAGLGDFQADA 206

Query: 167 SC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223
           +                 QG+  PKEI +AI +   + + +    PD++++ RGGG++ D
Sbjct: 207 NRLEGTGACHFHYHHATFQGNHAPKEIRHAITKGMLVFKKQYERLPDVMVIIRGGGAVGD 266

Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283
           L + ND  +   +A   IP+   IGHE D  + D  A     TP+               
Sbjct: 267 LAYLNDYELAALVAEQPIPVWVGIGHERDNVILDEVAHTSFDTPSKVIAGIT-------- 318

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                                           +    +  ++   D +    +  L    
Sbjct: 319 -------------------------------NHLASLMQRTQDYADAIQHISQQQLNQAA 347

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
               R FN I N        +N+Q+ +         I+Q  K  LR   +  K  +  + 
Sbjct: 348 MATERQFNTIQN-----SSSYNLQRWQHLSDSHFNSIKQHAKFELREASMTAKTNMQRIQ 402

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
            L       +   +  +  L   ++     ++      V    +++        L +GY 
Sbjct: 403 QLSYS---HLSRANASMDSLYQALKNSSYKRLDDAERQVRYYQQVVLIQNPARLLDQGYA 459

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            +Q+ +N +++    +     + I   DG+  A+V     
Sbjct: 460 FVQNLDNKYLSSVATVEKGDFLKIAMSDGELKALVYEVTT 499


>gi|315606060|ref|ZP_07881091.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315312342|gb|EFU60428.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 432

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 14/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHSR 63
             ++     + +  L+ ++K  V+  +S + V G++  Y+    +   + +L+D    + 
Sbjct: 24  AADTTRENPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGARMHFLTLRDLQTDTS 82

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +    W G ++       EG   +   K   +  S +  +    +   G G LL  +E  
Sbjct: 83  MTVTAWAGVMD--AAPLTEGARVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIEAL 140

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           + +L  EGLF+   K P+PF+P+ I +I         D++   S R+P  R  I  V VQ
Sbjct: 141 RARLAAEGLFAQSRKKPLPFLPRTIGLICGRNAKAKDDVVVNASERWPHARFEIREVAVQ 200

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C  E+  A      L E       D+I++ARGGG++EDL  F+DE +VRA A++  P
Sbjct: 201 GERCVAEVGAA------LAELDGMNGVDVIVIARGGGAVEDLLPFSDERLVRAAASAHTP 254

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SAIGHE D  L D  AD RA TPT AA   VP +   +  +     R+  ++   +  
Sbjct: 255 IVSAIGHEGDSPLLDLVADYRASTPTDAARRVVPDEARERDGIAQAVGRMRGMLAARLAT 314

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + + L  +     L   +  L   R  L +    +   LE  +  + +    +   + + 
Sbjct: 315 ERSNLMLISSRPVLRGPEAILESHRTALSQHVVAMRSCLERRLGAERQGLTRLRATLTAL 374

Query: 361 FLIHNIQK 368
                + +
Sbjct: 375 SPRATLDR 382



 Score = 93.7 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 43/141 (30%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R+     Q           R         +     +    +  +    T + + +  
Sbjct: 289 DEARERDGIAQAVGRMRGMLAARLATERSNLMLISSRPVLRGPEAILESHRTALSQHVVA 348

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   L  ++ +    ++     L + + + TL RGY  ++  +   IT  + +     I 
Sbjct: 349 MRSCLERRLGAERQGLTRLRATLTALSPRATLDRGYALLKTPSGALITSSQQVKKGDLIE 408

Query: 487 INFFDGQANAIVINKAPPKEQ 507
                G+  A V+    P   
Sbjct: 409 GILASGRMVAQVVGATAPTPP 429


>gi|306822272|ref|ZP_07455653.1| exodeoxyribonuclease VII large subunit [Bifidobacterium dentium
           ATCC 27679]
 gi|304554434|gb|EFM42340.1| exodeoxyribonuclease VII large subunit [Bifidobacterium dentium
           ATCC 27679]
          Length = 430

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+      + G AY +L+D++ 
Sbjct: 18  PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 75

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 76  DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 132

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 133 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 192

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI  ++        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 193 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 246

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 247 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 306

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              +  ++  +        L      L   +  LD     +   L  I+           
Sbjct: 307 DATVANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 366

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 367 ASLTALSPQSTLNR 380



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 5/169 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399
                    ++  +++       +K    + E+ Q    H++++  +    +  E +   
Sbjct: 259 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATVANEMRLVE 318

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              +     Q    +      +    +R+   L+  +     ++  +   L + + ++TL
Sbjct: 319 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 378

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            RGY  IQ  + + I    N+     + +    G   + V      + Q
Sbjct: 379 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 427


>gi|171742359|ref|ZP_02918166.1| hypothetical protein BIFDEN_01470 [Bifidobacterium dentium ATCC
           27678]
 gi|171277973|gb|EDT45634.1| hypothetical protein BIFDEN_01470 [Bifidobacterium dentium ATCC
           27678]
          Length = 430

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + VS LS      VE     V V G+I+      + G AY +L+D++ 
Sbjct: 18  PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 75

Query: 63  RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117
            I   +    + G          +G   ++ GK   +   +   +  +++I +G+G +L 
Sbjct: 76  DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 132

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176
             +++ +KKL  EGLF    K P+P  P  I +I +P      D++  +  R+P+    +
Sbjct: 133 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 192

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
             V VQG++CP ++  AI  ++        P  D+II+ARGGG+ EDL  F+DE +VRA 
Sbjct: 193 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 246

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A +  P+ISAIGHE DWTL D  ADLRA TPT AA+  VP        +     R+   I
Sbjct: 247 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 306

Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
              I  ++  +        L      L   +  LD     +   L  I+           
Sbjct: 307 DATIANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 366

Query: 355 NRIKSDFLIHNIQK 368
             + +      + +
Sbjct: 367 ASLTALSPQSTLNR 380



 Score = 93.7 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 57/169 (33%), Gaps = 5/169 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399
                    ++  +++       +K    + E+ Q    H++++  +    I  E +   
Sbjct: 259 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATIANEMRLVE 318

Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              +     Q    +      +    +R+   L+  +     ++  +   L + + ++TL
Sbjct: 319 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 378

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            RGY  IQ  + + I    N+     + +    G   + V      + Q
Sbjct: 379 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 427


>gi|148240529|ref|YP_001225916.1| exonuclease VII large subunit [Synechococcus sp. WH 7803]
 gi|147849068|emb|CAK24619.1| Exonuclease VII large subunit [Synechococcus sp. WH 7803]
          Length = 383

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 150/314 (47%), Gaps = 9/314 (2%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           N+   P YSV EL+  +  ++E        V G  S  R     GH + +L D  + I  
Sbjct: 2   NADSIPSYSVQELNASVGALLERGFAPRFLVHG--SALRPQIKKGHLWLTLSDGDASITV 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L ++ F+P EG    V+GK+  +   +   +    L PS   T+    E  K+ 
Sbjct: 60  VCWASRLKQLNFVPTEGEGVTVVGKLNFWSARASLAVQAIDLRPS-RSTIERRYEAVKEL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L +EGL     K  +P +PK IA++TS   + + D+L+    R+PL  +++ P+ VQGD 
Sbjct: 119 LSQEGLIDPSRKRFLPPVPKRIALLTSVPSSALADMLRTAQERWPLTELLVIPIPVQGDV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
            PK  +        L E     + + ++LARGGGS EDL  F+DE + R +A+  +P+++
Sbjct: 179 APKICSVLE----RLAERVESLQVNAVVLARGGGSREDLMVFDDESLCRRLAHFPVPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+AD  AD RA TPT A    +P +      L     +L       ++ +  
Sbjct: 235 GLGHEDDRTVADLVADFRAATPTAAIVSLLPTRTSALQFLSQCRQQLQQSQRWRLRREKE 294

Query: 306 TLNSLLKALPNSDQ 319
            L      L  S+ 
Sbjct: 295 RLLQRRDTLRRSNP 308



 Score = 69.0 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/117 (9%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +       L+++   +++          + K R+      ++          +  +    
Sbjct: 263 LLPTRTSALQFLSQCRQQLQQSQRWRLRREKERLLQRRDTLR------RSNPAAGVARRR 316

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
             +    ++LQ+ + +  L RG+ ++ +++   +    +      ++I+  DG+ + 
Sbjct: 317 DRLEQRRQLLQALSPQRWLARGFATVSNSDGRLLQSVADARPSQPLIIHLSDGEIDV 373


>gi|227497816|ref|ZP_03928001.1| exodeoxyribonuclease VII [Actinomyces urogenitalis DSM 15434]
 gi|226832776|gb|EEH65159.1| exodeoxyribonuclease VII [Actinomyces urogenitalis DSM 15434]
          Length = 447

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 169/372 (45%), Gaps = 18/372 (4%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI- 64
            + +     + ++ LS  +   V + ++ V V  ++         G ++ +L+D  + I 
Sbjct: 30  ARETTADNPWPLALLSTKIDQYV-AKMTPVWVEAQVVQLNRRA--GMSFLTLRDLSAEIS 86

Query: 65  -DAIIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             A +++  L      +     +G+  +V G+ T +  S  +Q+ ++ +   G+G LL  
Sbjct: 87  LRASMYRRDLVASEQAMGTELSDGMRVVVHGRPTFWTRSGSFQLQVDQIRLVGTGDLLAR 146

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E+ ++ L  EGLF+ + K P+PF+P+++ ++         D++     R+P L   +  
Sbjct: 147 IEQLRRVLAAEGLFAPERKRPLPFLPRVVGLVCGRDAKARDDVITNARLRWPGLPFEVRE 206

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     ++  AI +L+        P  D+I++ARGGGS+EDL  F+DE +VRA A 
Sbjct: 207 VAVQGVHAVSQVGAAIAELDAR------PEVDVIVVARGGGSVEDLLSFSDEGLVRAAAM 260

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              P++SAIGHETD  L D  AD RA TPT AA   VP        L    +R+   + R
Sbjct: 261 CRTPLVSAIGHETDRPLLDDVADYRASTPTDAARRIVPDLAEETVGLDQARSRIRTALAR 320

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   L+ + +   + +    +      L +    L   L   +            R
Sbjct: 321 RVTEEQTRLDRVRERPVMTDPTVIVRDKEADLSQGRERLRRALLTTLDLAGADLRAETAR 380

Query: 357 IKSDFLIHNIQK 368
           + +      + +
Sbjct: 381 LTALSPQGVLDR 392



 Score = 91.0 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 2/143 (1%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + + +  I   +    R    + +        +       +      + +   R+   L 
Sbjct: 307 LDQARSRIRTAL--ARRVTEEQTRLDRVRERPVMTDPTVIVRDKEADLSQGRERLRRALL 364

Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             +      +   T  L + + +  L RGY  ++      +T    L     I      G
Sbjct: 365 TTLDLAGADLRAETARLTALSPQGVLDRGYAILRKPGVGVVTSSEELKKGDLIEGVLAHG 424

Query: 493 QANAIVINKAPPKEQPTKKCQLH 515
           +  A V+    P   P+      
Sbjct: 425 RMVAQVVGATKPSPTPSTAPAER 447


>gi|148270189|ref|YP_001244649.1| exodeoxyribonuclease VII, large subunit [Thermotoga petrophila
           RKU-1]
 gi|166232369|sp|A5ILK0|EX7L_THEP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|147735733|gb|ABQ47073.1| Exodeoxyribonuclease VII large subunit [Thermotoga petrophila
           RKU-1]
          Length = 394

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
           YSV+E++ ++K ++E +  L++V V GEISG       GH +FSL + ++R++ +I+ G 
Sbjct: 6   YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +    +EG   LV G ++ +     Y+ I  ++       +     +   K L E  
Sbjct: 64  N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDRVGMYQIKFETTLKKLLEEG 121

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
              + K  +P  P+ I +ITS   A ++D+++    R  P+ + +F   VQGD   +E+ 
Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            A+ + N           D++++ RGGGS EDLW FN+E ++R I     P+++ IGHE 
Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILKLRHPVVTGIGHEI 234

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D  +AD+ AD+   TPTGAAE  +P    +   L +   +L   +      +   L +L 
Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294

Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             L        +       R+  L  +L   L     +       +   ++S   +  ++
Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354

Query: 368 K 368
           +
Sbjct: 355 R 355



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + +    + +   +           +     L M+  +      +    +K+L  ++   
Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           L    +     +    R+L+S      L+RG+  ++      + +  +L     + + F 
Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384

Query: 491 DGQANAIVIN 500
           DG   A VI 
Sbjct: 385 DGTKKAQVIG 394


>gi|332671419|ref|YP_004454427.1| exodeoxyribonuclease VII, large subunit [Cellulomonas fimi ATCC
           484]
 gi|332340457|gb|AEE47040.1| exodeoxyribonuclease VII, large subunit [Cellulomonas fimi ATCC
           484]
          Length = 415

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 155/372 (41%), Gaps = 16/372 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF-SLKDNH 61
           P     +     + V  L+  +   V + +  V V G++   +  ++    YF +L+D+ 
Sbjct: 13  PLRAAETTPERPWPVRHLAPKIADYV-ARMPPVWVEGQVLNLKRWNT---MYFLTLRDSD 68

Query: 62  --SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
               +        + ++     +G   +V                 + +   G G LL  
Sbjct: 69  LDMSLSVTAPASAIRRLGDAAADGAHVVVHASPRFHAKKGDLTFQADDVRLVGLGELLAR 128

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178
           +E  K  L  EGLF    K P+PF+P ++ ++ +  G    D++     R+P +R  I  
Sbjct: 129 IEHLKGVLAAEGLFDQGRKRPLPFLPAVVGLVCAQQGDAEHDVVSNARARWPGVRFEIRR 188

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           V VQG     E++ AI  L+        PR +++++ARGGGS EDL  F++E +VRA A 
Sbjct: 189 VTVQGPRAVPEVSAAIADLDA------DPRVEVVVVARGGGSFEDLLPFSNETLVRAAAA 242

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
              P++SAIGH  D  L D  AD RA TPT AA+  VP     ++ ++ L  R    ++ 
Sbjct: 243 CRTPLVSAIGHHMDTPLLDLVADFRASTPTDAAKRVVPDVTEERARVLQLRQRSRGALVH 302

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +  +   L+       L N    +     R+  L       L   +         +  +
Sbjct: 303 RLTREQAGLDHWRSRPALANPTTLVDTHEARVQVLRDAARRALHTELVHGRAEVAGLAAQ 362

Query: 357 IKSDFLIHNIQK 368
           +++      + +
Sbjct: 363 VRALSPAATLDR 374



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 53/160 (33%), Gaps = 5/160 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++   ++       ++    + E++  + Q+ ++    +      + A L 
Sbjct: 253 HHMDTPLLDLVADFRASTPTDAAKRVVPDVTEERARVLQLRQRSRGALVHRLTREQAGLD 312

Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
             R +         +      ++ L       L  ++      V+     +++ +   TL
Sbjct: 313 HWRSRPALANPTTLVDTHEARVQVLRDAARRALHTELVHGRAEVAGLAAQVRALSPAATL 372

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
            RGY  +Q  + + +    ++A    + +    G+  A V
Sbjct: 373 DRGYAVVQRDDGHVVRDPADVAPGDALRVRVARGELAAQV 412


>gi|293189380|ref|ZP_06608103.1| exodeoxyribonuclease VII, large subunit [Actinomyces odontolyticus
           F0309]
 gi|292821843|gb|EFF80779.1| exodeoxyribonuclease VII, large subunit [Actinomyces odontolyticus
           F0309]
          Length = 442

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 14/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
              ++     + +  L+ ++K  V+  +S + V G++  Y+    +   + +L+D    +
Sbjct: 28  KAADTTRDNPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGAKMHFLTLRDLETDT 86

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +    W G ++       EG   +   K   +  S +  +    +   G G LL  +E 
Sbjct: 87  SMTVTAWAGVMDS--TPLTEGARVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIEA 144

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            + +L  EGLFSD HK P+PF+P+ I +I         D++   S R+P  R  I  V V
Sbjct: 145 LRARLAAEGLFSDAHKKPLPFLPRTIGLICGRNAKAKDDVVVNASDRWPSARFEIREVAV 204

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QGD C  E+  A      L E       D+I++ARGGG++EDL  F+DE +VRA+A++  
Sbjct: 205 QGDHCVPEVGRA------LLELDAMDDVDVIVIARGGGAVEDLLPFSDERLVRAVADART 258

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           PI+SAIGHE D  L D  AD RA TPT AA   VP +      +     R+   +   + 
Sbjct: 259 PIVSAIGHEGDSPLLDLVADYRASTPTDAARRIVPDRAREHDGISQALTRMRGALGARLA 318

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            + + L  +     L   +  +   R  L +    +   +E  +  + +        + +
Sbjct: 319 TERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTAMRSAIERRLASERQQLTRSRATLTA 378

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 379 LSPQATLDR 387



 Score = 96.4 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 45/145 (31%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R+H    Q           R         +     + +  +  +      + + +T 
Sbjct: 294 DRAREHDGISQALTRMRGALGARLATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTA 353

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  ++ S    ++ +   L + + + TL RGY  ++  +   IT    +     I 
Sbjct: 354 MRSAIERRLASERQQLTRSRATLTALSPQATLDRGYVLLKTPSGALITSSAQIKKGDLIE 413

Query: 487 INFFDGQANAIVINKAPPKEQPTKK 511
                G+  A V+    P       
Sbjct: 414 GILASGRMVAQVVGATNPTPPADAP 438


>gi|154507707|ref|ZP_02043349.1| hypothetical protein ACTODO_00188 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797341|gb|EDN79761.1| hypothetical protein ACTODO_00188 [Actinomyces odontolyticus ATCC
           17982]
          Length = 442

 Score =  203 bits (516), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 14/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
               ++     + +  L+ ++K  V+  +S + V G++  Y+    +   + +L+D    
Sbjct: 27  AKAADTTRDNPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGAKMHFLTLRDLETD 85

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           + +    W G ++       EG   +   K   +  S +  +    +   G G LL  +E
Sbjct: 86  TSMTVTAWAGVMDS--TPLTEGAHVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIE 143

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
             + +L  EGLF+D  K P+PF+P+ I +I         D++   S R+P  R  I  V 
Sbjct: 144 ALRARLAAEGLFADARKKPLPFLPRTIGLICGRNAKAKDDVVVNASDRWPSARFEIREVA 203

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQGD C  E+  A+L      E       D+I++ARGGG++EDL  F+DE +VRA+A++ 
Sbjct: 204 VQGDHCVPEVGRALL------ELDAMDDVDVIVIARGGGAVEDLLPFSDERLVRAVADAR 257

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
             I+SAIGHE D  L D  AD RA TPT AA   VP +   +  +     R+   +   +
Sbjct: 258 TSIVSAIGHEGDSPLLDLVADYRASTPTDAARRIVPDRARERDGISQALTRMRGALGARL 317

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + + L  +     L   +  +   R  L +    +   +E  +  + +        + 
Sbjct: 318 ATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTAMRSAIERRLASERQQLTRSRATLT 377

Query: 359 SDFLIHNIQK 368
           +      + +
Sbjct: 378 ALSPQATLDR 387



 Score = 97.5 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 44/145 (30%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R+     Q           R         +     + +  +  +      + + +T 
Sbjct: 294 DRARERDGISQALTRMRGALGARLATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTA 353

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +   +  ++ S    ++ +   L + + + TL RGY  ++  +   IT    +     I 
Sbjct: 354 MRSAIERRLASERQQLTRSRATLTALSPQATLDRGYALLKTPSGALITSSAQIKKGDLIE 413

Query: 487 INFFDGQANAIVINKAPPKEQPTKK 511
                G+  A V+    P       
Sbjct: 414 GILASGRMVAQVVGATNPTPPVDAP 438


>gi|213622891|ref|ZP_03375674.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 158

 Score =  203 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 1/157 (0%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K KL
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164
             EGLF  QHK P+P     + VITS TGA + DIL 
Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILH 158


>gi|255994611|ref|ZP_05427746.1| exodeoxyribonuclease VII, large subunit [Eubacterium saphenum ATCC
           49989]
 gi|255993324|gb|EEU03413.1| exodeoxyribonuclease VII, large subunit [Eubacterium saphenum ATCC
           49989]
          Length = 398

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 15/363 (4%)

Query: 14  EYSVSELSYHLKHIVESNLSHVC---VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             +V+ L  ++K   + +L  +    V+G+IS ++      +A+FSLKD  + ID + + 
Sbjct: 3   PLTVTHLVEYIKDKFKKDL-FLWEISVKGQISNFKYDPRKNYAFFSLKDIGASIDCVYFD 61

Query: 71  -GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
              ++      E+  E  + G++  +  + + Q+ +E L   G       LE  ++KL  
Sbjct: 62  VHDIDSNALDVED-EEVEITGRLDVYQKTGRMQLYVERLKRCGESEKAKQLEMLRQKLEG 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           EGLF  + K  IP     I +IT    A   DI + I  + P +  +I    VQGDE   
Sbjct: 121 EGLFDKEKKRHIPLYATKIGIITGKDSAAQADIKKVIEKKNPYINTVIEEAYVQGDEAIT 180

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            I  A      + E      P+II+LARGGG+  DL  FN E + R +  S+IP+++ +G
Sbjct: 181 SICRAFDVFEGMDE-----PPEIIVLARGGGAKTDLDAFNTEEVARRVFASNIPVVTGVG 235

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D TLAD AAD R  TPT AA+ A    + L + L+ +  RL +++ R  +   N L 
Sbjct: 236 HEIDVTLADMAADQRESTPTAAADRAAFDWDQLSAELLGIHLRLKSVLERKTETCGNRLL 295

Query: 309 SLLKALP---NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                +    N    +S     ++ L      ++++ +         +   ++++ +  N
Sbjct: 296 QKFLNIEKKANIGMRISKMENTVEALWGVANASMQMKLTNLKNEIAKMNQSLENNDISKN 355

Query: 366 IQK 368
           + K
Sbjct: 356 LAK 358



 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 42/162 (25%), Gaps = 7/162 (4%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----QIVKQHLRYIFLEKKEKI 399
                    +    +         +      +    +     ++     R         +
Sbjct: 236 HEIDVTLADMAADQRESTPTAAADRAAFDWDQLSAELLGIHLRLKSVLERKTETCGNRLL 295

Query: 400 AILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                +  +     RI  +   ++ L       +  K+ +    ++   + L++      
Sbjct: 296 QKFLNIEKKANIGMRISKMENTVEALWGVANASMQMKLTNLKNEIAKMNQSLENNDISKN 355

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           L +GY      N   IT    L  +    +   DG+ +  + 
Sbjct: 356 LAKGYALPL-VNGKVITTAAELRRQESFELLMKDGKVDCEIT 396


>gi|260910064|ref|ZP_05916746.1| exodeoxyribonuclease VII [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635832|gb|EEX53840.1| exodeoxyribonuclease VII [Prevotella sp. oral taxon 472 str. F0295]
          Length = 450

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/504 (15%), Positives = 167/504 (33%), Gaps = 98/504 (19%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            ++ EL+  ++  +   +     V  EIS  R +   GH Y  L  KD       ++  A
Sbjct: 24  LTLYELNQMVRESLAITMPDEYWVEAEISEMREVR--GHCYMELVQKDVTGNTPVAKASA 81

Query: 67  IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
             WK     +              G++  ++           +  I+  + P+   G + 
Sbjct: 82  KCWKNKWGLLRPHFERNAGQTLRAGLKVRLLVYADFHEAYG-FSWIVADIDPTYTLGDMA 140

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  + L ++G+F  Q +  +P   + +AVI+S   A   D  + +          V
Sbjct: 141 RKRLEIVRMLKQQGVFDLQKELRLPLFTQRVAVISSEQAAGYGDFYRHLHENDWHLHFSV 200

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +F   +QG+   + +  A+  +N           D++++ RGGG+  DL  F+   +  
Sbjct: 201 QLFTATMQGEGVERSVIAALDAINERLTD-----FDVVVIIRGGGATSDLSGFDSLPLAE 255

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGH+ D ++ D  +  R  TPT AA + V                   
Sbjct: 256 NVANFPLPIITGIGHDRDESVLDMVSFRRVKTPTAAAALLVEH----------------- 298

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
                                     L+ +  R+     E+ H L+  +  +      + 
Sbjct: 299 --------------------------LAETYQRVTDAQEEMVHLLQRRMELERIRLARLA 332

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
            ++   F +   ++                           K    +   +R      + 
Sbjct: 333 EKVPMLFSLVRTRQE--------------------------KRFENMALRMRNAMATTLQ 366

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                +++L   +       +      + +  + ++S      L +GY+         + 
Sbjct: 367 RQDLRLQRLTLALPTQAERLLTKASHRLELLEQTIKSHDPALLLSKGYSITTL-GGKVVR 425

Query: 475 QKRNLATKTRILINFFDGQANAIV 498
              +L     I+     G+  ++V
Sbjct: 426 NANDLQKGDVIVTQLQKGKVKSVV 449


>gi|184200356|ref|YP_001854563.1| exodeoxyribonuclease VII large subunit [Kocuria rhizophila DC2201]
 gi|183580586|dbj|BAG29057.1| exodeoxyribonuclease VII large subunit [Kocuria rhizophila DC2201]
          Length = 437

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 14/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   +++     + +S+LS+ L   V+       V G++            Y +L+D   
Sbjct: 27  PRLARDTSPENPWPLSKLSHALHGWVQKA-PDAWVEGQVIEVNERARV--CYVTLRDLQE 83

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            + +   ++K  + ++E   E G   +V  +   +  + +  ++   + P G G LL  L
Sbjct: 84  EASVSVTLFKKEMARLERPLERGSRVVVNLQADFYVKTGRLSMLGRDIRPVGLGDLLERL 143

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L +EGLF    K P+P +P  + +IT       +D+++  + R+P ++  I  V
Sbjct: 144 ERLRRALADEGLFDPARKKPLPVLPHRVGLITGRNSDAEKDVVRNATNRWPGVQFEIREV 203

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    + +  A+ +L+ + E       D+I++ARGGG+ EDL  F++E ++RA+  +
Sbjct: 204 PVQGSGSARAVIGALEELDAMAE------VDVIVIARGGGAFEDLLSFSEESLLRAVFAA 257

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D+ AD+RA TPT A +  VP     +  L    A L+  +  L
Sbjct: 258 RTPVVSAIGHENDQPLLDHVADVRASTPTDAGKRVVPDVHEERLRLGQARAALDRAVGSL 317

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           I+ +   L ++     L   D  +      LDR           +  R       +  R+
Sbjct: 318 IEREQQGLATVRSRPVLSQPDGMILVREEDLDRWRTRAWTATNSLTLRAQDSVAQMRARV 377

Query: 358 KSDFLIHNIQK 368
           ++      + +
Sbjct: 378 RALSPQQTLDR 388



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 47/141 (33%), Gaps = 2/141 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + R  + + +  +++ V   +                +  Q    I      + +  T
Sbjct: 296 VHEERLRLGQARAALDRAVGSLIEREQQGLA--TVRSRPVLSQPDGMILVREEDLDRWRT 353

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R     +        SV+     +++ + + TL RGY  +Q T+ + +T         ++
Sbjct: 354 RAWTATNSLTLRAQDSVAQMRARVRALSPQQTLDRGYAVVQTTDGSVLTDASRAQVGQQL 413

Query: 486 LINFFDGQANAIVINKAPPKE 506
            +    G+    V   +  + 
Sbjct: 414 TVRLAAGELGVDVTGTSTRQP 434


>gi|33866713|ref|NP_898272.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. WH 8102]
 gi|81835051|sp|Q7U490|EX7L_SYNPX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|33633491|emb|CAE08696.1| possible exodeoxyribonuclease VII large subunit [Synechococcus sp.
           WH 8102]
          Length = 387

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/306 (30%), Positives = 154/306 (50%), Gaps = 9/306 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
            P +SV+EL+  + +++E        V   +S  R     GH + +L D  + I A+ W 
Sbjct: 6   IPSFSVAELNTAIGNLLERGFAPRFLVEATVS--RPQLKKGHLWLTLTDGEASISAVAWA 63

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
             L ++ + PE+G    V+GK+  +   +   + +  + PS   T+L   E  +++L E 
Sbjct: 64  SQLRQLRYRPEDGDGVTVVGKLNFWAARASLNVQVLDIRPS-LSTVLRQFELVRRRLEEA 122

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           GL     + P+P  P+ +AV+TS   + + D+L+  S R+P+ R+++ P+ VQG    + 
Sbjct: 123 GLLDITRRRPLPRQPRTLAVLTSVPSSALADMLRTASERWPMTRLLVVPIPVQGSVAARI 182

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
                  L  L E  +    D ++LARGGGS EDL  F+DE + R +A   +P+++ +GH
Sbjct: 183 R----EVLGRLAEEASALGLDALVLARGGGSREDLAVFDDEDLCRDLAAFPVPVVTGLGH 238

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD  AD RA TPT A    +P +      L     RL  +  R ++ +   L  
Sbjct: 239 EDDLTVADLVADHRAATPTAAIVALLPDRHVALRELQQQRQRLRELRSRWLERQHQRLLD 298

Query: 310 LLKALP 315
             +AL 
Sbjct: 299 RRQALA 304



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 16/125 (12%)

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--------------- 446
           L   R      +      +++L +R       ++     ++++ T               
Sbjct: 263 LLPDRHVALRELQQQRQRLRELRSRWLERQHQRLLDRRQALALLTPQRRLQQLRQQLEQR 322

Query: 447 -RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
             +L++ + +  LK+G   + +     I   + +  K  + ++F DG    +V    P  
Sbjct: 323 RALLRALSPQRWLKQGLALVSNGQGMTIDGVKGVRKKDTLTLSFHDGSIETVVTQVRPQN 382

Query: 506 EQPTK 510
              T 
Sbjct: 383 SSSTP 387


>gi|296393508|ref|YP_003658392.1| exodeoxyribonuclease VII large subunit [Segniliparus rotundus DSM
           44985]
 gi|296180655|gb|ADG97561.1| exodeoxyribonuclease VII, large subunit [Segniliparus rotundus DSM
           44985]
          Length = 416

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 13/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
               + +   + V  ++  +   ++  L  V + G+I+     H +  A+ +L+D   ++
Sbjct: 13  EAAANGEDNPWPVKTVAMKIAGWIDR-LGAVWITGQIAELSARHGARAAFVTLRDTAENA 71

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +  +   G L       +EG E +V GK++ +       I  +++   G G LL  +E+
Sbjct: 72  SLQIMCPMGLLKG-NPEIKEGAEVVVHGKLSFYTARGTLAIWADTIRAVGVGELLARIER 130

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            +K+   EGL   + K P+PF+P  + +IT    A  +D+L     R+P +R  +  V V
Sbjct: 131 LRKQFAAEGLSDPRRKRPLPFLPGGVGLITGRASAAQQDVLSIAKARWPQVRFHLREVAV 190

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG    + +  A      LKE +     ++I+LARGGGS+EDL  F++E + RA+A   +
Sbjct: 191 QGPGSAQAVIAA------LKELQASSEVEVIVLARGGGSVEDLLTFSEESLCRAVAACPV 244

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHETD  L+D  AD+RA TPT AA+  VP     +S L  +  R    +   ++
Sbjct: 245 PVVSAIGHETDRPLSDDVADVRAATPTDAAKRVVPDVAVERSRLHEMRGRSAAALRGWVE 304

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   + SL     L +    L      L      L  +++  I  +         R+ +
Sbjct: 305 REQARIASLAARPALSDPHAMLRARAEGLRGARDTLRRSVQRQIEHERHAVAASAARLAA 364

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 365 LGPAATLAR 373



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 2/135 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R  + E +      ++  +           A            +      ++     + 
Sbjct: 284 ERSRLHEMRGRSAAALRGWVEREQARIASLAAR--PALSDPHAMLRARAEGLRGARDTLR 341

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             +  +I+    +V+ +   L +     TL RGY  +Q  +   +          R+ I 
Sbjct: 342 RSVQRQIEHERHAVAASAARLAALGPAATLARGYALVQGADGELVRDPAQTKPGDRLRIR 401

Query: 489 FFDGQANAIVINKAP 503
             DG   A+   + P
Sbjct: 402 LADGLLGAMTTKEIP 416


>gi|258654509|ref|YP_003203665.1| exodeoxyribonuclease VII large subunit [Nakamurella multipartita
           DSM 44233]
 gi|258557734|gb|ACV80676.1| exodeoxyribonuclease VII, large subunit [Nakamurella multipartita
           DSM 44233]
          Length = 432

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 12/371 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P     +     + V  L+  +   V        V G+++       S  ++ +L+D   
Sbjct: 24  PTKAAETSRENPWPVRALAQRMTEYVARA-PAAWVEGQLAQVTMRGGSQASFLTLRDPSV 82

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +  +  +  L  +   P EG   +V G+   +P        ++ + P G G LL  L
Sbjct: 83  PMSLQVVCSRALLMSMNPPPSEGSRVVVHGRFEFYPARGTLSFKVDQMHPVGIGELLARL 142

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGL   + K P+PF+P ++ +IT    A   D+L     R+P +R  +   
Sbjct: 143 ERLRRLLAAEGLTDPRRKRPLPFLPTVVGLITGRASAAESDVLANARARWPAVRFRVENP 202

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG     +I  ++ +L+        P  D+I+LARGGGS+EDL  F+DE + RA++  
Sbjct: 203 AVQGVSAVTQIIESLARLDA------DPEVDVIVLARGGGSMEDLLPFSDEALCRAVSGC 256

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P+I+AIGHE D  + D  AD+R  TPT A +  VP     +  +   +AR    +   
Sbjct: 257 RTPVIAAIGHEPDHPIVDDVADVRCSTPTDAGKRVVPDALAERRQVEQWQARARRALTGW 316

Query: 300 IKYKINTLNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  +   L+       L +    L   +  ++R       +L+  + R  R   H   ++
Sbjct: 317 VSTEQARLHRLTSASVLADPFSPLDRRQREVERDRDRGRASLDRTLERMERDIAHRRAQL 376

Query: 358 KSDFLIHNIQK 368
                   + +
Sbjct: 377 AVLGPAATLAR 387



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 3/138 (2%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ + + Q    + +   +           +    +     + +      +++   R  
Sbjct: 298 ERRQVEQWQARARRALTGWVSTEQARLHRLTSAS--VLADPFSPLDRRQREVERDRDRGR 355

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             L   ++     ++     L       TL RGY  +Q      +    +      + I 
Sbjct: 356 ASLDRTLERMERDIAHRRAQLAVLGPAATLARGYAVVQSA-GAVLRSVADAPAGADLRIR 414

Query: 489 FFDGQANAIVINKAPPKE 506
             DG   A+     P  E
Sbjct: 415 VVDGAVLAVSTGPEPASE 432


>gi|118586759|ref|ZP_01544196.1| exodeoxyribonuclease VII, large subunit [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432847|gb|EAV39576.1| exodeoxyribonuclease VII, large subunit [Oenococcus oeni ATCC
           BAA-1163]
          Length = 406

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 16/404 (3%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71
            +V  L+ +L      +  L  V + GEI GY+   SSG AYF L+D   S I A +   
Sbjct: 11  LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFDLRDEDESSIRAYVSPT 68

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L    F  + G +  ++  +  +   +   + I S+ P+G G L   L + K KL +EG
Sbjct: 69  ILRSFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 128

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+      + + PK IAVITS TGAVI DI   I  R P L++ +F   VQGD   KE+
Sbjct: 129 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 187

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +A+ + +           D II+ARGGGS+ DLW FNDE +VR +++ S P+IS+IGHE
Sbjct: 188 VSAVKKADQS-------DADAIIIARGGGSMLDLWPFNDEQLVRLLSSLSKPVISSIGHE 240

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D AAD R  TPT AA    P     +++L  L A ++  I +L++  +N    L
Sbjct: 241 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 300

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             +  L + DQ       +L  L   L ++      +  + F ++  ++ +   +  + +
Sbjct: 301 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 360

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
                 ++ + I+   +   +        K + L  ++E + +R
Sbjct: 361 GFSLTFKEDRLIKNAQQLKEKDRIKILFAKGSALAEIKEISDDR 404



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 6/187 (3%)

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
              +  L    +  +  I          +    + +       K    IL+ + +++Q+ 
Sbjct: 220 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 279

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439
                 I    ++ +     L             F     ++ L  R+    + + +   
Sbjct: 280 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 339

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
              +  T  L + +    L RG++     +   I   + L  K RI I F  G A A + 
Sbjct: 340 QQFANLTAKLDALSPLKVLDRGFSLTFKED-RLIKNAQQLKEKDRIKILFAKGSALAEIK 398

Query: 500 NKAPPKE 506
             +  + 
Sbjct: 399 EISDDRR 405


>gi|159036479|ref|YP_001535732.1| exodeoxyribonuclease VII, large subunit [Salinispora arenicola
           CNS-205]
 gi|157915314|gb|ABV96741.1| exodeoxyribonuclease VII, large subunit [Salinispora arenicola
           CNS-205]
          Length = 400

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 100/418 (23%), Positives = 171/418 (40%), Gaps = 22/418 (5%)

Query: 20  LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIE 77
           +S  +   + + L  V V G+++       +   + +L+D  + +       +  L+   
Sbjct: 2   VSQKISAWI-ARLGWVWVDGQVAQVSRRPGASTVFLTLRDPSADLSLTVTTNRDVLDSGA 60

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137
               EG   ++  K   +       +  + +   G G LL  LEK KK L  EGLF  + 
Sbjct: 61  PQLREGARVVLHAKPDFYAARGTLSLRADEIRQVGLGELLARLEKLKKLLGAEGLFDPRR 120

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196
           K  +PF+P  I +IT    A  RD+      R+P +      V VQG     +I +A+  
Sbjct: 121 KQRLPFLPHQIGLITGRASAAERDVRTNARRRWPAVTFRTVNVAVQGPSAVPQIVDALRV 180

Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256
           L+        P  ++I++ARGGG IEDL  F+DE + RA+     P++SAIGHETD  L 
Sbjct: 181 LDA------DPTTEVIVIARGGGGIEDLLPFSDEALCRAVFACRTPVVSAIGHETDAPLL 234

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           DY AD+RA TPT AA+  VP        +    +RL+  +  L+  + + L      L  
Sbjct: 235 DYVADVRASTPTDAAKRIVPDLAEEVRVIGQARSRLDRAVRNLVDREAHRLE-----LLR 289

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
           S   L+  +  ++RL  ++   L   + R       + + + +        ++R   L  
Sbjct: 290 SRPVLARPQLMVERLATDVS-ALRHRVDRC------LAHTLTAAADDLRHTRDRLRALSP 342

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              +++      R      +    +      + +     L   I     R       +
Sbjct: 343 AATLDRGYAIVQRTDGHVVRAASEVAEGDPVRVRLADGELAATIDAGDRRQASPARRR 400



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 61/147 (41%), Gaps = 2/147 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + +  + I + +  +++ V+  +       + ++     +  + +  +  L T +  L  
Sbjct: 256 LAEEVRVIGQARSRLDRAVRNLVDREAH--RLELLRSRPVLARPQLMVERLATDVSALRH 313

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R++  L+H + +    +  T   L++ +   TL RGY  +Q T+ + +     +A    +
Sbjct: 314 RVDRCLAHTLTAAADDLRHTRDRLRALSPAATLDRGYAIVQRTDGHVVRAASEVAEGDPV 373

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKC 512
            +   DG+  A +      +  P ++ 
Sbjct: 374 RVRLADGELAATIDAGDRRQASPARRR 400


>gi|145640355|ref|ZP_01795939.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           R3021]
 gi|145274941|gb|EDK14803.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           22.4-21]
          Length = 162

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           N++    YSVS+L+   + ++E + S + + GEIS +     SGH Y +LKD ++++   
Sbjct: 2   NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDKNAQVRCA 60

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           +++    ++ F P+ G++ LV   ++ +     YQ+II+S+ P+G G L    E  K KL
Sbjct: 61  MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166
             EGLF+   K  +P   K + +ITS TGA ++DIL   
Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHIF 159


>gi|255524172|ref|ZP_05391132.1| Exodeoxyribonuclease VII [Clostridium carboxidivorans P7]
 gi|255512157|gb|EET88437.1| Exodeoxyribonuclease VII [Clostridium carboxidivorans P7]
          Length = 179

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 3/163 (1%)

Query: 15  YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            +VSEL+ ++K +V+++    +  V+GEIS ++ +HSSGH YFS+KD +S+I+ ++++ +
Sbjct: 6   LTVSELNGYIKKLVDNDFILGNSNVKGEISNFK-LHSSGHIYFSIKDEYSKINCVMFRSS 64

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              ++F+PE G++ +V G+++ +     YQI    +   G G L  A EK K KL  +GL
Sbjct: 65  ARNLKFMPENGMKVVVKGRVSVYEKDGAYQIYCNDIELDGVGELYMAFEKLKSKLQSQGL 124

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI 175
           F   HK  IP   + I V+TSPTGA +RDI+     R    V 
Sbjct: 125 FEVTHKKEIPPYARKIGVVTSPTGAAVRDIINVAKRRNDAVVT 167


>gi|116671381|ref|YP_832314.1| exodeoxyribonuclease VII large subunit [Arthrobacter sp. FB24]
 gi|116611490|gb|ABK04214.1| Exodeoxyribonuclease VII large subunit [Arthrobacter sp. FB24]
          Length = 428

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 14/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66
           +     + +  LS  LK  ++       V G++        S  A+ +L+D  + I   A
Sbjct: 18  TSPDNPWPLQLLSQKLKAHIDRT-PSAWVEGQVIELNRRGGS--AFMTLRDVDAEISLPA 74

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
            IW   L++ +   E G   + + K   +  + +  + ++ + P G G LL  +E+ +  
Sbjct: 75  SIWSNVLDRQDVPLERGSRVVALLKAEFWLKTGRLNMSVKDIRPLGLGDLLARIERLRHA 134

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGLF+D  K  +P +P  I +IT       +D+L+  + R+P +   I  V VQG+ 
Sbjct: 135 LSMEGLFADSRKKRLPLLPHRIGLITGRDSDAKKDVLRNAALRWPAVEFEIREVAVQGNT 194

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              +I  A+  L+           D+I++ARGGG++EDL  F++E ++RA++N+S P++S
Sbjct: 195 AVSQIMGALRDLDADAH------VDVIVIARGGGALEDLLPFSNEDLIRAVSNASTPVVS 248

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHE D  + D  ADLRA TPT AA+  VP        +     +L   + RL++ + +
Sbjct: 249 AIGHEADRPILDDVADLRASTPTDAAKRIVPDVVEELDRVRQARDQLRRGVHRLVERESD 308

Query: 306 TLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            L        L   +  +S     + RL       +   + R      H+ ++++S    
Sbjct: 309 RLASLHSRPVLAAPEVMVSARAEDVARLSSRSRAAISTAVLRGADQILHLRSQVRSLSPQ 368

Query: 364 HNIQK 368
             + +
Sbjct: 369 QTLDR 373



 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 45/141 (31%), Gaps = 9/141 (6%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHMLREQTKNRIFYLHTHIKKLITRIEF 429
           + +   +Q  +Q+ +   R +  E     ++    +    +  +      + +L +R   
Sbjct: 283 EELDRVRQARDQLRRGVHRLVERESDRLASLHSRPVLAAPEVMVSARAEDVARLSSRSRA 342

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--------DTNNNFITQKRNLAT 481
            +S  +      +      ++S + + TL RGY  +Q        D     +        
Sbjct: 343 AISTAVLRGADQILHLRSQVRSLSPQQTLDRGYAVVQVSGTARAEDEPLAVVRHPSQAPE 402

Query: 482 KTRILINFFDGQANAIVINKA 502
            + + +    G  +A      
Sbjct: 403 GSDLFVRVAGGSFSARSTGGQ 423


>gi|312194580|ref|YP_004014641.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EuI1c]
 gi|311225916|gb|ADP78771.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EuI1c]
          Length = 424

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 12/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65
            S       V  +S  L   + + L  + V G+++          A+ +L+D  +   + 
Sbjct: 2   TSTPEEPLPVRTVSRALGDWI-NRLGRIWVEGQVTEISRRPGMSTAFLTLRDPVADVSLR 60

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
               +  L+ +     +G   +V GK +  PG     + +  + P G G LL  LE  ++
Sbjct: 61  LTCPRTVLDAVGPALTDGARVVVWGKPSFHPGRGTLALQVFEIRPVGVGALLARLEALRQ 120

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF+   K   PF+P  + +IT    A  RD+++    R+P +R++   V VQG 
Sbjct: 121 LLAAEGLFAASRKRRPPFLPGAVGLITGRASAAERDVVENARRRWPAVRIVTREVAVQGP 180

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               ++ +A+ +L+  +E       ++I++ARGGGS+EDL  F+DE ++RA+A +  P++
Sbjct: 181 LAAGQVIDALRELDADRE------VEVIVIARGGGSLEDLLPFSDEALLRAVAAARTPVV 234

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D  L DY AD+RA TPT AA+  VP      + +  L  R   ++   +  + 
Sbjct: 235 SAIGHEQDSPLLDYVADVRASTPTDAAKKVVPDVGEQAALVAQLRGRARRVVEHRLDRES 294

Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              T      AL    + L      ++ L R     +   +    R   H   R+++   
Sbjct: 295 RALTDLRGRPALAAPLRDLDRRSEAVEALTRRAFRCVTHAVDVAGRDVAHAAARLRALSP 354

Query: 363 IHNIQK 368
              + +
Sbjct: 355 AATLDR 360



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 1/154 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q  L  Q           R     +                 +      ++ L  R    
Sbjct: 271 QAALVAQLRGRARRVVEHRLDRESRALTDLRGRPALAAPLRDLDRRSEAVEALTRRAFRC 330

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489
           ++H +      V+     L++ +   TL RGY  +QD ++   I    +L     + +  
Sbjct: 331 VTHAVDVAGRDVAHAAARLRALSPAATLDRGYALVQDGSSGAIIRDPVDLTAHQTLQVRV 390

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523
             G   A V +  P +  P    QL      +  
Sbjct: 391 ARGSFAATVADPLPSQPPPDAASQLTAPSSGRPS 424


>gi|87125239|ref|ZP_01081085.1| Exonuclease VII, large subunit [Synechococcus sp. RS9917]
 gi|86167008|gb|EAQ68269.1| Exonuclease VII, large subunit [Synechococcus sp. RS9917]
          Length = 385

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 13/350 (3%)

Query: 9   SLDHPE-YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           S D P  Y+V EL+  +  ++E        V   +S  R     GH + +L D  + I A
Sbjct: 2   SADAPPTYTVQELNSSIGSLLERGFAPRFLVDATVS--RPQVKKGHLWMTLTDGDASISA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L ++ ++P +G    V+GK+  +   +   + +  + PS   T+    E  + +
Sbjct: 60  VAWASKLRQLAYVPGDGEGVRVVGKLNFWATRASLAVQVLDIRPS-LSTVQRRFEAVRAQ 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L +EG+     + P+P  P  IA++TS   + + D+L+    R+PL  V++  + VQG+ 
Sbjct: 119 LEQEGVIDPARRRPLPAYPSRIALLTSVPSSALADMLRTARERWPLAEVLVLAIPVQGEV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             +        L  L    +      I+LARGGGS EDL  F+D+ + R +A S +P+++
Sbjct: 179 AGRIR----EVLTRLYAASSRLGIKAIVLARGGGSREDLMVFDDDALCRLLAQSPVPLVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D T+AD  AD RA TPT A    +P +      +   + R  +    ++  +  
Sbjct: 235 GIGHEDDLTVADLVADHRAATPTAAIVRLLPCRSQALEDVTLRQRRWRDQRHWVLLRERQ 294

Query: 306 TLNSLLKALPNSDQTLSCSRYR---LDRLPRELEHNLEIIIFRKYRHFNH 352
            L    +        +   R R     RL           + R +     
Sbjct: 295 QLEHRQQQWLQHHPRIVLQRRRDRLEQRLQLLAALAPSRWLARGFAMLER 344



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 11/130 (8%), Positives = 40/130 (30%), Gaps = 6/130 (4%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            +     Q L  + L ++      H +  + + ++ +           ++      ++  
Sbjct: 262 RLLPCRSQALEDVTLRQRRWRDQRHWVLLRERQQLEHRQQQW------LQHHPRIVLQRR 315

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
              +    ++L + A    L RG+  ++  +   +     +     +++   DG+ +   
Sbjct: 316 RDRLEQRLQLLAALAPSRWLARGFAMLERPSGEVLRSVHEVEPGESLIVRLNDGRVDVQA 375

Query: 499 INKAPPKEQP 508
                     
Sbjct: 376 TAIHASDRSA 385


>gi|118462521|ref|YP_880474.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium 104]
 gi|118163808|gb|ABK64705.1| exodeoxyribonuclease VII, large subunit [Mycobacterium avium 104]
          Length = 379

 Score =  199 bits (507), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 11/336 (3%)

Query: 38  RGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTF 95
            G+++       S   +  L+D  + +       +  +        EG + +V GK + +
Sbjct: 2   EGQLAQVSLRPDSKTVFMVLRDPAADMSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFY 61

Query: 96  PGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155
            G   + + +  +   G G LL  +E+ ++ L  EGLF  + K PIPF+P +I +IT   
Sbjct: 62  TGRGTFSLRLSEIRAVGVGELLARIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRA 121

Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214
            A  RD+    + R+P +R  +    VQG     +I  A      L+E    P  D+I+L
Sbjct: 122 SAAERDVKTVAAGRWPAVRFAVRNTAVQGPNAVAQIVEA------LRELDRDPEVDVIVL 175

Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274
           ARGGGS+EDL  F+DE + RAIA    P+ISA+GHE D  L D  AD+RA TPT AA+  
Sbjct: 176 ARGGGSVEDLLPFSDETLCRAIAACRTPVISAVGHEPDNPLCDLVADVRAATPTDAAKKV 235

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLP 332
           VP     Q  + +L  R    +   +  +   L  +     L    + L+     + R  
Sbjct: 236 VPDTAAEQRLIDDLRRRSAQALRNWVSREQRALAQIRSRPVLAEPLRALTARAEEVHRAR 295

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             +  ++  +   +     H+  R+ +      + +
Sbjct: 296 SAIRRDVTRLTAAETERIGHLRARLATLGPAATLAR 331



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +  +    +      + +  + 
Sbjct: 241 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 297

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483
           I   ++    +    +      L +     TL RGY  +Q       + +    +    T
Sbjct: 298 IRRDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRTVGDAPAGT 357

Query: 484 RILINFFDGQANA 496
           R+ +   DG   A
Sbjct: 358 RLRVRVADGAVAA 370


>gi|256818732|ref|YP_003135799.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 8802]
 gi|256592472|gb|ACV03342.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 8802]
          Length = 384

 Score =  199 bits (507), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 109/315 (34%), Positives = 174/315 (55%), Gaps = 16/315 (5%)

Query: 10  LDHPE---YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--S 62
           +++P     SV+ ++ +L+ ++E +  L+ + V GE+S  +  H  G  +F+L D+   +
Sbjct: 1   MNNPPETALSVAGVTEYLQLLLEDDAQLNQLWVTGEVSSLQD-HRVG-LFFTLSDSQGQA 58

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            I  ++W G   K+   P+ G +  V G +  +P   +YQ+ +   I +G G      ++
Sbjct: 59  AIKCVVWNGQKGKLLHCPKLGSQIFVNGSVRLYPKKGEYQLTVFQAIETGDGLQTLRYQQ 118

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            + +L  EGLF  + K  +P  P+ IAV+++ T A   DI + +  R P L V++ P  V
Sbjct: 119 LRSRLQAEGLFDLERKRSLPPYPQTIAVVSALTAAAWGDIQRTLVQRNPGLHVLLSPATV 178

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG E P  I  AI ++          R +++ILARGGG++EDL+ FNDE +VRAI+ S I
Sbjct: 179 QGTEAPSSIERAIRRVAA------DGRAEVLILARGGGAVEDLFCFNDERVVRAISESPI 232

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P+I+ IGH+ D TLAD  AD  A TPT AAEMAVP    L +   + + RL   + R ++
Sbjct: 233 PVITGIGHQRDETLADLVADATAHTPTAAAEMAVPSYSALLAEHQHRQGRLLVSLERRLR 292

Query: 302 YKINTLNSLLKALPN 316
            + + L  L   L N
Sbjct: 293 QESDRLGRLKTRLKN 307



 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSF 452
             E       L    + R+      + +L TR++     +  ++     + +  + LQ+ 
Sbjct: 273 LAEHQHRQGRLLVSLERRLRQESDRLGRLKTRLKNLPASAASVRGATVKIHLLQQKLQAL 332

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
                LKRG++ ++  +   +     L+    ++I    G     V    P 
Sbjct: 333 DPNAVLKRGFSLVRTNDGEIVRDSVQLSEDLELVIQLPQGSIKVKVTEILPE 384


>gi|282859479|ref|ZP_06268584.1| exodeoxyribonuclease VII, large subunit [Prevotella bivia
           JCVIHMP010]
 gi|282587707|gb|EFB92907.1| exodeoxyribonuclease VII, large subunit [Prevotella bivia
           JCVIHMP010]
          Length = 433

 Score =  199 bits (507), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 88/510 (17%), Positives = 191/510 (37%), Gaps = 98/510 (19%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++    S+ +L+  +  ++   +     +  E+S        GH Y  F  KD       
Sbjct: 1   MNIQALSLKDLNELVSEVIRLQIRGSYWLEAELSQMNENR--GHCYMEFVQKDETSNNII 58

Query: 62  SRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +R     W  T ++I+             G++ +V      F     +  I+E + P   
Sbjct: 59  ARASGRCWASTWSQIKLYFERITGQTLHAGMKIMVQVSPQ-FHVQYGFSWIVEDINPEFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G ++    +   +L +EG+F  Q +  +      IA+I+S T A   D   +++     
Sbjct: 118 MGDMMRKRNEIIAQLKDEGVFDLQKELRLSSFASRIAIISSNTAAGYGDFCNQLANNEFG 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
              +  +F   +QG+    +I   + ++N  +E       D++++ RGGG+  DL  F+ 
Sbjct: 178 LTFQTELFQATMQGNRAEGDIIACLNEINAREEE-----FDVVVIIRGGGATADLSSFDT 232

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
            ++   +AN  +PII+ IGH+ D ++ D  + L+  TPT AA   +              
Sbjct: 233 LLLAENVANFPLPIITGIGHDRDESVLDLVSFLKVKTPTAAAAFLIE------------- 279

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                                          LS +  R+    + +   + + + R+Y H
Sbjct: 280 ------------------------------RLSSTLSRVLEAEKNIHDYVHLRLEREYNH 309

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            N++ +R+   F +           +++ H+++++++ +  +                  
Sbjct: 310 LNNLASRVPLLFSVVK--------TQQEFHLDRLLQKMITTMTAY--------------- 346

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
              +      ++    ++   +   I      +++  + L+S   +  LKRGY+    +N
Sbjct: 347 ---LHQEQHKVEIRYNQLLSGVQRTITDNKYHINLIEQKLKSLDPEILLKRGYSMTL-SN 402

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499
              IT    L     +     +G+  +IV 
Sbjct: 403 GKVITNANQLKDGDVLTTKLSEGEVKSIVK 432


>gi|290890779|ref|ZP_06553846.1| hypothetical protein AWRIB429_1236 [Oenococcus oeni AWRIB429]
 gi|290479551|gb|EFD88208.1| hypothetical protein AWRIB429_1236 [Oenococcus oeni AWRIB429]
          Length = 404

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 183/360 (50%), Gaps = 16/360 (4%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71
            +V  L+ +L      +  L  V + GEI GY+   SSG AYF L+D   S I A +   
Sbjct: 9   LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFELRDEDESSIRAYVSPT 66

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L    F  + G +  ++  +  +   +   + I S+ P+G G L   L + K KL +EG
Sbjct: 67  ILRGFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 126

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+      + + PK IAVITS TGAVI DI   I  R P L++ +F   VQGD   KE+
Sbjct: 127 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +A+ + +           D II+ARGGGS+ DLW FNDE +VR +++ S P+IS+IGHE
Sbjct: 186 VSAVKKADQS-------DADAIIIARGGGSMLDLWPFNDEQLVRLLSSLSKPVISSIGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D AAD R  TPT AA    P     +++L  L A ++  I +L++  +N    L
Sbjct: 239 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 298

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             +  L + DQ       +L  L   L ++      +  + F ++  ++ +   +  + +
Sbjct: 299 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 358



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 6/187 (3%)

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
              +  L    +  +  I          +    + +       K    IL+ + +++Q+ 
Sbjct: 218 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 277

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439
                 I    ++ +     L             F     ++ L  R+    + + +   
Sbjct: 278 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 337

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
              +  T  L + +    L RG++     +   I   + L  K  I I F  G A A + 
Sbjct: 338 QQFANLTAKLDALSPLKVLDRGFSLTFKGD-RLIKNAQQLKEKDHIKILFAKGSALAEIK 396

Query: 500 NKAPPKE 506
             +  + 
Sbjct: 397 EISDDRR 403


>gi|317506620|ref|ZP_07964411.1| exonuclease VII [Segniliparus rugosus ATCC BAA-974]
 gi|316255052|gb|EFV14331.1| exonuclease VII [Segniliparus rugosus ATCC BAA-974]
          Length = 295

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 15/300 (5%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P  +  + +   +SV  ++  +   ++  L  + + G+I+       S  A+ +L+D   
Sbjct: 5   PGDKGANAEDSPWSVKTVAMKIAGWIDR-LGSIWITGQIAELSARPGSRVAFVTLRDTAE 63

Query: 63  ----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118
               +I   +    L K     +EG E +V GK + +       I  + +   G G LL 
Sbjct: 64  NVSLQIMCPM---KLLKENPEIKEGSEVVVHGKPSFYTARGTLAIWADQIRAVGVGELLA 120

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177
            +E+ +K+L  EGL   + K P+PF+P  + ++T    A  +D+L     R+P +R  + 
Sbjct: 121 RIERLRKQLAAEGLTDPRRKRPLPFLPAGVGLVTGRASAAQQDVLSIARARWPQVRFHLR 180

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
            V VQG    + +  A      L+E +     ++IILARGGGS+EDL  F++E + RA+A
Sbjct: 181 EVAVQGPGAAQAVIAA------LRELQGLSGVEVIILARGGGSVEDLLTFSEEALCRAVA 234

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
              +P++SAIGHETD  L D  AD+RA TPT AA+  VP     +S L  +  R    + 
Sbjct: 235 ACPVPVVSAIGHETDRPLVDDVADVRAATPTDAAKRTVPDVAVERSRLHEMRGRSAAALR 294


>gi|116491234|ref|YP_810778.1| exodeoxyribonuclease VII large subunit [Oenococcus oeni PSU-1]
 gi|116091959|gb|ABJ57113.1| Exodeoxyribonuclease VII large subunit [Oenococcus oeni PSU-1]
          Length = 404

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 16/360 (4%)

Query: 15  YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71
            +V  L+ +L      +  L  V + GEI GY+   SSG AYF L+D   S I A +   
Sbjct: 9   LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFELRDEDESSIRAYVSPT 66

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
            L    F  + G +  ++  +  +   +   + I S+ P+G G L   L + K KL +EG
Sbjct: 67  ILRGFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 126

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190
           +F+      + + PK IAVITS TGAVI DI   I  R P L++ +F   VQGD   KE+
Sbjct: 127 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 185

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            +A+ + +           D II+ARGGGS  DLW FNDE +VR +++ S P+IS+IGHE
Sbjct: 186 VSAVKKADQS-------DADAIIIARGGGSTLDLWPFNDEQLVRLLSSLSKPVISSIGHE 238

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           TD TL D AAD R  TPT AA    P     +++L  L A ++  I +L++  +N    L
Sbjct: 239 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 298

Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             +  L + DQ       +L  L   L ++      +  + F ++  ++ +   +  + +
Sbjct: 299 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 358



 Score = 97.5 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 6/187 (3%)

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
              +  L    +  +  I          +    + +       K    IL+ + +++Q+ 
Sbjct: 218 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 277

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439
                 I    ++ +     L             F     ++ L  R+    + + +   
Sbjct: 278 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 337

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
              +  T  L + +    L RG++     +   I   + L  K  I I F  G A A + 
Sbjct: 338 QQFANLTAKLDALSPLKVLDRGFSLTFKGD-RLIKNAQQLKEKDHIKILFAKGSALAEIK 396

Query: 500 NKAPPKE 506
             +  + 
Sbjct: 397 EISDDRR 403


>gi|269125342|ref|YP_003298712.1| exodeoxyribonuclease VII large subunit [Thermomonospora curvata DSM
           43183]
 gi|268310300|gb|ACY96674.1| exodeoxyribonuclease VII, large subunit [Thermomonospora curvata
           DSM 43183]
          Length = 403

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 167/370 (45%), Gaps = 15/370 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
            + + S + P   V  +   +   +   L  + V G+I+        G  Y +L+D  + 
Sbjct: 1   MAMQTSAESPV-PVRTVLNAVAGWI-GRLGRIWVEGQITELNRRA--GTVYLTLRDPVAN 56

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +  +  +            G   ++  K   +     + +    + P G G LL  LE
Sbjct: 57  MSVRVVGPRAVFEAAGPAVTGGARVVICAKPDFWVNRGAFSLSALEVRPVGVGELLARLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K+ L  EGLF  + K P+PF+P ++ +I         D+L+    R+P +R  I    
Sbjct: 117 RLKQVLAAEGLFRPERKRPLPFLPAVVGLICGRESDAEHDVLRNARRRWPAVRFRIEHAA 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG +   E+  A+ +L+        P+ ++I++ARGGGS+EDL  F+DE +VRA+A + 
Sbjct: 177 VQGAQAVPEVLEALRRLDA------DPQVEVIVIARGGGSMEDLLPFSDEALVRAVAAAR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  AD+RA TPT AA+  VP        +  L  R    +   +
Sbjct: 231 TPVVSAIGHEQDSPLLDLVADVRASTPTDAAKHIVPDVREQLRLIRQLRDRGRRCLAGRL 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + ++  L ++     L +  + +     +++ L       L   + R+  H  H   R++
Sbjct: 291 ERELAWLEAMRSRPALADPVREVERKAEQVEGLRERARRALAASLEREADHLAHTRARLR 350

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 351 ALSPAATLER 360



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 58/155 (37%), Gaps = 5/155 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK-- 410
           ++  +++       +     + E+ + I Q+  +  R +    + ++A L  +R +    
Sbjct: 248 LVADVRASTPTDAAKHIVPDVREQLRLIRQLRDRGRRCLAGRLERELAWLEAMRSRPALA 307

Query: 411 ---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      ++ L  R    L+  ++     ++ T   L++ +   TL+RGY  +Q 
Sbjct: 308 DPVREVERKAEQVEGLRERARRALAASLEREADHLAHTRARLRALSPAATLERGYAIVQR 367

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            +   +           +L+    G+  A  +  A
Sbjct: 368 PDGTVLRAAAQAEPGEELLVRLAGGRLRATAVGPA 402


>gi|326575732|gb|EGE25655.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis CO72]
          Length = 536

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/522 (19%), Positives = 181/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+            ++S L+ +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKVIL-------GIESHLVKM 357

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +    + RL K     L           + +  S      +                 
Sbjct: 358 TRQAVATMERLTKITNTRLTMAKANSQRQIEQIQRSSLHAVNMA---------------- 401

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A++ +L + 
Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKAALIALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|317968034|ref|ZP_07969424.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CB0205]
          Length = 383

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/312 (29%), Positives = 152/312 (48%), Gaps = 9/312 (2%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
            P YSV+EL+  +  ++E        +   +S  R     GH + +L D  + I  ++W 
Sbjct: 7   IPRYSVAELNQAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLVDESASISGVVWS 64

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               ++ + P EG   LV+GK+  +   +   + I  + P+    +L   E+    L  E
Sbjct: 65  SQRERLSYQPSEGDGVLVVGKLNFWASRANLCVQILDIRPA-LSAVLRQFERVCALLEPE 123

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKE 189
           GL S + K P+P +P  IA++TS   + + D+L+    R+P   V + P+ VQG      
Sbjct: 124 GLLSAERKRPLPEMPAAIALLTSVPSSALADMLRTAQERWPATTVHVVPIPVQGMVAATI 183

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
                 +L  + E     + + I+LARGGG+ EDL  F+DE + R +A S IP+++ +GH
Sbjct: 184 R----KRLAEVLERSDELQIEAIVLARGGGAREDLAVFDDEELARDLAASPIPVVTGLGH 239

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E D T+AD  AD RA TPT A    +P +E L   L +  A +  +++  ++     L  
Sbjct: 240 EDDTTVADLVADYRAATPTAAVVALLPDREALSQGLQHRLAIVRQLMLHRLQQGQQRLAL 299

Query: 310 LLKALPNSDQTL 321
             + L     +L
Sbjct: 300 QRQRLEQCHPSL 311



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/134 (9%), Positives = 44/134 (32%), Gaps = 23/134 (17%)

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ-- 450
           L    + A               L   ++  +  +  ++ H+++     +++  + L+  
Sbjct: 248 LVADYRAATPTAAVVALLPDREALSQGLQHRLAIVRQLMLHRLQQGQQRLALQRQRLEQC 307

Query: 451 ---------------------SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
                                + + +  L+RG++ ++  + + +           + +  
Sbjct: 308 HPSLIIERERLRLQQRLQLLEALSPQRLLRRGFSLVRRADGSLLRSVSQSQAGDALRLEL 367

Query: 490 FDGQANAIVINKAP 503
            DG+  A+V   +P
Sbjct: 368 VDGKIEAVVEQVSP 381


>gi|256831985|ref|YP_003160712.1| exodeoxyribonuclease VII, large subunit [Jonesia denitrificans DSM
           20603]
 gi|256685516|gb|ACV08409.1| exodeoxyribonuclease VII, large subunit [Jonesia denitrificans DSM
           20603]
          Length = 467

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 13/369 (3%)

Query: 5   SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62
               +     + V  LS  +   ++  +  + + G+I        +G A+ +L+D     
Sbjct: 54  KAAETTRDNPWPVRVLSTKIAEYIDRMVP-LWIEGQIVQLNRRPGAGMAFVTLRDTEQDM 112

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +   I+   L        EG   +   K T +     +Q+    +   G G LL  +E+
Sbjct: 113 SLPLSIFARNLAAAG-PLTEGAHVVAQVKPTFWTKRGSFQLQASEIAQVGVGELLARIEQ 171

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K  L  EGLF    K P+PF+P+ + +I       + D+L     R+P ++  +  V V
Sbjct: 172 LKNSLAAEGLFDASRKKPLPFLPQRVGLICGRESEAMHDVLVNAQLRWPAVQFEVREVAV 231

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     +++ A      L+E       D+I++ARGGG++EDL  F++E +VR +A +  
Sbjct: 232 QGVNAVPQVSAA------LRELDDRDDVDVIVIARGGGAVEDLLPFSNESLVRLVAGART 285

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  + D  AD+RA TPT AA+  VP+    Q+ L +  +R+   +   + 
Sbjct: 286 PVVSAIGHERDTPILDLVADVRASTPTDAAKRIVPMVAEEQAGLDSALSRIRGALSAQLD 345

Query: 302 YKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +    +       L   D  +      + +    L   L+ ++ R     + +  ++++
Sbjct: 346 REYAGLSAVRSRPVLARPDTLIDGGAATITQARERLHVALDRLLLRAGGQVSELRAQVRA 405

Query: 360 DFLIHNIQK 368
                 +++
Sbjct: 406 LSPAATLER 414



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 5/166 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407
           ++  +++       ++    + E+Q  ++  + +    +  +   + A L  +R      
Sbjct: 302 LVADVRASTPTDAAKRIVPMVAEEQAGLDSALSRIRGALSAQLDREYAGLSAVRSRPVLA 361

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
           +    I      I +   R+   L   +      VS     +++ +   TL+RGY  +Q 
Sbjct: 362 RPDTLIDGGAATITQARERLHVALDRLLLRAGGQVSELRAQVRALSPAATLERGYAIVQG 421

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
            + + +     ++  + I +    G   A V          TK  +
Sbjct: 422 GDGSVVRDVAQVSVPSDITVTVARGSLTAAVTAVQAEVFPSTKDEK 467


>gi|326565745|gb|EGE15907.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC1]
          Length = 536

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|326560526|gb|EGE10908.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 7169]
          Length = 536

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDADQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|326570395|gb|EGE20435.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC8]
          Length = 536

 Score =  198 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/522 (20%), Positives = 181/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A          ++S L+ +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +    + RL K     L           + +  S      +                 
Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|326564877|gb|EGE15081.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis
           12P80B1]
          Length = 536

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|121583248|ref|YP_973684.1| exodeoxyribonuclease VII large subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120596506|gb|ABM39942.1| Exodeoxyribonuclease VII large subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 576

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 90/502 (17%), Positives = 167/502 (33%), Gaps = 27/502 (5%)

Query: 16  SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAII 68
           S+S L   +   V       V    E+       + GH Y  + +  +      +  A+I
Sbjct: 77  SLSSLLGDVSRAVAQAYKAGVWTLVEVVEL--RANGGHVYLEVSERDAHGAVLAKARAVI 134

Query: 69  WKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119
           W+ T + I              GI+ LV  +   F     + + I+++ P+   G L   
Sbjct: 135 WQSTASAILPEFERATGAQLAPGIKLLVRARP-VFKAQYGFSLDIDAIDPAYTLGELEAR 193

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVII 176
               + +L  EG+F+     P P+    + V++   GA + D              R   
Sbjct: 194 KRDIRTRLQAEGVFAANKNLPPPWDFHNVLVVSPMGGAGLGDFQAEADRLQAHGICRFTY 253

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
              + QG+  P EI +A+        G      D +++ RGGG++ DL   ND  + R +
Sbjct: 254 ALSRFQGEGAPAEIRDALQAALGQGTGTVATPFDAVVIIRGGGAVNDLAWLNDYSLARLV 313

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS-LINLEARLNNI 295
            +  IP+++ IGHE D TL D  A  R  TP+                   N E      
Sbjct: 314 CDLPIPVLTGIGHERDTTLLDEVAHARYDTPSKVIAGIEQRILQRVDEVKANFEQVSALA 373

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
                  +       +     + + L+  R    +    +  +    +          + 
Sbjct: 374 ARASQAAREQAGKLDMTVRLEALRHLAQGRQAASQSLAAIRIDAMQCMRSAAEQSRDALQ 433

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            +K+  L       R           QI       +     E  + +  + E+ +     
Sbjct: 434 AVKTKVLTQLADAKRGVPALWS----QIALGSEHALRTASAEGDSFIGSVLERARQDASR 489

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                   +  +       ++   T      R +     + TL+RG+  +++ +   +T+
Sbjct: 490 ARQVSSDALNTVSNSAKLLVRKAATDSQALIREIAGQGPEKTLQRGFAIVRNQSGKPLTR 549

Query: 476 KRNLATKTRILINFFDGQANAI 497
                    I I F DG+  AI
Sbjct: 550 ALQARDGAAIEIEFQDGRVAAI 571


>gi|116073872|ref|ZP_01471134.1| Exonuclease VII, large subunit [Synechococcus sp. RS9916]
 gi|116069177|gb|EAU74929.1| Exonuclease VII, large subunit [Synechococcus sp. RS9916]
          Length = 389

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/300 (30%), Positives = 150/300 (50%), Gaps = 10/300 (3%)

Query: 9   SLDHPE-YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           + D P  YSV EL+  +  ++E        V+   S  +     GH + +L D  + I A
Sbjct: 2   TADAPPTYSVRELNTAIGSLLERGFAPRFLVQATAS--KPQVKKGHLWITLTDGEASITA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           + W   L +++++P +G    V+GK+  +   +   + +  L PS   T+L   E  +  
Sbjct: 60  VAWASKLKQLDYVPADGEGVTVVGKLNFWAARATLAVQVLDLRPS-LNTVLRRFEAVRAL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L  EG+     + P+P  P+ +AV+TS   + + D+L+    R+PL  +++ P+ VQGD 
Sbjct: 119 LEAEGVIDPLKRRPLPTAPRRVAVLTSVPSSALADMLRTARERWPLSELLVVPIPVQGDV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             +        L  L++     + D ++LARGGGS EDL  F+DE + RAIA   +P+++
Sbjct: 179 SNRIC----SVLQRLRDAPEPLQADALVLARGGGSREDLMVFDDEQLCRAIATFPVPVVT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            IGHE D T+AD  AD RA TPT A    +P ++     L     RL N     ++ K  
Sbjct: 235 GIGHEDDLTVADLVADHRAATPTAAIVSLLPSRDTALLQLQERLRRLANQRQWWLERKRQ 294



 Score = 70.6 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 10/126 (7%), Positives = 35/126 (27%), Gaps = 26/126 (20%)

Query: 413 IFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRI--------------------- 448
           +    T + +L  R+  + + +   ++     +    +                      
Sbjct: 264 LPSRDTALLQLQERLRRLANQRQWWLERKRQVLWERRQRWQLLQPQVLLQQRRDQLLQRQ 323

Query: 449 --LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
             L++ + +  L RG+  ++            +   + +++   DG       +  P   
Sbjct: 324 QLLRALSPQRWLARGFAILESPEGTVFRSVSEVKKGSDLVVRLNDGTIAVQAQSIRPSSA 383

Query: 507 QPTKKC 512
           +     
Sbjct: 384 EQPVTP 389


>gi|326560350|gb|EGE10737.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis
           46P47B1]
          Length = 540

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 72  NNLADARLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 129

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 130 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 188

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 189 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 248

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 249 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 308

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 309 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 354

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 355 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 404

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 405 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 438

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 439 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 496

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 497 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 538


>gi|169836914|ref|ZP_02870102.1| exodeoxyribonuclease VII large subunit [candidate division TM7
           single-cell isolate TM7a]
          Length = 287

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 92/272 (33%), Positives = 146/272 (53%), Gaps = 11/272 (4%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
            P  +VS+         E+    + + GE+  +  I+ S   +F+LKD  S ++  + K 
Sbjct: 2   IPTLTVSDFIAITNQSFETIYPSIFIEGEVESF-SINQSKFVFFNLKDKESSVNCFMMKF 60

Query: 72  TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
               +    E+G+   V  +        K+ + I+S+ P G G++  + E  + KL  EG
Sbjct: 61  A---LHISIEDGMYVRVKARPKI-TQKGKFSLTIDSIRPIGEGSVKKSFELLRAKLATEG 116

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190
           LF +  K  +P++P+ IAVI+S   A   D ++    R   +  II   +VQG++ P+ I
Sbjct: 117 LFDESRKRILPWLPRKIAVISSKQAAGYIDFMKIADSRIKGVDFIICNAQVQGNDAPESI 176

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
            NAI + N +        PD+I + RGGGS +DL  FNDE +VRAIA S +P+I+ IGHE
Sbjct: 177 VNAIEKCNKMS-----NLPDVIAIVRGGGSADDLATFNDERVVRAIAASRVPVITGIGHE 231

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
            D TLAD  +D+RA TPT AA + +P  + ++
Sbjct: 232 IDTTLADLVSDIRAATPTHAATILLPSLDDVR 263


>gi|332877856|ref|ZP_08445594.1| exodeoxyribonuclease VII, large subunit [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684151|gb|EGJ57010.1| exodeoxyribonuclease VII, large subunit [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 431

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 91/504 (18%), Positives = 169/504 (33%), Gaps = 97/504 (19%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL-------KDNHSRIDA 66
            ++ EL+  ++  +E  L     ++ E+S  R  + +GH Y          +D  ++   
Sbjct: 4   LTLYELNGLVRGTLERTLQAEYWLQAELSEVREAY-NGHCYLEFVQKSVNGRDLVAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW G    ++ + E         G++ LV   +T       Y + +  + P+   G + 
Sbjct: 63  VIWAGMYRLLKPMFERETGRTLSPGLKVLVKVGVTFHELYG-YSLTVTDIDPAYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L  +G+ +D  +  +P     IAVI+S T A   D   ++     R    V
Sbjct: 122 RLRREILARLEADGILNDNKELSLPLSANRIAVISSATAAGYGDFCNQLLRNDYRLRFTV 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+     +  A+  +   ++       D +++ RGGG+  DL  F+  ++  
Sbjct: 182 RLFPAVMQGEHVESSVLAALDAVMARQDDW-----DAVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AA   +            LEA    
Sbjct: 237 ACAQFPLPVITGIGHERDDTVIDIVAHTRVKTPTAAAAFLI---------HHQLEAASRL 287

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
             +     +                     R R++RL   L      +  R  R    + 
Sbjct: 288 EAVAREIQQQAQGRM------------EGERLRVERLSARLSAAALQVRTRGERRLEQMA 335

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
             +        +   R  +      I + +                           R+ 
Sbjct: 336 TCLF-HAGRQRLSDERHRLDLYAGRIGRGIPV-------------------------RME 369

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
                ++ L  + E                             LKRGY+         + 
Sbjct: 370 RERFRLQLLQQKCEAA----------------------DPVLLLKRGYSMTF-CGGKLVR 406

Query: 475 QKRNLATKTRILINFFDGQANAIV 498
           +   L     I     +G+  ++V
Sbjct: 407 KASELKGGEEITTCLAEGEIRSVV 430


>gi|325964036|ref|YP_004241942.1| exodeoxyribonuclease VII large subunit [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323470123|gb|ADX73808.1| Exodeoxyribonuclease VII large subunit [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 446

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 98/399 (24%), Positives = 177/399 (44%), Gaps = 14/399 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P +   +     + +  LS  LK  ++       V G++       S+  AY +L+D  +
Sbjct: 21  PATAAETSPDNPWPLQLLSQKLKAHIDRT-PSAWVEGQVIELNRRGSN--AYLTLRDVDA 77

Query: 63  RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            +   A +W   L +     E G   + + K   +  + +  +++  + P G G LL  +
Sbjct: 78  EVSLPASVWTKVLERQNLPLERGSRVVALLKPEFWLKTGRLNMLVRDIRPVGLGDLLARI 137

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ ++ L  EGLF+D  K P+P +P  I +IT       +DI +  + R+P +   I  V
Sbjct: 138 ERLRQALSAEGLFADSRKKPLPLLPHRIGLITGRDSDAKKDIQRNAALRWPAVEFEIREV 197

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+    ++  A+  L+        P  D+I++ARGGG++EDL  FN E ++RA+A +
Sbjct: 198 AVQGNTAVAQVVRALRDLDAA------PEVDVIVIARGGGALEDLLPFNSEELIRAVAAA 251

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  L D  ADLRA TPT AA+  VP      + +     +L   + RL
Sbjct: 252 VTPVVSAIGHEADRPLLDDVADLRASTPTDAAKRIVPEVSEELAGVRQARVQLRRCMERL 311

Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  + + L        L   +  ++     ++RL R     +   + R      H+  ++
Sbjct: 312 VDRESDRLASLHSRPVLAAPEGLVTVRAEEIERLLRRSSAAVSSTVVRAADQLEHLKAQV 371

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           ++      + +    +    +   Q        +    +
Sbjct: 372 RALSPQKTLDRGYAVVELAGKRAGQSGTSGHAVVRRPAE 410



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 47/148 (31%), Gaps = 12/148 (8%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +++ +  +   + +++A LH        +  +      I++L+ R    +S  +
Sbjct: 298 RQARVQLRRCMERLVDRESDRLASLHSRPVLAAPEGLVTVRAEEIERLLRRSSAAVSSTV 357

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN----------FITQKRNLATKTRI 485
                 +      +++ + + TL RGY  ++                + +         +
Sbjct: 358 VRAADQLEHLKAQVRALSPQKTLDRGYAVVELAGKRAGQSGTSGHAVVRRPAEAPAGAPL 417

Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513
            I   +G+  A            T +  
Sbjct: 418 SIRVAEGRFGATSTGTLEQHATETGEPN 445


>gi|296113152|ref|YP_003627090.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis RH4]
 gi|295920847|gb|ADG61198.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis RH4]
          Length = 517

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 103/522 (19%), Positives = 179/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 49  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 106

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 107 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 165

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 166 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 225

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 226 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 285

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 286 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 331

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 332 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 381

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 382 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 415

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 416 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 473

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG A+A++ + +  K
Sbjct: 474 IHNAQTNESIHSTKTLQQNQSVKITFKDGTASAVIKDISTHK 515


>gi|159902646|ref|YP_001549990.1| exodeoxyribonuclease VII [Prochlorococcus marinus str. MIT 9211]
 gi|159887822|gb|ABX08036.1| Exodeoxyribonuclease VII [Prochlorococcus marinus str. MIT 9211]
          Length = 382

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 11/329 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66
           ++   P YSV EL++ + H++         +   +S  +    +GH + +L D H+ I A
Sbjct: 2   DTASLPSYSVQELNHAIGHLLSRGFSPRFYLHATVS--KSQLKNGHLWLTLTDGHASISA 59

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           +IW  TL K  + P +     ++GK+  +   +   + I  + PS   T+L   E  +K 
Sbjct: 60  VIWASTLKKFTYRPNDQDGIEILGKLNFWENRANLVVQIIEMRPS-ISTVLRKFEVVRKL 118

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185
           L++EGL  +  + P+P  P+ IAV+TS   + + DIL+    R+PL +V IFP+ VQGD 
Sbjct: 119 LIQEGLIDESRRRPLPNYPRNIAVLTSVPSSALADILRTAKERWPLTKVFIFPIPVQGDV 178

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
             K        L  L +       + I+LARGGGS EDL  F++E + R+ ++  IP+I+
Sbjct: 179 ASKIT----NVLANLVKHYRHFSIEAIVLARGGGSREDLMVFDNEELCRSFSSLPIPLIT 234

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
            +GHE D T+ D  AD R+ TPT A    +P +E  +   + +  RL +     I+ + +
Sbjct: 235 GLGHEDDLTVVDLVADHRSATPTAAIVDLLPSREIAKGHCLQMRHRLKDYFTWTIRKEKD 294

Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLP 332
             N  L      +    ++  +  LD+  
Sbjct: 295 LFNERLIKWKASSPLTLINRFKENLDKRS 323



 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 3/120 (2%)

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
           ++           + +  +        +      +  + K            I     ++
Sbjct: 263 LLPSREIAKGHCLQMRHRLKDYFTWTIRKEKDLFNERLIKWKA---SSPLTLINRFKENL 319

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              +R+L + + ++  KRG+  + + ++N I    ++    ++ I   DG   + V N  
Sbjct: 320 DKRSRLLLALSPESLFKRGFCIVTNQSSNAIRNCNDVEVADKLTIQLIDGYIESSVENIH 379


>gi|326571082|gb|EGE21106.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC7]
          Length = 536

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDADQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDVDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A                 +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E+ L  +  + +             L  +         ++ R      +           
Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|298372301|ref|ZP_06982291.1| exodeoxyribonuclease VII, large subunit [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298275205|gb|EFI16756.1| exodeoxyribonuclease VII, large subunit [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 434

 Score =  196 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 91/505 (18%), Positives = 188/505 (37%), Gaps = 96/505 (19%)

Query: 10  LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNH------S 62
           ++   +S+ EL+  +K +++      + +R +IS     +++GH Y  L +        +
Sbjct: 1   MEQQSFSLYELNITIKKLLKEIFLESLWIRAQISEI-HTNANGHCYIELIEYDTDRRVIA 59

Query: 63  RIDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113
           R  A IW  T   +         +  + G+E LV   I          + I  + P   +
Sbjct: 60  RQKATIWATTYKMLRPYFEQTAGYELQAGLEILVCCTIEMHESYG-LSLNIIDINPEYTT 118

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RF 170
           G +    EK   +L ++G+        +P +P+ IAVI+S T A   D   +I+     +
Sbjct: 119 GKIALDKEKILNRLSQDGVIELNRSLQLPALPRRIAVISSATAAGYEDFCHQINNNPYGY 178

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
                +F  ++QG+E  + +  A+  +    +       D +++ RGGG+  DL  F++ 
Sbjct: 179 RFHTELFDARMQGNETEQSVTAALDTIFERADE-----FDAVVIIRGGGATSDLSAFDNY 233

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            I  AIA   +P++  IGH  D T++D  A     TPT AA                   
Sbjct: 234 NIATAIAQFPLPVLCGIGHLRDETVSDIVAYKSVKTPTAAA------------------- 274

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                               +  +   ++ L     R+ R         +I I   +   
Sbjct: 275 -----------------EFFVDIIREQEERLVWLTERIRRAAATNVERQKIRINTVWYRL 317

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
           +++                ++ ++ +   +++                   L +L    +
Sbjct: 318 HYL---------------PKEILVGEYHRLDR------------------QLSLLLTAAR 344

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
           + +      +  L  R+   +  + ++    + +  + L++ +  NTL+RG+  I+  N 
Sbjct: 345 HTLRSSQHRVNYLQYRVLNYVRQRTETERHRIHLIEQRLEATSPTNTLRRGFAIIR-QNG 403

Query: 471 NFITQKRNLATKTRILINFFDGQAN 495
             +   + L  +    I F DG  +
Sbjct: 404 KTVRSAKALDIRQAFQIVFHDGTID 428


>gi|38638580|ref|NP_943166.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp.
           ND6]
 gi|34335368|gb|AAP44266.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp.
           ND6]
          Length = 492

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 82/518 (15%), Positives = 168/518 (32%), Gaps = 71/518 (13%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH 61
           P S  + ++    ++S     ++  + + +     V  E+S ++    +GH Y  + ++ 
Sbjct: 28  PVSAPDPIEQH-LTLSAYLTQIQKAIRAAVPDSCWVVAELSDFKRRP-NGHCYMDILESR 85

Query: 62  -----SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108
                ++    ++     K+          LP+ G+  L+  +   F     + +++  +
Sbjct: 86  EGAEVAKARCTMFANIAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVTGI 144

Query: 109 IPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167
            PS   G +   ++K    L E   F  Q   P P     +AV+     A + D  +   
Sbjct: 145 DPSYTLGDMQAKMQKIIASLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRDAE 204

Query: 168 CRFPLRV---IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224
                 V     F    QG +    I +A+  ++   + +     D + + RGGG+  DL
Sbjct: 205 QLAAAEVCGFEYFSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKSDL 261

Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284
              ND  +   +    +P+ + IGHE D  + D  A  R  TP+              S+
Sbjct: 262 AWLNDANLAAWVCRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEAST 321

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
                 R N +I+RL+  +   L+                R   + L  E    L+    
Sbjct: 322 ARAQVERANGMILRLVSGQAPHLDRAWSTFS---------RRVTETLHGEHRQLLQQ--- 369

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
                               ++ K R  +L +Q+   Q+ +     +             
Sbjct: 370 ------------------QSSLDKGRDRLLSQQRMALQLAQDRFSRLGAGL--------- 402

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                               +R+  +    I    + + +   +         L RG+  
Sbjct: 403 --------CVAERQRGLFAASRVASLSRALIAREISRLELACTVYDKTNPLALLGRGFAL 454

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           ++      I+  +      ++ + F DG   A V    
Sbjct: 455 VRGPGGEIISSAQQARDAGKLDLAFADGHVIAEVAKAQ 492


>gi|326577197|gb|EGE27091.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis O35E]
          Length = 536

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/522 (19%), Positives = 181/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + +K+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMQKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A          ++S L+ +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +    + RL K     L           + +  S      +                 
Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG  +A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534


>gi|332184255|gb|AEE26509.1| Exodeoxyribonuclease VII large subunit [Francisella cf. novicida
           3523]
          Length = 461

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/506 (19%), Positives = 189/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   +  +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLATGEKLSSDMKVLMKVTVN-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++      + 
Sbjct: 123 ARKIQILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCKF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC K ++ A  ++            D I+L RGGGS  DL  FN+ +   
Sbjct: 183 DIYEAKMQGAECAKSVSAAFTKI-----ETKAVNYDAIVLIRGGGSQADLDWFNNLLPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NTIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTSQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKAAISIARGLVKLYGKSMDMQYDSIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TLKRG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQIISVSIEPTLKRGFSITKTQDGRYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|332678473|gb|AEE87602.1| Exodeoxyribonuclease VII large subunit [Francisella cf. novicida
           Fx1]
          Length = 461

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 94/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADHIHNKFSLVTGEKLSSNMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     +  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKKFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  +        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGRSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|296100248|ref|YP_003617165.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida]
 gi|295443614|dbj|BAJ06493.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida]
          Length = 464

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/506 (16%), Positives = 163/506 (32%), Gaps = 70/506 (13%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KD--NHSRIDAII 68
            ++S     ++  + + +     V  E+S ++    +GH Y  +   +D    ++    +
Sbjct: 11  LTLSAYLTQIQKAIRAAVPDSCWVVAELSDFKRRP-NGHCYMDILESRDGAEVAKARCTM 69

Query: 69  WKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119
           +     K+          LP+ G+  L+  +   F     + +++  + PS   G +   
Sbjct: 70  FANVAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVTGIDPSYTLGDMQAK 128

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV---II 176
           ++K    L E   F  Q   P P     +AV+     A + D  +         V     
Sbjct: 129 MQKIIASLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRDAEQLAAAEVCGFEY 188

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           F    QG +    I +A+  ++   + +     D + + RGGG+  DL   ND  +   +
Sbjct: 189 FSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKSDLAWLNDANLAAWV 245

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
               +P+ + IGHE D  + D  A  R  TP+              S+      R N +I
Sbjct: 246 CRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEASTARAQVERANGMI 305

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
           +RL+  +   L+                R   + L  E    L+                
Sbjct: 306 LRLVSGQAPHLDRAWSTFS---------RRVTETLHGEHRQLLQQ--------------- 341

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                   ++ K R  +L +Q+   Q+ +     +                         
Sbjct: 342 ------QSSLDKGRDRLLSQQRMALQLAQDRFSRLGAGL-----------------CVAE 378

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
                   +R+  +    I    + + +   +         L RG+  ++      I+  
Sbjct: 379 RQRGLFAASRVASLSRALIAKEISRLELACTVYDKTNPLALLGRGFALVRGPGGEIISSA 438

Query: 477 RNLATKTRILINFFDGQANAIVINKA 502
           +      ++ + F DG   A V    
Sbjct: 439 QQARDAGKLDLAFADGHVIAEVAKAQ 464


>gi|254369144|ref|ZP_04985156.1| hypothetical protein FTAG_00079 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122094|gb|EDO66234.1| hypothetical protein FTAG_00079 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 461

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|89256140|ref|YP_513502.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica LVS]
 gi|115314612|ref|YP_763335.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156502164|ref|YP_001428229.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|167010595|ref|ZP_02275526.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica FSC200]
 gi|254367463|ref|ZP_04983489.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|290953289|ref|ZP_06557910.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295313495|ref|ZP_06804091.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89143971|emb|CAJ79193.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica LVS]
 gi|115129511|gb|ABI82698.1| exodeoxyribonuclease VII [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253279|gb|EBA52373.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. holarctica 257]
 gi|156252767|gb|ABU61273.1| exodeoxyribonuclease VII, large subunit [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 461

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 95/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     +  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKKFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|254374568|ref|ZP_04990049.1| hypothetical protein FTDG_00741 [Francisella novicida GA99-3548]
 gi|151572287|gb|EDN37941.1| hypothetical protein FTDG_00741 [Francisella novicida GA99-3548]
          Length = 461

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|118497758|ref|YP_898808.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. novicida U112]
 gi|194323730|ref|ZP_03057506.1| OB-fold nucleic acid binding domain protein [Francisella tularensis
           subsp. novicida FTE]
 gi|118423664|gb|ABK90054.1| exodeoxyribonuclease VII large subunit [Francisella novicida U112]
 gi|194322094|gb|EDX19576.1| OB-fold nucleic acid binding domain protein [Francisella tularensis
           subsp. novicida FTE]
          Length = 461

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTNIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|254373116|ref|ZP_04988605.1| exodeoxyribonuclease VII [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570843|gb|EDN36497.1| exodeoxyribonuclease VII [Francisella novicida GA99-3549]
          Length = 461

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|237785190|ref|YP_002905895.1| exodeoxyribonuclease large subunit [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237758102|gb|ACR17352.1| exodeoxyribonuclease large subunit [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 424

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 14/365 (3%)

Query: 9   SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA-I 67
           +     + V  L+  +   + S L  V V G+++  +        + +L+D  + +   +
Sbjct: 20  TSPEAPWPVRILNRKIGDWI-SKLGSVWVEGQLTQMKQTRY--WTFLTLRDVEAEMSIEL 76

Query: 68  IWKGTL-NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           I K  +   +      G   +V+GK        + ++ I  + P G G LL  +E+ +K 
Sbjct: 77  IAKNHVITSLPTPLSHGDRVIVLGKPNYSVSRGQLKLSITDIRPVGIGELLARIEQLRKL 136

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185
           L  EGL + + K P+P +P+ I +IT    A  RD++     R+P + +      VQG  
Sbjct: 137 LAAEGLLAPERKKPLPVLPRRIGLITGRGSAAERDVISIAQERWPAVNIRTLNPPVQGAS 196

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
              E+  A+  L+        P  D+II+ARGGGS+EDL  F+DE +VR ++    PIIS
Sbjct: 197 AVPEVKEALTILDR------DPTVDVIIVARGGGSVEDLLPFSDESLVRHVSTLRTPIIS 250

Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           AIGHETD  + D  ADLRA TPT AA+  V         + +   R    + R + Y+ +
Sbjct: 251 AIGHETDNPVLDDVADLRAATPTDAAKRVVIDMATELEGIRDCRQRGQQALFRWLDYERD 310

Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            LN L +   + +    ++     + R    +  N+ +++ R      H+  ++ +    
Sbjct: 311 RLNDLRQRPVMADPMTPINRHAENVARDASSIRRNITLLLERANSEIAHLRGQVSALGPS 370

Query: 364 HNIQK 368
             + +
Sbjct: 371 ATLAR 375



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 58/159 (36%), Gaps = 9/159 (5%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409
             +++       ++    +  + + I    ++  + +F     +   L+ LR++      
Sbjct: 265 ADLRAATPTDAAKRVVIDMATELEGIRDCRQRGQQALFRWLDYERDRLNDLRQRPVMADP 324

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--- 466
              I     ++ +  + I   ++  ++  ++ ++     + +     TL RGY+ +Q   
Sbjct: 325 MTPINRHAENVARDASSIRRNITLLLERANSEIAHLRGQVSALGPSATLARGYSIVQVQR 384

Query: 467 -DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
               +   T        +++ I   DG   A  ++ +P 
Sbjct: 385 PGEESEVATSIDQTPPGSQLRIRLNDGSIVAATMSTSPA 423


>gi|55376498|ref|YP_134350.1| exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC
           43049]
 gi|55229223|gb|AAV44644.1| probable exodeoxyribonuclease VII large subunit [Haloarcula
           marismortui ATCC 43049]
          Length = 350

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 16/290 (5%)

Query: 1   MNPFSQKNSLDHPE-----YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHA 53
           M                   SVS+L+  +  +VE    L  V   GE++      +S   
Sbjct: 1   MADAPDTERQAVEPEAGDVLSVSQLNDRIASVVEDAPALDGVRCIGEVTDL--HQNSTAL 58

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           YF+L D  + +  +IW     K++   E+G E ++ G I  +    K  +    +I  G 
Sbjct: 59  YFTLTDGDAELPCMIWANRYRKMDAELEDGTEVILEGDIDYWTEGGKIDLKPWEVIVVGD 118

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-L 172
           G    A+E+ + +L E G F D+ K   P  P+ + V+TS  G    DI   I  + P +
Sbjct: 119 GDQAAAVERLRSELEERGWFDDEQKQRPPAFPERVGVVTSLRGDARYDIQSAIHEQDPTV 178

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
            +++    VQG E P  IA      N +         D II+ RGGGS  +L  FN E +
Sbjct: 179 DILVKDATVQGSEAPTSIA------NGIHHLDRSEDVDSIIVGRGGGSDSNLQAFNTERV 232

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
             AI  ++ PI++AIGH  D  +AD  AD+ A TPT A E     +    
Sbjct: 233 AEAIFTANTPIVTAIGHTDDRLIADRVADMAAITPTAAGEYIAKSRNDFL 282


>gi|284033452|ref|YP_003383383.1| exodeoxyribonuclease VII large subunit [Kribbella flavida DSM
           17836]
 gi|283812745|gb|ADB34584.1| exodeoxyribonuclease VII, large subunit [Kribbella flavida DSM
           17836]
          Length = 406

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 13/370 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62
            + + S D P  +V  ++  +   + + L  V V G+++       +   + +L+D  + 
Sbjct: 1   MALETSPDAPA-AVRTIANGIAGWI-NQLGAVWVEGQLTDVSIGRGTTTVFGTLRDTDAD 58

Query: 63  -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +     +     ++    +G   +V  K   F       + +  +   G G LL  +E
Sbjct: 59  ISLRFTCNRRVFEAVDPPVTDGSRVVVNAKPNFFARRGTLALAVTEIRHVGIGELLARIE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           + K+ L  EGLF+   K  +PF+P  I +I     A  RD+L+    R+P +   I    
Sbjct: 119 RLKQLLGAEGLFAAHRKKRLPFLPHTIGLICGRDSAAERDVLENAKRRWPAVAFRIEYAS 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG     E+  A+ +L            ++I++ARGGGS+EDL  F+DE ++RA++ + 
Sbjct: 179 VQGPAAAGEVMTALRKL------DGDDSVEVIVIARGGGSLEDLLPFSDEGLLRAVSQAR 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGHE D  L D  ADLRA TPT AA+  VP        +  L  R    I   +
Sbjct: 233 TPVVSAIGHEPDSPLLDLVADLRASTPTDAAKRIVPDVREELDGVRLLRDRGLRAITSWL 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + + L ++     L      L      +  L       L   + R      H +  ++
Sbjct: 293 DREAHALAAIRSRPALAAPATDLQRRSDEIAALVDRNRRTLTHRLDRAGDDLAHRLASVR 352

Query: 359 SDFLIHNIQK 368
           +      +++
Sbjct: 353 ALSPKATLER 362



 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 60/157 (38%), Gaps = 5/157 (3%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK-- 410
           ++  +++       ++    + E+   +  +  + LR I      +   L  +R +    
Sbjct: 250 LVADLRASTPTDAAKRIVPDVREELDGVRLLRDRGLRAITSWLDREAHALAAIRSRPALA 309

Query: 411 ---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
                +      I  L+ R    L+H++      ++     +++ + K TL+RGY+ +Q 
Sbjct: 310 APATDLQRRSDEIAALVDRNRRTLTHRLDRAGDDLAHRLASVRALSPKATLERGYSVLQL 369

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
            +   + +   ++    +     DG+ +  V +K   
Sbjct: 370 ADGTAVRELDQVSAGDLLHARVSDGRFDVEVTSKESK 406


>gi|308375361|ref|ZP_07668003.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu007]
 gi|308346558|gb|EFP35409.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium
           tuberculosis SUMu007]
          Length = 385

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 11/336 (3%)

Query: 38  RGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTF 95
            G+++       +   +  L+D  + +       +  +        EG++ +V GK + +
Sbjct: 2   EGQLAQITMRPDAKTVFMVLRDPAADMSLTVTCSRDLVLSAPVKLAEGVQVVVCGKPSFY 61

Query: 96  PGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155
            G   + + +  +   G G LL  +++ ++ L  EGLF  + K PIP++P +I +IT   
Sbjct: 62  TGRGTFSLRLSEIRAVGIGELLARIDRLRRLLDAEGLFDPRLKRPIPYLPNMIGLITGRA 121

Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214
            A  RD+    S R+P  R  +  V VQG     +I  A      L+E    P  D+I+L
Sbjct: 122 SAAERDVTTVASARWPAARFAVRNVAVQGPNAVGQIVEA------LRELDRDPDVDVIVL 175

Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274
           ARGGGS+EDL  F+DE + RAIA    P++SA+GHE D  L D   DLRA TPT AA+  
Sbjct: 176 ARGGGSVEDLLPFSDETLCRAIAACRTPVVSAVGHEPDNPLCDLVVDLRAATPTDAAKKV 235

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLP 332
           VP     Q  + +L  R    +   +  +   +  L     L +    +S     + R  
Sbjct: 236 VPDTAAEQRLIDDLRRRSAQALRNWVSREQRAVAQLRSRPVLADPMTMVSVRAEEVHRAR 295

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L  NL +++  +     H+  R+ +      + +
Sbjct: 296 STLRRNLTLMVAAETERIGHLAARLATLGPAATLAR 331



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R     +++  + +     R      + +      +       +      + +  + 
Sbjct: 241 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 297

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477
           +   L+  + +    +      L +     TL RGY  +Q               +    
Sbjct: 298 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 357

Query: 478 NLATKTRILINFFDGQANAI 497
           +    T++ +   DG   A+
Sbjct: 358 DAPEGTKLRVRVADGALAAV 377


>gi|297626867|ref|YP_003688630.1| exodeoxyribonuclease VII large subunit [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296922632|emb|CBL57209.1| Exodeoxyribonuclease VII large subunit [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 457

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 108/356 (30%), Positives = 174/356 (48%), Gaps = 11/356 (3%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           +S +   +K  VE  ++ + V  ++   R    +   + +L+D  S + A +   T    
Sbjct: 52  LSTVVGWVKGWVER-MNTIWVEAQVIELRRRAGAYMHFLTLRDTSSEVSAQVTATTAVLD 110

Query: 77  EFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
           +  P  EG   L   +   +  +++       L  +G G LL  LEK K+KL  EGLFS 
Sbjct: 111 QAGPLTEGTTVLAKVRPRVWNKTARLSFECFELRIAGEGQLLAELEKLKRKLQAEGLFSP 170

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
             K P+P IP++I +IT    A  RD+L     R+P  R  +    VQG     ++  A 
Sbjct: 171 ARKKPLPMIPRLIGLITGADSAAERDVLTNTQRRWPSARFRVRHALVQGPSSVADVTAA- 229

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
                L E    P+ D+I++ARGGGS+E+L  F+DE +VRA+A +S P++SAIGHE D  
Sbjct: 230 -----LAELDADPQVDLIVIARGGGSLENLLPFSDEGLVRAVAAASTPVVSAIGHEPDTP 284

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313
           + D  ADLRA TPT AA+  VP     + ++  L AR    II  +      LN L+   
Sbjct: 285 ILDLVADLRASTPTDAAKRIVPDAAEERHAVAQLVARARTAIIARVSNAQAELNQLVSRP 344

Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            L +    LS    +L+ +   L+  ++ ++  +     H + RI++      +++
Sbjct: 345 VLSDPSAALSGHTEQLEMMRFRLDTAIDRLLDHERTDVAHAVQRIRAMSPKATLER 400



 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 52/151 (34%), Gaps = 2/151 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + R  + +        +   +     E  + ++    +       +      ++ +  R
Sbjct: 309 AEERHAVAQLVARARTAIIARVSNAQAELNQLVSR--PVLSDPSAALSGHTEQLEMMRFR 366

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++  +   +    T V+   + +++ + K TL+RGY  + D +N  +T         +++
Sbjct: 367 LDTAIDRLLDHERTDVAHAVQRIRAMSPKATLERGYAIVADADNASVTSVTQTEPGDQLM 426

Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           +   DG+    V +  P    P         
Sbjct: 427 VFLSDGRLVVEVDDTLPGGSGPAGADDPPAR 457


>gi|93005919|ref|YP_580356.1| exodeoxyribonuclease VII large subunit [Psychrobacter
           cryohalolentis K5]
 gi|92393597|gb|ABE74872.1| Exodeoxyribonuclease VII large subunit [Psychrobacter
           cryohalolentis K5]
          Length = 514

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 94/520 (18%), Positives = 183/520 (35%), Gaps = 68/520 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61
           +N+L+     +S+    +  +++   +H V V+ EI         GH YF L  KD+   
Sbjct: 36  ENNLEDTVLRLSDYLSAVDMVIKQTFNHRVWVKAEIRNLSSK--GGHYYFELAEKDDDGK 93

Query: 62  --SRIDAIIWKGTLNKI--EFLPEEGI----EFLVIGKITT-FPGSSKYQIIIESLIPS- 111
             +     +W+    ++  +F    G+    +  V+ K++  F     + + IE + PS 
Sbjct: 94  VIASCRGNLWRFKAARVLAKFERATGMPLDRDLTVLLKVSAGFHAQYGFSLTIEDIDPSY 153

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G L     +   +L  EGL +   + P PF  + + VI     A + D     +    
Sbjct: 154 TLGDLARQYAEMVDRLAGEGLLNLNQQLPTPFDIEQVLVIAPEKAAGLGDFQADANRLAS 213

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
                        QG+  P EI  AI+      E      PD++++ RGGG++ DL + N
Sbjct: 214 TGACHFHYHNATFQGNHAPAEIRQAIISAQQQFENTYQRLPDLLVIIRGGGAVGDLAYLN 273

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   +P+   IGHE D  + D  A     TP+      +             
Sbjct: 274 DYELAALVAEQPVPVWVGIGHERDKVILDEVAHTSFDTPSKVIAAIM------------- 320

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            A L  ++ + ++Y++    +  + L  ++Q  +    ++          L+      +R
Sbjct: 321 -AHLAQLVTQTLQYQMQIKQAAQRQLNTAEQQTARQLSQIQSQTIGQLTALQKDSAYAWR 379

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                 +                                 R +    ++   +    +  
Sbjct: 380 SIQQSAH---------------------------------RQVKQAARQASELHIQTQAS 406

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
              ++    T+ K     I      ++       +    I+        LK+GY+ + D 
Sbjct: 407 AYQQLSLASTYSKNHQKIIMQSAQQQLIQAQRDSAHLRDIVLLHRPSRVLKQGYSMLTDE 466

Query: 469 -NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
            +   +T    L  +  I I   DG+A A +I+    K+ 
Sbjct: 467 QDQRILTSSNQLYPEQTIHIVLKDGKAKAQIIDIKMDKKP 506


>gi|256371969|ref|YP_003109793.1| Exodeoxyribonuclease VII [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008553|gb|ACU54120.1| Exodeoxyribonuclease VII [Acidimicrobium ferrooxidans DSM 10331]
          Length = 529

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 103/511 (20%), Positives = 187/511 (36%), Gaps = 44/511 (8%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN---HSRIDAIIWKG 71
             VSEL   +   +  +L  V VRG +   +     GH YF L D+    +R+ A IW  
Sbjct: 5   LGVSELIGRVNDAL-GSLGLVTVRGVVESAKASQR-GHLYFDLIDDGDRQARVSAAIWAS 62

Query: 72  TLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
               IE            +G   +V G++  +       + I+ +          A  +R
Sbjct: 63  RRAGIETALRRAGLGSLGDGALVVVSGRLQVYAPRGSMSLSIDRVEIEAMLDARAATRQR 122

Query: 124 K-KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKV 181
             ++L  EG+     + P+P +   IA++ S  G V  D+ + ++   F   V ++  +V
Sbjct: 123 HLRQLAAEGIVDANRRVPVPAVALRIALVASRDGVVREDVRRALADTGFAFTVRLYHTEV 182

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
                      A +Q+          +PD++++ARGGGS  DL  F+D  + RA+A + +
Sbjct: 183 STRA-------ASVQIRRALAAAIADQPDLVLVARGGGSEGDLAAFDDLDLARAVATAPV 235

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS---------------SLI 286
           PI  AIGH  D  L  Y A+     P  AA+  V   E  +                 L 
Sbjct: 236 PIWVAIGHAVDQPLLAYVANCAFDVPQSAAKALVARVEDFREGLATEIATAIHHARARLD 295

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
                   I   +  +    L +  ++LP+     + +  RL    R       +I  R 
Sbjct: 296 RGWLHTRQIAHAIEAHSQRRLAAAHRSLPSPSVLDARTDQRLTN-ERHTLPATSVIDARV 354

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKKEKIAILHM 404
                     + +     +I + R  +  +Q   H  ++           + E  A    
Sbjct: 355 RARLARSRAVLTAARSARDIVRLRVRLEVRQLVDHRRELAAATSAIATAHRTELHARQRR 414

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYT 463
           L      R  +    +  +   +      + +     + +  R ++   +    L+RG+ 
Sbjct: 415 LTRAAARRRAHHDAALAAVRRHLTAASYRRARRDRRGLELLARRIEGLASP---LERGFA 471

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA 494
            I D    ++ +   +AT   +  +F DG A
Sbjct: 472 MITDPTGTWLRRADAIATHAIVHAHFVDGVA 502


>gi|208779823|ref|ZP_03247167.1| OB-fold nucleic acid binding domain protein [Francisella novicida
           FTG]
 gi|208744278|gb|EDZ90578.1| OB-fold nucleic acid binding domain protein [Francisella novicida
           FTG]
          Length = 461

 Score =  193 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQINQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N   
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLTK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|187931553|ref|YP_001891537.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712462|gb|ACD30759.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 461

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  D+  FN+     
Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADIDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|124024875|ref|YP_001013991.1| exonuclease VII, large subunit [Prochlorococcus marinus str.
           NATL1A]
 gi|123959943|gb|ABM74726.1| Exonuclease VII, large subunit [Prochlorococcus marinus str.
           NATL1A]
          Length = 386

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 14/354 (3%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKD 59
           M             YSV EL+  +  ++         V   +S  +     GH + +L D
Sbjct: 1   MTDLKNAKQ-SLNTYSVKELNESIGLLLSRGFAPKFIVEATVS--KSQIKKGHLWLTLTD 57

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
             + +DA+ W  T+  ++FLP++    ++IGK+  +   ++  + +  + PS   T+L  
Sbjct: 58  GKASVDAVAWSSTIKSLKFLPKQDDGVVIIGKLNFWESQARVSVQVFDIRPS-ISTVLRK 116

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178
            E  K KL +EGL  D  +  +P  P  I ++TS   + + D+L+    R+PL ++ I P
Sbjct: 117 FEIVKSKLFKEGLIDDSLRKKLPKYPHSIGILTSVPSSALADMLRTAKERWPLTKLQIIP 176

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
           + VQGD   K      L+    K  +   + + +I+ARGGGS EDL  F+ E+I R IA 
Sbjct: 177 IPVQGDNANK------LKSILSKLKKNKLKLEALIIARGGGSREDLMLFDSEIIAREIAT 230

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             IP+I+ IGHE D T+AD  +D R+ TPT A    +P +E  ++  +  +  L   +  
Sbjct: 231 FPIPVITGIGHEDDLTVADLVSDHRSATPTAAIVDLLPSREIEKNKFLQNKKLLKYYLKL 290

Query: 299 LIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
             +    +L +        +    +   R R++ +   L       + ++    
Sbjct: 291 FFQNAKKSLITKKSIFQSYSPRLLIKNKRTRINYMYDILNALSPRKLLKRGFAL 344



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +    +         KK     L +  +  K  +    +  +    R+       IK+  
Sbjct: 266 LLPSREIEKNKFLQNKKLLKYYLKLFFQNAKKSLITKKSIFQSYSPRL------LIKNKR 319

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           T ++    IL + + +  LKRG+  I D + N I   +N+    ++++ F DG+  A V 
Sbjct: 320 TRINYMYDILNALSPRKLLKRGFALITDESGNSIYSVKNIKENDKLIVQFCDGKITAEVD 379

Query: 500 N 500
           +
Sbjct: 380 S 380


>gi|198275700|ref|ZP_03208231.1| hypothetical protein BACPLE_01875 [Bacteroides plebeius DSM 17135]
 gi|198271329|gb|EDY95599.1| hypothetical protein BACPLE_01875 [Bacteroides plebeius DSM 17135]
          Length = 434

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 80/512 (15%), Positives = 183/512 (35%), Gaps = 98/512 (19%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           +++   S+ EL+  ++  + S L     V+ E+S  R  + SGH Y  F  KD       
Sbjct: 1   MENKPLSLLELNSLVRRSITSCLPDEYWVQAELSDVRVNY-SGHCYLEFVQKDATGNALL 59

Query: 62  SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   IIW     ++   F  E G       + LV   +        Y + + ++ P+  
Sbjct: 60  AKARGIIWANVFTRLRSYFERETGQAFVSGLKVLVKVTVDFHELYG-YSLTVVNIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G ++   ++  ++L EEG+ +   +  +P + + IAVI+S T A   D   ++      
Sbjct: 119 LGDMVRRRKEILRQLDEEGILTLNKELELPVLTQRIAVISSATAAGYGDFCNQLLHNSFG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +F   +QG++  + I  A+ ++N+ ++       D++++ RGGG+  DL  F+ 
Sbjct: 179 FVFYPRLFQAIMQGEQVEQSIIQALDRINSTRDNW-----DVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
                                      D AA+           +     + +   + +  
Sbjct: 234 Y--------------------------DLAANCAQFPLPIITGIGHERDDTVLDMISHTR 267

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                               +      ++  ++  R     L    E   + +     + 
Sbjct: 268 --------------------VKTPTAAAEFLINHVRQTAQELETYEEVIYQEVPRLLQQE 307

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
              + + I        ++  R++   +Q+  +  +K   +   L++  ++ ++       
Sbjct: 308 KQRLDSFITRIPGQVQMRLQRENF--RQEKFQNRMKTAWQSRLLQENYRLQLMP------ 359

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
                           R+   L ++++     + +  + + S + +  LK+GY+     +
Sbjct: 360 ----------------RLLSALQNRVQRETHRLELLAQRVDSASPEKLLKKGYSLTLL-D 402

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501
              +T    L     +      G+  + VINK
Sbjct: 403 GKVVTDASQLKPGDEVETRLAKGKFRSKVINK 434


>gi|326565384|gb|EGE15561.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis
           103P14B1]
 gi|326573373|gb|EGE23341.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis
           101P30B1]
          Length = 536

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 106/522 (20%), Positives = 182/522 (34%), Gaps = 79/522 (15%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61
           N+L     S+S+    +K +++ +  H V VR EI         GH YF L +       
Sbjct: 68  NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125

Query: 62  -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111
            +   A +W+     +            + GI  LV    +       + + I  + P  
Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDVDPNY 184

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168
             G +  A  + KK+L EEGL     K+ IPF  + + VI     A + D          
Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
               +        QG+  P EI  AI +     +      PD++++ RGGG++ DL + N
Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   IP+   IGHE D  + D  A     TP+ A          ++S L+ +
Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +    + RL K     L           + +  S      +                 
Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                                      K+ ++ Q+        F   +EK A+  +L + 
Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464
            K+ +  +          ++    + +    + +    R LQS          LK+GYT 
Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492

Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           I +   N  I   + L     + I F DG A+A++ + +  K
Sbjct: 493 IHNAQTNESIHSTKTLQQNWSVKITFKDGTASAVIKDISTHK 534


>gi|332978574|gb|EGK15280.1| exodeoxyribonuclease VII [Psychrobacter sp. 1501(2011)]
          Length = 503

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/510 (17%), Positives = 181/510 (35%), Gaps = 67/510 (13%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61
            N L++    +S+    ++ +++    H V V+ EI         GH YF L  KD+   
Sbjct: 34  DNELENTVLRLSDYLAAVELVIKETFRHSVWVKAEIRNLSSK--GGHYYFELAEKDDDGK 91

Query: 62  --SRIDAIIWKGTLNKI--EFLPEEGIE----FLVIGKIT-TFPGSSKYQIIIESLIPS- 111
             +     +W+   +++  +F    G++      V+  +T +F     + + I  + PS 
Sbjct: 92  VIASCRGNLWRFKASRVLTKFERATGMKLERDVTVLLNVTASFHPLYGFSLAINDIDPSY 151

Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISC 168
             G L        ++L  EGL +   + P PF  + + VI     A + D      ++  
Sbjct: 152 TLGDLARQYAAMLERLSGEGLLNLNKQLPAPFDIEHVLVIAPEKAAGLGDFRADADKLES 211

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
                        QG+  PKEI +AI +       +    PD++++ RGGG++ DL + N
Sbjct: 212 TNACHFHYHYATFQGNHAPKEIRHAITKGMLTFRKQYERDPDVMVIIRGGGAVGDLAYLN 271

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           D  +   +A   +P+   IGHE D  + D  A     TP+      V     L       
Sbjct: 272 DYELAALVAEQPVPVWVGIGHERDSVILDEVAHTSFDTPSKVIAGIVNHLASLMQRTQGY 331

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
              + +                                +           ++       +
Sbjct: 332 ADAIQH-------------------------LSQQQLTQAAMATERQFSAIQSSSTHNLQ 366

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
           H+ H+ +R  +    H   + R+  +  + ++++I +                      +
Sbjct: 367 HWQHLSDRHFTSIEQHAKFQLREVSMTTESNMQRIRQMSYNQ---------------LAR 411

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
           T + I  LH   K    ++   ++ +++     V I             L +GY  +++ 
Sbjct: 412 TTDSIESLHHSTKYNSQKLLSEVAKQVRYYQQVVLIQ-------NPARLLDQGYAFVKNA 464

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498
            + ++    ++     + +   DG+  A+V
Sbjct: 465 EDTYLNSVGSIDKGDFVTVAMSDGRFKAVV 494


>gi|134302172|ref|YP_001122141.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|134049949|gb|ABO47020.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis WY96-3418]
          Length = 461

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|241668735|ref|ZP_04756313.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877266|ref|ZP_05249976.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254843287|gb|EET21701.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 461

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/506 (18%), Positives = 184/506 (36%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    V  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWVVAELSEWR---RSGKHYYGELIEHDGVSKFPIAKIRC 63

Query: 67  IIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W   +  I  +F        +  ++ L    +  +  S    + I  + P+   G   
Sbjct: 64  NCWANKVEHIHSKFSQATGETLKTDMKVLFRVSVN-YHTSFGLSLNIIDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  + L + G+        +P     +AVITS T A   D      ++        
Sbjct: 123 ARKIEILQNLSKNGILEKNKVLNMPDDFTNVAVITSMTAAGKGDFFEEADKLQDLNLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC K ++ A  ++ T+ +     + D+I+L RGGGS  DL  FN+ ++  
Sbjct: 183 DIYEAKMQGAECAKSVSTAFAKIATIAD-----KYDVIVLIRGGGSQADLDWFNNILLAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSEIPVLVGIGHERDSTVLDEICTKRFDTPSKIINYIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               ++   IN   +    +  +      ++++LD L    +  +E  +++  +  +H  
Sbjct: 279 --NTIVDNAINAKYNYESIVRITKSLAKQNKHQLDNLYHNFKTRIEHYLYQMSQSVDH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + ++          L  K    +   +   +K  I 
Sbjct: 335 ------------------------NYKESTSIARGVSKLYDKTVNTMYENILLSSKRLIR 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               +I     +      + +K  + +     + + S + + TLKRG++  +  +  +IT
Sbjct: 371 SYGNNIYNSYNQSTNTARNILKYYNQTSESLYKQILSVSIEPTLKRGFSLTKTIDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++     + + I + DG     V  
Sbjct: 431 TQKQAQAYSDLEIVYADGHIQVEVKE 456


>gi|319776940|ref|YP_004136591.1| exodeoxyribonuclease vii, large subunit [Mycoplasma fermentans M64]
 gi|318038015|gb|ADV34214.1| Exodeoxyribonuclease VII, large subunit [Mycoplasma fermentans M64]
          Length = 458

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 115/502 (22%), Positives = 193/502 (38%), Gaps = 65/502 (12%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
               S+ +L+  +K  +++N      ++  IS     +   HAY ++ D     +A IW 
Sbjct: 13  SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69

Query: 71  GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123
             +  I        +      + +   I+ +  ++     IE +             EK 
Sbjct: 70  SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182
           KK  L +G F    K PIP   + IAVI + +G  +RD+   +  RFP+  + +F   VQ
Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G +   +I   I   N           D+II+ARGGGS  DL  FN E IV AI  S IP
Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIVESKIP 242

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I++AIGH  D + +D  AD    TPTGAA++ VP KE + S L N  AR  N I ++   
Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKM--- 299

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                                                   +         +  +I     
Sbjct: 300 ----------------------------------------LLDSQNKLKKLAQKIYEFKP 319

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              I++    + + ++ I+      L+ +  + KE   ++  ++E    +I       + 
Sbjct: 320 ELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKEFKELVKSIKELFLQKI---QAKFEM 376

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             TR +    H   +   + SI    +        L++G+  + + NN  I   + +   
Sbjct: 377 AKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQIIKTIKQVKVD 436

Query: 483 TRILINFFDGQANAIVINKAPP 504
            ++ I   DG A  +V      
Sbjct: 437 KKLYIELKDGIAEVVVQKVNKK 458


>gi|239918116|ref|YP_002957674.1| Exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC
           2665]
 gi|281415699|ref|ZP_06247441.1| exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC
           2665]
 gi|239839323|gb|ACS31120.1| Exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC
           2665]
          Length = 437

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 15/382 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + +  LS +LK  +E       + G++  ++     G+ Y +++D   
Sbjct: 20  PARAGETSAERPWPLRRLSENLKAHIERA-PATWIEGQLIEFKNNR--GNVYMTMRDLEE 76

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    W+     ++   ++G   +   K   +  + +  + ++ + P G G LL  +
Sbjct: 77  EVSLSLTAWRNVAMTLDGTVQQGSRVVARVKPNFWLKAGRLSMNVQEMRPVGLGDLLARV 136

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  ++ L EEGL S   K P+P +P  I +IT       +D+L+    R+P     I  V
Sbjct: 137 ELLRRALAEEGLTSPARKRPLPLLPHRIGLITGRDSDAKKDVLRNTLLRWPAAEFEIREV 196

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW-HFNDEMIVRAIAN 238
            VQG E P+++A A+ +          P  D+I++ARGGG++E++   F+DE +VRA+A 
Sbjct: 197 AVQGAEAPRQVAAALAE------LDADPAVDVIVIARGGGALEEVVLPFSDETLVRAVAA 250

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  + D  ADLRA TPT AA+  VP      + L +   RL   + R
Sbjct: 251 ARTPVVSAIGHEADRPVLDDVADLRASTPTDAAKRIVPDAAQEAAGLADARLRLAAAVER 310

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++ +   L +L     L      +   +   DR        L   + R+      +  R
Sbjct: 311 RVRAEAEGLATLRSRPVLARPHLMVDARQEETDRWRERGRSALGHRLVREEDALTQLRAR 370

Query: 357 IKSDFLIHNIQKNRQHILEKQQ 378
           +++      + +    +    Q
Sbjct: 371 VRALSPQRTLDRGYAVVQHAGQ 392



 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 1/116 (0%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +  +    +        +   R    L H++     +++     +++ + + TL R
Sbjct: 323 RSRPVLARPHLMVDARQEETDRWRERGRSALGHRLVREEDALTQLRARVRALSPQRTLDR 382

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
           GY  +Q      +     +A   R+ I    G+  A V+        P+ +     
Sbjct: 383 GYAVVQHA-GQVVRDADQVAPDDRLDILVAAGRITADVVATHRTTPTPSHERTRQA 437


>gi|311111872|ref|YP_003983094.1| exodeoxyribonuclease VII large subunit [Rothia dentocariosa ATCC
           17931]
 gi|310943366|gb|ADP39660.1| exodeoxyribonuclease VII large subunit [Rothia dentocariosa ATCC
           17931]
          Length = 452

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 172/371 (46%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + ++ L+ ++K+ ++     + V  +++   G    G+ +  LKD   
Sbjct: 44  PAKSQETTPQNPWPLALLAQNMKNYIDKV-PQLWVEAQVASLNGR--GGNVFIELKDLQE 100

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
                  ++      +    + G   + + K + +  + +  +I   +   G+G L   L
Sbjct: 101 DFSFTLALFGQAGRGLGSDVKVGARVVTLAKPSLW-KNGRLSLIGRRIYAVGTGNLHEQL 159

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           +  ++KL  EGLF+D  K P+P +P  + +IT       +D+++  S R+P ++  +  V
Sbjct: 160 QILREKLAAEGLFADARKKPLPLLPHRVGLITGRDSDAEKDVIRNASLRWPGVQFEVRNV 219

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+        A   +  L E    P  D+I++ARGGGS EDL  F+DE +VRA+A +
Sbjct: 220 KVQGEGS------ASEVMAALSELDAHPEVDVIVIARGGGSFEDLLSFSDEALVRAVAAA 273

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  + D  AD+RA TPT A +  VP      + +    AR +  ++  
Sbjct: 274 QTPVVSAIGHEADSPILDAVADVRASTPTDAGKRIVPDVAEELAVIREARARADRAVLGY 333

Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           + Y+            L   +  L      + RL      ++E  + R+    +H I R+
Sbjct: 334 LNYQEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARV 393

Query: 358 KSDFLIHNIQK 368
           ++   +  +++
Sbjct: 394 RALSPVETLKR 404



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 45/109 (41%)

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            E+  +      +  Q +  + +    I +L  R    + +++     ++S T   +++ 
Sbjct: 337 QEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARVRAL 396

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +   TLKRGYT +Q  + + +     L+   ++ +    G A   V+  
Sbjct: 397 SPVETLKRGYTIVQRADGDLVRDATALSAHDKLTMRAAVGGAEVSVVKT 445


>gi|212696079|ref|ZP_03304207.1| hypothetical protein ANHYDRO_00615 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676708|gb|EEB36315.1| hypothetical protein ANHYDRO_00615 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 393

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 15/371 (4%)

Query: 15  YSVSELSYHLKH--IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV + + ++K    ++    +V ++GEI+ Y+  H+  H YFSLK++   ID  I+   
Sbjct: 4   LSVKQFNQYIKTSLKLDPLFQNVSIKGEIANYKISHN--HIYFSLKEDEEIIDCAIYYYE 61

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +      G E +V G +      SK  I + ++   G         K K+   ++G 
Sbjct: 62  DKDLGVY-NNGDEVIVEGNLIYNSFFSKISIAVNNIESKGLSEDYIKFLKLKEDFYKKGY 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  + K  I   PK I +ITS   A I D +  I+     + + ++PVKVQG     EI 
Sbjct: 121 FDQERKKSISSYPKNIGLITSDKSAAIVDFISVINKEISDINIYLYPVKVQGLSAKSEII 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           NAI  L+         + D I++ RGGGS EDL  FN++ +V  I  +  PIISAIGH+ 
Sbjct: 181 NAIDILDE-------KKLDAIVITRGGGSKEDLKVFNEKDLVEKIYKAKSPIISAIGHKI 233

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNS 309
           D +L D  +D+   TPT A    V   + ++  + +L   +   + R I  K        
Sbjct: 234 DLSLTDLVSDVSLQTPTEAGSYLVRNYKKIRDKINDLFINIRKTLNRNIDLKELKLRNLG 293

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               L   +  L      LD L  +    +E  I +K    + +  R+ S   I  I+K 
Sbjct: 294 DKLELYKIENLLEKKSNDLDLLFDKFNKTIENDIRQKENKISLLKYRLNSINSILEIKKK 353

Query: 370 RQHILEKQQHI 380
             +I + +  +
Sbjct: 354 SIYIKDLEDKL 364



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L+ N +K R  I +   +I + + +++    L+ +     L + +   +N +      + 
Sbjct: 256 LVRNYKKIRDKINDLFINIRKTLNRNIDLKELKLRNLGDKLELYK--IENLLEKKSNDLD 313

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYTS-IQDTNNNFITQKRNL 479
            L  +    + + I+     +S+    L S  +     K+  +  I+D  +  I  + +L
Sbjct: 314 LLFDKFNKTIENDIRQKENKISLLKYRLNSINSILEIKKK--SIYIKDLEDKLIYSRNSL 371

Query: 480 ATKTRILINFFDGQANAIV 498
             K ++ I F DG+  A +
Sbjct: 372 KNKDKVKIVFSDGEVKAEI 390


>gi|212690703|ref|ZP_03298831.1| hypothetical protein BACDOR_00190 [Bacteroides dorei DSM 17855]
 gi|237725106|ref|ZP_04555587.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D4]
 gi|212666803|gb|EEB27375.1| hypothetical protein BACDOR_00190 [Bacteroides dorei DSM 17855]
 gi|229436372|gb|EEO46449.1| exodeoxyribonuclease VII large subunit [Bacteroides dorei
           5_1_36/D4]
          Length = 435

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 91/433 (21%), Positives = 180/433 (41%), Gaps = 31/433 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++    S+ EL+  +K  + + L     V+ E+S  R  + SGH Y  F  K+       
Sbjct: 1   MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++    IW      ++   EE        GI+ +V   +        Y + ++ + P+  
Sbjct: 60  AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVTVEFHELYG-YSLTVQDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G +     +  K+L EEG+ +   +  IP + + IAVI+S T A   D   ++      
Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG+   + +  A+  ++  ++       D++++ RGGG+  DL  F+ 
Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +    A   IPII+ IGHE D T+ D  +  R  TPT AAE  +         L +  
Sbjct: 234 YELATNCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + + + I   ++ +   LN +++ +P      L    YR +R+ + LE  L+  + ++  
Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLR 406
               +  ++        + K +  +   +Q ++    ++   R   +  K   A++    
Sbjct: 354 CLKMVETQLGIVS-QRRLVKEKHRLQLLEQELKAASPENLLKRGYSITLKNGKAVIDASA 412

Query: 407 EQTKNRIFYLHTH 419
            Q  + +      
Sbjct: 413 LQPGDELTTRFAK 425


>gi|308189747|ref|YP_003922678.1| exodeoxyribonuclease VII [Mycoplasma fermentans JER]
 gi|307624489|gb|ADN68794.1| exodeoxyribonuclease VII [Mycoplasma fermentans JER]
          Length = 458

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 116/502 (23%), Positives = 193/502 (38%), Gaps = 65/502 (12%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
               S+ +L+  +K  +++N      ++  IS     +   HAY ++ D     +A IW 
Sbjct: 13  SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69

Query: 71  GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123
             +  I        +      + +   I+ +  ++     IE +             EK 
Sbjct: 70  SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182
           KK  L +G F    K PIP   + IAVI + +G  +RD+   +  RFP+  + +F   VQ
Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G +   +I   I   N           D+II+ARGGGS  DL  FN E IV AIA S IP
Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIAESKIP 242

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I++AIGH  D + +D  AD    TPTGAA++ VP KE + S L N  AR  N I ++   
Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKM--- 299

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                                                   +         +  +I     
Sbjct: 300 ----------------------------------------LLDSQNKLKKLAQKIYEFKP 319

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              I++    + + ++ I+      L+ +  + KE   ++   +E    +I       + 
Sbjct: 320 ELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKEFKELVKSSKELFLQKI---QAKFEM 376

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             TR +    H   +   + SI    +        L++G+  + + NN  I   + +   
Sbjct: 377 TKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQIIKTIKQVKVD 436

Query: 483 TRILINFFDGQANAIVINKAPP 504
            ++ I   DG A  +V      
Sbjct: 437 KKLYIELKDGIAEVVVQKVNKK 458


>gi|237709742|ref|ZP_04540223.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 9_1_42FAA]
 gi|265754372|ref|ZP_06089561.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_33FAA]
 gi|229456378|gb|EEO62099.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 9_1_42FAA]
 gi|263235081|gb|EEZ20636.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_33FAA]
          Length = 435

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 91/433 (21%), Positives = 180/433 (41%), Gaps = 31/433 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++    S+ EL+  +K  + + L     V+ E+S  R  + SGH Y  F  K+       
Sbjct: 1   MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++    IW      ++   EE        GI+ +V   +        Y + ++ + P+  
Sbjct: 60  AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVTVEFHELYG-YSLTVQDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G +     +  K+L EEG+ +   +  IP + + IAVI+S T A   D   ++      
Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG+   + +  A+  ++  ++       D++++ RGGG+  DL  F+ 
Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +    A   IPII+ IGHE D T+ D  +  R  TPT AAE  +         L +  
Sbjct: 234 YELAANCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + + + I   ++ +   LN +++ +P      L    YR +R+ + LE  L+  + ++  
Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLR 406
               +  ++        + K +  +   +Q ++    ++   R   +  K   A++    
Sbjct: 354 CLKMVETQLGIVS-QRRLVKEKHRLQLLEQELKAASPENLLKRGYSITLKNGKAVIDASA 412

Query: 407 EQTKNRIFYLHTH 419
            Q  + +      
Sbjct: 413 LQPGDELTTRFAK 425



 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 55/145 (37%), Gaps = 2/145 (1%)

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYL 416
            +  ++H I    +    +   + + +    R    E+  +   +    E   ++R+   
Sbjct: 292 YASAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKE 351

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              +K + T++  +   ++      + +  + L++ + +N LKRGY+     N   +   
Sbjct: 352 THCLKMVETQLGIVSQRRLVKEKHRLQLLEQELKAASPENLLKRGYSITL-KNGKAVIDA 410

Query: 477 RNLATKTRILINFFDGQANAIVINK 501
             L     +   F  G+  +IV  K
Sbjct: 411 SALQPGDELTTRFAKGEIKSIVTKK 435


>gi|307699941|ref|ZP_07636992.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris
           FB024-16]
 gi|307614979|gb|EFN94197.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris
           FB024-16]
          Length = 428

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P + + + D+P + ++ L   +   ++  ++   V  ++  Y     +  ++F  KD  +
Sbjct: 17  PRALQTTRDNP-WPLALLLEKMDEYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 74

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    +   +       + G   ++  K   +  +    ++   + P+G G +L  L
Sbjct: 75  DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 134

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K++L  EGLFS +HK  +PF+P+ + +I         D+ + +  R+PL    +  V
Sbjct: 135 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 194

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+ CP+E+A AI       E  T    D+I++ RGGG+ EDL  F+DE +VRA   +
Sbjct: 195 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 248

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SA+GHE D  L D+ AD RA TPT AA+  VP        +     ++   +   
Sbjct: 249 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 308

Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +    +          + N    L   R  +      +   +  I+    +        +
Sbjct: 309 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 368

Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380
            +      +++    +    + +
Sbjct: 369 TAISPRATLERGYAVLRTPGRAL 391



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +Q + Q V   +       +   +    + +     +      I   +  +   ++  + 
Sbjct: 298 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 355

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
                ++     L + + + TL+RGY  ++      IT    +     +      G   A
Sbjct: 356 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRALITDATTVKKGDLLEAVLARGSLVA 415

Query: 497 IVINKAPPKEQP 508
            V+   P     
Sbjct: 416 SVVGANPGAGTA 427


>gi|300741968|ref|ZP_07071989.1| exodeoxyribonuclease VII, large subunit [Rothia dentocariosa M567]
 gi|300381153|gb|EFJ77715.1| exodeoxyribonuclease VII, large subunit [Rothia dentocariosa M567]
          Length = 436

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 176/371 (47%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + ++ L+ ++K+ ++     + V  +++   G    G+ +  LKD   
Sbjct: 28  PAKSQETTPQNPWPLALLAQNMKNYIDKV-PQLWVEAQVASLNGR--GGNVFIELKDLQE 84

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
                  ++      +    + G   + + K + +  + +  +I   +   G+G L   L
Sbjct: 85  DFSFTLALFGQAGRGLGSDVKVGARVVTLAKPSLW-KNGRLSLIGRRIYAVGTGNLHEQL 143

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           +  ++KL  EGLF+D  K P+P +P  + +IT       +D+++  S R+P ++  +  V
Sbjct: 144 QILREKLAAEGLFADARKKPLPLLPHRVGLITGRDSDAEKDVIRNASLRWPGVQFEVRNV 203

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           KVQG+    E+  A+ +L+ L      P  D+I++ARGGGS EDL  F+DE +VRA+A +
Sbjct: 204 KVQGEGSASEVMAALSELDAL------PEVDVIVIARGGGSFEDLLSFSDEALVRAVAAA 257

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  + D  AD+RA TPT A +  VP      + +    AR +  ++  
Sbjct: 258 QTPVVSAIGHEADSPILDAVADVRASTPTDAGKRIVPDVAEELAVIREARARADRAVLGY 317

Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           + Y+            L   +  L      + RL      ++E  + R+    +H I R+
Sbjct: 318 LNYQEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARV 377

Query: 358 KSDFLIHNIQK 368
           ++   +  +++
Sbjct: 378 RALSPVETLKR 388



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 45/109 (41%)

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            E+  +      +  Q +  + +    I +L  R    + +++     ++S T   +++ 
Sbjct: 321 QEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARVRAL 380

Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +   TLKRGYT +Q  + + +     L+   ++ +    G A   V+  
Sbjct: 381 SPVETLKRGYTIVQRADGDLVRDATTLSAHDKLTMRAAVGGAEVSVVKT 429


>gi|327403514|ref|YP_004344352.1| Exonuclease VII large subunit [Fluviicola taffensis DSM 16823]
 gi|327319022|gb|AEA43514.1| Exonuclease VII, large subunit [Fluviicola taffensis DSM 16823]
          Length = 476

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 86/509 (16%), Positives = 189/509 (37%), Gaps = 52/509 (10%)

Query: 10  LDHPEY-SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH---S 62
           +  PEY ++ +++  ++ ++    S    V  E+         GH Y  L  K++     
Sbjct: 1   MQTPEYFTLKQVADSIRKVIAERYSRTYWVIAEMHKLNST-KKGHCYPELVQKEDGLIVV 59

Query: 63  RIDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIP-SGS 113
            +   IWK    +I+            +G+E L   KIT +       + I  + P    
Sbjct: 60  EMRGTIWKQNFERIQQKFYEIVKEPLRDGMELLFQVKIT-YHPIYNIGLEIIDIDPNYAL 118

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRF 170
           G L    ++  ++L +EG+ +   +  +  +PK +A+I+        D +  ++    R+
Sbjct: 119 GALQRERQETLERLNKEGILNANQQIEMALVPKRLAIISQADSKGYSDFVTLLNGHPKRY 178

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
                +F   +QGD     I   + ++  +K        D +++ RGGG    +  +N+ 
Sbjct: 179 HFNTFLFEAALQGDNAIASIKGQLKRIEEIKHH-----FDAVVIIRGGGGEVGMHCYNNY 233

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            + +AIA   +P+++ IGH T+ T+ +  A     TP+  A   + + E L + L     
Sbjct: 234 ELAKAIATFPLPVLTGIGHSTNLTVCEMIAFRNGITPSDMAYFLLSIFEELDAPLDEA-- 291

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                              L+K        L  S+ +  +L    +  ++ ++  +   F
Sbjct: 292 -------------------LMKLPKQIQHLLQESKNQFGQLTLTFKQEVQAVLLSEKNAF 332

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
           + I+   +     H +  + Q + + +  I             +++  I +L +    +K
Sbjct: 333 HGIVKDFEFQV-KHKMTYSNQVLTQLRNQIRSSSGYFFESQKNKRENLINLLQI---HSK 388

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
           + +      I     ++      + ++   ++      L        L+RGY  + +   
Sbjct: 389 SILNSSLQTINNQQNQLIRFFPRRFETETKNLEQAELHLNLLDPITILQRGYAIVTNQKG 448

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVI 499
             ++ K        + I     + NA V 
Sbjct: 449 -VLSAKNQAKAGEELKIVTEAQELNAKVK 476


>gi|330722417|gb|EGH00261.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC2047]
          Length = 185

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 1/170 (0%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63
                S      +V++L+   + ++ES    V V GEIS       SGH YF+LKD+ ++
Sbjct: 1   MPSTASSQREILTVTDLNRRARSLLESQFRQVWVEGEISNL-MKAGSGHWYFTLKDDKAQ 59

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +   ++      +    + G+  ++  K + + G   YQ+I E++I +G G L    E+ 
Sbjct: 60  VRCAMFANRNRSLRINVKNGLHAIIRAKASIYEGRGDYQLIAENMIDAGEGRLQRQFEEL 119

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR 173
           K KL  EGLF + HK P+P +P  I ++TSP+GA IRDIL  +    P  
Sbjct: 120 KLKLSREGLFDEAHKRPLPALPTHIGIVTSPSGAAIRDILTVLQPSLPQH 169


>gi|71065848|ref|YP_264575.1| exodeoxyribonuclease VII large subunit [Psychrobacter arcticus
           273-4]
 gi|71038833|gb|AAZ19141.1| Exodeoxyribonuclease VII large subunit [Psychrobacter arcticus
           273-4]
          Length = 516

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 95/510 (18%), Positives = 173/510 (33%), Gaps = 68/510 (13%)

Query: 17  VSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----SRIDAIIW 69
           +S+    +  +++   +H V V+ EI         GH YF L  KD+     +     +W
Sbjct: 46  LSDYLSAVDMVIKQTFNHRVWVKAEIRNLSSK--GGHYYFELAEKDDDGKVIASCRGNLW 103

Query: 70  KGTLNKI--EFLPEEGI----EFLVIGKITT-FPGSSKYQIIIESLIPS-GSGTLLTALE 121
           +    ++  +F    G+    +  V+ K++  F     + + IE + PS   G L     
Sbjct: 104 RFKAVRVLAKFERATGMPLDRDLTVLLKVSAGFHAQYGFSLTIEDIDPSYTLGDLARQYA 163

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFP 178
           +   +L  EGL     + P PF  + + VI     A + D     +              
Sbjct: 164 EMVDRLAGEGLLHLNQQLPTPFDIEHVLVIAPEKAAGLGDFQADANRLASTGACHFHYHN 223

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
              QG+  P EI  AI+      +      PD++++ RGGG++ DL + ND  +   +A 
Sbjct: 224 ATFQGNHAPAEIRQAIISAQQQFQDIYQRLPDLLVIIRGGGAVGDLAYLNDYELAALVAE 283

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             IP+   IGHE D  + D  A     TP+                     A L  ++ +
Sbjct: 284 QPIPVWVGIGHERDKVILDEVAHTSFDTPSKVIAAIS--------------AHLAQLVAQ 329

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            ++Y++    +  + L  + Q  S    ++          L+      +R      NR  
Sbjct: 330 TLQYQMQIKQAAQRQLNTAMQQTSRQLSQIQSQTIGQLTALQKDSAYAWRSIQQSANRQV 389

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                   + + Q      Q +         +                            
Sbjct: 390 KQAARQASELHTQTQSSVYQQLSLASTYSKSHQKTM------------------------ 425

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKR 477
                   ++      I++   S      I+        LK+GY+ + D  +   +T   
Sbjct: 426 --------MQSAQQQLIQAQRNS-EHLRDIVLLHRPSRVLKQGYSILTDEKDKRILTSSN 476

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQ 507
            L  +  I I   DG+A A +I+    K+ 
Sbjct: 477 QLYPEQTIHIALKDGKAKAQIIDIKMNKKP 506


>gi|227876637|ref|ZP_03994747.1| exodeoxyribonuclease VII [Mobiluncus mulieris ATCC 35243]
 gi|227842838|gb|EEJ53037.1| exodeoxyribonuclease VII [Mobiluncus mulieris ATCC 35243]
          Length = 422

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P + + + D+P + ++ L   +   ++  ++   V  ++  Y     +  ++F  KD  +
Sbjct: 11  PRALQTTRDNP-WPLALLLEKMDDYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 68

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    +   +       + G   ++  K   +  +    ++   + P+G G +L  L
Sbjct: 69  DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 128

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K++L  EGLFS +HK  +PF+P+ + +I         D+ + +  R+PL    +  V
Sbjct: 129 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 188

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+ CP+E+A AI       E  T    D+I++ RGGG+ EDL  F+DE +VRA   +
Sbjct: 189 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 242

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SA+GHE D  L D+ AD RA TPT AA+  VP        +     ++   +   
Sbjct: 243 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 302

Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +    +          + N    L   R  +      +   +  I+    +        +
Sbjct: 303 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 362

Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380
            +      +++    +    + +
Sbjct: 363 TAISPRATLERGYAVLRTPGRTL 385



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +Q + Q V   +       +   +    + +     +      I   +  +   ++  + 
Sbjct: 292 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 349

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
                ++     L + + + TL+RGY  ++      IT    +     +      G   A
Sbjct: 350 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRTLITDATTVKKGDLLEAVLARGSLVA 409

Query: 497 IVINKAPPKEQP 508
            V+   P     
Sbjct: 410 SVVGANPGAGTA 421


>gi|269976169|ref|ZP_06183165.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris 28-1]
 gi|306817588|ref|ZP_07451331.1| exodeoxyribonuclease VII large subunit [Mobiluncus mulieris ATCC
           35239]
 gi|269935498|gb|EEZ92036.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris 28-1]
 gi|304649630|gb|EFM46912.1| exodeoxyribonuclease VII large subunit [Mobiluncus mulieris ATCC
           35239]
          Length = 422

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62
           P + + + D+P + ++ L   +   ++  ++   V  ++  Y     +  ++F  KD  +
Sbjct: 11  PRALQTTRDNP-WPLALLLEKMDEYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 68

Query: 63  --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    +   +       + G   ++  K   +  +    ++   + P+G G +L  L
Sbjct: 69  DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 128

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+ K++L  EGLFS +HK  +PF+P+ + +I         D+ + +  R+PL    +  V
Sbjct: 129 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 188

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG+ CP+E+A AI       E  T    D+I++ RGGG+ EDL  F+DE +VRA   +
Sbjct: 189 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 242

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             PI+SA+GHE D  L D+ AD RA TPT AA+  VP        +     ++   +   
Sbjct: 243 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 302

Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +    +          + N    L   R  +      +   +  I+    +        +
Sbjct: 303 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 362

Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380
            +      +++    +    + +
Sbjct: 363 TAISPRATLERGYAVLRTPGRAL 385



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%)

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +Q + Q V   +       +   +    + +     +      I   +  +   ++  + 
Sbjct: 292 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 349

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
                ++     L + + + TL+RGY  ++      IT    +     +      G   A
Sbjct: 350 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRALITDATTVKKGDLLEAVLARGSLVA 409

Query: 497 IVINKAPPKEQP 508
            V+   P     
Sbjct: 410 SVVGANPGAGTA 421


>gi|27228653|ref|NP_758703.1| putative exodeoxyribonuclease VII (large subunit) [Pseudomonas
           resinovorans]
 gi|219857077|ref|YP_002474109.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp.
           CA10]
 gi|26106241|dbj|BAC41681.1| putative exodeoxyribonuclease VII (large subunit) [Pseudomonas
           resinovorans]
 gi|219689005|dbj|BAH10096.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas
           putida]
          Length = 492

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 79/516 (15%), Positives = 168/516 (32%), Gaps = 71/516 (13%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKD 59
           ++P +  + ++    ++S     ++  V + +     V  E+S ++    +GH Y  + +
Sbjct: 26  VSPVNAPDPVEQH-LTLSAYLTQIQKAVRAAVPDSSWVIAELSDFKRRP-NGHCYMDILE 83

Query: 60  NH-----SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
           +      ++    ++     K+          LP+ G+  L+  +   F     + +++ 
Sbjct: 84  SREGAEVAKARCTMFANVAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVT 142

Query: 107 SLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
            + PS   G +   ++K    L E   F  Q   P P     +AV+     A + D  + 
Sbjct: 143 GIDPSYTLGDMQAKMQKIIVSLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRD 202

Query: 166 ISCRFPLRV---IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222
                   V     F    QG +    I +A+  ++   + +     D + + RGGG+  
Sbjct: 203 AEQLAAAEVCGFEYFSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKS 259

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           DL   ND  +   +    +P+ + IGHE D  + D  A  R  TP+              
Sbjct: 260 DLAWLNDANLAAWVCRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEA 319

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
           S+      R N +I+RL+  +           P+ D+  S    R+       +  L   
Sbjct: 320 STARAQVERANGMILRLVSGQA----------PHLDRAWSTFSRRVTETLHREQRQLLQQ 369

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
                +  + +            + + R  +   Q    ++                   
Sbjct: 370 QSSLDKGRDRL------------LSQQRMALQLAQDRFSRLGAGLC-------------- 403

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
                                 +R+  +    I    + + + + +         L RG+
Sbjct: 404 -----------VAERQRGLFAASRVASLSMALIAKETSRLELASTVFDKTNPLALLGRGF 452

Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
             ++      I+         ++ + F DG   A V
Sbjct: 453 ALVRGPGGVIISSAEQARDAGKLDLAFADGHVTADV 488


>gi|62261146|gb|AAX77963.1| unknown protein [synthetic construct]
          Length = 496

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 33  LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 89

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 90  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 148

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
                  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 149 ARKIGILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 208

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 209 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 263

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 264 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 304

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 305 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 360

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 361 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 396

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 397 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 456

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 457 SQKQAQKYLNLEIIYADGQVQVEVKN 482


>gi|56708255|ref|YP_170151.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110670726|ref|YP_667283.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis FSC198]
 gi|224457375|ref|ZP_03665848.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370741|ref|ZP_04986746.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254875076|ref|ZP_05247786.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|56604747|emb|CAG45823.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321059|emb|CAL09206.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151568984|gb|EDN34638.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254841075|gb|EET19511.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|282159483|gb|ADA78874.1| exodeoxyribonuclease VII large subunit [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 461

 Score =  189 bits (480), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 96/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    +  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63

Query: 67  IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W    + I  +F    G      ++ L+   ++ +  S    + I  + P+   G   
Sbjct: 64  NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
                  +KL ++G+        +P+    IAVITS T A   D      ++        
Sbjct: 123 ARKIGILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC + ++ A  ++            D I++ RGGGS  DL  FN+     
Sbjct: 183 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               +I    N   +    L  ++ ++  ++++LD L    +  +E  +++  ++  H  
Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + +  +      + L  K        +   ++N I 
Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               ++++       I  + IK  + +     + + S + + TL+RG++  +  +  +IT
Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++       + I + DGQ    V N
Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456


>gi|325846568|ref|ZP_08169483.1| exodeoxyribonuclease VII, large subunit [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481326|gb|EGC84367.1| exodeoxyribonuclease VII, large subunit [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 393

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 165/371 (44%), Gaps = 15/371 (4%)

Query: 15  YSVSELSYHLKH--IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV + + ++K    ++    +V ++GEI+ Y+  H+  H YFSLK++   ID  I+   
Sbjct: 4   LSVKQFNQYIKTSLKLDPLFQNVSIKGEIANYKISHN--HIYFSLKEDEEVIDCAIYYYE 61

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              +      G E +V G +      SK  I + ++   G         K K+   ++G 
Sbjct: 62  DKDLG-DFNNGDEVIVEGNLIYNSFFSKISIAVNNIEKKGLSEDYIKFLKLKEDFYKKGY 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F  + K  I   PK I +ITS   A I D +  I+     + + ++PVKVQG     EI 
Sbjct: 121 FDHERKKSISSYPKNIGLITSDKSAAIVDFISVINKEISDINIYLYPVKVQGLSAKSEII 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
           NAI  L+         + D I++ RGGGS EDL  FN++ +V  I  +  PIISAIGH+ 
Sbjct: 181 NAIDILDE-------KKLDAIVITRGGGSKEDLKVFNEKDLVEKIYKAKSPIISAIGHKI 233

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNS 309
           D +L D  +D+   TPT A    V   + ++  + +L   +   + R I  K        
Sbjct: 234 DLSLTDLVSDVSLQTPTEAGSYLVRNYKKIRDKINDLFINIKKTLNRNIDLKELKLRNLG 293

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               L   +  L      LD L  +    +E  I +K    + +  R+ S   I  I+K 
Sbjct: 294 DKLELYKIENLLEKKSNDLDLLFDKFNKTIENDIRQKENKISILKYRLNSINSILEIKKK 353

Query: 370 RQHILEKQQHI 380
             +I +    +
Sbjct: 354 SIYIKDLDDKL 364



 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L+ N +K R  I +   +I++ + +++    L+ +     L + +   +N +      + 
Sbjct: 256 LVRNYKKIRDKINDLFINIKKTLNRNIDLKELKLRNLGDKLELYK--IENLLEKKSNDLD 313

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYTS-IQDTNNNFITQKRNL 479
            L  +    + + I+     +SI    L S  +     K+  +  I+D ++  I  + +L
Sbjct: 314 LLFDKFNKTIENDIRQKENKISILKYRLNSINSILEIKKK--SIYIKDLDDKLIYSRNSL 371

Query: 480 ATKTRILINFFDGQANAIV 498
             K ++ I F DG+  A +
Sbjct: 372 KNKDKVKIVFSDGEVKAEI 390


>gi|329957307|ref|ZP_08297827.1| Exonuclease VII, large subunit [Bacteroides clarus YIT 12056]
 gi|328523020|gb|EGF50123.1| Exonuclease VII, large subunit [Bacteroides clarus YIT 12056]
          Length = 416

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 166/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ +L+  ++  +E  L     ++ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 4   LSLYDLNALVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 63  TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174
              ++  K+L EEG+ +   +  IP +P+ IAVI+SPT A   D   ++           
Sbjct: 122 RRRKEILKQLEEEGVLTLNKELKIPRLPQRIAVISSPTAAGYGDFCHQLQNNPGGFYFHT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+   + +  A+ ++N+  +       D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGERVEESVLAALDKINSRLDN-----FDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE  +         L  L ARL +
Sbjct: 237 ACAQFPLPIITGIGHERDDTVIDSVAHTRVKTPTAAAEFLIDCMNDAADELDLLAARLYD 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L+  +   L S    +P++    +S  +  L  + +++   +   +FR++     +
Sbjct: 297 GARNLLMQEHQRLVSCKNRIPSAAYSCISDVKLTLLTVRKDIVQAVTSSLFRQHHRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 QQRLMDASPEKQLAR 371



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 45/125 (36%), Gaps = 1/125 (0%)

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           ++       +  E +  ++  + +     + I  +   +  +   I   ++  +   H  
Sbjct: 293 RLYDGARNLLMQEHQRLVSCKNRIPSAAYSCISDVKLTLLTVRKDIVQAVTSSLFRQHHR 352

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           + +  + L   + +  L RGY+     N   +     L     I+   + G+  ++V NK
Sbjct: 353 LELLQQRLMDASPEKQLARGYSITL-KNGKAVKNTSLLNEGDEIITRLYHGEVISVVTNK 411

Query: 502 APPKE 506
           +   +
Sbjct: 412 SSKNK 416


>gi|72383296|ref|YP_292651.1| exodeoxyribonuclease VII large subunit [Prochlorococcus marinus
           str. NATL2A]
 gi|72003146|gb|AAZ58948.1| Exodeoxyribonuclease VII large subunit [Prochlorococcus marinus
           str. NATL2A]
          Length = 386

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 11/315 (3%)

Query: 15  YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
           YSV EL+  +  ++         +   +S  +     GH + +L D  + +DA+ W  T+
Sbjct: 14  YSVKELNESIGLLLSRGFAPKFILEAAVS--KSQIKKGHLWLTLTDGKASVDAVAWSSTI 71

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
             ++FLP++    ++IGK+  +   ++  + +  + PS   T+L   E  K  L +EGL 
Sbjct: 72  KSLKFLPKQDDGVVIIGKLNFWESQARVSVQVFDIRPS-ISTVLRKFEIVKSNLFKEGLI 130

Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192
            D  +  +P  P  + ++TS   + + D+L+    R+PL ++ I P+ VQGD   K    
Sbjct: 131 DDSLRKKLPKYPHSLGILTSVPSSALADMLRTAKERWPLTKLQIIPIPVQGDNANK---- 186

Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252
             L+    K  +   + + +I+ARGGGS EDL  F+ E+I R IA   IP+I+ IGHE D
Sbjct: 187 --LKSILSKLKKNKLQVEALIIARGGGSREDLMLFDSEIIAREIATFPIPVITGIGHEDD 244

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+AD  +D R+ TPT A    +P +E  ++  +  +  L   +    +    TL +   
Sbjct: 245 LTVADLVSDHRSATPTAAIVDLLPSREIEKNKFLQNKKLLKYYLKLFFQNTKKTLITKKS 304

Query: 313 ALPNSDQTLSCSRYR 327
              +    L     R
Sbjct: 305 IFQSYSPRLLIKNKR 319



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           +    +         KK     L +  + TK  +    +  +    R+       IK+  
Sbjct: 266 LLPSREIEKNKFLQNKKLLKYYLKLFFQNTKKTLITKKSIFQSYSPRL------LIKNKR 319

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           T ++    IL + + +  LKRG+  I D + N I   +N+    ++++ F DG+  A V 
Sbjct: 320 TRINYMYEILNALSPRKLLKRGFALITDESGNSIYSVKNIKENDKLIVQFCDGKITAEVD 379

Query: 500 N 500
           +
Sbjct: 380 S 380


>gi|239621684|ref|ZP_04664715.1| exodeoxyribonuclease 7 large subunit [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515559|gb|EEQ55426.1| exodeoxyribonuclease 7 large subunit [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 390

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 100/357 (28%), Positives = 163/357 (45%), Gaps = 19/357 (5%)

Query: 20  LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII----WKGTLNK 75
           LS      VE       V G+I+      + G AY +L+D+   I   +    + G    
Sbjct: 2   LSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFEDI--AMEVNGF-GRFAA 56

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTALEKRKKKLLEEGLFS 134
                 +G   ++ GK   +   +   +  ++++  G+G +L   +++ +K+L  EGLF 
Sbjct: 57  AASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKQLKGEGLFD 116

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
             HK P+P  PK I +I +P      D++  ++ R+P +   +  V VQG++CP E+  A
Sbjct: 117 ADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPAEVVQA 176

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I QL+        P  D+II+ARGGGS EDL  F+DE +VRA    + P+IS+IGHE DW
Sbjct: 177 IAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAAYACTTPLISSIGHEDDW 230

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL D  ADLRA TPT AA+  VP        +     R+   +   ++ +I  +      
Sbjct: 231 TLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRVRSRVENEIRLIEGYANR 290

Query: 314 --LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L      L   +  +D   + L+  L  I+             + +      + +
Sbjct: 291 PSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAHASLTALSPQSTLNR 347



 Score = 93.7 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%)

Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262
           R D I+    GGS++ +          E +  A     +P             A    D+
Sbjct: 85  RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 144

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +   V            A +   I +L       +  + +   + +  + 
Sbjct: 145 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 203

Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
            S  R+ R        L   I          ++  +++       ++    + E Q  + 
Sbjct: 204 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 262

Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +     +R     + E    L           Q    +      I   + R++  L   +
Sbjct: 263 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 322

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494
                +V      L + + ++TL RGY  +Q  + + +     ++    I +    G  
Sbjct: 323 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 381


>gi|150002869|ref|YP_001297613.1| exodeoxyribonuclease VII large subunit [Bacteroides vulgatus ATCC
           8482]
 gi|254884431|ref|ZP_05257141.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 4_3_47FAA]
 gi|294778148|ref|ZP_06743579.1| exodeoxyribonuclease VII, large subunit [Bacteroides vulgatus
           PC510]
 gi|319642441|ref|ZP_07997092.1| exodeoxyribonuclease VII [Bacteroides sp. 3_1_40A]
 gi|149931293|gb|ABR37991.1| putative exodeoxyribonuclease VII large subunit [Bacteroides
           vulgatus ATCC 8482]
 gi|254837224|gb|EET17533.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 4_3_47FAA]
 gi|294448007|gb|EFG16576.1| exodeoxyribonuclease VII, large subunit [Bacteroides vulgatus
           PC510]
 gi|317385897|gb|EFV66825.1| exodeoxyribonuclease VII [Bacteroides sp. 3_1_40A]
          Length = 435

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 88/399 (22%), Positives = 171/399 (42%), Gaps = 29/399 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++    S+ EL+  +K  + + L     V+ E+S  R  + SGH Y  F  K+       
Sbjct: 1   MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++    IW      ++   EE        GI+ +V   +        Y + ++ + P+  
Sbjct: 60  AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVAVEFHELYG-YSLTVQDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G +     +  K+L EEG+ +   +  IP + + IAVI+S T A   D   ++      
Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG+   + +  A+  ++  ++       D++++ RGGG+  DL  F+ 
Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +    A   IPII+ IGHE D T+ D  +  R  TPT AAE  +         L +  
Sbjct: 234 YELAANCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + + + I   ++ +   LN +++ +P      L    YR +R+ + LE  L+  + ++  
Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
               +  R+        + K +  +   +Q ++    ++
Sbjct: 354 CLKMMETRLGIVS-QRRLVKEKHRLQLLEQELKAASPEN 391



 Score = 99.1 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 2/145 (1%)

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYL 416
            +  ++H I    +    +   + + +    R    E+  +   +    E   ++R+   
Sbjct: 292 YASAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKE 351

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              +K + TR+  +   ++      + +  + L++ + +N LKRGY+     N   +   
Sbjct: 352 THCLKMMETRLGIVSQRRLVKEKHRLQLLEQELKAASPENLLKRGYSITL-KNGKAVIDA 410

Query: 477 RNLATKTRILINFFDGQANAIVINK 501
             L     +   F  G+  +IV  K
Sbjct: 411 SVLQPGDELTTRFAKGEIKSIVTKK 435


>gi|313837023|gb|EFS74737.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL037PA2]
 gi|314929389|gb|EFS93220.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL044PA1]
 gi|314971527|gb|EFT15625.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL037PA3]
          Length = 415

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 17/380 (4%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG-HAYFSLKDNHS 62
            ++ N++D+P   ++ +   +K  VE   S + V+ ++        SG   + +L+D   
Sbjct: 1   MAEPNTVDNPR-PLAWVVNAVKGWVERC-SAIWVQAQVIEVTRR--SGPTQFLTLRDPAE 56

Query: 63  RIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
            I A     +  L+      E G+    + K T +  + +    +  + P+G G LL  L
Sbjct: 57  EISASATCHRRVLDAAG-PIESGMTVTALIKPTVWSRTGRLSFEVSEITPTGEGQLLAQL 115

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179
           E+RK+ L  EGLF       IP +P+ I +IT       RD+ +  + R+P  R ++   
Sbjct: 116 ERRKRLLEAEGLFDATLHKTIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVRNT 175

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQG    +        +  L +    P  D+I++ARGGGS+EDL  F+DE +VRA+  +
Sbjct: 176 LVQGPTAAQ------QIIAALADLDADPTVDVIVIARGGGSLEDLLPFSDEALVRAVYAT 229

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             P++SAIGHE D  + D  ADLRA TPT A ++ VP       ++   +ARL   I R 
Sbjct: 230 RTPVVSAIGHERDNPILDLVADLRASTPTDAGKLIVPDATEQTQAVETAKARLRQAITRF 289

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           I  ++  L  +     + N   TL  +  +LD   + L      ++  + R  +H++ R+
Sbjct: 290 IDVEMTHLAQIRSRPVMVNPAATLDIAVEKLDSTLQRLRLATNRVLGAESRDVSHMLERV 349

Query: 358 KSDFLIHNIQKNRQHILEKQ 377
           ++      + +    + + +
Sbjct: 350 RAMSPKATLDRGYAILTDSE 369



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 2/144 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  Q +   +  + Q + + +        +  +   M+       +      +   + R+
Sbjct: 270 EQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMV--NPAATLDIAVEKLDSTLQRL 327

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
               +  + +    VS     +++ + K TL RGY  + D+    IT   +  T   + +
Sbjct: 328 RLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSEGGSITSVDDTDTGAGLSV 387

Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511
              DG     V +           
Sbjct: 388 YLSDGTLGVTVNSLDRRTPNRPTT 411


>gi|218265100|ref|ZP_03478688.1| hypothetical protein PRABACTJOHN_04398 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221589|gb|EEC94239.1| hypothetical protein PRABACTJOHN_04398 [Parabacteroides johnsonii
           DSM 18315]
          Length = 445

 Score =  188 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 93/388 (23%), Positives = 170/388 (43%), Gaps = 27/388 (6%)

Query: 11  DHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------- 62
           +  E+S+ EL+  +K  V +       VR E+S  R   +SGH Y    + ++       
Sbjct: 11  ERQEFSLLELNNRVKEAVLNAFPETCWVRAEMSDVRQNAASGHCYLEFIEKNAITGQLVA 70

Query: 63  RIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-GS 113
           +    IW  T   ++  F  E G       + LV   +        Y + +  + P+   
Sbjct: 71  KARGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-YSLTVLDIDPAYTL 129

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRF 170
           G ++    +  ++L EEG+F+   + P P +P  IAVITSPT A   D L ++      +
Sbjct: 130 GDMIRKRLEIIRQLKEEGVFTLNKELPFPTLPMRIAVITSPTAAGYEDFLNQLSGNKAGY 189

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
           P    +FP  +QG+   + +  A+ ++    +       D++++ RGGG+  DL  F+  
Sbjct: 190 PFYTKLFPALMQGERTEESVIAALDRVYRYVDC-----FDVVVIIRGGGATSDLNSFDSY 244

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
           ++    A   +PII+ IGHE D T+ D  A  R  TPT  AE  +   +     +  L+ 
Sbjct: 245 LLAANCAQFPLPIITGIGHERDDTILDMVAHTRMKTPTAVAEFLIGRMDKAAGEVEELQQ 304

Query: 291 RLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
            + ++   ++  + N L SL   LP  +   +  +R +L R+  +L  +    + +    
Sbjct: 305 EVCSLATDILSRQKNFLQSLGSRLPVLAINRIERNRSQLQRMGMQLPTDAHAFLNQWASK 364

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQ 377
              +  R+ +       ++NR   L +Q
Sbjct: 365 LEAMQVRLANRVESSLAERNRFIQLTEQ 392



 Score = 83.3 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 63/184 (34%), Gaps = 5/184 (2%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           D  L    +   + P  +   L   + +       +   + S      + + +  +    
Sbjct: 267 DTILDMVAHTRMKTPTAVAEFLIGRMDKAAGEVEELQQEVCSLA-TDILSRQKNFLQSLG 325

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             +  +    +  I   + +   +   L       +    + ++ +  R+   +   +  
Sbjct: 326 SRLPVLA---INRIERNRSQLQRMGMQLPTDAHAFLNQWASKLEAMQVRLANRVESSLAE 382

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
            +  + +T + ++  +    LKRGY+     +   I Q   LA    ++  F DG+  + 
Sbjct: 383 RNRFIQLTEQFIKMASPDYVLKRGYSLTL-KDGKIIKQADGLAIGDELVTRFADGEVRST 441

Query: 498 VINK 501
           V+NK
Sbjct: 442 VLNK 445


>gi|32186999|gb|AAP73746.1| XseA [Escherichia coli]
          Length = 307

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 88/360 (24%), Positives = 144/360 (40%), Gaps = 56/360 (15%)

Query: 158 VIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR 216
            + DIL  +  R P L VII+P  VQGD+ P +I  AI   N   E       D++I+ R
Sbjct: 1   ALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNE------CDVLIVGR 54

Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVP 276
           GGGS+EDLW FNDE + RAI  S IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+   
Sbjct: 55  GGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVADLRAPTPSAAAEVVSR 114

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRE 334
            ++ L   + +   RL   +   +  +      +   L      L  +R +   +RL + 
Sbjct: 115 NQQELLRQVQSTHQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKR 174

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +   LE  + R  +    +  ++        I + +  I + +  + +            
Sbjct: 175 MSFALESQLKRAGQQQQRLTRQLVQQNPQSRIHRAQTRIQQLEYRLAE------------ 222

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
                                               L  ++ +           L++ + 
Sbjct: 223 -----------------------------------TLRAQLSATRERFGNAVTHLEAVSP 247

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL 514
            +TL RGY+     +   + Q + +     +     DG   + V      ++   K    
Sbjct: 248 LSTLARGYSVTSAADGAVLKQVKQVKVGETLTTRLGDGVVISEVSAVTKTRKSRKKTSNP 307


>gi|154493806|ref|ZP_02033126.1| hypothetical protein PARMER_03149 [Parabacteroides merdae ATCC
           43184]
 gi|154086419|gb|EDN85464.1| hypothetical protein PARMER_03149 [Parabacteroides merdae ATCC
           43184]
          Length = 445

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 92/393 (23%), Positives = 173/393 (44%), Gaps = 27/393 (6%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62
              + +   +S+ EL+  +K ++ +       VR E+S  R   +SGH Y    + ++  
Sbjct: 6   NNQNQERQAFSLLELNNRVKGVILNAFPETCWVRAEMSDVRTNAASGHCYLEFIEKNAIT 65

Query: 63  -----RIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLI 109
                +    IW  T   ++  F  E G       + LV   I        Y + +  + 
Sbjct: 66  GQLVAKARGSIWAKTFRMLKPYFEMETGQIFASGLKVLVKVSIEFHELYG-YSLTVLDID 124

Query: 110 PS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168
           P+   G ++    +  ++L EEG+F+   + P+P +PK IAVITSPT A   D L +++ 
Sbjct: 125 PAYTLGDMIRKRMEIIRQLKEEGVFTLNKELPLPTLPKRIAVITSPTAAGYEDFLNQLAN 184

Query: 169 ---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225
               +P    +FP  +QG+   + +  A+ ++    +       D++++ RGGG+  DL 
Sbjct: 185 NKAGYPFYPKLFPALMQGERTEESVIAALDRVYRHADC-----FDVVVIIRGGGATSDLN 239

Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285
            F+  ++    A   +PII+ IGHE D T+ D  A  R  TPT  AE  +   +     +
Sbjct: 240 SFDSYLLAANCAQFPLPIITGIGHERDDTILDMVAHTRMKTPTAVAEFLIGQMDKAAGEV 299

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
             L+  + ++   ++  + N L SL   LP  +   +  +R  L R+  +L  +    + 
Sbjct: 300 EELQQDVCSLATEILSRQKNFLQSLGSRLPVLAINRIERNRSLLQRIGMQLPTDAHAFLN 359

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           +       +  R+ +       +++R   L +Q
Sbjct: 360 QWASKLEAMQVRLANRAESSLAERSRFVQLTEQ 392



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 4/136 (2%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + + +  +      +  +    +  I   +     I   L       +    + ++ +  
Sbjct: 314 LSRQKNFLQSLGSRLPVLA---INRIERNRSLLQRIGMQLPTDAHAFLNQWASKLEAMQV 370

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+       +      V +T + ++  +    LKRGY+     +   I Q   L     +
Sbjct: 371 RLANRAESSLAERSRFVQLTEQFIKMASPDYVLKRGYSLTL-KDGKIIKQADGLVVGDEL 429

Query: 486 LINFFDGQANAIVINK 501
           +  F DG+  + V+ K
Sbjct: 430 ITCFADGEVRSKVLKK 445


>gi|325300402|ref|YP_004260319.1| exodeoxyribonuclease VII, large subunit [Bacteroides salanitronis
           DSM 18170]
 gi|324319955|gb|ADY37846.1| exodeoxyribonuclease VII, large subunit [Bacteroides salanitronis
           DSM 18170]
          Length = 432

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 86/395 (21%), Positives = 161/395 (40%), Gaps = 30/395 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61
           ++H   S+ EL+  ++  V  ++     V+ E+S  R  + SGH Y  F  KD       
Sbjct: 1   MEHTPLSLYELNALVRQSVRLSMPDAYWVQAELSDVRTNY-SGHCYLEFVQKDPKSNALL 59

Query: 62  SRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   I+W     +++   E         G++ LV   +        Y + +  + P+  
Sbjct: 60  AKARGIVWSNVFRELKPYFERETGQAFVAGLKVLVRVTVDFHELYG-YSLTVSDIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169
            G +     +  ++L EEG+ +   +  +P + + IAVI+SPT A   D   ++      
Sbjct: 119 LGDMAKRRREILQRLEEEGVLTLNKELELPELTQRIAVISSPTAAGYGDFCDQLERNAFG 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG++    I  A+ ++N         R D++++ RGGG+  DL  F+ 
Sbjct: 179 FVFYTKLFPAVMQGEQVEASIIRALNRINA-----GHGRWDVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +    A   IPII+ IGHE D T+ D  A  R  TPT AAE  +         L    
Sbjct: 234 YELATNCAQFPIPIITGIGHERDDTVIDKVAHTRVKTPTAAAEFLINHLRKTADRLETYA 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +     +   +  +   L   +  +P      +    +R +RL + +    +  + R+  
Sbjct: 294 SFFYQEVPEWLGQQKERLERWVARIPARVQMRIQNEGFRQERLVKRVHLAWQARMMRETY 353

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
                 +   +  L   +Q+    +   +Q +   
Sbjct: 354 RLQL--DGRLNVALQSRLQREGGRLQLLEQQVRAA 386



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 57/160 (35%), Gaps = 6/160 (3%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L   + +         +    +     + + ++ +      I   V+  ++     ++  
Sbjct: 278 LINHLRKTADRLETYASFFYQEVPEW-LGQQKERLERWVARIPARVQMRIQNEGFRQERL 336

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           +  +H+  +    R+      ++ L  R+   L  +++     + +  + +++ + +  L
Sbjct: 337 VKRVHLAWQ---ARMMRETYRLQ-LDGRLNVALQSRLQREGGRLQLLEQQVRAASPELLL 392

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           ++GY+     N   +T    L     ++     G+  + V
Sbjct: 393 QKGYSITL-KNGKAVTDASALHPGDEVVTRVAKGEFKSKV 431


>gi|255011784|ref|ZP_05283910.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis
           3_1_12]
 gi|313149621|ref|ZP_07811814.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis
           3_1_12]
 gi|313138388|gb|EFR55748.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis
           3_1_12]
          Length = 414

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 5   LSLHELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   +        Y + ++ + P+   G + 
Sbjct: 64  TIWANIYRLLKPYFEEATGQSFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F    
Sbjct: 123 RRRREILKQLAEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNSRGFYFNT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +N   E       D++++ RGGG+  DL  F+  ++  
Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARMEE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +   E     L  L   L+ 
Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLINRMEEAADRLEELAGELHA 297

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            I   ++ +   L+ L   +P+   + LS SR +L      L H  E ++ R++     +
Sbjct: 298 RIYHRLEQERKRLSLLQSRIPSQVMRKLSESRIKLQMAKSNLSHAAETLLVRQHHRLELL 357

Query: 354 INRIKSDFLIHNIQK 368
            NRI        +++
Sbjct: 358 QNRIADASPQKLLKR 372



 Score = 93.3 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LI+ +++    + E    +   +      +  E+K    +   +  Q   ++      +
Sbjct: 276 LLINRMEEAADRLEELAGELHARI---YHRLEQERKRLSLLQSRIPSQVMRKLSESRIKL 332

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           +   + +       +   H  + +    +   + +  LKRGY+         +     L 
Sbjct: 333 QMAKSNLSHAAETLLVRQHHRLELLQNRIADASPQKLLKRGYSITL-KEGKAVKNAACLR 391

Query: 481 TKTRILINFFDGQANAIVINK 501
               ++   ++G+  + V + 
Sbjct: 392 PGDELITRLYEGEVKSKVESI 412


>gi|167765360|ref|ZP_02437473.1| hypothetical protein BACSTE_03748 [Bacteroides stercoris ATCC
           43183]
 gi|167696988|gb|EDS13567.1| hypothetical protein BACSTE_03748 [Bacteroides stercoris ATCC
           43183]
          Length = 415

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 28/390 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 4   LSLYELNALVRRSLEQCLPDAYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 63  TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174
              ++  K+L EEG+ +   +  +P +P+ IAV++SPT A   D   ++           
Sbjct: 122 RRRKEILKQLEEEGVLTLNKELRMPRLPQRIAVVSSPTAAGYGDFCHQLQNNPGGFYFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + + +A+ ++N+  +       D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGDRVEESVLSALDKINSRSDS-----FDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE  +         L +L ARL +
Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIDCMNEAADELESLAARLCD 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +  L+  +   L S    +P++    +S ++  L  + +++   +   +FR++     +
Sbjct: 297 GVRNLLVQEQQKLVSYRNRIPSAAYGCISDAKLTLLTVRKDIVQAVTASLFRQHHRLELL 356

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             R+        + +     L+  + I+  
Sbjct: 357 QQRLADASPEKQLARGYSITLKNGKAIKNA 386



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 1/135 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   E +    ++       +  E+++ ++  + +       I      +  +   I   
Sbjct: 282 EAADELESLAARLCDGVRNLLVQEQQKLVSYRNRIPSAAYGCISDAKLTLLTVRKDIVQA 341

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           ++  +   H  + +  + L   + +  L RGY+     N   I     L     I+   +
Sbjct: 342 VTASLFRQHHRLELLQQRLADASPEKQLARGYSITL-KNGKAIKNASLLNEGDEIITRLY 400

Query: 491 DGQANAIVINKAPPK 505
            G+  ++V NK   K
Sbjct: 401 KGEVVSVVTNKLSKK 415


>gi|296128823|ref|YP_003636073.1| exodeoxyribonuclease VII, large subunit [Cellulomonas flavigena DSM
           20109]
 gi|296020638|gb|ADG73874.1| exodeoxyribonuclease VII, large subunit [Cellulomonas flavigena DSM
           20109]
          Length = 421

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 14/366 (3%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65
           ++     + V  L+  +   V + +  V V G++   R  +S    + +L+D      I 
Sbjct: 25  DTTPERPWPVRHLAPKVADYV-ARMPPVWVEGQLLNVRRWNSL--LFLTLRDTDLDMSIS 81

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
             +       +     +G   +V  +              + +   G G LL  +E+ K 
Sbjct: 82  VTLPAVAAMSLGDRFADGAHVVVHARPQYQVKKGSLGFAADRVRLVGLGELLARIEQLKG 141

Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184
            L  EGLF D  K  +PF+P ++ ++ +  G    D++     R+P ++  I  V VQG 
Sbjct: 142 VLAAEGLFDDARKRALPFLPGVVGLVCAQQGDAEHDVVSNARARWPAVQFEIRRVTVQGP 201

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
               E++ AI       E    PR +++++ARGGGS EDL  F++E +VRA A    P++
Sbjct: 202 SAVPEVSAAIA------ELDADPRVEVVVVARGGGSFEDLLPFSNETLVRAAAACRTPLV 255

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGH  D  L D  ADLRA TPT AA+  VP     ++ L+    R    +   +  + 
Sbjct: 256 SAIGHHMDSPLLDLVADLRASTPTDAAKRVVPDVTEERARLVQARTRTRAAVQHRLAREE 315

Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +TL  L     L   +  +      L RL       ++  +         +  ++++   
Sbjct: 316 STLAHLRSRPVLARPETLVDPHVDVLRRLTARGRAVVDAAVALAATETARLAGQVRALSP 375

Query: 363 IHNIQK 368
              +++
Sbjct: 376 AATLER 381



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 56/161 (34%), Gaps = 5/161 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                    ++  +++       ++    + E++  + Q   +    +      + + L 
Sbjct: 260 HHMDSPLLDLVADLRASTPTDAAKRVVPDVTEERARLVQARTRTRAAVQHRLAREESTLA 319

Query: 404 MLR-----EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            LR      + +  +      +++L  R   ++   +    T  +     +++ +   TL
Sbjct: 320 HLRSRPVLARPETLVDPHVDVLRRLTARGRAVVDAAVALAATETARLAGQVRALSPAATL 379

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           +RGY  +Q  +   +    ++    R+ +    G+  A V 
Sbjct: 380 ERGYAVVQRADGVVVRSPDDVTAGDRLRVRVAAGELTAEVT 420


>gi|160890668|ref|ZP_02071671.1| hypothetical protein BACUNI_03113 [Bacteroides uniformis ATCC 8492]
 gi|270295765|ref|ZP_06201965.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D20]
 gi|317479801|ref|ZP_07938921.1| exonuclease VII [Bacteroides sp. 4_1_36]
 gi|156859667|gb|EDO53098.1| hypothetical protein BACUNI_03113 [Bacteroides uniformis ATCC 8492]
 gi|270273169|gb|EFA19031.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D20]
 gi|316904007|gb|EFV25841.1| exonuclease VII [Bacteroides sp. 4_1_36]
          Length = 410

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 4   LSLYELNALVRRSLEQCLPDECWVQAELSDVRTN-STGHCYLEFVQKDPRSNSLIAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 63  TIWANVFRLLKPYFEEATGQAFVAGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L EEG+ +   +  +P +P+ IAVI+SPT A   D   ++      F    
Sbjct: 122 RRRREILKQLEEEGVLTLNKELDMPRLPQRIAVISSPTAAGYGDFCHQLENNSRGFYFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + + +A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGDRVEESVLSALDRVNARLSE-----FDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE  +   +     L  L +RL+ 
Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIESMDSAADELEMLASRLHE 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +  L++ +   L+     +P++    +S ++  L  + +++   +   +FR       +
Sbjct: 297 GVRNLLQQEQRRLSGYKNRIPSAAYHRISDAKMALLTVRKDVVQAVTSSLFRHRHRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 QQRLADASPEKLLAR 371



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
           FLI ++      +      + + V+     +  E++      + +     +RI      +
Sbjct: 275 FLIESMDSAADELEMLASRLHEGVRN---LLQQEQRRLSGYKNRIPSAAYHRISDAKMAL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             +   +   ++  +      + +  + L   + +  L RGY+     +   +     L 
Sbjct: 332 LTVRKDVVQAVTSSLFRHRHRLELLQQRLADASPEKLLARGYSITL-KDGKVVKNADELQ 390

Query: 481 TKTRILINFFDGQANAIV 498
               I     +G+  +IV
Sbjct: 391 ENDMITTRLQNGEVVSIV 408


>gi|288800053|ref|ZP_06405512.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288333301|gb|EFC71780.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 436

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 88/514 (17%), Positives = 176/514 (34%), Gaps = 100/514 (19%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61
           +N+      S+ +L+  +  ++  +      V  EIS  R +   GH Y  L  KD    
Sbjct: 2   ENNNSQTHLSLYQLNNLVSEVISLSFNQDFWVEAEISEIREVR--GHCYIELIEKDEKMN 59

Query: 62  ---SRIDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
              ++  A  W      I+           + G++ L+  +         +  II  + P
Sbjct: 60  TPIAKASAKCWSNKWMFIKPHFERVTRQCLKAGMKVLLKVEAQFHEAFG-FAWIINYIDP 118

Query: 111 SG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC- 168
           +   G++    +     L  +G++  Q +  +P   K IAVI+S   A   D +Q +   
Sbjct: 119 TFTLGSMAKKRKDIIDALKAQGVYDLQKELYMPLFAKRIAVISSEGAAGYGDFMQHLVHN 178

Query: 169 --RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226
              F   V +F   +QG+   + + +A+  +N         + D++++ RGGG   DL  
Sbjct: 179 EYGFVFEVALFNAVMQGEGIEQSVISALNAIN-----DKLSQFDVVVMIRGGGGTSDLSG 233

Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           F+   +   IAN  IP+I+ IGH+ D ++ D  +  +  TPT AA+  +     + S + 
Sbjct: 234 FDSLALAENIANFPIPVINGIGHDRDESVLDLISFEQVKTPTAAADYFINHALRVYSRID 293

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            L+  +                            +   R +L RL  ++     ++  ++
Sbjct: 294 TLQQYVVTYAQNR---------------------IELERNKLQRLAEKVPIVFSVVKTKQ 332

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
             +   ++ R+    +   I   ++ +    Q +                          
Sbjct: 333 EGYIQQLLQRL-LIGMQSTITHQQRTVDMLDQRLNNA----------------------- 368

Query: 407 EQTKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
              K  +      +  L  +I  +     ++                        GY+  
Sbjct: 369 --PKYILNSKQHRLTLLNEKIRSLDPQRILER-----------------------GYSIT 403

Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
              N   +   + L     I   F DG   +I+ 
Sbjct: 404 LH-NGKSVLNAKELKKGDEITTKFKDGIITSIIK 436


>gi|167626295|ref|YP_001676795.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596296|gb|ABZ86294.1| Exodeoxyribonuclease VII [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 461

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 94/506 (18%), Positives = 183/506 (36%), Gaps = 78/506 (15%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66
           +SE    +K  +E +  +    V  E+S +R    SG H Y  L ++        ++I  
Sbjct: 7   LSEFLELIKSTIEMSFGYEGFWVVAELSEWR---RSGKHYYGELIEHDGVSKFPIAKIRC 63

Query: 67  IIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W   +  I  +F        +  ++ L    +  +  S    + I  + P+   G   
Sbjct: 64  NCWANKVEHIHSKFSQATGETLKTDMKVLFKVSVN-YHTSFGLSLNIIDIDPAFTLGDRQ 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174
               +  + L + G+        +P     +AVITS T A   D      ++        
Sbjct: 123 ARKIEILQNLSKNGILEKNKVLNMPDDFTNVAVITSMTAAGKGDFFEEADKLQDLNLCNF 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            I+  K+QG EC K ++ A  ++ T+       + D+I+L RGGGS  DL  FN+ +   
Sbjct: 183 DIYEAKMQGAECAKSVSIAFAKIATIAV-----KYDVIVLIRGGGSQADLDWFNNILPAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           +I NS IP++  IGHE D T+ D     R  TP+                          
Sbjct: 238 SICNSEIPVLVGIGHERDSTVLDEICTKRFDTPSKVINYIA------------------- 278

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               ++   IN   +    +  +      ++++LD L    +  +E  +++  +  +H  
Sbjct: 279 --NTIVDNAINAKYNYESIVRITKSLAKQNKHQLDNLYHNFKTRIEHYLYQMSQSVDH-- 334

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
                                   + ++          L  K    +   +   +K+ I 
Sbjct: 335 ------------------------NYKESTSIARGVSKLYDKTVNTMYENILLSSKSLIR 370

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
               +I     +      + +K  + +     + + S + + TLKRG++  +  +  +IT
Sbjct: 371 SYGNNIYNSYNQSTNTARNILKYYNQTSESLYKQILSVSIEPTLKRGFSLTKTIDGKYIT 430

Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500
            ++     + + I + DG     V  
Sbjct: 431 TQKQAQAYSDLEIVYADGHIQVEVKE 456


>gi|314976375|gb|EFT20470.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL045PA1]
          Length = 415

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G++   + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMKVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP  P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVSPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|282878531|ref|ZP_06287312.1| exodeoxyribonuclease VII, large subunit [Prevotella buccalis ATCC
           35310]
 gi|281299322|gb|EFA91710.1| exodeoxyribonuclease VII, large subunit [Prevotella buccalis ATCC
           35310]
          Length = 431

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/393 (20%), Positives = 155/393 (39%), Gaps = 30/393 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            ++ EL+  ++  +++ + +   V  E+S  R +   GH Y  L  KD       ++  A
Sbjct: 5   LTLFELNELVRETLQTTMPNEYWVEAELSEVREVR--GHCYMELVQKDERTNTPVAKASA 62

Query: 67  IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
             WK     +          +   G++ L+            +  I+  + P    G + 
Sbjct: 63  KCWKNKWMLMRPYFERTTGQVLRAGMKVLLKVYANFHEAYG-FSWIVTDIDPVYTMGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR---FPLRV 174
              ++   +L  EG+F  Q    +    + +AVI+S   A   D L+++      F   V
Sbjct: 122 RRRQEIIAQLKAEGVFDLQKDLHLSMFARRVAVISSEQAAGYGDFLRQLKDCEQGFNFEV 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+     +  A+  +N   +       D++++ RGGG+  DL  F+   +  
Sbjct: 182 QLFPAVMQGERVEPSVIEALNHINAQVDD-----FDVVVIIRGGGATSDLSGFDTLSLAE 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGHE D ++ D  +  R  TPT AA   +       + + + ++ +  
Sbjct: 237 NVANFPLPIITGIGHERDESVLDMVSFRRVKTPTAAAAYLIDNLADTLARINDAQSEMVQ 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           I+   ++++ N    +   +P     +      RL +   +L       I     H   +
Sbjct: 297 IVRHCMEHQKNRFVRVSSKIPVLFSHVRVRQEERLQQYFLQLTARASRKISDSQHHVQVL 356

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
            N +K       I      +   QQ  + +  Q
Sbjct: 357 SNSLKPMT-ERKIVTEGHRLDMLQQRCKSLDPQ 388



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 4/137 (2%)

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
            H ++  +   +     I  +            ++    L     +   +I     H++ 
Sbjct: 299 RHCMEHQKNRFVRVSSKIPVLFSHVRVRQEERLQQYFLQLTA---RASRKISDSQHHVQV 355

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
           L   ++ +   KI +    + +  +  +S   +  L RGY+         +     L T 
Sbjct: 356 LSNSLKPMTERKIVTEGHRLDMLQQRCKSLDPQLLLSRGYSITLH-QGRAVRHASELKTG 414

Query: 483 TRILINFFDGQANAIVI 499
             I     +G   +I+ 
Sbjct: 415 DEIETRVENGTFKSIIK 431


>gi|265767769|ref|ZP_06095301.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_16]
 gi|263252441|gb|EEZ23969.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_16]
          Length = 410

 Score =  186 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 5   LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   +        Y + ++ + P+   G + 
Sbjct: 64  TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  ++L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F  R 
Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +N   +       D++++ RGGG+  DL  F+  ++  
Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +   E     L  L   L+ 
Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L   +P+   + LS SR +L      L H  E ++ R++     +
Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKNNLSHAAETLLARQHHRLELL 357

Query: 354 INRIKSDFLIHNIQK 368
            NRI        +++
Sbjct: 358 QNRIADASPQKLLKR 372



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 13/133 (9%), Positives = 43/133 (32%), Gaps = 1/133 (0%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  +         E++  +    +  E++    +   +  Q   ++      ++    
Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKN 337

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +       +   H  + +    +   + +  LKRGY+     +   +     L     +
Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQPGDEL 396

Query: 486 LINFFDGQANAIV 498
           +   ++G+  + V
Sbjct: 397 ITRLYEGEVKSRV 409


>gi|299530082|ref|ZP_07043509.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           S44]
 gi|298722062|gb|EFI62992.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           S44]
          Length = 200

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 2/198 (1%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           + V  L + +   +++  + V VRGE+SG+    +SGH YF+LKD   +I   +++    
Sbjct: 2   WEVGALCHAIGDALQARFNPVAVRGELSGF-SRAASGHCYFNLKDASGQIRCAMFRRAAE 60

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           ++ F P +G    V G++  +      Q+++ES+  +G G L     + K +L  EGLF 
Sbjct: 61  QVGFSPRDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKAQLESEGLFD 120

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
              K  +P +P+ I ++TS   A + D++  +  R P + V+I P  VQG + P+ +  A
Sbjct: 121 PARKRSLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVIVPALVQGLQAPQSLVQA 180

Query: 194 ILQLNTLKEGRTCPRPDI 211
           + +L  L +       D+
Sbjct: 181 LSKLYLLTQEGQDASGDL 198


>gi|53715283|ref|YP_101275.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis YCH46]
 gi|52218148|dbj|BAD50741.1| putative exodeoxyribonuclease VII large subunit [Bacteroides
           fragilis YCH46]
 gi|301164738|emb|CBW24297.1| putative exodeoxyribonuclease VII large subunit [Bacteroides
           fragilis 638R]
          Length = 410

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 5   LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   +        Y + ++ + P+   G + 
Sbjct: 64  TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  ++L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F  R 
Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +N   +       D++++ RGGG+  DL  F+  ++  
Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +   E     L  L   L+ 
Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L   +P+   + LS SR +L      L H  E ++ R++     +
Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357

Query: 354 INRIKSDFLIHNIQK 368
            NRI        +++
Sbjct: 358 QNRIADASPQKLLKR 372



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 13/133 (9%), Positives = 44/133 (33%), Gaps = 1/133 (0%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  +         E++  +    +  E++    +   +  Q   ++      ++   +
Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKS 337

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +       +   H  + +    +   + +  LKRGY+     +   +     L     +
Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQPGDEL 396

Query: 486 LINFFDGQANAIV 498
           +   ++G+  + V
Sbjct: 397 ITRLYEGEVKSRV 409


>gi|60683219|ref|YP_213363.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis NCTC
           9343]
 gi|60494653|emb|CAH09454.1| putative exodeoxyribonuclease VII large subunit [Bacteroides
           fragilis NCTC 9343]
          Length = 410

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 5   LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   +        Y + ++ + P+   G + 
Sbjct: 64  TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  ++L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F  R 
Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +N   +       D++++ RGGG+  DL  F+  ++  
Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +   E     L  L   L+ 
Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L   +P+   + LS SR +L      L H  E ++ R++     +
Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357

Query: 354 INRIKSDFLIHNIQK 368
            NRI        +++
Sbjct: 358 QNRIADASPQKLLKR 372



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 13/133 (9%), Positives = 45/133 (33%), Gaps = 1/133 (0%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +  +         E++  +    +  E++    +   +  Q   ++      ++   +
Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKS 337

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
            +       +   H  + +    +   + +  LKRGY+     +   +     L +   +
Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQSGDEL 396

Query: 486 LINFFDGQANAIV 498
           +   ++G+  + V
Sbjct: 397 ITRLYEGEVKSRV 409


>gi|145640356|ref|ZP_01795940.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           R3021]
 gi|145274942|gb|EDK14804.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae
           22.4-21]
          Length = 284

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 56/336 (16%)

Query: 166 ISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224
           ++ R P L+V+I+P  VQG E   EI   I   N  +E       D++I+ RGGGS+EDL
Sbjct: 1   MARRDPSLKVVIYPTAVQGKEATAEIVQMIELANVRQE------VDVLIVGRGGGSLEDL 54

Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284
           W FN+E + RAI  S++PIISA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   
Sbjct: 55  WCFNEEEVARAIFRSTLPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQ 114

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEII 342
           L + + RL+    RL   K   L  +   L   +    L   + + ++L   L+  +   
Sbjct: 115 LRHQQQRLDMAFDRLFTRKSQRLKQITLRLHNQHPQNQLRVQQAKNEQLTHRLQLAMLRQ 174

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
                + F  + +R+K + L + +Q+++Q + + Q                         
Sbjct: 175 FENTQQKFTALSSRLKQNPLPYRVQRHQQRLEQLQVR----------------------- 211

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
                                   + F ++ ++  C   ++     L   +    L RGY
Sbjct: 212 ------------------------LNFCVNRQVTECQNKLATLCGKLDGLSPLKVLARGY 247

Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           +  +++    I   +++     I     DG+  + V
Sbjct: 248 SIAENSQGKAIVSVKDVNQGDFITTQVADGKIVSKV 283


>gi|294672950|ref|YP_003573566.1| exodeoxyribonuclease VII large subunit [Prevotella ruminicola 23]
 gi|294471813|gb|ADE81202.1| exodeoxyribonuclease VII, large subunit [Prevotella ruminicola 23]
          Length = 411

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 31/374 (8%)

Query: 16  SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAI 67
           ++ EL+  ++  +E  L     V  E+S  R   S GH Y  L  KD       ++  A 
Sbjct: 8   TLFELNRLVREAIEDALPMEYWVEAELSECRE--SRGHCYMELIQKDEQTATPIAKASAK 65

Query: 68  IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118
            W      I              G++ L+            +  I+  + P+   G +  
Sbjct: 66  CWANKWLTIRPYFERTTGQQLHAGMKVLLQVYPQFHEAYG-FSWIVTDIDPTYTLGDMAR 124

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175
             ++  +KL  EG+F  Q +  +P   + IAVI+S T A   D   +++     F     
Sbjct: 125 KRQEIIQKLKAEGVFDLQKELQLPVFCQRIAVISSQTAAGYGDFCNQLADNPYGFKFETQ 184

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +FP  +QG+   + I +A+ Q+  +         D +++ RGGG+  D+  F+   +   
Sbjct: 185 LFPAIMQGEGVEQSIISALEQIYDMP-------FDCVVIIRGGGATSDMSGFDTLALAEN 237

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +AN  IPII+ IGHE D ++ D  +  R  TPT AA + +   + +  ++   ++ + + 
Sbjct: 238 VANFPIPIITGIGHERDESILDMISHTRVKTPTAAAALLIDHLKGVLETIEGAQSMITHY 297

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHII 354
           + +      + L+ + +A+P     +   +  ++D L   L   +E     +      + 
Sbjct: 298 VQQKFSIANSQLSIISEAIPRLFSIVKTRQEAKIDALYTRLPMLIERRFTSERHRLQLMD 357

Query: 355 NRIKSDFLIHNIQK 368
            ++K+      + +
Sbjct: 358 EKLKALDPTLLLAR 371



 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 2/122 (1%)

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCH 439
           + ++  +++  F     +++I+     +  + +       I  L TR+  ++  +  S  
Sbjct: 291 QSMITHYVQQKFSIANSQLSIISEAIPRLFSIVKTRQEAKIDALYTRLPMLIERRFTSER 350

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
             + +    L++      L RGY+     N   +     L     I      G  ++++ 
Sbjct: 351 HRLQLMDEKLKALDPTLLLARGYSITMH-NGRAVKDASQLPPGAEIETRLAKGTIHSVIK 409

Query: 500 NK 501
           + 
Sbjct: 410 SV 411


>gi|253567174|ref|ZP_04844624.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 3_2_5]
 gi|251944005|gb|EES84524.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 3_2_5]
          Length = 410

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 5   LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   +        Y + ++ + P+   G + 
Sbjct: 64  TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  ++L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F  R 
Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +N   +       D++++ RGGG+  DL  F+  ++  
Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +   E     L  L   L+ 
Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHA 297

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L   +P+   + LS SR +L      L H  E ++ R++     +
Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357

Query: 354 INRIKSDFLIHNIQK 368
            NRI        +++
Sbjct: 358 QNRIADASPQKLLKR 372



 Score = 93.3 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 14/138 (10%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LI  +++    +    + +   V      +  E++    +   +  Q   ++      +
Sbjct: 276 LLIDRMEEAADRLGALAEELHARVFYR---LEQERRRLALLQARIPSQVMRKLSESRIKL 332

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           +   + +       +   H  + +    +   + +  LKRGY+     +   +     L 
Sbjct: 333 QMAKSNLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQ 391

Query: 481 TKTRILINFFDGQANAIV 498
           +   ++   ++G+  + V
Sbjct: 392 SGDELITRLYEGEVMSRV 409


>gi|213619224|ref|ZP_03373050.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 291

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 56/342 (16%)

Query: 165 RISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223
            +  R P L VII+P  VQGD+ P +I  AI   NT  E       D++I+ RGGGS+ED
Sbjct: 1   MLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLED 54

Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283
           LW FNDE + RAI  S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L  
Sbjct: 55  LWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLR 114

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEI 341
            + + + RL   +   +  +      +   L      L  +R +   +RL + +   LE 
Sbjct: 115 QIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEA 174

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            I +  +    +  R+        I + +  I + +                        
Sbjct: 175 RIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR---------------------- 212

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
                                    +   +  ++             L++ +   TL RG
Sbjct: 213 -------------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARG 247

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           YT    T+   + + + +     +     DG   + V +  P
Sbjct: 248 YTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 289


>gi|328752563|gb|EGF66179.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL020PA1]
          Length = 415

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P  I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPHGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 86.0 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|319900023|ref|YP_004159751.1| Exodeoxyribonuclease VII large subunit [Bacteroides helcogenes P
           36-108]
 gi|319415054|gb|ADV42165.1| Exodeoxyribonuclease VII large subunit [Bacteroides helcogenes P
           36-108]
          Length = 411

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ +L+  ++H +E  L     V+ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 4   LSLYDLNALVRHSIEQCLPDEFWVQAELSDVRTN-STGHCYLEFVQKDLRSNNLIAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            +W      ++   EE        GI+ LV   +        Y ++++ + P+   G + 
Sbjct: 63  TVWANVFRLLKPYFEETTGQAFVAGIKVLVQVTVNFHELYG-YSLVVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
              ++  K+L EEG+ +   +  IP +P+ IA+I+SPT A   D   ++      F    
Sbjct: 122 RRRKEILKQLEEEGVLTLNKELEIPRLPQHIAIISSPTAAGYGDFCHQLQNNPRGFYFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+   + +  A+  +N           D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGERVEESVLAALDNINARLSE-----FDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AA        +    L  L  RL  
Sbjct: 237 ACAQFPLPIITGIGHERDDTVIDSVAHTRVKTPTAAAGFLTECMNNAADELDLLAGRLQE 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +  L+ ++ + L +   ++P++  + +S ++  L    R++E  +   + R +     +
Sbjct: 297 GVRNLLMHERHKLFAYKNSIPSAAYRRISEAKLALLTAHRDIEQTVTSFLSRHHHRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 QQRLADASPEKQLAR 371



 Score = 84.4 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
           FL   +      +      +++ V+     +  E+ +  A  + +      RI      +
Sbjct: 275 FLTECMNNAADELDLLAGRLQEGVRN---LLMHERHKLFAYKNSIPSAAYRRISEAKLAL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 IE  ++  +   H  + +  + L   + +  L RGY+     +   +   + L 
Sbjct: 332 LTAHRDIEQTVTSFLSRHHHRLELLQQRLADASPEKQLARGYSITL-KDGKVVKNAKLLR 390

Query: 481 TKTRILINFFDGQANAIV 498
           T   I+   ++G+  +IV
Sbjct: 391 TDDEIVTRLYEGELTSIV 408


>gi|295130138|ref|YP_003580801.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           SK137]
 gi|291375409|gb|ADD99263.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           SK137]
 gi|313771468|gb|EFS37434.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL074PA1]
 gi|313811405|gb|EFS49119.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL083PA1]
 gi|313830840|gb|EFS68554.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL007PA1]
 gi|313833268|gb|EFS70982.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL056PA1]
 gi|314973728|gb|EFT17824.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL053PA1]
 gi|314983342|gb|EFT27434.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL005PA1]
 gi|315080213|gb|EFT52189.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL078PA1]
 gi|315096503|gb|EFT68479.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL038PA1]
 gi|327326753|gb|EGE68536.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL096PA2]
 gi|327443046|gb|EGE89700.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL043PA1]
 gi|327445169|gb|EGE91823.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL043PA2]
 gi|328760252|gb|EGF73825.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL099PA1]
          Length = 415

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP  P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVSPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|314966297|gb|EFT10396.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL082PA2]
          Length = 415

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPIVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|261879227|ref|ZP_06005654.1| exodeoxyribonuclease VII [Prevotella bergensis DSM 17361]
 gi|270334176|gb|EFA44962.1| exodeoxyribonuclease VII [Prevotella bergensis DSM 17361]
          Length = 432

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/398 (21%), Positives = 170/398 (42%), Gaps = 30/398 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NH 61
           +     ++ EL+  ++ ++E+ LS    V  E+S        GH Y  L  KD       
Sbjct: 1   MSQTRLTLFELNSLVRGVLETTLSSAYWVEAELSE--AREVRGHCYMELIQKDLFSATPV 58

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           +R  A  WK    ++    E+        G++ L++  +        +  I++ + P+  
Sbjct: 59  ARASAKCWKTQWTRLRPKFEQITGQPLHAGMKVLLLVTVNFHEAYG-FSWIVQDIDPTYT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCR 169
            G +     +  ++L E+G+F  Q +  IP   + IAVI+S   A   D   ++      
Sbjct: 118 MGDMARKRLEIIRQLKEQGIFDMQKELSIPMFAQRIAVISSEHAAGYGDFCNQLETNDYG 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           F     +FP  +QG++    I  A+  +N   +       D +++ RGGG+  D+  F+ 
Sbjct: 178 FVFYPKLFPAVMQGEQVEHSIIAALNDINAQAQQ-----FDAVVIIRGGGATADMSGFDT 232

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
            ++   +AN  +P+I+ IGHE D ++ D  ++ R  TPT AA   +    ++ + + N +
Sbjct: 233 LLLAENVANFPLPVITGIGHERDESILDMVSNTRVKTPTAAAAFLIGNLANVWTHIGNCQ 292

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYR 348
            R+   + + ++ + N LN     +P     +   +  RLDRL  ++   +   + +   
Sbjct: 293 DRIVTCVGQRMERQRNRLNRCADRIPMLFSLVKTRQEARLDRLAAQMVSLIGNRLTQNRH 352

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
               I   I+   +   I +   H+ +    ++ +   
Sbjct: 353 RLQLICTNIRP-AIARRITRENNHLEQLDIRLKALDPH 389



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +++ R  +      I  +                A +  L     NR+      ++ +
Sbjct: 301 QRMERQRNRLNRCADRIPMLFSLVKTRQEARLDRLAAQMVSL---IGNRLTQNRHRLQLI 357

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483
            T I   ++ +I   +  +      L++      LKRGY+         +     +    
Sbjct: 358 CTNIRPAIARRITRENNHLEQLDIRLKALDPHTLLKRGYSITLHK-GKAVRDVSEVKAGD 416

Query: 484 RILINFFDGQANAIV 498
            I     +G+  +IV
Sbjct: 417 EIETQVENGRIISIV 431


>gi|313808128|gb|EFS46602.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL087PA2]
          Length = 415

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+       + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQTRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQTRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|314922867|gb|EFS86698.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL001PA1]
 gi|315093462|gb|EFT65438.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL060PA1]
 gi|315103018|gb|EFT74994.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL050PA2]
 gi|327327078|gb|EGE68859.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL103PA1]
          Length = 415

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|282854463|ref|ZP_06263800.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           J139]
 gi|282583916|gb|EFB89296.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           J139]
          Length = 417

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 3   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 59

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 60  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 118

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 119 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 178

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 179 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 232

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 233 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 292

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 293 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 352

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 353 AMSPKATLDRGYAILADTE 371



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 271 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 328

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 329 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 388

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 389 VYLSDGTLSVTVDSLDRRTPNRPT 412


>gi|50842055|ref|YP_055282.1| exodeoxyribonuclease VII large subunit [Propionibacterium acnes
           KPA171202]
 gi|289425830|ref|ZP_06427584.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           SK187]
 gi|289426773|ref|ZP_06428501.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           J165]
 gi|50839657|gb|AAT82324.1| exodeoxyribonuclease VII large subunit [Propionibacterium acnes
           KPA171202]
 gi|289153773|gb|EFD02480.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           SK187]
 gi|289160099|gb|EFD08275.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           J165]
 gi|313764001|gb|EFS35365.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL013PA1]
 gi|313791657|gb|EFS39775.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL110PA1]
 gi|313802256|gb|EFS43482.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL110PA2]
 gi|313812588|gb|EFS50302.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL025PA1]
 gi|313814872|gb|EFS52586.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL059PA1]
 gi|313818895|gb|EFS56609.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL046PA2]
 gi|313820722|gb|EFS58436.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL036PA1]
 gi|313822511|gb|EFS60225.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL036PA2]
 gi|313825693|gb|EFS63407.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL063PA1]
 gi|313828035|gb|EFS65749.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL063PA2]
 gi|313839024|gb|EFS76738.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL086PA1]
 gi|314915033|gb|EFS78864.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL005PA4]
 gi|314918636|gb|EFS82467.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL050PA1]
 gi|314920444|gb|EFS84275.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL050PA3]
 gi|314925637|gb|EFS89468.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL036PA3]
 gi|314932118|gb|EFS95949.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL067PA1]
 gi|314954616|gb|EFS99022.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL027PA1]
 gi|314958585|gb|EFT02687.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL002PA1]
 gi|314959811|gb|EFT03913.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL002PA2]
 gi|314962384|gb|EFT06485.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL082PA1]
 gi|314968345|gb|EFT12444.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL037PA1]
 gi|314979194|gb|EFT23288.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL072PA2]
 gi|314986748|gb|EFT30840.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL005PA2]
 gi|314989490|gb|EFT33581.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL005PA3]
 gi|315077470|gb|EFT49530.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL053PA2]
 gi|315084096|gb|EFT56072.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL027PA2]
 gi|315085298|gb|EFT57274.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL002PA3]
 gi|315089087|gb|EFT61063.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL072PA1]
 gi|315098910|gb|EFT70886.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL059PA2]
 gi|315100850|gb|EFT72826.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL046PA1]
 gi|315107212|gb|EFT79188.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL030PA1]
 gi|327330550|gb|EGE72297.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL096PA3]
 gi|327450150|gb|EGE96804.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL087PA3]
 gi|327455123|gb|EGF01778.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL092PA1]
 gi|327455293|gb|EGF01948.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL083PA2]
 gi|328752815|gb|EGF66431.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL087PA1]
 gi|328759261|gb|EGF72877.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL025PA2]
 gi|332674978|gb|AEE71794.1| exodeoxyribonuclease 7 large subunit [Propionibacterium acnes 266]
          Length = 415

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|327331079|gb|EGE72819.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL097PA1]
          Length = 415

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|314980824|gb|EFT24918.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL110PA3]
 gi|315090289|gb|EFT62265.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL110PA4]
          Length = 415

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 174/379 (45%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
             ++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TSVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L  +     + N   TL  +  RLD   + L      I+  + R  NH++ R++
Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRILDAEGRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRILDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|332295325|ref|YP_004437248.1| exodeoxyribonuclease VII, large subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332178428|gb|AEE14117.1| exodeoxyribonuclease VII, large subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 459

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 97/496 (19%), Positives = 193/496 (38%), Gaps = 73/496 (14%)

Query: 11  DHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64
           ++   ++ EL+  ++++++ N  S + +  EIS     ++SG     L   KD+   ++ 
Sbjct: 3   NNRFLTLYELNLLIQNVIKDNFESDILLTAEISRIV-YNASGFVSIELIEKKDDQIIAKN 61

Query: 65  DAIIWKGTLNKIEF-------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTL 116
            A+IW      I+           EG++ L   K+  +  S    + I ++ PS   G +
Sbjct: 62  RALIWNDKKFIIDVFETIVGEKLSEGMKILAKVKV-LYHPSYGLTLNILNIDPSYTIGEM 120

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPLR 173
                    KL  EGL        +   P+ IA+I+S + A   D ++ +      +   
Sbjct: 121 QLKKNNILSKLKNEGLLELNKALELSIAPQNIALISSESAAGYEDFIRHLIYNEKGYAFN 180

Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233
           V +FP  +QG +    I  ++  +            +++++ RGGGS+ +L  FN   + 
Sbjct: 181 VKLFPSVMQGKDVESSIIRSLDAI------AEYRNFEVVVIVRGGGSVGELDCFNSYNLA 234

Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293
           + IA   IP++  IGH+ D T+ D+ A      PT  A                      
Sbjct: 235 KKIAKFPIPVLVGIGHDRDKTILDFVAYEGFKNPTAVAHFL------------------- 275

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
             I R+  ++ +  + L K    S + +      ++R+   ++      +       N+I
Sbjct: 276 --INRVEDFENDLKDRLYKIFSLSSEKVDKETKIVERISIRIKEKALESLSVSKSSINYI 333

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
            NRI  DFL                          R I  EK++   IL  +  +   ++
Sbjct: 334 GNRIFPDFL--------------------------RRIGQEKRKNDKILFNIFSKLNEKV 367

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473
              ++ ++    R++     K++     V+   + ++    +  LKRG++     N   I
Sbjct: 368 RNEYSFLQGKEYRLKNEAFAKLQENKNLVTNFEKEIRLKDPREILKRGFSITTL-NGKTI 426

Query: 474 TQKRNLATKTRILINF 489
               ++   + IL +F
Sbjct: 427 KNYEDVKEGSNILTHF 442


>gi|315108068|gb|EFT80044.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL030PA2]
          Length = 415

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  D+I++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
             ++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TSVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|327446887|gb|EGE93541.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes
           HL013PA2]
          Length = 415

 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 4   FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61
             + N+ D+P  S++ +   +K  VE     + V+ ++       SS   + +L+D    
Sbjct: 1   MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
               A   +  L+      E G+    + + T +  + +    I  + P+G G LL  LE
Sbjct: 58  ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180
           +RK+ L  EGLF      PIP +P+ I +IT       RD+ +  + R+P  R ++   +
Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           VQG         A   +  L +    P  DII++ARGGG +EDL  F+DE +VRA+  + 
Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDIIVIARGGGPLEDLLPFSDEALVRAVYATR 230

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
            P++SAIGH+ D  + D  ADLRA TPT A ++ VP       ++    A+L   + R I
Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290

Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             +   L+ +     + N   TL  +  RLD   + L      ++  + R  NH++ R++
Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350

Query: 359 SDFLIHNIQKNRQHILEKQ 377
           +      + +    + + +
Sbjct: 351 AMSPKATLDRGYAILADTE 369



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  Q I   +  + Q V + +        +  +   M+       +      +   + R
Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           +       + +    V+     +++ + K TL RGY  + DT  + IT   +   +  +L
Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386

Query: 487 INFFDGQANAIVINKAPPKEQPTK 510
           +   DG  +  V +          
Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410


>gi|227499440|ref|ZP_03929551.1| possible exodeoxyribonuclease VII [Anaerococcus tetradius ATCC
           35098]
 gi|227218502|gb|EEI83745.1| possible exodeoxyribonuclease VII [Anaerococcus tetradius ATCC
           35098]
          Length = 394

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 176/372 (47%), Gaps = 16/372 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV + + + K  ++ +    ++ + G+++  R  +S  H YFSLK++   ID +I+   
Sbjct: 5   LSVKQFNEYFKSNIKHDPIFQNLYINGQLANIRINNS--HLYFSLKEDTDIIDCVIYYYE 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPG-SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              ++F  E G + LV G +  +   SS+  I+   ++  G         K K++  ++G
Sbjct: 63  DKAVDFDFEVGKDILVRGNV-LYNNYSSRIVIVANEVVEKGISDNYLQFIKMKEEFRKKG 121

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190
            F   +K  I   P  I +ITS  GA I D L  I+ +   + + ++PVKVQG +    I
Sbjct: 122 YFDISNKKEISQYPNKIGLITSQEGAAIVDFLSVINQKPNDIHIYLYPVKVQGTDSSLMI 181

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
           + A+  L+           D+I++ RGGGS EDL  FND  ++ A+ ++  PIISAIGH+
Sbjct: 182 SKAVRSLDK-------KGLDLIVITRGGGSNEDLNSFNDRAVIEAVFDAKTPIISAIGHK 234

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
            D TL D  ADL   TPT A    V    +L+  + N+  ++  I+   IK     L  L
Sbjct: 235 IDQTLLDLVADLSLQTPTEAGSYLVKSYSNLERDMKNILDQIKGILNDRIKSYEFDLVKL 294

Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              L   N   TL      L  L ++L+  ++  I    +    +   +K    I  I K
Sbjct: 295 KLELDKYNPSFTLKEKMRELLYLKKDLDLKIQANITYNEQKIKLLYKDLKRFEDIIEISK 354

Query: 369 NRQHILEKQQHI 380
              HI + +Q I
Sbjct: 355 KNIHIKDIKQEI 366



 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 14/36 (38%)

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           I+D     I     L  K +  I F DG     VI+
Sbjct: 359 IKDIKQEIIFSAHQLKVKDKAYIEFSDGIVKVEVID 394


>gi|329963137|ref|ZP_08300917.1| Exonuclease VII, large subunit [Bacteroides fluxus YIT 12057]
 gi|328529178|gb|EGF56108.1| Exonuclease VII, large subunit [Bacteroides fluxus YIT 12057]
          Length = 416

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ +L+  ++  +E  L     V+ E+S  R  ++ GH Y  F  KD       ++   
Sbjct: 6   LSLYDLNALVRRSIEQCLPDEFWVQAELSDVRTGNT-GHCYLEFVQKDPRGNNLIAKARG 64

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            +W      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 65  TVWANVFRLLKPYFEEATGQAFVAGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 123

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L EEG+ +   +  +P +P+ IAVI+SPT A   D   ++      F    
Sbjct: 124 RRRREILKQLEEEGVLTLNKELEMPRLPQRIAVISSPTAAGYGDFCHQLQNNPRGFCFYT 183

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + + +A+ ++N        P  D +++ RGGG+  DL  F+  ++  
Sbjct: 184 ELFPALMQGDRVEESVLSALDKINARL-----PEFDAVVIIRGGGATSDLSGFDTYLLAA 238

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE  +    +    L  L ARL  
Sbjct: 239 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIDSMNNAADELEMLAARLQE 298

Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   +  +   L +    +P++  + +S ++  L    +++   +   + R       +
Sbjct: 299 SVRTRLLQEQRKLAAYRDRIPSAAYRRISAAKLALLTARKDMAQVVTSSLSRHRHRLELL 358

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 359 QQRLADVSPEKQLAR 373



 Score = 92.9 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
           FLI ++      +      +++ V+     +  E+++  A    +      RI      +
Sbjct: 277 FLIDSMNNAADELEMLAARLQESVRTR---LLQEQRKLAAYRDRIPSAAYRRISAAKLAL 333

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +++  +      + +  + L   + +  L RGY+     +   +     L 
Sbjct: 334 LTARKDMAQVVTSSLSRHRHRLELLQQRLADVSPEKQLARGYSITL-KDGKVVKDAGLLR 392

Query: 481 TKTRILINFFDGQANAIV 498
               I      G+A +I+
Sbjct: 393 EGDEITTRLHKGEATSII 410


>gi|328479788|gb|EGF48905.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus
           MTCC 5462]
          Length = 176

 Score =  183 bits (464), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 78/181 (43%), Positives = 123/181 (67%), Gaps = 8/181 (4%)

Query: 51  GHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
           G+ YFSLKD+H++I A++++   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P
Sbjct: 2   GNQYFSLKDDHAKIGALMFRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEP 61

Query: 111 SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170
            G G L  A E+ KKKL  EGLF   H+ P+P  PK +AV+TSP+GAVI+DI+  ++ R+
Sbjct: 62  DGVGALYQAFEQLKKKLAAEGLFER-HQRPLPLFPKRVAVVTSPSGAVIQDIITTVARRY 120

Query: 171 PL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           P+ ++ +FP  VQGD+    I   + ++ T+         D +I+ RGGGSIEDLW FN+
Sbjct: 121 PILQLTLFPAIVQGDQAADSIVKQLNRIETMS------GFDAVIIGRGGGSIEDLWPFNE 174

Query: 230 E 230
           E
Sbjct: 175 E 175


>gi|255326921|ref|ZP_05367997.1| exodeoxyribonuclease VII, large subunit [Rothia mucilaginosa ATCC
           25296]
 gi|255296138|gb|EET75479.1| exodeoxyribonuclease VII, large subunit [Rothia mucilaginosa ATCC
           25296]
          Length = 433

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + ++ L+ +LK+ V+     + V  +++   G    G+ +  LKD   
Sbjct: 26  PGKSQETTATNPWPLALLAQNLKNYVDKV-PELWVEAQVASLNGR--GGNVFMELKDLNE 82

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
                  ++    + +      G   +   K + +  + K  +I + +   G+G L   L
Sbjct: 83  DFSFTLALFGRAGSGLAADVTVGARIVTRAKPSLW-KNGKLSLIGKEVYAVGTGNLHEQL 141

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++ ++ L  EGLFSD  K P+P +P  + +IT       +D+++  S R+P +   +   
Sbjct: 142 QRLREALAAEGLFSDARKKPLPMLPNRVGLITGRDSDAEKDVIRNASLRWPGVVFEVRNT 201

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+            +  L E    P  D+I++ARGGGS EDL  F++E ++RA+A +
Sbjct: 202 RVQGEGAAA------EVIAALAELDAHPEVDVIVIARGGGSFEDLLPFSEEALIRAVAAA 255

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           + P++SAIGHE D  + D  ADLRA TPT A +  VP      + +    ARL+  ++  
Sbjct: 256 TTPVVSAIGHEADSPILDAVADLRASTPTDAGKRIVPDISEETARITEARARLDRAVLGY 315

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  ++N +  L     L + + +L      L +L      +++  + R+    +H + R+
Sbjct: 316 VGMQMNYIAQLRSRPVLTHPESSLLMRVEELSQLRERAHRSVQHRLERESATLSHTLARV 375

Query: 358 KSDFLIHNIQK 368
           +S      + +
Sbjct: 376 RSLSPAQTLNR 386



 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +    I E +  +++ V  ++        +  +    +    ++ +      + +L  
Sbjct: 294 ISEETARITEARARLDRAVLGYVGMQMNYIAQLRSR--PVLTHPESSLLMRVEELSQLRE 351

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R    + H+++    ++S T   ++S +   TL RGY+ +QD     +     L+   +I
Sbjct: 352 RAHRSVQHRLERESATLSHTLARVRSLSPAQTLNRGYSIVQDAAGAIVRDASALSKGEQI 411

Query: 486 LINFFDGQANAIVINKAPP 504
            +    G A A V +  P 
Sbjct: 412 TVRAATGSAQATVTSTDPS 430


>gi|283457632|ref|YP_003362216.1| exonuclease VII, large subunit [Rothia mucilaginosa DY-18]
 gi|283133631|dbj|BAI64396.1| exonuclease VII, large subunit [Rothia mucilaginosa DY-18]
          Length = 447

 Score =  183 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 15/371 (4%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P   + +     + ++ L+ +LK+ V+     + V  +++   G    G+ +  LKD   
Sbjct: 40  PGKSQETTATNPWPLALLAQNLKNYVDKV-PELWVEAQVASLNGR--GGNVFMELKDLNE 96

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
                  ++    + +      G   +   K + +  + K  +I + +   G+G L   L
Sbjct: 97  DFSFTLALFGRAGSGLAADVTVGARIVTRAKPSLW-KNGKLSLIGKEVYAVGTGNLHEQL 155

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           ++ ++ L  EGLFSD  K P+P +P  + +IT       +D+++  S R+P +   +   
Sbjct: 156 QRLREALAAEGLFSDARKKPLPMLPNRVGLITGRDSDAEKDVIRNASLRWPGVVFEVRNT 215

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
           +VQG+            +  L E    P  D+I++ARGGGS EDL  F++E ++RA+A +
Sbjct: 216 RVQGEGAAA------EVIAALAELDAHPEVDVIVIARGGGSFEDLLPFSEEALIRAVAAA 269

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
           + P++SAIGHE D  + D  ADLRA TPT A +  VP      + +    ARL+  ++  
Sbjct: 270 TTPVVSAIGHEADSPILDAVADLRASTPTDAGKRIVPDISEETARITEARARLDRAVLGY 329

Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           +  ++N +  L     L + + +L      L +L      +++  + R+    +H + R+
Sbjct: 330 VGMQMNYIAQLRSRPVLTHPESSLLMRVEELSQLRERAHRSVQHRLERESATLSHTLARV 389

Query: 358 KSDFLIHNIQK 368
           +S      + +
Sbjct: 390 RSLSPAQTLNR 400



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           I +    I E +  +++ V  ++        +  +    +    ++ +      + +L  
Sbjct: 308 ISEETARITEARARLDRAVLGYVGMQMNYIAQLRSR--PVLTHPESSLLMRVEELSQLRE 365

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R    + H+++    ++S T   ++S +   TL RGY+ +QD     +     L+   +I
Sbjct: 366 RAHRSVQHRLERESATLSHTLARVRSLSPAQTLNRGYSIVQDAAGAIVRDASALSEGEQI 425

Query: 486 LINFFDGQANAIVINKAPP 504
            +    G A A V +  P 
Sbjct: 426 TVRAATGSAQATVTSTDPS 444


>gi|257066524|ref|YP_003152780.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii DSM
           20548]
 gi|256798404|gb|ACV29059.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii DSM
           20548]
          Length = 394

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 167/366 (45%), Gaps = 14/366 (3%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV + + + K  ++ +    ++ + G++S  R  +S  H YFSLK++   ID +I+   
Sbjct: 5   LSVKQFNEYFKSNIKHDPIFQNLYINGQLSNVRINNS--HLYFSLKEDRDIIDCVIYYYE 62

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              I+F  E G + LV G +     SS+  I +  +   G         + K+   ++G 
Sbjct: 63  DKDIDFSVEIGKDVLVKGTVIFNNYSSRIVISVNEIKEKGLSQKYIEFLQMKEDFRKKGY 122

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191
           F  + K  IP  P+ I +ITS   A I D L  I+ +   + + + PVKVQG+  P  + 
Sbjct: 123 FDLEKKKEIPKFPQKIGLITSNESAAIVDFLSVINQKPNDMHIYLCPVKVQGESSPLMVK 182

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI  L+           D+I++ RGGGS EDL  FND +++ A   +  PIISAIGH+ 
Sbjct: 183 KAIETLDGR-------NLDLIVITRGGGSSEDLSSFNDRLVIEASFLAKTPIISAIGHKI 235

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D TL D  ADL   TPT A    +    ++   + N   ++  I +  I+     L    
Sbjct: 236 DQTLLDLVADLSLQTPTEAGSYVIKNYSNISKEMKNTIDKMGEITLSRIRDYEYKLLKTR 295

Query: 312 KALPNSDQT--LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           K L        +      L  L ++L+  L+  +    +    I + +K    I  I KN
Sbjct: 296 KKLERQSPLREIDKKINSLTYLKKDLDIKLKSNLSYNEQRLRLISSELKRFNDIIEIGKN 355

Query: 370 RQHILE 375
             HI +
Sbjct: 356 NIHIKD 361



 Score = 44.0 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 12/118 (10%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R    E K       + R+     I      +  L   ++  L   +      + + +  
Sbjct: 283 RIRDYEYKLLKTRKKLERQSPLREIDKKINSLTYLKKDLDIKLKSNLSYNEQRLRLISSE 342

Query: 449 LQSFAYKNTLKRGYTS------IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           L+ F   + ++           I+D   N +  K +L       I F DG+    V++
Sbjct: 343 LKRFN--DIIE----IGKNNIHIKDNMGNIVFSKHSLKKSDIAFIEFSDGKVKVEVVD 394


>gi|298253447|ref|ZP_06977239.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis 5-1]
 gi|297532842|gb|EFH71728.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis 5-1]
          Length = 357

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 87/301 (28%), Positives = 141/301 (46%), Gaps = 9/301 (2%)

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
               +      +G   +V GK   +  +++   + + +   G+G L   +++ +KKL  E
Sbjct: 4   SNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQIDELRKKLKGE 63

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189
           GLF  ++K P+P  PK I ++ +P      D++  ++ R+P+ R  +    VQG +CP +
Sbjct: 64  GLFDAENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHAHVQGVQCPSD 123

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           I  AI QL+        P  D+II+ARGGGS EDL  F+DE +VRA A  + PI+SAIGH
Sbjct: 124 IIAAIEQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAACATPIVSAIGH 177

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E DWTL D AAD+RA TPT AA+  VP        + N    +   I   +  +I  +  
Sbjct: 178 EDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISARVDNEIRLVEG 237

Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                 L      L      +++    + H L  ++             + +      + 
Sbjct: 238 YANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQSTLN 297

Query: 368 K 368
           +
Sbjct: 298 R 298



 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 17/182 (9%), Positives = 52/182 (28%), Gaps = 7/182 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E+ Q I+  ++  +R     + +    L 
Sbjct: 177 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 235

Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                     +    +      +++ + R+   L   +     +V      L + + ++T
Sbjct: 236 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 295

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
           L RGY  +Q +    +           + +    G     V        +         +
Sbjct: 296 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSAVTKSAFIKPSKKS 355

Query: 518 KR 519
            +
Sbjct: 356 SK 357


>gi|258645387|ref|ZP_05732856.1| exodeoxyribonuclease VII, large subunit [Dialister invisus DSM
           15470]
 gi|260402737|gb|EEW96284.1| exodeoxyribonuclease VII, large subunit [Dialister invisus DSM
           15470]
          Length = 369

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 9/347 (2%)

Query: 13  PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             YSV E S  +   ++ +    ++ + G +S     H SG  +FSL D  SRI   I K
Sbjct: 2   KVYSVRECSSLVAGALQKDYIFKNITISGTVSNL-HFHFSGVIFFSLIDEESRITCRIGK 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130
                +    + G E L++G I     S +    ++ ++ S    +L  L+  KK+L   
Sbjct: 61  MRSAFLGRRIKNGTEILILGNIKYDKISGRPIFQVDRILSSTESPILEKLDMLKKELKAS 120

Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189
           G F  + K  +P  P  + ++TS +GAVI DI++    R   +R  ++   VQG+    +
Sbjct: 121 GYFDIEKKKRLPLFPFRVGIVTSASGAVIHDIIRTGFLRNNSVRYSLYSTTVQGENAAAD 180

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A  +++ N   E      PDI+I+ARGGG+ EDL  FN  +++ A+  S IP+ISA+GH
Sbjct: 181 MAEMVIRANEETE-----PPDILIIARGGGAEEDLTPFNQRVLLDAVFCSKIPVISAVGH 235

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD TL D AAD+RA TPT AAE+AVP K++++  +I L   L  II   +      L  
Sbjct: 236 ETDVTLLDLAADVRASTPTQAAEIAVPDKKYIEERIICLYLVLQKIIRDKLNISKLKLQH 295

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            L       Q+   +  R D L   +  + ++      +  + +   
Sbjct: 296 TLTIFNILAQSGKVTAVRKDILYNWIILDRKLKKVISNKKLDILERM 342


>gi|55380109|ref|YP_137958.1| exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC
           43049]
 gi|55232834|gb|AAV48252.1| probable exodeoxyribonuclease VII large subunit [Haloarcula
           marismortui ATCC 43049]
          Length = 403

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 147/359 (40%), Gaps = 19/359 (5%)

Query: 17  VSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V  L+  +  +VE    L+   V G++S Y G+ S+ H +  L    S I  +++    +
Sbjct: 27  VDTLNEDIGAVVESADQLAFDYVVGDVSDY-GVSSNDHVHLDLVHEGSTIHCVLFGYKRS 85

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
            I+   E+G++  V G ++ +       +I+E ++  G GT     E+ ++ L  +GL  
Sbjct: 86  AIDATIEDGMQVAVKGSLSYYEDGGNVSVIVEDIVEVGEGTYQRIYEQNRQLLDSDGLLD 145

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
            +HK  +P  P+ I + TS T     D +  I  R+P + ++I    VQGD+    I  A
Sbjct: 146 PEHKQALPDFPERIGIATSATSDARMDAITSIHERYPDVDIVIQNTSVQGDDAMMSIMGA 205

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I       E    PR D+I+L RGGGS + L  FN+  + R I  +  P++  +GHE D 
Sbjct: 206 IS------ELDDDPRVDVIVLTRGGGSDKHLRVFNETPLCRVIHKTETPVVVGVGHENDR 259

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLAD  AD R  TPT A  +               E                  + L +A
Sbjct: 260 TLADEVADRRVMTPTEAGNIVPERTTLEAELETLEERLNTAYTETAETTLETMDDRLTRA 319

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                      R     L                     + NR++     ++ Q+ R+ 
Sbjct: 320 YR---------RTVESDLSAFEAELDRTYDTHVRDELTDLANRLEQARTQYDQQREREQ 369


>gi|325067257|ref|ZP_08125930.1| exodeoxyribonuclease VII large subunit [Actinomyces oris K20]
          Length = 232

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 13/232 (5%)

Query: 31  NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIWKGTL----NKIEFLPEEGI 84
            +S V V G++        +G A+ +L+D  +   +   I+   L     +      EG 
Sbjct: 7   RMSQVWVEGQVIQLNRRPGAGMAFLTLRDTDADISMSVSIYARVLDAVLARTGAELGEGA 66

Query: 85  EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144
             +V  K T +      Q+  + + P G G LL  +E+ ++ L  EGLF  + K P+PF+
Sbjct: 67  RVVVRAKPTFWAKRGSLQLQADDIRPVGVGDLLARIEQLRRILAAEGLFDAERKRPLPFL 126

Query: 145 PKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEG 203
           P+ + ++         D+L     R+P L   +  V VQG     E+  A+       E 
Sbjct: 127 PRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAVQGARAVGEVTRAVQ------EL 180

Query: 204 RTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255
               + D+I++ARGGG++EDL  F+DE +VRA A    P++SAIGHETD  L
Sbjct: 181 DADAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRTPLVSAIGHETDCPL 232


>gi|167752371|ref|ZP_02424498.1| hypothetical protein ALIPUT_00615 [Alistipes putredinis DSM 17216]
 gi|167660612|gb|EDS04742.1| hypothetical protein ALIPUT_00615 [Alistipes putredinis DSM 17216]
          Length = 408

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/369 (21%), Positives = 148/369 (40%), Gaps = 26/369 (7%)

Query: 15  YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDA 66
            ++S+L   +K  ++   +  V V  EI+  +  + SGH Y  L +         S+  A
Sbjct: 5   LTLSQLQKLVKATLDEAFALPVWVSAEIAEIKINY-SGHCYLELVEKGGDNGVPLSQARA 63

Query: 67  IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
           +IW+    +I              GI  L    I+ +     + + I  + P+   G + 
Sbjct: 64  VIWRTAYARIAGYFEAETGQRLAAGIRILARVMIS-YHELYGFSLNILDIDPTFTLGDME 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVII 176
              +   ++L  EG++    +NP+P + + IA+++S   A  +D  + +    +   + +
Sbjct: 123 RQRQITIERLQREGVWDINRENPLPQVVQRIAIVSSRQAAGYQDFCKELGKSPYAFSLTL 182

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           F   +QG      I  A+  +    +       D ++L RGGGS  DL  FN   +   I
Sbjct: 183 FDAFMQGAGAEDSIVAALDAVADRMDD-----FDAVVLIRGGGSASDLNCFNAYRLCAHI 237

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A   +PI++ IGH+ D ++AD  A     TPT  A   V     ++  L     +L +  
Sbjct: 238 AQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTGVEGWLDTAALQLRDAS 297

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + +     L  L   + +    L   R  +L R   EL   +  ++ R++        
Sbjct: 298 AGIFRRHELRLAELGSEIAHQSALLLLRRNEQLSRWSDELSTAVGELLRRQHTRLTTAEE 357

Query: 356 RIKSDFLIH 364
            I S    H
Sbjct: 358 LIASRSPEH 366



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 61/184 (33%), Gaps = 4/184 (2%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N+ +  +        +   + H+ +  +     H         + +L+  +      +  
Sbjct: 229 NAYRLCAHIAQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTGVEGWLDT 288

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
               +        R   L   E  + +     Q+   +   +  + +    +   +   +
Sbjct: 289 AALQLRDASAGIFRRHELRLAELGSEIA---HQSALLLLRRNEQLSRWSDELSTAVGELL 345

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           +  HT ++    ++ S + ++ L  G+  +   +   +T  + L++   + +   DG  +
Sbjct: 346 RRQHTRLTTAEELIASRSPEHILSLGFAIVHRGD-ETVTSAKGLSSGDTLRVELSDGTFD 404

Query: 496 AIVI 499
           A V 
Sbjct: 405 ATVK 408


>gi|302345557|ref|YP_003813910.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica
           ATCC 25845]
 gi|302150183|gb|ADK96445.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica
           ATCC 25845]
          Length = 434

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 162/393 (41%), Gaps = 30/393 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SR 63
               S+ EL+  +  ++++ LS    V  E+S      + GH Y  L + +       +R
Sbjct: 2   TKALSLFELNSLVADVIDATLSRSYWVEAELSE--ARENRGHCYMELIEKNEGSNVPIAR 59

Query: 64  IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114
             A  W      I+             G++ ++      F     +  I++ + P    G
Sbjct: 60  ASAKCWSNIWTLIKPAFIRITGQEIRAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEYTMG 118

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP--- 171
            ++   ++  ++L  EG+F  Q +  +P   + IAVI+S T A   D   ++        
Sbjct: 119 DMMRKRQEIIRQLKAEGVFDLQKELCLPMFAQRIAVISSETAAGYGDFCNQLETNDYGLY 178

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             V +FP  +QGD   + I NA+ Q+N+ +E       D +++ RGGG+  DL  F+   
Sbjct: 179 FHVELFPAIMQGDSVEQSIINALNQINSREED-----FDCVVIIRGGGATADLSGFDTLN 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   +AN  +PII+ IGHE D ++ D  +  R  TPT AA   +         + N +A 
Sbjct: 234 LAENVANFPLPIITGIGHERDESILDMVSFQRMKTPTAAAAYLIDHIASTLMRVENAQAA 293

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR-LPRELEHNLEIIIFRKYRHF 350
           + + + + ++ +   +  +   +P     +   +      L + L   +   I +   + 
Sbjct: 294 IIDGVKKALEVEKMRIQHIGSHIPVLFSVVRTKQDAWLEGLSQRLVMRMNEAIKQAEFYL 353

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
           + + N +    L + +   +  +   +Q    +
Sbjct: 354 STLQNCMLL-TLQNKLSVEQHRLDILEQRARLL 385



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 7/174 (4%)

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKS--DFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           L       ++          +HI + +    +     I   ++ +  ++  I+ I     
Sbjct: 258 LDMVSFQRMKTPTAAAAYLIDHIASTLMRVENAQAAIIDGVKKALEVEKMRIQHIGSHIP 317

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL----SHKIKSCHTSVSI 444
               + + ++ A L  L ++   R+       +  ++ ++  +     +K+      + I
Sbjct: 318 VLFSVVRTKQDAWLEGLSQRLVMRMNEAIKQAEFYLSTLQNCMLLTLQNKLSVEQHRLDI 377

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
             +  +       LKRGY+     N   I   ++L     I   F  G+  + V
Sbjct: 378 LEQRARLLDPSLLLKRGYSITL-CNGRTIRNAKDLKIGDTITTRFETGEVESKV 430


>gi|289706734|ref|ZP_06503078.1| exodeoxyribonuclease VII, large subunit [Micrococcus luteus SK58]
 gi|289556534|gb|EFD49881.1| exodeoxyribonuclease VII, large subunit [Micrococcus luteus SK58]
          Length = 437

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 15/382 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60
           P     +     + +  LS +LK  +E       + G++  ++     G+ Y +++D   
Sbjct: 20  PARAGETSAERPWPLRRLSENLKAHIERA-PATWIEGQLIEFKNNR--GNVYMTMRDLEE 76

Query: 61  HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
              +    W+     ++   ++G   +   K   +  + +  + ++ + P G G LL  +
Sbjct: 77  EVSLPLTAWRNVAMTLDGTVQQGSRVVARVKPNFWLKAGRLSMNVQEMRPVGLGDLLARV 136

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E  ++ L EEGL S  HK P+P +P  I +IT       +D+L+    R+P     I  V
Sbjct: 137 ELLRRALAEEGLTSPAHKRPLPLLPHRIGLITGRDSDAKKDVLRNTLLRWPAAEFEIREV 196

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW-HFNDEMIVRAIAN 238
            VQG E P+++A A+ +          P  D+I++ARGGG++E++   F+DE +VRA+A 
Sbjct: 197 AVQGAEAPRQVAAALAE------LDADPAVDVIVIARGGGALEEVVLPFSDEALVRAVAA 250

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
           +  P++SAIGHE D  + D  ADLRA TPT AA+  VP      + L +   RL   + R
Sbjct: 251 ARTPVVSAIGHEADRPVLDDVADLRASTPTDAAKRIVPDAAQEAAGLADARLRLAAAVER 310

Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            ++ +   L +L     L      +   +   DR        L   + R+      +  R
Sbjct: 311 RVRAEAEGLAALRSRPVLARPHVMVDTRQEETDRWRERGRSALGHRLVREEDAVTQLRAR 370

Query: 357 IKSDFLIHNIQKNRQHILEKQQ 378
           +++      + +    +    Q
Sbjct: 371 VRALSPQRTLDRGYAVVQHAGQ 392



 Score = 90.2 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 1/118 (0%)

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                 +  +    +        +   R    L H++     +V+     +++ + + TL
Sbjct: 321 ALRSRPVLARPHVMVDTRQEETDRWRERGRSALGHRLVREEDAVTQLRARVRALSPQRTL 380

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516
            RGY  +Q      +     +AT  R+ I    G+  A V+        P  +     
Sbjct: 381 DRGYAVVQHA-GQVVRDADQVATDDRLDILVAAGRIAADVVATHRTTPTPPHERTRQA 437


>gi|311747947|ref|ZP_07721732.1| exodeoxyribonuclease VII, large subunit [Algoriphagus sp. PR1]
 gi|126574920|gb|EAZ79278.1| exodeoxyribonuclease VII, large subunit [Algoriphagus sp. PR1]
          Length = 436

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/506 (18%), Positives = 183/506 (36%), Gaps = 96/506 (18%)

Query: 16  SVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH-----SRIDAIIW 69
           S+SEL+  ++ +++S L  V  V GE+S +R     GHAYF L + +     ++I A +W
Sbjct: 6   SISELNQLIQQVLDSELDPVYWVIGELSDFRLSPQ-GHAYFELVEKNGNKIQAKIRANLW 64

Query: 70  KGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTAL 120
           + T   +            + G++ L    I  F       + ++ + PS   G      
Sbjct: 65  QFTYRNVATRFESSTGTSLKNGMKVLAQVAIN-FHPLYGLSVNVKDIDPSFSLGERARVR 123

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIF 177
           ++   +L  EG+     + PIP + + I +I+S T A   D + +I      + +   +F
Sbjct: 124 QETIDRLTREGMLQLNSQLPIPGVIQKIGIISSATAAGYGDFINQIESNSGGYKIYHKLF 183

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P  +QG++  K +  AI         +     + I++ RGGG+  DL  F++  +   IA
Sbjct: 184 PSLMQGNDAVKNLIQAIDSAEK---SKDLLGLESIVIIRGGGAQLDLDCFDEYELAVKIA 240

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
             S+P+ + IGHE D T+AD  A  +  TPT  AE  +                      
Sbjct: 241 KCSLPVFTGIGHERDDTIADMVAHTKLKTPTAVAEFLLSG-------------------- 280

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
                                        RL    R +E   ++ I  +         R+
Sbjct: 281 -----------------------FREFEERLTLASRRMERATKLKIHEQSTIIQQFSQRL 317

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +S      IQ++     +    + +I       + L++ +   +   +R+ T   +    
Sbjct: 318 QSYSRNRLIQEH----DKLNSWLLRINTSSKNMLELQQLKLENLEKGIRQNTTRILTKET 373

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
             ++     ++                          K+ L +GYT  + +    I    
Sbjct: 374 EKLENKSHWLKQ----------------------LDPKSILAKGYTRTEIS-GTPIH-LT 409

Query: 478 NLATKTRILIN-FFDGQANAIVINKA 502
                  +  +   + + N+ +    
Sbjct: 410 KAKVGDEMTTHTLAE-KINSTITQIE 434


>gi|288803517|ref|ZP_06408948.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica
           D18]
 gi|288333940|gb|EFC72384.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica
           D18]
          Length = 434

 Score =  181 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 160/393 (40%), Gaps = 30/393 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SR 63
               S+ EL+  +  ++++ LS    V  E+S      + GH Y  L + +       +R
Sbjct: 2   TKALSLFELNSLVADVIDATLSRSYWVEAELSE--ARENRGHCYMELIEKNEGSNVPIAR 59

Query: 64  IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114
             A  W      I+             G++ ++      F     +  I++ + P    G
Sbjct: 60  ASAKCWSNIWTLIKPAFVRITGQEIRAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEYTMG 118

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171
            ++   ++  ++L  EG+F  Q +  +P   + IAVI+S T A   D   ++        
Sbjct: 119 DMMRKRQEIIRQLKAEGVFDLQKELCLPMFAQRIAVISSETAAGYGDFCNQLETNEYGLY 178

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             V +FP  +QGD   + I NA+ Q+N+ +E       D +++ RGGG+  DL  F+   
Sbjct: 179 FHVELFPAIMQGDSVEQSIINALNQINSREED-----FDCVVIIRGGGATADLSGFDTLN 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   +AN  +PII+ IGHE D ++ D  +  R  TPT  A   +         + N +  
Sbjct: 234 LAENVANFPLPIITGIGHERDESILDMVSFQRVKTPTAVAAYLIDYLASTLMRVENAQVA 293

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR-LPRELEHNLEIIIFRKYRHF 350
           + + + + ++ +   +  +   +P     +   +      L + L   +   I +   H 
Sbjct: 294 IVDGVKKALEVEKMRIQHIGSHIPVLFSVVRTKQEAWLEGLSQRLVMRMNETIKQADFHV 353

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
           + + NR+    L + +      +   +Q    +
Sbjct: 354 STLQNRLLP-TLQNKLSSEHHRLDILEQRARLL 385



 Score = 88.3 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 4/134 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  +  I     HI  +            +     L M   +T   I     H+  L 
Sbjct: 301 ALEVEKMRIQHIGSHIPVLFSVVRTKQEAWLEGLSQRLVMRMNET---IKQADFHVSTLQ 357

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   L +K+ S H  + I  +  +       LKRGY+     N   I   ++L     
Sbjct: 358 NRLLPTLQNKLSSEHHRLDILEQRARLLDPSLLLKRGYSITL-CNGKTIRNAKDLKIGDT 416

Query: 485 ILINFFDGQANAIV 498
           I   F  G+  + V
Sbjct: 417 ITTRFEAGEVESKV 430


>gi|189463746|ref|ZP_03012531.1| hypothetical protein BACINT_00079 [Bacteroides intestinalis DSM
           17393]
 gi|189438696|gb|EDV07681.1| hypothetical protein BACINT_00079 [Bacteroides intestinalis DSM
           17393]
          Length = 414

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            S+ +L+  ++  +E  L     V+ E+S  R   S+GH Y     KD       ++   
Sbjct: 7   LSLYDLNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFIQKDPRSNNLIAKARG 65

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 66  TIWANVYRLLKPYFEESTGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 124

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L EEG+ +   +  +P +P+ IAV++SPT A   D   ++      F    
Sbjct: 125 RRRREILKQLEEEGVLTLNKELEMPVLPQRIAVVSSPTAAGYGDFCHQLKNNSRGFFFHT 184

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + + +A+  +   +E       D +++ RGGG+  DL  F+  ++  
Sbjct: 185 ELFPALMQGDRVEESVLSALDAILNRQED-----FDAVVIIRGGGATSDLSGFDTYLLAA 239

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE  +   +     L  L ++L+ 
Sbjct: 240 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEYLINCMDLAADELEVLISQLHE 299

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   +  +   L S    +P++  + +S ++  L    +++   ++ ++ R+      +
Sbjct: 300 SVRSRLTEEHRKLISYRNRIPSAVVRRVSDAKLALLTTRKDISLAVQTLLSRQRHRLELL 359

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 360 QQRLADASPEKMLAR 374



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 1/127 (0%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E +  I Q+ +     +  E ++ I+  + +      R+      +      I   +  
Sbjct: 288 DELEVLISQLHESVRSRLTEEHRKLISYRNRIPSAVVRRVSDAKLALLTTRKDISLAVQT 347

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +      + +  + L   + +  L RGY+     +   +     L     I+   + G+
Sbjct: 348 LLSRQRHRLELLQQRLADASPEKMLARGYSITL-KDGKVVKNGDVLQLNDEIVTRLYQGE 406

Query: 494 ANAIVIN 500
             +IV +
Sbjct: 407 IVSIVTD 413


>gi|224025626|ref|ZP_03643992.1| hypothetical protein BACCOPRO_02366 [Bacteroides coprophilus DSM
           18228]
 gi|224018862|gb|EEF76860.1| hypothetical protein BACCOPRO_02366 [Bacteroides coprophilus DSM
           18228]
          Length = 436

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 88/435 (20%), Positives = 170/435 (39%), Gaps = 28/435 (6%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  + + L     V+ E+S  R  + SGH Y  F  KD       ++   
Sbjct: 6   LSLVELNGLVRQSIRTCLPDEYWVQAELSDVRANY-SGHCYLEFVQKDPKSNALLAKARG 64

Query: 67  IIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           IIW     ++   F  E G       + LV   +        Y + +  + P+   G + 
Sbjct: 65  IIWSNVYMRLRPYFERETGQAFVSGIKVLVKVTVDFHELYG-YSLTVVDIDPTYTLGDMA 123

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L  EG+ +   +   P++ + IAVI+S T A   D   ++      F   V
Sbjct: 124 RRRREILKRLEGEGVLTLNKELDFPYLTQRIAVISSATAAGYGDFCNQLFHNAWGFVFYV 183

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD+  + I  A+ Q+            D +++ RGGG+  DL  F+   +  
Sbjct: 184 RLFPAIMQGDKVEETIIRALEQIYQ-----EIDHWDAVVIIRGGGATSDLSGFDTYELAA 238

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
             A   +P+I+ IGHE D T+ D  +  R  TPT AAE  +     +   L +   ++  
Sbjct: 239 HCAQFPLPVITGIGHERDDTVLDMVSHTRVKTPTAAAEFLISRMREVAEELESYREQIRQ 298

Query: 295 IIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L+  +  +P      L   ++R + L R ++   +  +  +       
Sbjct: 299 GVPERLEREKERLDRWVTRIPGKVLMRLQAEQFRQENLARRMQMAWQTRLVHEQYRLQLS 358

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
               ++       +++R  +LE+Q           +   +  K   A+      Q  + +
Sbjct: 359 QRLTQAVTARLQKEEHRLELLEQQVKAASPEVLLKKGYSITLKNGKAVTDASELQPGDEV 418

Query: 414 FYLHTHIKKLITRIE 428
                        ++
Sbjct: 419 QTRLAKGTVNSRILK 433



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 57/164 (34%), Gaps = 6/164 (3%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L   +            +I+       +++ ++ +      I   V   L+     ++  
Sbjct: 278 LISRMREVAEELESYREQIRQGVP-ERLEREKERLDRWVTRIPGKVLMRLQAEQFRQENL 336

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              + M  +    R+ +    ++ L  R+   ++ +++     + +  + +++ + +  L
Sbjct: 337 ARRMQMAWQ---TRLVHEQYRLQ-LSQRLTQAVTARLQKEEHRLELLEQQVKAASPEVLL 392

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           K+GY+     N   +T    L     +      G  N+ ++   
Sbjct: 393 KKGYSITL-KNGKAVTDASELQPGDEVQTRLAKGTVNSRILKIE 435


>gi|167718408|ref|ZP_02401644.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           DM98]
          Length = 170

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 16  SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75
            VS L+  +  ++E     + V GE+S +    +SGH YFS+KD  +++  ++++G    
Sbjct: 21  PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            EF P EG    V   +T +    + Q+ +E++  +G G L  A  + K +L  EGLF+ 
Sbjct: 80  AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166
           + K   P  P+ I ++TS   A +RD+L  +
Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTL 170


>gi|46201318|ref|ZP_00208058.1| COG1570: Exonuclease VII, large subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 280

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 25/304 (8%)

Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284
             FN+E++VRA A S+IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+  L ++
Sbjct: 1   MAFNEEIVVRAAAQSAIPLISAVGHETDTTLIDFASDLRAPTPTAAAEKAVPVRAELVAT 60

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
           +  + +R+   + R ++ + N L    +ALP+  + +     RLD     L +   +++ 
Sbjct: 61  VAEMGSRMIGAMQRGLEERRNRLGHTFRALPHPRRVMEDCARRLDERAERLHNAPRLLLE 120

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           R+    + +  R++       + +    +      ++  +K          + +      
Sbjct: 121 RRRAELDRLAARLR--HPREQLAEAGHRLAALSTRLDHAMKTVTAAERAANERRSL---- 174

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
                          +++   R+   L   +      V+   ++L+SF+Y+  L+RG+  
Sbjct: 175 --------------QLEQSAARLIQALPRLLDEKAKRVAHAGQLLESFSYRKVLERGFAV 220

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524
           ++D +   +T        T + + F DG+    V   + P        + H       G 
Sbjct: 221 VRDEHGVPVTSVEAAKPGTALAVEFADGKVGVRVEGSSVP-----PAPKPHRKPTTPDGR 275

Query: 525 QGEL 528
           QG L
Sbjct: 276 QGSL 279


>gi|317475695|ref|ZP_07934955.1| exonuclease VII [Bacteroides eggerthii 1_2_48FAA]
 gi|316908151|gb|EFV29845.1| exonuclease VII [Bacteroides eggerthii 1_2_48FAA]
          Length = 413

 Score =  179 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ +L+  ++  +E  L     ++ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 4   LSLYDLNVLVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 63  TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174
              ++  K+L EEG+     +  IP +P+ +AVI+S T A   D   ++           
Sbjct: 122 RRRKEILKQLEEEGVLLLNKELDIPRLPQRVAVISSSTAAGYGDFCHQLKNNPGGFYFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + +  A+ ++N+  E       D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGDRVEESVLAALDKINSRLES-----FDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE  +         L  L  RL  
Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIGCMNDAAEELEMLAGRLYG 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            I  L+  +   L S    +P++  + +S +++ L  + +++       + R +     +
Sbjct: 297 GIRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATSSLSRHHHRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 QQRLTDVSPEKQLAR 371



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 1/130 (0%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E +    ++       +  E ++ ++  + +       I      +  +   I    + 
Sbjct: 285 EELEMLAGRLYGGIRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATS 344

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +   H  + +  + L   + +  L RGY+     N   +    +L     I    + G+
Sbjct: 345 SLSRHHHRLELLQQRLTDVSPEKQLARGYSITL-KNGRIVKNVSSLNEGDEITTRLYQGE 403

Query: 494 ANAIVINKAP 503
             + V NK  
Sbjct: 404 LISTVTNKNT 413


>gi|256545254|ref|ZP_05472619.1| exodeoxyribonuclease 7 large subunit (exodeoxyribonuclease VII
           large subunit) [Anaerococcus vaginalis ATCC 51170]
 gi|256399081|gb|EEU12693.1| exodeoxyribonuclease 7 large subunit (exodeoxyribonuclease VII
           large subunit) [Anaerococcus vaginalis ATCC 51170]
          Length = 393

 Score =  179 bits (455), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 15/350 (4%)

Query: 15  YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72
            SV + + ++K   + +    +V V+GEI+ Y+  H+  H YFSLK+ +  ID +++   
Sbjct: 4   LSVKQFNQYIKTSFKHDPLFQNVSVKGEIANYKISHN--HIYFSLKEENEIIDCVVYYYE 61

Query: 73  LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
              I    + G E +V G +      SK  I + ++   G         K K++  ++G 
Sbjct: 62  QKDIG-DYDNGDEVIVDGNLIYNSFFSKISISVNNIEKKGLSEEYLKFLKIKEEFFKKGY 120

Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191
           F    K  I   PK I +ITS   A I D L  I+     + + ++PVKVQG     EI 
Sbjct: 121 FDKDTKKTICDYPKEIGLITSDKSAAIVDFLSVINKEISDINIYLYPVKVQGLSAKDEII 180

Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251
            AI  L+           D I++ RGGGS EDL  FN++ IV  I  +  PIISAIGH+ 
Sbjct: 181 KAINVLDK-------KNLDTIVITRGGGSKEDLKVFNEKDIVEEIYKAKSPIISAIGHKI 233

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
           D +L D  +DL   TPT A    V   + ++  +  +   +   + R I+ K   LN+L 
Sbjct: 234 DLSLTDLVSDLSLQTPTEAGSYLVRNYKKIRQDINKIFVDIQKTLNRNIELKELKLNNLK 293

Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +L   + D+ L      ++ +  ++++NL + I +K +    +  ++ S
Sbjct: 294 YSLDSYSLDKLLDEKTKNINEIFEKIKNNLNLNIEKKEKDLEILKYKLNS 343



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 17/181 (9%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           + + +     +  I  +       +++ +             ++  + +Q I +I     
Sbjct: 216 EEIYKAKSPIISAIGHKIDLSLTDLVSDLSLQTPTEAGSYLVRNYKKIRQDINKIFVDIQ 275

Query: 389 RYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
           + +    + K   L+ L+           +     +I ++  +I+  L+  I+     + 
Sbjct: 276 KTLNRNIELKELKLNNLKYSLDSYSLDKLLDEKTKNINEIFEKIKNNLNLNIEKKEKDLE 335

Query: 444 ITTRILQSFAYKNTLKRGYTS------IQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           I    L S   K+ L            I+D + NFI  K +L  K ++ I F DG+  A 
Sbjct: 336 ILKYKLNSL--KSILD----IKKNSIFIKDFDGNFIYSKYSLKNKDKVNIVFSDGEVKAE 389

Query: 498 V 498
           +
Sbjct: 390 I 390


>gi|327313906|ref|YP_004329343.1| exodeoxyribonuclease VII large subunit [Prevotella denticola F0289]
 gi|326945601|gb|AEA21486.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola
           F0289]
          Length = 454

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 86/391 (21%), Positives = 163/391 (41%), Gaps = 30/391 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63
               ++ EL+  +   +++ L+    V  E+S  R     GH Y  L  KD +     +R
Sbjct: 22  EKALTLYELNCMVADTIDATLARSYWVEAELSEVRENR--GHCYMELIEKDGNGNVPVAR 79

Query: 64  IDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114
             A  W+   + I              G++ ++      F     +  I++ + P    G
Sbjct: 80  ASAKCWRNVWSVIMPYFVRITGQQVHSGMKLMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 138

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171
            ++   ++  ++L EEG+F  Q +  +P     IAVI+S T A   D   ++      F 
Sbjct: 139 DMMRKRQEIVRRLKEEGVFDLQKELRLPMFASRIAVISSETAAGYGDFCNQLETNEYGFK 198

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             + +F   +QG +    I +A+ ++N  +E       D +++ RGGG+  DL  F+   
Sbjct: 199 FHIELFQTVMQGGQVEPGIISALDRINGREEE-----FDAVVIIRGGGATADLSGFDTLE 253

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   +AN  +P+I+ IGHE D ++ D  A LR  TPT AA   +       + + N +  
Sbjct: 254 LAENVANFPLPVITGIGHERDESVLDMVAFLRVKTPTAAASFLIDQLAATLARVENAQRT 313

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350
           L   + R ++ +   L      +P     +   +  RLD L   L   +   + R   H 
Sbjct: 314 LAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFHRLAERMGESLHRSAFHL 373

Query: 351 NHI-INRIKSDFLIHNIQKNRQHILEKQQHI 380
           + +    +    L  +   +R  +L+++  +
Sbjct: 374 DALMQQALPPLHLRLSEASHRLEMLDQRVRL 404



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 350 FNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
            + +   +              R+ +  ++  +            L + ++ A L  L  
Sbjct: 297 IDQLAATLARVENAQRTLAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFH 356

Query: 408 QTKNR----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +   R    +     H+  L+ +    L  ++      + +  + ++       LKRGY+
Sbjct: 357 RLAERMGESLHRSAFHLDALMQQALPPLHLRLSEASHRLEMLDQRVRLLDPSLLLKRGYS 416

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
                N   +     L     I   F +G+  + V +
Sbjct: 417 ITLH-NGRAVRSAGELKVGDVITTRFAEGEIESKVDS 452


>gi|218128480|ref|ZP_03457284.1| hypothetical protein BACEGG_00050 [Bacteroides eggerthii DSM 20697]
 gi|217989371|gb|EEC55684.1| hypothetical protein BACEGG_00050 [Bacteroides eggerthii DSM 20697]
          Length = 416

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ +L+  ++  +E  L     ++ E+S  R   S+GH Y  F  KD       ++   
Sbjct: 7   LSLYDLNVLVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 65

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 66  TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 124

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174
              ++  K+L EEG+     +  IP +P+ +AVI+S T A   D   ++           
Sbjct: 125 RRRKEILKQLEEEGVLLLNKELDIPRLPQRVAVISSSTAAGYGDFCHQLKNNPGGFYFYT 184

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + +  A+ ++N+  E       D++++ RGGG+  DL  F+  ++  
Sbjct: 185 ELFPALMQGDRVEESVLVALDKINSRLES-----FDVVVIIRGGGATSDLSGFDTYLLAA 239

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE  +         L  L  RL  
Sbjct: 240 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIGCMNDAAEELEMLAGRLYG 299

Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +  L+  +   L S    +P++  + +S +++ L  + +++       + R +     +
Sbjct: 300 GVRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATSSLSRHHHRLELL 359

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 360 QQRLTDVSPEKQLAR 374



 Score = 91.0 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 1/130 (0%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E +    ++       +  E ++ ++  + +       I      +  +   I    + 
Sbjct: 288 EELEMLAGRLYGGVRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATS 347

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +   H  + +  + L   + +  L RGY+     N   +    +L     I    + G+
Sbjct: 348 SLSRHHHRLELLQQRLTDVSPEKQLARGYSITL-KNGRIVKNVSSLNEGDEITTRLYQGE 406

Query: 494 ANAIVINKAP 503
             + V NK  
Sbjct: 407 LISTVTNKNT 416


>gi|325859991|ref|ZP_08173118.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola CRIS
           18C-A]
 gi|325482517|gb|EGC85523.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola CRIS
           18C-A]
          Length = 434

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 86/391 (21%), Positives = 163/391 (41%), Gaps = 30/391 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63
               ++ EL+  +   +++ L+    V  E+S  R     GH Y  L  KD +     +R
Sbjct: 2   EKALTLYELNCMVAETIDATLARSYWVEAELSEVRENR--GHCYMELIEKDGNGNVPVAR 59

Query: 64  IDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114
             A  W+   + I              G++ ++      F     +  I++ + P    G
Sbjct: 60  ASAKCWRNVWSVIMPYFVRITGQQVHSGMKLMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 118

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171
            ++   ++  ++L EEG+F  Q +  +P     IAVI+S T A   D   ++      F 
Sbjct: 119 DMMRKRQEIVRRLKEEGVFDLQKELRLPMFASRIAVISSETAAGYGDFCNQLETNEYGFK 178

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
             + +F   +QG +    I +A+ ++N  +E       D +++ RGGG+  DL  F+   
Sbjct: 179 FHIELFQTVMQGGQVEPGIISALDRINGREEE-----FDAVVIIRGGGATADLSGFDTLE 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   +AN  +P+I+ IGHE D ++ D  A LR  TPT AA   +       + + N +  
Sbjct: 234 LAENVANFPLPVITGIGHERDESVLDMVAFLRVKTPTAAASFLIDQLAATLARVENAQRT 293

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350
           L   + R ++ +   L      +P     +   +  RLD L   L   +   + R   H 
Sbjct: 294 LAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFHRLAERMGESLHRSAFHL 353

Query: 351 NHI-INRIKSDFLIHNIQKNRQHILEKQQHI 380
           + +    +    L  +   +R  +L+++  +
Sbjct: 354 DALMQQALPPLHLRLSEASHRLEMLDQRVRL 384



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 350 FNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
            + +   +              R+ +  ++  +            L + ++ A L  L  
Sbjct: 277 IDQLAATLARVENAQRTLAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFH 336

Query: 408 QTKNR----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
           +   R    +     H+  L+ +    L  ++      + +  + ++       LKRGY+
Sbjct: 337 RLAERMGESLHRSAFHLDALMQQALPPLHLRLSEASHRLEMLDQRVRLLDPSLLLKRGYS 396

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
                N   +     L     I   F +G+  + V +
Sbjct: 397 ITLH-NGRAVRSAGELKVGDVITTRFAEGEIESKVDS 432


>gi|299148189|ref|ZP_07041251.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_23]
 gi|298512950|gb|EFI36837.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_23]
          Length = 429

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 91/375 (24%), Positives = 164/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 23  LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 81

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 82  MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 140

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  IP +P+ IAVI+S T A   D   ++     RF    
Sbjct: 141 RRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGYGDFCHQLQHNSGRFFFYT 200

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 201 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 255

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  R+  
Sbjct: 256 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVAEVAEHLEELSMRIQQ 315

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L+  +   L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +
Sbjct: 316 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 375

Query: 354 INRIKSDFLIHNIQK 368
             RI        + +
Sbjct: 376 QQRIADASPDKLLSR 390



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    I+Q        + LE++    +   +      ++      +
Sbjct: 294 LLIHQVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 351 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409

Query: 481 TKTRILINFFDGQANAIV 498
               ++     G+  ++V
Sbjct: 410 PGDHLITRLSKGEVRSVV 427


>gi|237719108|ref|ZP_04549589.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_2_4]
 gi|229451487|gb|EEO57278.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_2_4]
          Length = 414

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 91/375 (24%), Positives = 164/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 8   LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 66

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 67  MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 125

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  IP +P+ IAVI+S T A   D   ++     RF    
Sbjct: 126 RRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGYGDFCHQLQHNSGRFFFYT 185

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 186 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 240

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  R+  
Sbjct: 241 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVAEVAEHLEELSMRIQQ 300

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L+  +   L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +
Sbjct: 301 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 360

Query: 354 INRIKSDFLIHNIQK 368
             RI        + +
Sbjct: 361 QQRIADASPDKLLSR 375



 Score = 90.2 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    I+Q        + LE++    +   +      ++      +
Sbjct: 279 LLIHQVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 335

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 336 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394

Query: 481 TKTRILINFFDGQANAIV 498
               ++     G+  ++V
Sbjct: 395 PGEHLITRLSKGEVRSVV 412


>gi|330998317|ref|ZP_08322142.1| exodeoxyribonuclease VII, large subunit [Paraprevotella xylaniphila
           YIT 11841]
 gi|329568706|gb|EGG50507.1| exodeoxyribonuclease VII, large subunit [Paraprevotella xylaniphila
           YIT 11841]
          Length = 431

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 81/390 (20%), Positives = 161/390 (41%), Gaps = 29/390 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL-------KDNHSRIDA 66
            ++ EL+  ++  +E  L     ++ E+S  R  + +GH Y          +D  ++   
Sbjct: 4   LTLYELNGLVRGTLERTLQAEYWLQAELSEVREAY-NGHCYLEFVQKSVNGRDLVAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           ++W GT   ++ + E         G++ LV   +T       Y + +  + P+   G + 
Sbjct: 63  VVWAGTYRLLKPMFERETGRALSPGLKVLVKVGVTFHELYG-YSLTVADIDPAYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L  +G+ +D  + P+P     IAVI+S T A   D   ++     R    V
Sbjct: 122 RLRREILARLEADGILNDNKELPLPMSANRIAVISSATAAGYGDFCNQLLRNDYRLRFTV 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+     +  A+  +   ++       D +++ RGGG+  DL  F+  ++  
Sbjct: 182 RLFPAVMQGEHVESSVLAALDAVMARQDEW-----DAVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D+ A  R  TPT AA   +  +    S L  +   +  
Sbjct: 237 ACAQFPLPVITGIGHERDDTVIDFVAHTRVKTPTAAAAFLIHHQLEAASRLEAVAREIQQ 296

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
                ++ +   +  L   L  +   +      RL+++   L H     +  ++   +  
Sbjct: 297 QAKGRMEGERLRVERLSARLSAAALQVRTRGERRLEQMAACLFHAGRQRLSDEHHRLDLY 356

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             R+     +  +++ R  +   QQ  E  
Sbjct: 357 AGRLGRGIPV-RMERERFRLQLLQQKCEAA 385



 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 42/134 (31%), Gaps = 4/134 (2%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            ++  R  +      +        +     ++    +   L    + R+   H  +    
Sbjct: 301 RMEGERLRVERLSARLSAAAL---QVRTRGERRLEQMAACLFHAGRQRLSDEHHRLDLYA 357

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   +  +++     + +  +  ++      LKRGY+         + +   L     
Sbjct: 358 GRLGRGIPVRMERERFRLQLLQQKCEAADPVLLLKRGYSMTF-CGGKLVRKASELKGGEE 416

Query: 485 ILINFFDGQANAIV 498
           I     +G+  ++V
Sbjct: 417 ITTRLAEGEIRSVV 430


>gi|260885887|ref|ZP_05736087.2| exodeoxyribonuclease VII, large subunit [Prevotella tannerae ATCC
           51259]
 gi|260851406|gb|EEX71275.1| exodeoxyribonuclease VII, large subunit [Prevotella tannerae ATCC
           51259]
          Length = 434

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 87/501 (17%), Positives = 173/501 (34%), Gaps = 95/501 (18%)

Query: 17  VSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAII 68
           +SEL+  +K  +   L S   +  EI+  R   ++GH Y  L  +D +     ++ +A I
Sbjct: 7   LSELNGLIKETIALTLESSYWIVAEINECRT-AANGHCYLELIERDQNGARLTAKANAHI 65

Query: 69  WKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119
           W      ++           + G+  L+  +I        Y + I  + PS   G ++  
Sbjct: 66  WSNRNQLLQAHFYKVTGRALQAGLSVLIAVEIEFHELYG-YSLNITDIEPSYTIGDVVRR 124

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFP 178
             +   +L  +G+     +  +P      A+I++ T A   D + ++    +P +  +FP
Sbjct: 125 RNEILARLQADGVADLNRELSLPRPAMRFAIISAQTAAGYGDFIHQLEQSGYPFKTQLFP 184

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             +QG++    I  A+ ++          + D +I+ RGGG+  DL  F    +   +A 
Sbjct: 185 AFMQGEKVESSIIAALERIAA-----EQDQWDAVIIIRGGGATSDLGGFETYDLAANVAQ 239

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
             +PI+  IGHE D T+ D  A     TPT  A   + +++   + L +    L     +
Sbjct: 240 FPLPILVGIGHERDETILDLIAFKHFKTPTAVAAYLIDLQQQELALLADFSTALKRYATQ 299

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            + +K   L                      RL +++         R++     + +R+ 
Sbjct: 300 ALSWKKEELT---------------------RLSQKVLAFTTGFSTREHHRLYSLQSRLH 338

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
                         ++ KQQ            +   K+   +       + K+R+     
Sbjct: 339 I-------------LINKQQEAHSAH------LSTIKERLASATQDFLRREKDRMLLYEK 379

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            I+                                    LK G++  +  N   + +   
Sbjct: 380 QIEYAR-----------------------------PDRILKLGFSITR-KNGVIVKRASK 409

Query: 479 LATKTRILINFFDGQANAIVI 499
           L     +      G   +IV 
Sbjct: 410 LQEGDIVETQLNSGSFTSIVK 430


>gi|227485063|ref|ZP_03915379.1| possible exodeoxyribonuclease VII [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236896|gb|EEI86911.1| possible exodeoxyribonuclease VII [Anaerococcus lactolyticus ATCC
           51172]
          Length = 394

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 14/352 (3%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV + + ++K  ++ +     + + GE+   R  +   H YFSLK+ +  ID +I+
Sbjct: 2   RKPLSVKQFNEYIKSNIKHDPIFQRINLIGELCNIRINNY--HLYFSLKEGNDLIDVVIY 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
                +I F    G E ++ G ++    SSK  II+  +   G         K K++   
Sbjct: 60  YYEDKEINFDFSPGKEVIIKGNLSFNNYSSKLVIIVNEVEDVGISKEFLEFLKMKEEFKS 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188
           +G F  ++K PIP + K I +ITS  GA I D L  I+ +   + + + PVKVQGD+   
Sbjct: 120 KGYFDKENKKPIPKLVKKIGLITSKDGAAIMDFLAMINSKANDIHIYLDPVKVQGDDAEV 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            IANAI  L+ L         D+I++ RGGGS EDL  FN   I+ A+  +  PIISAIG
Sbjct: 180 LIANAIRTLDNL-------SLDVIVITRGGGSNEDLSSFNKRKIIEAVFAAKTPIISAIG 232

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR--LIKYKINT 306
           H  D TL DY +DL   TPT      +      +  +IN   +  ++I    ++      
Sbjct: 233 HNIDTTLIDYTSDLSLQTPTEVGSYLISDYVDYEKKIINKFDKAESLIKNTIVMTELKLK 292

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           +        +  +        L  L +E+   ++ +       F ++  ++ 
Sbjct: 293 VLDAKIKKSSPAKLTEDKINALSSLNQEINKAIKNVFSYNENKFKNLAIKLD 344



 Score = 44.7 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 32/117 (27%), Gaps = 13/117 (11%)

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           +  E K K+    + +             +  L   I   + +               L 
Sbjct: 285 VMTELKLKVLDAKIKKSSPAKLTEDKINALSSLNQEINKAIKNVFSYNENKFKNLAIKLD 344

Query: 451 SFAYKNTLKRGYTSIQDT------NNNFITQKRNLATKTRILINFFDGQANAIVINK 501
               +  +      ++        +   +    +L    +I + F DG+  A +IN 
Sbjct: 345 YV--EKLID-----VRKQHFEIKFDEKNVYSSHSLTEGDQIELIFVDGKLKARIING 394


>gi|317503667|ref|ZP_07961684.1| exodeoxyribonuclease VII large subunit [Prevotella salivae DSM
           15606]
 gi|315665188|gb|EFV04838.1| exodeoxyribonuclease VII large subunit [Prevotella salivae DSM
           15606]
          Length = 430

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 162/390 (41%), Gaps = 30/390 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66
            S+ EL+  ++ ++ +   +   V  E+S  R +   GH Y  L  K+       ++  A
Sbjct: 4   LSLFELNNLVREVISTAFDNEYWVEAELSELREVR--GHCYMELIQKELFSNTPVAKASA 61

Query: 67  IIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             WK     +    E         G++ ++            +  I+  + P    G + 
Sbjct: 62  KCWKNKWQTLRPKFEKVSGQYLHAGLKVMLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVI- 175
               +  K+L  EG+F  Q +  +P   + IAVI+S   A   D   +++   + L+   
Sbjct: 121 RKRLEIVKQLQAEGIFDLQKELELPLFAQRIAVISSANAAGYGDFCHQLNDNSYGLKFYT 180

Query: 176 -IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+E  + +  A+ ++N   +       D++++ RGGG+  D+  F+   +  
Sbjct: 181 RLFPAVMQGEEIEQSVIAALNKINQRMDD-----FDVVVIIRGGGATSDMSGFDTLSLSE 235

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +P+I+ IGH+ D ++ D  +  R  TPT AA + V   + +   +++ +  L  
Sbjct: 236 NVANFPLPVITGIGHDRDESVLDMVSHTRVKTPTAAAALLVDHLQEVYERVLDAQTELLT 295

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L + +P             L+   + L   ++  + ++      +
Sbjct: 296 SVRHRMEMEKAQLQHLGEKIPMLFSLYKERQETMLEHRLQALTTAIQTHLVQETHRLEQL 355

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
              IK   +   + +   H+    Q ++ +
Sbjct: 356 KQGIKP-TIEQQMMRENYHLSLLSQRVKSL 384



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 50/139 (35%), Gaps = 4/139 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            + H ++  +  +    + I  +   +        + ++  L    +     +      +
Sbjct: 296 SVRHRMEMEKAQLQHLGEKIPMLFSLYKERQETMLEHRLQALTTAIQ---THLVQETHRL 352

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           ++L   I+  +  ++   +  +S+ ++ ++S      L RGY+     N   +  K  L 
Sbjct: 353 EQLKQGIKPTIEQQMMRENYHLSLLSQRVKSLDPTLLLHRGYSMTML-NGRIVKDKSLLK 411

Query: 481 TKTRILINFFDGQANAIVI 499
           +   I     +G   +I+ 
Sbjct: 412 SGDEIETILENGTILSIIK 430


>gi|134288335|ref|YP_001110498.1| exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis
           G4]
 gi|134132985|gb|ABO59695.1| Exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis
           G4]
          Length = 452

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/524 (15%), Positives = 159/524 (30%), Gaps = 91/524 (17%)

Query: 1   MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59
           M+     N     E S+S     +  +++ +     V  EIS       +GH Y  L + 
Sbjct: 1   MDQTPDTNEEQRGE-SLSFFLKKISTVIQQHADEAWVVAEISSLSSSRGAGHVYLDLVEH 59

Query: 60  -----NHSRIDAIIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIE 106
                  +++ A +W G    +  +F        E G++ L+    T         +I++
Sbjct: 60  DDAGQEIAKVRANMWAGAKQAVLGKFEAETGSKLEAGMKVLLRVAPTFHIQFG-LAVIVK 118

Query: 107 SLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
            + PS   G +   L K +  L   G+        +P     IAVI+ P  A + D   +
Sbjct: 119 DIEPSFTVGDMQRKLAKIRADLSAAGVIDWNRNRNVPGEFARIAVISPPDAAGLGDFKSQ 178

Query: 166 ---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR-PDIIILARGGGSI 221
              +          F  + QG   P EI +A+             R  D +++ RGGGS 
Sbjct: 179 ADILEDAGLCSFEYFHARFQGKGAPDEIVSAMRTALIRNRDAAHGRHYDALVIIRGGGSA 238

Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
            DL H ND  I  AI  + +P++  IGHE D  + D  A   A TP+        +  + 
Sbjct: 239 ADLAHLNDFAIANAICRTPLPVMVGIGHERDSVILDEVACYSAHTPSKLIAYITSIIFNN 298

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
             + +     +    +R +                                         
Sbjct: 299 AQAAMRDWQFITAFAMRSVAVAQEATE-----------------------------AQIQ 329

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            +    + +  +        +       +  ++  +Q I   +                 
Sbjct: 330 AVKVGGQKWLELAEVRSLSHIEMVTATAKASLVHAEQRISSSL----------------- 372

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
                             I+     +             + +           K TL+RG
Sbjct: 373 ----------------ETIRMSANHLLDTAKR---EAQNAFATVIG----MGPKRTLERG 409

Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           +   +      +++     + + + + F DG+    +++     
Sbjct: 410 FVITRHA-GKAVSRMEQARSLSDLELEFSDGRIAVSIVSDVTNP 452


>gi|299141434|ref|ZP_07034571.1| exodeoxyribonuclease VII, large subunit [Prevotella oris C735]
 gi|298577394|gb|EFI49263.1| exodeoxyribonuclease VII, large subunit [Prevotella oris C735]
          Length = 430

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 159/390 (40%), Gaps = 30/390 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66
            S+ EL+  ++ ++ + L     V  E+S  R +   GH Y  L  KD       ++  A
Sbjct: 4   LSLYELNNLVREVISTTLHDEYWVETELSELREVR--GHCYMELIQKDLFSNTPIAKASA 61

Query: 67  IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             WK     +              G++ L+            +  I+  + P    G + 
Sbjct: 62  KCWKNKWQLLSPKFEKVTGQSLRSGLKVLLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174
               +   +L  EG+F  Q +  +P   + IAV++S   A   D   +++          
Sbjct: 121 RKRMEIVNQLKGEGVFDLQKELKMPLFAQRIAVVSSANAAGYGDFCNQLADNSYGLQFHT 180

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +F   +QG+   + +  A+ ++N+          D++++ RGGG+  D+  F+   +  
Sbjct: 181 RLFSAVMQGEGVEQSVIAALNEINS-----NADDFDVVVIIRGGGATSDMSGFDTLSLAE 235

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PI++ IGH+ D ++ D  +  R  TPT AA   V   E +   +++ ++ L +
Sbjct: 236 NVANFPLPIVTGIGHDRDESVLDMVSHKRVKTPTAAAAFLVDHLERVYERVLDAQSELLS 295

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L  L + +P         +   LDR+   +   ++  + ++ R  + +
Sbjct: 296 NVRHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQKRLAQENRLLDSL 355

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             RIK   L   + +    +    Q  + +
Sbjct: 356 TQRIKPG-LERRLMRENYRLDLLSQRAKAL 384



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 53/139 (38%), Gaps = 2/139 (1%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHI 420
           L+ N++   +    + QH+ + +          ++  +  + +      + R+   +  +
Sbjct: 293 LLSNVRHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQKRLAQENRLL 352

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  RI+  L  ++   +  + + ++  ++      L+RGY+     N + +  K  L 
Sbjct: 353 DSLTQRIKPGLERRLMRENYRLDLLSQRAKALDPALLLRRGYSMTTL-NGHVVKDKSQLK 411

Query: 481 TKTRILINFFDGQANAIVI 499
               I+     G   +I+ 
Sbjct: 412 PGDEIVTRLEKGTVTSIIK 430


>gi|224536255|ref|ZP_03676794.1| hypothetical protein BACCELL_01122 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522141|gb|EEF91246.1| hypothetical protein BACCELL_01122 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 412

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            S+ EL+  ++  +E  L     V+ E+S  R   S+GH Y     KD       ++   
Sbjct: 4   LSLLELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFIQKDPRSNGLVAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
            IW      ++   EE        GI+ LV   ++       Y + ++ + P+   G + 
Sbjct: 63  TIWSNVYRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  K+L EEG+ +   +  +P +P+ IAVI+SPT A   D   ++      F    
Sbjct: 122 RRRREILKQLEEEGVLTLNKELEMPTLPQRIAVISSPTAAGYGDFCHQLKNNPRNFFFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QGD   + +  A+  +   +        D +++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGDRVEESVLAALDLILNRQ-----NDFDAVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE  +   +     L  L  +L++
Sbjct: 237 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEYLINCMDLAADELEVLITQLHD 296

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +I  +  +   L      +P++  + +S ++  L    +++   +   + R+    + +
Sbjct: 297 SVISRLTEEHRRLALYRNRIPSAVVRRVSDAKLALLTARKDISQAVTTSLARQQHRLDLL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 RQRLVDASPEKMLAR 371



 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 1/129 (0%)

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E +  I Q+    +  +  E +      + +      R+      +      I   ++ 
Sbjct: 285 DELEVLITQLHDSVISRLTEEHRRLALYRNRIPSAVVRRVSDAKLALLTARKDISQAVTT 344

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493
            +      + +  + L   + +  L RGY+     +   +     L  K  IL  F+ G+
Sbjct: 345 SLARQQHRLDLLRQRLVDASPEKMLARGYSITL-KDGKVVKDATLLNEKDEILTRFYRGE 403

Query: 494 ANAIVINKA 502
             ++V +K+
Sbjct: 404 VTSVVNHKS 412


>gi|281421172|ref|ZP_06252171.1| exodeoxyribonuclease VII, large subunit [Prevotella copri DSM
           18205]
 gi|281404707|gb|EFB35387.1| exodeoxyribonuclease VII, large subunit [Prevotella copri DSM
           18205]
          Length = 432

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 159/389 (40%), Gaps = 29/389 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
           +S+ EL+  ++ ++  +L     V  E+S  R  +  GH Y  L  KD       ++  A
Sbjct: 5   FSLYELNSMVRDVISMSLPDSYWVEAELSEAREGYG-GHCYLELIEKDERSNTPIAKAHA 63

Query: 67  IIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIP-SGSGTLL 117
             W+     I+   E         G++ L+            +  I++ + P    G + 
Sbjct: 64  SCWRNRWIFIKPNFERITGQRIHAGMKVLLKVHAQFHENYG-FSWIVDDIDPNYTMGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174
               +    L  E +F  Q +  +P   + IAVI+S T A   D   +++        + 
Sbjct: 123 RKRLEIINTLKAESVFELQKELALPMFCQRIAVISSATAAGYGDFCNQLADNDYGLQFQT 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG+   + +  A+  +N   E       D +++ RGGG+  DL  F+   +  
Sbjct: 183 RLFPATMQGEGVEQSVIAALDSINAEWEQ-----FDCVVIIRGGGATSDLSGFDTLALAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGHE D ++ D  +  R  TPT AA   V     + + ++N +  +  
Sbjct: 238 NVANFPLPIITGIGHERDESVLDMISFQRVKTPTAAAAFLVNHLTEVYARVMNAQEAIVQ 297

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHI 353
            +   ++ +   L+ L   +P     +   +   LDRL   L  N++  +    RHF  +
Sbjct: 298 NVKHRLQVEKMRLDRLSNTIPVQFSLVKTKQGAYLDRLMSRLSTNVQSKLSEAQRHFEIL 357

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
              I+   L   +      +    Q I+ 
Sbjct: 358 SQNIQPI-LERKMLNESHRLQLLSQRIQA 385



 Score = 95.6 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 5/137 (3%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----KNRIFYLHTHIK 421
           +Q  +  +  ++  ++++         L K ++ A L  L  +     ++++     H +
Sbjct: 296 VQNVKHRLQVEKMRLDRLSNTIPVQFSLVKTKQGAYLDRLMSRLSTNVQSKLSEAQRHFE 355

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L   I+ IL  K+ +    + + ++ +Q+   +  LKRGY+     +   I     L +
Sbjct: 356 ILSQNIQPILERKMLNESHRLQLLSQRIQAQDPELLLKRGYSITL-KDGKSIRSASQLKS 414

Query: 482 KTRILINFFDGQANAIV 498
              I   F +G   A V
Sbjct: 415 GDIIETRFAEGSVKAKV 431


>gi|328907901|gb|EGG27663.1| exodeoxyribonuclease VII large subunit [Propionibacterium sp. P08]
          Length = 392

 Score =  178 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 15/351 (4%)

Query: 33  SHVCVRGEISGYRGIHSSG-HAYFSLKDNHSRIDA--IIWKGTLNKIEFLPEEGIEFLVI 89
           S + V+ ++        SG   + +L+D    I A     +  L+      E G+    +
Sbjct: 5   SAIWVQAQVIEVTRR--SGPTQFLTLRDPAEEISASATCHRRVLDAAG-PIESGMTVTAL 61

Query: 90  GKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149
            K T +  + +    +  + P+G G LL  LE+RK+ L  EGLF       IP +P+ I 
Sbjct: 62  IKPTVWSRTGRLSFEVSEITPTGEGQLLAQLERRKRLLEAEGLFDATLHKTIPVLPRGIG 121

Query: 150 VITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208
           +IT       RD+ +  + R+P  R ++    VQG    +        +  L +    P 
Sbjct: 122 LITGAGSDAERDVQRHATLRWPAARFVVRNTLVQGPTAAQ------QIIAALADLDADPT 175

Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268
            D+I++ARGGGS+EDL  F+DE +VRA+  +  P++SAIGHE D  + D  ADLRA TPT
Sbjct: 176 VDVIVIARGGGSLEDLLPFSDEALVRAVYATRTPVVSAIGHERDNPILDLVADLRASTPT 235

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRY 326
            A ++ VP       ++   +ARL   I R I  ++  L  +     + N   TL  +  
Sbjct: 236 DAGKLIVPDATEQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMVNPAATLDIAVE 295

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           +LD   + L      ++  + R  +H++ R+++      + +    + + +
Sbjct: 296 KLDSTLQRLRLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSE 346



 Score = 89.8 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 2/144 (1%)

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           +  Q +   +  + Q + + +        +  +   M+       +      +   + R+
Sbjct: 247 EQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMV--NPAATLDIAVEKLDSTLQRL 304

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
               +  + +    VS     +++ + K TL RGY  + D+    IT   +  T   + +
Sbjct: 305 RLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSEGGSITSVDDTDTGAGLSV 364

Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511
              DG     V +           
Sbjct: 365 YLSDGTLGVTVNSLDRRTPNRPTT 388


>gi|281423497|ref|ZP_06254410.1| exodeoxyribonuclease VII, large subunit [Prevotella oris F0302]
 gi|281402317|gb|EFB33148.1| exodeoxyribonuclease VII, large subunit [Prevotella oris F0302]
          Length = 430

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 78/390 (20%), Positives = 157/390 (40%), Gaps = 30/390 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66
            S+ EL+  +  ++ + L     V  E+S  R +   GH Y  L  KD       ++  A
Sbjct: 4   LSLYELNNLVHEVISTTLHDEYWVETELSELREVR--GHCYMELIQKDLFSNTPIAKASA 61

Query: 67  IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             WK     +              G++ L+            +  I+  + P    G + 
Sbjct: 62  KCWKNKWQLLSPKFEKVTGQSLRSGLKVLLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174
               +   +L  EG+F  Q +  +P   + IAVI+S   A   D   +++          
Sbjct: 121 RKRLEIVNQLKAEGVFDLQKELKMPLFAQRIAVISSANAAGYGDFCNQLADNSYGLQFHT 180

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +F   +QG+   + +  A+ ++N+          D++++ RGGG+  D+  F+   +  
Sbjct: 181 RLFSAVMQGEGVEQSVIAALNEINS-----NVDDFDVVVIIRGGGATSDMSGFDTLSLAE 235

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGH+ D ++ D  +  R  TPT AA   V   E +   +++ +  L +
Sbjct: 236 NVANFPLPIITGIGHDRDESVLDMVSHTRVKTPTAAAAFLVDHLERVYERVLDAQNELLS 295

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHI 353
            I   ++ +   L  L + +P         +   LDR+   +   ++  + ++ R  + +
Sbjct: 296 TIQHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQTRLAQENRLLDGL 355

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             RI+   L   + +    +    Q  + +
Sbjct: 356 TQRIRPG-LERRLMRENYRLSLLSQRAKAL 384



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 2/139 (1%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHI 420
           L+  IQ   +    + QH+ + +          ++  +  + +      + R+   +  +
Sbjct: 293 LLSTIQHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQTRLAQENRLL 352

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
             L  RI   L  ++   +  +S+ ++  ++      L+RGY+     N + +  K  L 
Sbjct: 353 DGLTQRIRPGLERRLMRENYRLSLLSQRAKALDPALLLRRGYSMTTL-NGHVVKDKSQLK 411

Query: 481 TKTRILINFFDGQANAIVI 499
               I+     G   +I+ 
Sbjct: 412 PGDEIVTRLEKGTVTSIIK 430


>gi|253570356|ref|ZP_04847765.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 1_1_6]
 gi|251840737|gb|EES68819.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 1_1_6]
          Length = 419

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 6   LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 64

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 65  MIWSNIYRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 123

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F    
Sbjct: 124 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 183

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 184 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 238

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +         L  L ARL  
Sbjct: 239 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 298

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L++ +   L  +   +PN   + L+ +R+ L    ++L    + ++ R       +
Sbjct: 299 GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 358

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 359 RQRVADASPDKLLSR 373



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH I ++  H+ E    ++Q        +  E +    I   +      ++      +
Sbjct: 277 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFAL 333

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +       +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 334 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 392

Query: 481 TKTRILINFFDGQANAIV 498
              +++     G   + V
Sbjct: 393 PGDQLVTRLAKGSFTSEV 410


>gi|29349298|ref|NP_812801.1| exodeoxyribonuclease VII large subunit [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29341206|gb|AAO78995.1| putative exodeoxyribonuclease VII large subunit [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 417

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 4   LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 63  MIWSNIYRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F    
Sbjct: 122 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +         L  L ARL  
Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 296

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L++ +   L  +   +PN   + L+ +R+ L    ++L    + ++ R       +
Sbjct: 297 GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 357 RQRVADASPDKLLSR 371



 Score = 95.2 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH I ++  H+ E    ++Q        +  E +    I   +      ++      +
Sbjct: 275 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFAL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +       +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 332 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 390

Query: 481 TKTRILINFFDGQANAIV 498
              +++     G   + V
Sbjct: 391 PGDQLVTRLAKGSFTSEV 408


>gi|304313035|ref|YP_003812633.1| XseA, Exonuclease VII, large subunit [gamma proteobacterium HdN1]
 gi|301798768|emb|CBL47001.1| XseA, Exonuclease VII, large subunit [gamma proteobacterium HdN1]
          Length = 522

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 89/502 (17%), Positives = 167/502 (33%), Gaps = 74/502 (14%)

Query: 16  SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSR------IDAII 68
           S+S+L   +  ++       V    E+   +     GH Y  L +  ++         +I
Sbjct: 71  SLSQLLGGVSTVIARQFGEGVWTLVEVVQVQAR---GHVYLELSERDAQGQPIAKAKGMI 127

Query: 69  WKGTLNKI--EFLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119
           W  T  KI   F  E G+      + LV  +   F     + + I+ +  S   G L   
Sbjct: 128 WSATAKKILPVFERETGMVLGAGIKLLVRARP-VFHAQYGFSVEIDEIDASFTLGDLEAR 186

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--RFPL-RVII 176
             + +++L  EG+F    +   P+    I VI     A + D  +      RF L     
Sbjct: 187 KREIRERLQREGVFERNRQLAAPWDYYRILVIAPNEAAGLGDFRKEADRLARFGLCEFSY 246

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
              + QG+   +EI  A+ +          P  D I L RGGG++ DL   ND  + R I
Sbjct: 247 AYSRFQGEGAAQEIVAALTKAFATYPKNAPP--DAIALIRGGGAVNDLAWLNDYDLARCI 304

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
            +  +P+++ IGHE D TL D  A+ R  TP+                            
Sbjct: 305 CDLPVPVLTGIGHERDNTLPDEVANQRFDTPSKVV------------------------- 339

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
                              +    +             +   +   +        ++  +
Sbjct: 340 ------------------AHIQTLIVQRAQAARDAGGFVFSAVAAQVQT-----ANLETQ 376

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-HMLREQTKNRIFY 415
                L HN Q            ++Q +    R   +  + K  +    +++ +   +  
Sbjct: 377 RAIMELRHNAQAQLSEAKLSVPRLQQEITASARENLMLAQSKTELGWQAVKQSSLANVRA 436

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
                ++  +R+      ++KS         R +     + TL RG+  ++  +   +T 
Sbjct: 437 ARQACEESRSRVAERADVQLKSAQQQAIALMREITGQGPEKTLARGFVIVRAGDQKPVTS 496

Query: 476 KRNLATKTRILINFFDGQANAI 497
             +  +  R  + F DG    +
Sbjct: 497 LSHAQSLDRFNVQFKDGVLPVV 518


>gi|160883142|ref|ZP_02064145.1| hypothetical protein BACOVA_01111 [Bacteroides ovatus ATCC 8483]
 gi|156111367|gb|EDO13112.1| hypothetical protein BACOVA_01111 [Bacteroides ovatus ATCC 8483]
          Length = 429

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 95/393 (24%), Positives = 169/393 (43%), Gaps = 32/393 (8%)

Query: 1   MNPFSQKNSLDHPE----YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY- 54
           MN   Q +S    E     S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y 
Sbjct: 5   MNKSKQSDSPSLGEGGERLSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYL 63

Query: 55  -FSLKDNH-----SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSK 100
            F  KD       ++   +IW      ++   EE        GI+ LV   +        
Sbjct: 64  EFVQKDPRSNNLVAKARGMIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG- 122

Query: 101 YQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVI 159
           Y + +  + P+   G +     +   +L EEG+ +   +  IP +P+ IAVI+S T A  
Sbjct: 123 YSLTVLDIDPAYTLGDMARRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGY 182

Query: 160 RDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR 216
            D   ++      F     +FP  +QG++  + +  A+ ++N           D++++ R
Sbjct: 183 GDFCHQLQHNSGGFFFYTELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIR 237

Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVP 276
           GGG+  DL  F+  ++  A A   +PII+ IGHE D T+ D  A  R  TPT AAE+ + 
Sbjct: 238 GGGATSDLSGFDTYLLAAACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIH 297

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPREL 335
               +   L  L  R+      L+  +   L +L   +PN   + L+ +R+ L    ++L
Sbjct: 298 RVAEVAEHLEELSMRIQQGAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDL 357

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               + ++ R+      +  RI        + +
Sbjct: 358 LQVTKALVARQSHRLELLQQRIADASPDKLLSR 390



 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    I+Q        + LE++    +   +      ++      +
Sbjct: 294 LLIHRVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 351 LAAKKDLLQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409

Query: 481 TKTRILINFFDGQANAIV 498
               ++     G+  ++V
Sbjct: 410 PGDHLITRLSKGEVRSVV 427


>gi|298384833|ref|ZP_06994392.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 1_1_14]
 gi|298261977|gb|EFI04842.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 1_1_14]
          Length = 419

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 6   LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 64

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 65  MIWSNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 123

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  +P +P+ IAVI+S T A   D   ++      F    
Sbjct: 124 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 183

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 184 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 238

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +         L  L ARL  
Sbjct: 239 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 298

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L++ +   L  +   +PN   + L+ +R+ L    ++L    + ++ R       +
Sbjct: 299 GAYALLEQEGRRLGMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 358

Query: 354 INRIKSDFLIHNIQK 368
             R+        + +
Sbjct: 359 RQRVADASPDKLLSR 373



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH I ++  H+ E    ++Q        +  E +    I   +      ++      +
Sbjct: 277 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLGMIQTRIPNLVHRKLTDARFAL 333

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +       +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 334 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 392

Query: 481 TKTRILINFFDGQANAIV 498
              +++     G   + V
Sbjct: 393 PGDQLVTRLAKGSFTSEV 410


>gi|260171964|ref|ZP_05758376.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2]
 gi|315920275|ref|ZP_07916515.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2]
 gi|313694150|gb|EFS30985.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2]
          Length = 429

 Score =  176 bits (447), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   
Sbjct: 23  LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 81

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 82  MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 140

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  IP +P+ IAV++S T A   D   ++      F    
Sbjct: 141 RRRREILLQLEEEGVLTLNKELEIPVLPQRIAVVSSATAAGYGDFCHQLQHNSGGFFFYT 200

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  
Sbjct: 201 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 255

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +PII+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  R+  
Sbjct: 256 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRVAEVAEHLEELSIRIQQ 315

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L+  +   L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +
Sbjct: 316 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 375

Query: 354 INRIKSDFLIHNIQK 368
             RI        + +
Sbjct: 376 QQRIADASPDKLLSR 390



 Score = 91.4 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    I+Q        + LE++    +   +      ++      +
Sbjct: 294 LLIHRVAEVAEHLEELSIRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 351 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409

Query: 481 TKTRILINFFDGQANAIV 498
               ++     G+  ++V
Sbjct: 410 PGDHLITRLSKGEVRSVV 427


>gi|325269341|ref|ZP_08135958.1| exodeoxyribonuclease VII large subunit [Prevotella multiformis DSM
           16608]
 gi|324988262|gb|EGC20228.1| exodeoxyribonuclease VII large subunit [Prevotella multiformis DSM
           16608]
          Length = 438

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 159/389 (40%), Gaps = 30/389 (7%)

Query: 12  HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63
               ++ +L+  +  ++++ L+    V  E+S  R     GH Y  L  KD+      +R
Sbjct: 2   TKALTLYDLNSLVADVIDTALTRAYWVEAELSEVRENR--GHCYMELIEKDDTGNVPIAR 59

Query: 64  IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114
             A  W+   + I              G++ ++      F     +  I++ + P    G
Sbjct: 60  ASAKCWRNVWSAISPYFVRITGQQIHAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 118

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171
            +L       ++L  EG+F  Q    +    + IAVI+S T A   D   ++      F 
Sbjct: 119 DMLRKRRDIVRRLQAEGVFDLQKGLRLSLFAQRIAVISSETAAGYGDFCSQLETNEYGFR 178

Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231
            RV IFP  +QG++  + I  A+  +N  +        D +++ RGGG+  DL  F+   
Sbjct: 179 FRVEIFPAVMQGEQVEQSIIAALDSINERESE-----FDAVVIIRGGGATADLSGFDTLE 233

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291
           +   +AN  +P+I+ IGHE D ++ D  + LR  TPT AA   +         +   +  
Sbjct: 234 LAENVANFPLPVITGIGHERDESVLDMVSFLRVKTPTAAAAFLIDQLSVTLGRIERAQTA 293

Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350
           + + + R ++ +   +  L   +P     +      RL+RL R L      ++ R Y   
Sbjct: 294 IADGVRRKMEAEKMRIRHLESHIPVLFSVVRAKEEARLERLSRNLSEKTAELLHRSYYRL 353

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQH 379
           + +  R++S  L   +      +    Q 
Sbjct: 354 DLLGQRLRSG-LKIRLSAEGHRLDMLDQR 381



 Score = 70.2 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 45/133 (33%), Gaps = 5/133 (3%)

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLIT 425
           R+ +  ++  I  +         + + ++ A L  L      +    +   +  +  L  
Sbjct: 299 RRKMEAEKMRIRHLESHIPVLFSVVRAKEEARLERLSRNLSEKTAELLHRSYYRLDLLGQ 358

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485
           R+   L  ++ +    + +  + L        L+RGY+         +     L     I
Sbjct: 359 RLRSGLKIRLSAEGHRLDMLDQRLHLLDPSLLLERGYSITLYK-GRAVRSAAELEEGEVI 417

Query: 486 LINFFDGQANAIV 498
              F  G+A++ +
Sbjct: 418 TTRFATGEADSRI 430


>gi|325479405|gb|EGC82501.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 394

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 105/378 (27%), Positives = 175/378 (46%), Gaps = 16/378 (4%)

Query: 12  HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
               SV + + + K  ++ +    ++ + G++S  R  +S  H YFSLK+++  ID +I+
Sbjct: 2   RKPLSVKQFNEYFKSNIKHDPIFQNLYINGQLSNIRVNNS--HLYFSLKEDNEIIDCVIY 59

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPG-SSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
                 I F  EEGI+  V G +  +   SS+  I  + +   G           K++  
Sbjct: 60  YFEDKDINFDFEEGIDVNVKGNV-FYNNYSSRIIISAKEVSEVGISENYKKFLDMKEEFR 118

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           + G F + +K  IP  PK + +ITS  GA + D +  I+ +   + + ++PVKVQG E  
Sbjct: 119 KLGYFDEINKKAIPKYPKKVGLITSKDGAAVIDFISVINQKANDINIFLYPVKVQGLESS 178

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             I  AI               D+I++ RGGGS EDL  FN+  IV A+ ++  PIISAI
Sbjct: 179 NLIKQAI-------CDLDHKNLDVIVITRGGGSNEDLSTFNNRDIVEAVFDAKTPIISAI 231

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           GH+ D TL D  +DL   TPT A    +    +L+  L ++  ++  II   I      L
Sbjct: 232 GHKIDLTLLDLVSDLSLQTPTEAGSYIIASYANLEKDLDDVIHKMKQIIGAEIDSFERNL 291

Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             L + L   +    L+     L  + +EL+  L+  +         I + +     + N
Sbjct: 292 LFLERDLRSFHPLNNLNNIELELSFIKKELDTKLKNSLSINENRLKLIKSNLDHQNDVIN 351

Query: 366 IQKNRQHILEKQQHIEQI 383
           I+K+   +  K ++I   
Sbjct: 352 IKKSMIFVKAKDKNIYSA 369



 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
           +        +      N +  +   +  +   ++  L + +      + +    L     
Sbjct: 289 RNLLFLERDLRSFHPLNNLNNIELELSFIKKELDTKLKNSLSINENRLKLIKSNLDHQND 348

Query: 455 KNTLKRGYTSIQ-DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
              +K+  + I     +  I   ++L    +I++ F DG   A +I+ 
Sbjct: 349 VINIKK--SMIFVKAKDKNIYSAKSLDVGDKIILGFSDGDVKAEIIDG 394


>gi|255690528|ref|ZP_05414203.1| exodeoxyribonuclease VII, large subunit [Bacteroides finegoldii DSM
           17565]
 gi|260623982|gb|EEX46853.1| exodeoxyribonuclease VII, large subunit [Bacteroides finegoldii DSM
           17565]
          Length = 442

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 92/387 (23%), Positives = 170/387 (43%), Gaps = 30/387 (7%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKD 59
           PFS     +    S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y  F  KD
Sbjct: 13  PFSSGEGGER--LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKD 69

Query: 60  NH-----SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIE 106
                  ++   +IW      ++   EE        GI+ LV   +        Y + + 
Sbjct: 70  PRSNSLIAKARGMIWNTIYRLLKPYFEETTGQPFTSGIKVLVKVTVQFHELYG-YSLTVL 128

Query: 107 SLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
            + P+   G +     +   +L EEG+ +   +  +P +P+ IAVI+S T A   D   +
Sbjct: 129 DIDPAYTLGDMARHRREILLQLEEEGVLTLNKELEMPQLPQRIAVISSATAAGYGDFCHQ 188

Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222
           +      F     +FP  +QG++  + +  A+ ++N   +       D++++ RGGG+  
Sbjct: 189 LQHNPGGFFFYTELFPALMQGNQVEESVLAALDRVNARIDD-----FDVVVIIRGGGATS 243

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           DL  F+  ++  A A   +PII+ IGHE D T+ D  A  R  TPT AAE+ +     + 
Sbjct: 244 DLSGFDTYLLAAACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRVAEVA 303

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEI 341
             L +L  R+      L++ +   L++L   +PN   + L+ +R+ L    ++L      
Sbjct: 304 DRLEDLSVRIRQGAYMLLERERRRLDTLQARIPNLVQRKLTETRFALLTARKDLSQATMA 363

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQK 368
           ++ R+      +  RI        + +
Sbjct: 364 LLSRQRHRLELLQQRIADASPDKLLSR 390



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 47/140 (33%), Gaps = 4/140 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +    + +    I Q        +  E++    +   +    + ++      +
Sbjct: 294 LLIHRVAEVADRLEDLSVRIRQGAYM---LLERERRRLDTLQARIPNLVQRKLTETRFAL 350

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +       +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 351 LTARKDLSQATMALLSRQRHRLELLQQRIADASPDKLLSRGYSITL-KDGKAVTDASSLK 409

Query: 481 TKTRILINFFDGQANAIVIN 500
           +  R++  F  G+A ++V  
Sbjct: 410 SGDRLVTRFSKGEAQSVVEQ 429


>gi|304390379|ref|ZP_07372332.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315657586|ref|ZP_07910468.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|304326135|gb|EFL93380.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315492058|gb|EFU81667.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 420

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 172/368 (46%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            + +     + +S LS ++++ V + +    +  +I  Y     +  ++F +KD  + + 
Sbjct: 12  ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70

Query: 66  --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
                + G +         G   ++  K   +  +    ++   + P+G G  L  LE+ 
Sbjct: 71  MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+KL  EG+F+ +HK  +PF+P+ + +I         D+++  + R+P ++  I  V VQ
Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C  E++ AI +L+ L E       D+I++ RGGG++EDL  F+DE +VRA   +  P
Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAYAARTP 244

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D  L D+ AD RA TPT A +  VP        L     R+  +I   I+ 
Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +  L+++     + N    L   R  ++     L   +  ++  + R        +++ 
Sbjct: 305 GLRELDAIRSRPVMQNPQAALDERRRDINHGVEMLRSRVAAVLANQARDLAAARATLRAI 364

Query: 361 FLIHNIQK 368
                +++
Sbjct: 365 SPQATLER 372



 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 41/131 (31%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
                      R     ++        + +  +  +      I   +  +   ++  + +
Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPQAALDERRRDINHGVEMLRSRVAAVLAN 349

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               ++     L++ + + TL+RGY  ++  +   +T    +     +      G   A 
Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409

Query: 498 VINKAPPKEQP 508
           V    P +++ 
Sbjct: 410 VFGTNPHRDER 420


>gi|298345917|ref|YP_003718604.1| exodeoxyribonuclease VII [Mobiluncus curtisii ATCC 43063]
 gi|298235978|gb|ADI67110.1| exodeoxyribonuclease VII [Mobiluncus curtisii ATCC 43063]
          Length = 420

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 172/368 (46%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            + +     + +S LS ++++ V + +    +  +I  Y     +  ++F +KD  + + 
Sbjct: 12  ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70

Query: 66  --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
                + G +         G   ++  K   +  +    ++   + P+G G  L  LE+ 
Sbjct: 71  MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+KL  EG+F+ +HK  +PF+P+ + +I         D+++  + R+P ++  I  V VQ
Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C  E++ AI +L+ L E       D+I++ RGGG++EDL  F+DE +VRA   +  P
Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAYAARTP 244

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D  L D+ AD RA TPT A +  VP        L     R+  +I   I+ 
Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +  L+++     + N    L   R  ++     L   +  ++  + R        +++ 
Sbjct: 305 GLRELDAIRSRPVMQNPKAALDERRRDINHGVEMLRSRVAAVLANQARDLAAARATLRAI 364

Query: 361 FLIHNIQK 368
                +++
Sbjct: 365 SPQATLER 372



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 14/131 (10%), Positives = 41/131 (31%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
                      R     ++        + +  K  +      I   +  +   ++  + +
Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPKAALDERRRDINHGVEMLRSRVAAVLAN 349

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               ++     L++ + + TL+RGY  ++  +   +T    +     +      G   A 
Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409

Query: 498 VINKAPPKEQP 508
           V    P +++ 
Sbjct: 410 VFGTNPHRDER 420


>gi|315654505|ref|ZP_07907411.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii ATCC
           51333]
 gi|315490969|gb|EFU80588.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii ATCC
           51333]
          Length = 420

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 173/368 (47%), Gaps = 12/368 (3%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
            + +     + +S LS ++++ V + +    +  +I  Y     +  ++F +KD  + + 
Sbjct: 12  ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70

Query: 66  --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
                + G +         G   ++  K   +  +    ++   + P+G G  L  LE+ 
Sbjct: 71  MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182
           K+KL  EG+F+ +HK  +PF+P+ + +I         D+++  + R+P ++  I  V VQ
Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G+ C  E++ AI +L+ L E       D+I++ RGGG++EDL  F+DE +VRA   +S P
Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAFAASTP 244

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I+SA+GHE D  L D+ AD RA TPT A +  VP        L     R+  +I   I+ 
Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304

Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +  L+++     + N    L   R  ++     L   +  ++  + R        +++ 
Sbjct: 305 GLRELDAIRSRPVMQNPQAALDERRRDINHGVEILRSRVAAVLANQARDLAAARATLRAI 364

Query: 361 FLIHNIQK 368
                +++
Sbjct: 365 SPQATLER 372



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 41/131 (31%)

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
                      R     ++        + +  +  +      I   +  +   ++  + +
Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPQAALDERRRDINHGVEILRSRVAAVLAN 349

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               ++     L++ + + TL+RGY  ++  +   +T    +     +      G   A 
Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409

Query: 498 VINKAPPKEQP 508
           V    P +++ 
Sbjct: 410 VFGTNPHRDER 420


>gi|313158254|gb|EFR57656.1| exodeoxyribonuclease VII, large subunit [Alistipes sp. HGB5]
          Length = 415

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 26/371 (7%)

Query: 16  SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67
           ++S+L   +K  +    +  V V  EIS  +  + SGH Y  L +         ++  A+
Sbjct: 8   TLSQLQRLVKEALHERFALPVWVSAEISEIKVNY-SGHCYLELVEKGGDNGVPLAQSRAV 66

Query: 68  IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118
           IW+    +I              GI+ L    +  +     + + I  + P+   G +  
Sbjct: 67  IWRTAYPRIAGYFEAETGQRLAAGIKILAKVAVN-YHELYGFSLQITDIDPTYTLGDMER 125

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIF 177
             +    +L +EG++    + P+P + + +AV++S   A  +D  + ++   +   V +F
Sbjct: 126 QRQITIAQLQQEGVWDMNREAPMPVVVQRVAVVSSANAAGYQDFRKELAKSPYRFDVTLF 185

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              +QG    + I  A+  +    +       D ++L RGGGS  DL  FN   +   +A
Sbjct: 186 DAFMQGAAAEESIVAALCAVAERMDE-----FDAVVLIRGGGSASDLNCFNAYRLCAHVA 240

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
              +PI++ IGH+ D ++AD  A     TPT  A   V      +  L     +L++   
Sbjct: 241 QFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTQAEGWLDYAALQLHDATK 300

Query: 298 RLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
             +      L  L   L       L+  R R + L   L   +   + R+    ++    
Sbjct: 301 AAMHASEVRLERLTGDLRQMSGDLLTRQRLRAEHLSALLPEAVRNFLARQATRLDNAAEL 360

Query: 357 IKSDFLIHNIQ 367
           I        ++
Sbjct: 361 IAGRSPERILR 371



 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 58/189 (30%), Gaps = 4/189 (2%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N+ +  +        +   + H+ +  +     H         + +L+  + +    +  
Sbjct: 231 NAYRLCAHVAQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTQAEGWLDY 290

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
               +    K  +    +  +     L   R+ + + +       + L   +   + + +
Sbjct: 291 AALQLHDATKAAMHASEVRLERLTGDL---RQMSGDLLTRQRLRAEHLSALLPEAVRNFL 347

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               T +     ++   + +  L+ G+  ++      +   R++     + I   DG  +
Sbjct: 348 ARQATRLDNAAELIAGRSPERILRLGFAVVRT-GGKAVVSARDVRKGDALEIEVADGTIH 406

Query: 496 AIVINKAPP 504
             V    P 
Sbjct: 407 GTVQRSEPK 415


>gi|153809109|ref|ZP_01961777.1| hypothetical protein BACCAC_03419 [Bacteroides caccae ATCC 43185]
 gi|149128442|gb|EDM19661.1| hypothetical protein BACCAC_03419 [Bacteroides caccae ATCC 43185]
          Length = 409

 Score =  173 bits (438), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            S+ EL+  ++  +E  L     ++ E+S  R   ++GH Y     KD       ++   
Sbjct: 4   LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFIQKDPRSNSLVAKARG 62

Query: 67  IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           +IW      ++   EE        GI+ LV   +        Y + +  + P+   G + 
Sbjct: 63  MIWNNIYRLLKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPTYTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +   +L EEG+ +   +  +P +P+ IAV++S T A   D   ++      F    
Sbjct: 122 RRRREILLQLEEEGVLTLNKELEMPVLPQRIAVVSSATAAGYGDFCHQLKHNSGGFFFYT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  + +  A+  +NT          D++++ RGGG+  DL  F+  ++  
Sbjct: 182 ELFPALMQGNQVEESVLAALDCINTRISE-----FDVVVIIRGGGAASDLSGFDTYLLAA 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A A   +P+I+ IGHE D T+ D  A  R  TPT AAE+ +         L  L ARL  
Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIQRVGEAAERLEELSARLQQ 296

Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
               L++ +   L ++   +P    + LS +R+ L    ++L    + ++ R+      +
Sbjct: 297 GAYTLLEQEQRRLVTMQARIPALVHRKLSEARFTLLTAQKDLSQVTQNLLSRQRYRLELL 356

Query: 354 INRIKSDFLIHNIQK 368
             R+  +     + +
Sbjct: 357 QQRVADNSPEKLLSR 371



 Score = 94.1 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LI  + +  + + E    ++Q        +  E++  + +   +      ++      +
Sbjct: 275 LLIQRVGEAAERLEELSARLQQ---GAYTLLEQEQRRLVTMQARIPALVHRKLSEARFTL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +  + +      + +  + +   + +  L RGY+     +   +T    L 
Sbjct: 332 LTAQKDLSQVTQNLLSRQRYRLELLQQRVADNSPEKLLSRGYSITL-KDGKAVTDASLLQ 390

Query: 481 TKTRILINFFDGQANAIV 498
              ++      G+  + V
Sbjct: 391 PGDQLTTRLLKGEVQSTV 408


>gi|256426147|ref|YP_003126800.1| exodeoxyribonuclease VII [Chitinophaga pinensis DSM 2588]
 gi|256041055|gb|ACU64599.1| Exodeoxyribonuclease VII [Chitinophaga pinensis DSM 2588]
          Length = 475

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 78/522 (14%), Positives = 182/522 (34%), Gaps = 86/522 (16%)

Query: 16  SVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
           ++S+L+  ++  +++  S     V  +I+ +    + G+ YF +  KD       ++I  
Sbjct: 8   TLSQLAAGIQGTIKNAFSGQSYWVVADITSHSFYPAKGYHYFDMVEKDPRSHQMIAKIST 67

Query: 67  IIWKGTLNKIE-------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118
             W     +I+             ++ LV   +  F      ++ +  + PS   G L  
Sbjct: 68  TAWGNGSTRIKEFENVTGQRFSNDMQVLVRVAVE-FHPVYGLKLSLMDIDPSYTIGQLEQ 126

Query: 119 ALEKRKKKLLEE----------GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168
             +   ++L+ E          G  +      +  + + IAVI+S + A  +D +  +  
Sbjct: 127 QKQATLQRLVTECADIVQKTPDGYMTRNKALRLNPVIQRIAVISSASSAGYQDFMHTMQS 186

Query: 169 ---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225
              ++      +   VQG+    ++   +  +       +  + D +++ RGGG+  DL 
Sbjct: 187 NAYKYIFYTDNYFTAVQGEANATQVCIQLDAIIA-----SGKQYDTVVIIRGGGAQTDLL 241

Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285
            F+   + +A+A   +P+I+ IGH  + T+ D  A     TPT AAE+ +      + +L
Sbjct: 242 LFDQYALGKAVAGFPVPVITGIGHHKNETITDMLAHTATKTPTRAAELIIAHNRTFEEAL 301

Query: 286 INLEARLNNIIIRLIK-YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
           +  ++++   + ++I   K    +     +  S   LS  R  L R  + +       + 
Sbjct: 302 LTQQSQIIIRMQQMIAGRKKQLSSLHTGIINRSRDLLSVHRDGLTRAKQAIPQRARHTLL 361

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           R+    + +  ++                                               
Sbjct: 362 RQRNAISQLSGQL----------------------------------------------- 374

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
              +           +  +   I+      ++     +     +++  +    L++G+  
Sbjct: 375 -LAKPGQVTASRLQELAHIRKDIQVYARKLLQQQQQKLVHHETVVRIMSPAALLQKGFAM 433

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           +Q      IT    L+    I +   D   +A + +K     
Sbjct: 434 VQHK-GQIITSAAQLSPGDEITVQMADAGVHATITSKTTTDG 474


>gi|207092659|ref|ZP_03240446.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 138

 Score =  173 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 79/136 (58%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
             SVSE++  +K ++E+    V V+GE+S       S HAYFSLKD+ S I  +++KG  
Sbjct: 3   VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSSHAYFSLKDSQSVIKCVLFKGNA 62

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133
           N+++F  +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+KL  +G F
Sbjct: 63  NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122

Query: 134 SDQHKNPIPFIPKIIA 149
             ++K P P  PK +A
Sbjct: 123 DKENKLPKPHFPKRVA 138


>gi|299783414|gb|ADJ41412.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus fermentum CECT
           5716]
          Length = 336

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 78/357 (21%), Positives = 145/357 (40%), Gaps = 29/357 (8%)

Query: 150 VITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208
           ++TS   AV  DI+  +  R   ++++ +P +VQG++   EIA  I +++          
Sbjct: 1   MVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQAAGEIAAQIKRVSDA------ND 54

Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268
            D +I+ARGGGS+EDLW FN+E++ RAI  +++P+IS+IGHETD T+ D  AD+R  TPT
Sbjct: 55  YDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISSIGHETDTTITDLVADVRTATPT 114

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYKINTLNSLLKALPNSDQTLSCSR 325
            AAE           + +  E  L     +       +     +    L   ++      
Sbjct: 115 AAAEAVTKWPLADVIAEVEREQTLLYTAEKRQLANLKQRLLALTESYFLKQPERLYERQV 174

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
            ++D L   L+    +++  + R    +   ++       + K +  +   QQ +   ++
Sbjct: 175 QQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPRAQLAKQQMQLARLQQGLRAGMR 234

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
            H                   E+ + R+  L    +     +     +  +     +   
Sbjct: 235 GH------------------LEEERGRLIRLEEGRRASTNLLLQATQNYQRGQAQRLDTL 276

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            + L + +    L RG+  +   +   +     LA      + F  GQA   V    
Sbjct: 277 IKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGDEATVKFEQGQAQVTVTKIE 332


>gi|330901798|gb|EGH33217.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 201

 Score =  173 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 81/136 (59%), Gaps = 2/136 (1%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +PF+ +  LD    +VS+L+   + ++E   S + V GEIS      +SGH YF+LKD+ 
Sbjct: 16  DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
           +++   +++ +  ++    ++G++  V GK++ F G   YQ+I++++ P+G G L  A +
Sbjct: 74  AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133

Query: 122 KRKKKLLEEGLFSDQH 137
             K KL +EGLFS Q 
Sbjct: 134 ALKAKLSDEGLFSAQR 149


>gi|333029307|ref|ZP_08457368.1| Exonuclease VII, large subunit [Bacteroides coprosuis DSM 18011]
 gi|332739904|gb|EGJ70386.1| Exonuclease VII, large subunit [Bacteroides coprosuis DSM 18011]
          Length = 417

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 91/387 (23%), Positives = 177/387 (45%), Gaps = 28/387 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +     S+ EL+  ++  +E+ L     ++ EIS  R   +SGH Y     KD       
Sbjct: 1   MSENILSLLELNNLVRRGIEACLPDTYWIQAEISDVRSN-TSGHCYLEFIQKDERTSSLI 59

Query: 62  SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112
           ++   +IW    + +    EE        G++ LV  ++T       Y + ++++ P+  
Sbjct: 60  AKARGVIWSNVFHVLRPYFEETTGETFHSGLKVLVEVEVTFHELYG-YSLTVQNIDPTYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFP 171
            G ++       K+L EEG+ +   +  +P + + IAVI+S T A   D   ++    + 
Sbjct: 119 LGDMVKRRTDILKQLEEEGVLTLNKELELPLLTQRIAVISSATAAGYGDFCDQLKGNSWG 178

Query: 172 LRVI--IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           +     +FP  +QG++  + I NA+  +   K        D++++ RGGG+  DL  F+ 
Sbjct: 179 ISFYTELFPAIMQGEQVERTILNALDAILARK-----KDFDVVVIIRGGGATSDLSGFDT 233

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
            ++  + A   +PII+ IGHE D T+ D  A+ R  TPT AAE  V    ++   L +L 
Sbjct: 234 YLLAASCAQFPMPIITGIGHERDDTVLDVVANTRVKTPTAAAEFLVNRMMNVIGRLNDLS 293

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQT-LSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            +L   +++ ++ +   LN L+  LP++    ++   +++  L   L+ +  + +  +  
Sbjct: 294 FQLKTSVVQKLQMETERLNRLIARLPSNVNLSIANENFKVKDLYNRLKLSTNLYLKDQQY 353

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILE 375
               I   IKS      ++K    + +
Sbjct: 354 LLRSISLEIKSISPYEILKKGYALLSQ 380



 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 4/142 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
           FL++ +      + +    ++  V Q L+         IA L          I   +  +
Sbjct: 277 FLVNRMMNVIGRLNDLSFQLKTSVVQKLQMETERLNRLIARLP---SNVNLSIANENFKV 333

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
           K L  R++   +  +K     +   +  ++S +    LK+GY  +   N   I+  +++ 
Sbjct: 334 KDLYNRLKLSTNLYLKDQQYLLRSISLEIKSISPYEILKKGYALL-SQNGVIISSIKDIE 392

Query: 481 TKTRILINFFDGQANAIVINKA 502
             + I+I  +DG++ A +  K 
Sbjct: 393 EDSDIIIKMYDGESKAHIEKKT 414


>gi|300726767|ref|ZP_07060197.1| exodeoxyribonuclease VII, large subunit [Prevotella bryantii B14]
 gi|299775880|gb|EFI72460.1| exodeoxyribonuclease VII, large subunit [Prevotella bryantii B14]
          Length = 431

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 159/397 (40%), Gaps = 51/397 (12%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            S+ EL++ +  ++   L   + V+ E+S YR   ++GH +  L  KDNH     ++  A
Sbjct: 5   LSLYELNHLVHDVIAIQLPDSIWVQAELSEYRE--NNGHCFMELIEKDNHLNTPIAKASA 62

Query: 67  IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117
             W+     I              G++ ++            +  +I+ + P+   G + 
Sbjct: 63  KCWRNRWVYIRAGFERITGMHLRAGMKIMLQVHAEFHENYG-FSWMIDDIDPTFTLGDMA 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +  + L +EG+F  Q +  IP   + +AVI+S   A   D   ++          +
Sbjct: 122 RKRLEIIQVLKDEGVFDLQKQLVIPMFCQRVAVISSVHAAGYGDFCHQMQNNEYGLSFNI 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +FP  +QG++  K +  A+  +N   E       D++++ RGGG+  D+  F+  ++  
Sbjct: 182 ELFPAVMQGEQIEKSVIRALNLINERYEE-----FDVVVIIRGGGATSDMSGFDTLVLAE 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGHE D ++ D  ++ R  TPT AA   +     + + + N    + +
Sbjct: 237 NVANFPLPIITGIGHERDESVLDMISNTRVKTPTAAATFLIEHLAQVYNRVQNASDFIFS 296

Query: 295 IIIRLIKYKINTLNSLLKALP-----------------------NSDQTLSCSRYRLDRL 331
            +   +  +   +  L   +P                          + +      LDRL
Sbjct: 297 YVRERMTREKMRIQHLGGRIPLMFSLVKTSHLRKLDAIESKLNNQVGRLILQQFQYLDRL 356

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              +   ++  + ++      I  ++        +++
Sbjct: 357 QMAMLPAIQRKLNKEQYRLQMIEQQVMLSDPTLLLKR 393



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 50/161 (31%), Gaps = 5/161 (3%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L   + + Y    +  + I S      + + +  I      I  +            ++ 
Sbjct: 276 LIEHLAQVYNRVQNASDFIFSYV-RERMTREKMRIQHLGGRIPLMFSLV---KTSHLRKL 331

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            AI   L  Q    I     ++ +L   +   +  K+      + +  + +        L
Sbjct: 332 DAIESKLNNQVGRLILQQFQYLDRLQMAMLPAIQRKLNKEQYRLQMIEQQVMLSDPTLLL 391

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           KRGY+     N   +     L     I+    +G+  +IV 
Sbjct: 392 KRGYSITLL-NGKVVKDASCLHVGDEIITRVENGEIRSIVK 431


>gi|313677304|ref|YP_004055300.1| exonuclease vii, large subunit [Marivirga tractuosa DSM 4126]
 gi|312944002|gb|ADR23192.1| Exonuclease VII, large subunit [Marivirga tractuosa DSM 4126]
          Length = 415

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 156/368 (42%), Gaps = 28/368 (7%)

Query: 16  SVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNHS-----RIDAI 67
           S+++L+  +K  + + L     V  EI   R    +GH Y     KD  S     +  A 
Sbjct: 5   SLTDLNLLIKDTLNTQLEPSYWVVAEIGELRE-ARNGHCYLEFVEKDEESNQLLSKSRAT 63

Query: 68  IWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118
           IW  +   I            + G+  L   ++          + ++ + P+   G    
Sbjct: 64  IWSYSYRSISAWFQSITGESLKAGMTVLANIQVQFHEVYG-LSLNVKDIDPNFTLGERAR 122

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR---FPLRVI 175
             ++   +L E+G+F     +P+P +P+ IA+I++ + A   D + +I      + L+  
Sbjct: 123 KKQEIIAQLKEDGVFEMNKSHPLPMVPQRIAIISAESAAGYGDFMNQILDNNYEYKLQTQ 182

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +F   +QGD+  + I +++ Q++   E       D ++L RGGG+  DL  F+D  +   
Sbjct: 183 LFVATMQGDKAAQTIISSLHQIHEQMEN-----FDAVVLIRGGGAQVDLDCFDDYELAAH 237

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           IA   IP+ + IGHE D T+ D  A  +  TPT  AE  +      +  L      +   
Sbjct: 238 IAQFPIPVFTGIGHERDETICDLVAHTKLKTPTAVAEFLIRGMRIYEEKLNLATNNILAY 297

Query: 296 IIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
           + + ++ + + LN    ++  +  +  + +  +L R  +++++++       ++      
Sbjct: 298 LNQKVEREQHKLNDRKHSMRYALKKHFNKAENQLSRYQQKMQYDIRKSFQNTHQKLEIYQ 357

Query: 355 NRIKSDFL 362
             ++    
Sbjct: 358 KTLELINP 365



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 2/125 (1%)

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            I+    + +  E+ +     H +R   K         + +   ++++ +    ++ H  
Sbjct: 293 NILAYLNQKVEREQHKLNDRKHSMRYALKKHFNKAENQLSRYQQKMQYDIRKSFQNTHQK 352

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           + I  + L+        K+GY+     N   I   + L     +     + +  + V + 
Sbjct: 353 LEIYQKTLELINPDTVFKKGYSYTSL-NGKSIM-GQKLKKGDELKTITANQEIKSKVESV 410

Query: 502 APPKE 506
              K+
Sbjct: 411 GKRKK 415


>gi|146301514|ref|YP_001196105.1| exodeoxyribonuclease VII [Flavobacterium johnsoniae UW101]
 gi|146155932|gb|ABQ06786.1| Exodeoxyribonuclease VII large subunit [Flavobacterium johnsoniae
           UW101]
          Length = 478

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 95/514 (18%), Positives = 188/514 (36%), Gaps = 83/514 (16%)

Query: 17  VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLK---DNHSRIDAII--- 68
           +S+L+  ++  + +        V  +I+ +         YF L    D  S I A I   
Sbjct: 9   LSQLNDQIQDTINARFKGQTYWVVADITNHSFKADKKIHYFELVEKSDKSSAITAKIMGK 68

Query: 69  -W-KGTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119
            W  G L  ++F    G         LV   +  F       + +  +  S   G L   
Sbjct: 69  SWGSGALRILDFESSTGQRFTNNLHVLVQVSVD-FHPLYGLSVNLLDIDSSFMLGILEQQ 127

Query: 120 LEKRKKKLLEEGLF---------SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-- 168
                ++L++E  F         +   +  +  + + +AVI+S + A   D    +    
Sbjct: 128 RNATLERLVKENDFIHKEGDGYSTLNSRLKLGAVIQRVAVISSSSSAGNEDFRHTMQHND 187

Query: 169 -RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227
             +  ++  +   VQGD   K   N ++++       T    D+I++ RGGGS  D   F
Sbjct: 188 FGYVFQIDDYHTVVQGDNNAKLFLNKLIEVY-----NTGIPYDVIVITRGGGSQSDFLIF 242

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           ++  I RA+A   IP+I+ IGH+ + ++ D  A     TPT AAE  +      +  ++ 
Sbjct: 243 DNYNIGRAVAKFPIPVITGIGHQKNISITDLMAHTHTKTPTKAAEFIIAHNRSFELGILA 302

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           L+  +     +L     N LNSL  A+ ++ + L                          
Sbjct: 303 LQKNIVIKSQQLFLQYHNELNSLKNAVAHNARKL-------------------------- 336

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
                             I   ++ ++  +QHI Q  +  L     +      +     +
Sbjct: 337 ------------------ISVQKEELMMARQHIVQTGRSLLNDKKQQLLLTAQLTLQRPQ 378

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
               +    +++++ L   ++   SH ++S    +    + ++  + ++ L RGY  ++ 
Sbjct: 379 GIIQQ---KNSNLRHLKANLKIFTSHYLRSRKLQLEDCRKTIKLLSPQHVLSRGYAVVRV 435

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
            +   I    ++    +I I   D    + V  K
Sbjct: 436 HD-KIINGAGSIQEGEQIEILLKDAILKSTVNEK 468


>gi|162453675|ref|YP_001616042.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So
           ce 56']
 gi|161164257|emb|CAN95562.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So
           ce 56']
          Length = 547

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 146/377 (38%), Gaps = 23/377 (6%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD----- 59
            + ++   +++VS+L+  ++  +E+     + + GE+ GY          F L +     
Sbjct: 106 PRPAVAASDFTVSKLNGQVRAALEAAFPASIWLVGEVCGYNRAAHKSIVGFELVERDALG 165

Query: 60  -NHSRIDAIIWKGTLNKI---------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
              +++ A +++    +I          F  E+ I+  V G++  +     Y+ +IE L 
Sbjct: 166 KEIAQVKATLFESARAEIERRLAAAGDPFQIEDEIQIRVRGRVELYVPWGSYRFLIEDLD 225

Query: 110 P-SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168
                G      E+  ++L EEGL       P P +P  + ++TS       D+L     
Sbjct: 226 VGYTLGEAARRREEICRRLAEEGLLDRNRSLPFPALPLRVGLVTSLGSDAYNDVLGTFRE 285

Query: 169 -RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227
             F  RV+   V+VQG +    + NA+               D++++ RGGGS  DL  F
Sbjct: 286 SGFAFRVVAHGVRVQGRQTEPSVLNALDYFRARAAE-----LDVLLICRGGGSRTDLAWF 340

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           + E I RA+A   +P++  IGHE D +  D+           AA +   V +       +
Sbjct: 341 DSEPIARAVATFPLPVVVGIGHERDISALDFVGFREKTPTAAAAMLVQRVSDARDEVESS 400

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           L + L+     L     +      +   ++   ++    +L    R+L       +    
Sbjct: 401 LLSILDQGRRVLRSASSDLTRRAARVPRSASLLIARRAGQLQEAVRQLRQGARRDLDAAS 460

Query: 348 RHFNHIINRIKSDFLIH 364
              + + + +       
Sbjct: 461 HRVDEMASLLGPRSSRR 477



 Score = 59.4 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/154 (9%), Positives = 41/154 (26%), Gaps = 22/154 (14%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q+      E +  +  I+ Q  R +     +       +       I      +++ + 
Sbjct: 387 VQRVSDARDEVESSLLSILDQGRRVLRSASSDLTRRAARVPRSASLLIARRAGQLQEAVR 446

Query: 426 RIEFILSHKIKSCHTSVSITTRIL----------------------QSFAYKNTLKRGYT 463
           ++       + +    V     +L                      +    +  ++RGY 
Sbjct: 447 QLRQGARRDLDAASHRVDEMASLLGPRSSRRLALESERLESRERRLRLLDPRRVVERGYA 506

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
            ++ T    +T        T ++     G     
Sbjct: 507 ILRTTEGAVLTDAARAPQGTTLIAELKRGVLRLR 540


>gi|330984147|gb|EGH82250.1| XseA, Exonuclease VII, large subunit [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 460

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 85/505 (16%), Positives = 166/505 (32%), Gaps = 72/505 (14%)

Query: 16  SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAII 68
            +S     +K  ++   S  V V  EI    G     H Y  L +  +      +   +I
Sbjct: 6   PLSAFLGQVKVTLKERFSAGVWVTAEILSMSGGA---HRYLELVEYDADRRQIAKATGVI 62

Query: 69  WKGTLNKI-EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTAL 120
           WK     + +F    G      ++ L             + ++IE + P+   G +   +
Sbjct: 63  WKSATGMLEKFKVATGNALQADMKVLCRVSPKFHESYG-FSLVIEEIDPTYTLGDMELRI 121

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL---RVIIF 177
           +  +  L E+G+     K   P     +AVI     A + D          L       +
Sbjct: 122 KAIRDFLSEKGVIQSNRKLAKPQDFFRLAVIAPADAAGLGDFRTEADRIGALGLCEFTYY 181

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
               QG+    +I  A+ Q+            D +++ RGGG    L+  N + +  A+ 
Sbjct: 182 HASFQGETAGDQIVEAMAQVVAAHRVNP---YDALVIIRGGGDKAGLYQLNHKRLCHAVC 238

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
              +P++  IGH+ D  L D  A+LR PTP+              ++  +    L+    
Sbjct: 239 RVPLPVLIGIGHDRDRLLLDELANLRFPTPSLVISHIKETMISNANAGHDAFEALDRAAE 298

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            ++             L   DQ    +   L+R  +      E ++ R  +         
Sbjct: 299 SVLAGAEEHS------LRLLDQLHQSAHQVLERAEQGQVRVYEALLSRAEQKIGEAEQV- 351

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                              ++ +E++V    R           ++  +   ++  +    
Sbjct: 352 ------------------SERSLEKLVDHGDRLADQAADTSAKLVGQVFSDSEKLLDQAE 393

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
            H K+LIT +                              + +GY  ++++   FIT+K 
Sbjct: 394 AHAKQLITEVMSA----------------------NPLAIMAQGYGYVKNSAGQFITRKA 431

Query: 478 NLATKTRILINFFDGQANAIVINKA 502
                  + I   DG+ +A+V ++ 
Sbjct: 432 KALAGDTLTITLQDGKFDAVVTSEQ 456


>gi|111225493|ref|YP_716287.1| exodeoxyribonuclease VII large subunit [Frankia alni ACN14a]
 gi|111153025|emb|CAJ64772.1| exodeoxyribonuclease VII large subunit (Exonuclease VII large
           subunit) [Frankia alni ACN14a]
          Length = 346

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 9/309 (2%)

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122
            +     +   + +     +G   +V GK +  PG     + +  + P G+G LL  LE+
Sbjct: 2   SLRVTCPRAVCDAVGPALVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLEQ 61

Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181
            K  L  EGLF+   K   PF+P  + +IT    A  RD+++    R+P +R+++  V V
Sbjct: 62  LKATLAAEGLFAASRKRRPPFLPAAVGLITGRASAAERDVVENARRRWPAVRIVLREVAV 121

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
           QG     ++ +A      L+E    P  ++I++ARGGGS+EDL  F+DE ++RA+  +  
Sbjct: 122 QGPLAVSQVIDA------LRELDGRPEVEVIVIARGGGSLEDLLPFSDEALLRAVVAART 175

Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           P++SAIGHE D  L D+ AD+RA TPT AA+  VP      +++  L  R   ++   + 
Sbjct: 176 PVVSAIGHEQDAPLLDFVADVRASTPTDAAKRVVPDVGEQTAAVAQLRGRARRVVEHRLD 235

Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L  +     L    + L+     +  L       +   +    R       R+++
Sbjct: 236 REERRLADMRGRPVLAAPARDLARRSDDVAALLARSRRCVHHALDVTGRDLVATRARVRA 295

Query: 360 DFLIHNIQK 368
                 + +
Sbjct: 296 LSPAATLDR 304



 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 1/132 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           Q     Q           R    E++        +       +      +  L+ R    
Sbjct: 215 QTAAVAQLRGRARRVVEHRLDREERRLADMRGRPVLAAPARDLARRSDDVAALLARSRRC 274

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489
           + H +      +  T   +++ +   TL RGY   Q   +   +     +    R+ I  
Sbjct: 275 VHHALDVTGRDLVATRARVRALSPAATLDRGYAVAQRAADGAVVRDPAEVGPGERLTIRV 334

Query: 490 FDGQANAIVINK 501
             G   A V ++
Sbjct: 335 AGGAFPAAVTDE 346


>gi|229552485|ref|ZP_04441210.1| possible exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1]
 gi|229314037|gb|EEN80010.1| possible exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1]
          Length = 155

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/155 (41%), Positives = 104/155 (67%), Gaps = 5/155 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68
                +V+ L+ +LK   +++  L+ V + GEIS YR     G+ YFSLKD+H++I A++
Sbjct: 4   TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61

Query: 69  WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128
           ++   +K++F  EEG++ LV+G+++ +  S +Y++I+E L P G G L  A E+ KKKL 
Sbjct: 62  FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163
            EGLF   H+ P+P  P+ +AV+TSP+GAVI+DI+
Sbjct: 122 AEGLFER-HQRPLPLFPQRVAVVTSPSGAVIQDII 155


>gi|239617914|ref|YP_002941236.1| Exodeoxyribonuclease VII [Kosmotoga olearia TBF 19.5.1]
 gi|239506745|gb|ACR80232.1| Exodeoxyribonuclease VII [Kosmotoga olearia TBF 19.5.1]
          Length = 509

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/432 (19%), Positives = 161/432 (37%), Gaps = 17/432 (3%)

Query: 82  EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF---SDQHK 138
           EG  + VIGK+      ++Y + +  + P G G +    +K  +KL  EGL+        
Sbjct: 86  EGELYSVIGKLVFRVTQNRYVVEVIKIEPYGKGAIEKRRQKILEKLRSEGLYPVKQLSSL 145

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIANAILQL 197
             +      IA++ SP    + D L+ +     +     +P+ ++G    KE+ +A+ + 
Sbjct: 146 LELGEPILDIAILASPNTRGLSDFLRMLQDSPLIPDFTYYPISIEGASAAKELVSALGKA 205

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
           N            +I++ RGGG+   L + +DE + RA+A+S +P+I  IGH  D TL D
Sbjct: 206 NNRAHQ-------LIVIVRGGGAQGGLLYLDDESLARAVASSKLPVIVGIGHSEDKTLLD 258

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           Y A +   TPT        +      SL  LE +L+++   L+   ++ + S  + L   
Sbjct: 259 YVASMSFETPTAVGREISQINRDYIHSLSELEEKLDSVFSELLSSFVSNIQSRSRILSAY 318

Query: 318 DQTLSCSRYRLDRLPRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
                        L      + ++ +        N     + S+      +K +   L  
Sbjct: 319 SIERMIKFDHQKLLSFVRRLNRIDFLTDNMKEALNRSRKNLISNSANIMNEKTKWFWLNL 378

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++      ++H   +    K     +       +  +       KKL            +
Sbjct: 379 KE-----FRRHENELSSRIKNFEERITPEIIDLERFLMEKSRDFKKLTGYFSSNAKSFYR 433

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
                +      ++S      L +G   + D     I    ++     +LI   DG   +
Sbjct: 434 WQRERLQRYIAEIRSINPIYALVKGGAIVMDEEGKAIVSIEDVKIGDEVLIRLSDGSLRS 493

Query: 497 IVINKAPPKEQP 508
            ++ K   K++ 
Sbjct: 494 EILEKITTKKKN 505


>gi|90019847|ref|YP_525674.1| exodeoxyribonuclease VII large subunit [Saccharophagus degradans
           2-40]
 gi|89949447|gb|ABD79462.1| Exodeoxyribonuclease VII large subunit [Saccharophagus degradans
           2-40]
          Length = 555

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 85/537 (15%), Positives = 167/537 (31%), Gaps = 63/537 (11%)

Query: 22  YHLKHIVESNLS-HVCVRGEISGYRGIHSSG-HAYFSLK--DNH--SRIDAIIWKGTL-- 73
             +   +++ L     VR EI   +   S G H    L   D    ++  A IW   +  
Sbjct: 19  NRIGTALKTQLPGSYWVRAEI--LKADTSKGNHLSLELASYDGSQGAKARAWIWSSNINI 76

Query: 74  -----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKL 127
                       + G++ L   ++   P      +++E++ P    G +   L+  +++L
Sbjct: 77  VSSFEQSTGSSLKAGLKILFQCRVQFHPEFG-LSLVVENIDPKFTLGDMEAKLQAIRERL 135

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQGD 184
                 +       P     +AV++  + A + D              +   +P   QG 
Sbjct: 136 TSLNEINRNRYLDKPKDFCRVAVVSPESAAGLGDFKTIADRLEKYNLCKFNYYPSLFQGA 195

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
                I +AI Q+    E     + D + + RGGG    L+  N+  I R I  S IP++
Sbjct: 196 NAVASIVSAISQVVVDIENG--NQYDALAIVRGGGDKAGLYQLNEIKIARCICRSPIPVL 253

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
             IGHE D T+ D  A+ R  TP+  A                    L      +  +  
Sbjct: 254 VGIGHERDSTILDEVANCRLATPSLVASFIQEAIVKNARDAKFNYELLVRSSQSISSFAK 313

Query: 305 NTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN------------ 351
             L      +     + L  +R ++      L H   ++I    R               
Sbjct: 314 QELRDYRANISLLSHKKLESARRQVTEHNTSLTHVPNLLIQNAKRQNEENYINIKLFSGR 373

Query: 352 --HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
                  + S+     I   + +I     HI+Q+    +R          + +     Q 
Sbjct: 374 SIQQAKELVSESFRSAINDTKVNIRSIGSHIQQLKIDVIRRAHHSTSTAKSSVQHYNIQM 433

Query: 410 KN--------------------------RIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
           +                            +      I+     +    +  + +  + + 
Sbjct: 434 RQGASNSAHQAKSSVLYKYEESLKATKYYLGQQRNAIENESKSLRVNAAQSLTAIKSDIK 493

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           I    +        L +G+  I       +T K+++  +  + +   DG   A ++ 
Sbjct: 494 ILVERVLLLDPSKILAKGFALIMSNEKKVLTTKKDVLKQKNVSLRLKDGFVEAHILE 550


>gi|313205289|ref|YP_004043946.1| exonuclease vii, large subunit [Paludibacter propionicigenes WB4]
 gi|312444605|gb|ADQ80961.1| Exonuclease VII, large subunit [Paludibacter propionicigenes WB4]
          Length = 409

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 159/391 (40%), Gaps = 28/391 (7%)

Query: 16  SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAI 67
           ++SEL+  ++  +  N      +R EIS  R     GH Y  L  KD+      ++I   
Sbjct: 5   TLSELAAQIQQTIRLNFDTPQWIRAEISELRENPG-GHCYLELIEKDSESDALLAKIKTT 63

Query: 68  IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118
           IW  T   ++         +   GI  LV   +  F G   + + +  + P+   G +  
Sbjct: 64  IWASTYRMLKPYFESSTGQVLRSGINVLVAVTVE-FHGVYGFSLNVRDIDPTFTIGEMAA 122

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175
              K  ++L  +G+     + P+  +P+ +A+I+S T A   D   ++      F   + 
Sbjct: 123 RRLKIIRQLESDGIVDMNKQLPLSQVPQRLAIISSATAAGYGDFCDQLKNNPAHFTFYIK 182

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +FP  +QGD+    I  A+ ++    E       D +I+ RGGG+  DL  F+   +   
Sbjct: 183 LFPAVMQGDQAEATIIAALEKIYDNLEM-----FDAVIIIRGGGATTDLACFDSYELALN 237

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
            A   +PII+ IGH+ D ++ D  A     TPT  AE  +         + ++ + +  +
Sbjct: 238 CAQFPLPIIAGIGHQRDVSILDMVAHTSLKTPTAVAEFLISKMHTADDYVNSVVSDIGFL 297

Query: 296 IIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
           +   I+ +   +      +       +   ++ LD     L+ ++ + + ++    + + 
Sbjct: 298 VRNNIETESRFIIQTQLQIKQTLRSWVLKKKHLLDGQKNRLKSSVRMQLLKQNNKLSLLD 357

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
             I++   +  ++          + +  I +
Sbjct: 358 KNIETHSPVFLLKHGYTITTLNGKRVTSINQ 388



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 45/111 (40%), Gaps = 1/111 (0%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
             I  E +  I     +++  ++ +      +     R++  +  ++   +  +S+  + 
Sbjct: 300 NNIETESRFIIQTQLQIKQTLRSWVLKKKHLLDGQKNRLKSSVRMQLLKQNNKLSLLDKN 359

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           +++ +    LK GYT     N   +T    + +  +I     +GQ ++ +I
Sbjct: 360 IETHSPVFLLKHGYTITTL-NGKRVTSINQIKSGDKIRTLLSNGQFDSEII 409


>gi|28493610|ref|NP_787771.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei str.
           Twist]
 gi|28572806|ref|NP_789586.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei
           TW08/27]
 gi|81839118|sp|Q83FR7|EX7L_TROWT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|81839161|sp|Q83HE6|EX7L_TROW8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|28410939|emb|CAD67324.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei
           TW08/27]
 gi|28476652|gb|AAO44740.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei str.
           Twist]
          Length = 404

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 158/375 (42%), Gaps = 32/375 (8%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           VS ++  L  ++   L    + GE++           + +LKD        +       +
Sbjct: 23  VSHITGRLSSLL-GELPATWIEGEVTQLSPRRIG--VFLTLKD--------M--NESKHL 69

Query: 77  EFLP---------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           EF           E G    + GK+  +  S + ++    +   G G L+  + + + +L
Sbjct: 70  EFFLPFDAFKDEVEVGNRVKIHGKLEFWATSGQIKVKGFEIQSVGIGELIERIARLRVQL 129

Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186
             EGL+  +    +PFIPK+I ++T       +D++  +  R+P  +       +QG  C
Sbjct: 130 ALEGLYEHKRP--LPFIPKLIGLVTGQNSDAEKDVVTNVLLRWPAAKFCTIYASMQGASC 187

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
             E  +AI +L+           D+II+ARGGGS  DL  F+DE ++RA+     P+ISA
Sbjct: 188 VSETISAIQKLDA------NNDVDVIIVARGGGSFHDLIGFSDEQMIRAVFAIKTPLISA 241

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGHE D  + D  ADLRA TPT AA+  VP     +  + +  + L      +I      
Sbjct: 242 IGHEADRPILDEVADLRASTPTDAAKRVVPDIADEKRLIKSAMSFLKKSYEPVIDKIKCD 301

Query: 307 LNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
             S  +A  N  +  ++  R  +D   +++   +     +       I   + +    + 
Sbjct: 302 TLSWSQAFSNPFETFIAPRRREIDLFYQQMLTVVWANFSKTETEIAAIKKHLLAISPQNT 361

Query: 366 IQKNRQHILEKQQHI 380
           + +    I ++   I
Sbjct: 362 LVRGYAMIEDETGRI 376



 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%)

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           I      I     ++  ++        T ++   + L + + +NTL RGY  I+D     
Sbjct: 317 IAPRRREIDLFYQQMLTVVWANFSKTETEIAAIKKHLLAISPQNTLVRGYAMIEDETGRI 376

Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500
           I+    L+    + +   DG   A +  
Sbjct: 377 ISSADKLSAGDTVTLRLHDGLVRAEITQ 404


>gi|213024009|ref|ZP_03338456.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 118

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 1/117 (0%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L    E+ K
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQTK 118


>gi|294614727|ref|ZP_06694629.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636]
 gi|291592465|gb|EFF24072.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636]
          Length = 207

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 82/126 (65%), Gaps = 3/126 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +     +V+ L+ +LK   +++  L  V + GEIS +R   ++ H YFSLKD+H++I AI
Sbjct: 1   MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++KG   K+ F P+EG++ LV+G+I+ +     YQI +E + P G G L   LE+RK+KL
Sbjct: 60  MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119

Query: 128 LEEGLF 133
           ++EGLF
Sbjct: 120 MKEGLF 125


>gi|329121104|ref|ZP_08249735.1| exodeoxyribonuclease VII large subunit [Dialister micraerophilus
           DSM 19965]
 gi|327471266|gb|EGF16720.1| exodeoxyribonuclease VII large subunit [Dialister micraerophilus
           DSM 19965]
          Length = 353

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 11/307 (3%)

Query: 13  PEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             Y+V+E S  +   ++ N    ++ V G +S  R  H SG+ YFSL D   +I   I  
Sbjct: 2   KVYTVNECSEIISESIKKNYLNKNINVEGTVSSLRE-HFSGNCYFSLIDESYKISCKINH 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGS-SKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
             L+ ++   + G + ++ G I  +     K  ++ E +I SG   +    EK  K+L E
Sbjct: 61  MHLSFVKRKLKSGEKVIISGNI-LYDKYFGKPLLLAERVIVSGKSQIQIEKEKLFKELEE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           +G FS   K  +P    I+ +ITS +GAV+ DI++    R   +   I+   VQG++   
Sbjct: 120 KGYFSVYSKKALPEYVFIVGIITSKSGAVVHDIIKTGRLRNKNVSYYIYNSAVQGEKAAL 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
            ++  I   N      +  +PD++I+ARGGGS ED   FN+ +++ A+ NS IP++SAIG
Sbjct: 180 GMSKMIKLANK-----SDVKPDVLIIARGGGSEEDFKPFNERILLDAVYNSEIPVVSAIG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D  L D  AD RA TPT AAE+ V  ++ L S +      L  +    ++ K +   
Sbjct: 235 HEVDDVLLDMVADYRASTPTQAAELVVEEEKVLYSKIEFQLNCLKQVFKFKMENKKSYFI 294

Query: 309 SLLKALP 315
             L  L 
Sbjct: 295 INLYKLR 301


>gi|255318729|ref|ZP_05359956.1| exodeoxyribonuclease 7 large subunit [Acinetobacter radioresistens
           SK82]
 gi|262378091|ref|ZP_06071248.1| exodeoxyribonuclease VII, large subunit [Acinetobacter
           radioresistens SH164]
 gi|255304227|gb|EET83417.1| exodeoxyribonuclease 7 large subunit [Acinetobacter radioresistens
           SK82]
 gi|262299376|gb|EEY87288.1| exodeoxyribonuclease VII, large subunit [Acinetobacter
           radioresistens SH164]
          Length = 421

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 140/380 (36%), Gaps = 24/380 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------- 61
           +  P+ S+SE    ++ I++      V VR EI         GH Y  L +         
Sbjct: 1   MADPQLSLSEYLSGVQEIIQLTFDESVWVRAEIRNLNIK--GGHYYLELAEKEQQSDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK +     ++F  E GIE       L+  K   F     + + IE +  S  
Sbjct: 59  ASCRATIWKFSAANIVLKFERESGIELSKDLNVLIKVKAR-FDPQYGFSVNIEDIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL     +   PF  + + VI     A + D       +   
Sbjct: 118 LGDIARQYQQLVERLTQEGLIERNRQLVTPFDIQHVLVIAPQQAAGLGDFKKDADVLQKY 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                I      QG   PK I  A+              PD+I++ RGGG++ DL + ND
Sbjct: 178 GVCNFIYQTATFQGQTAPKSIIEALRSALKHWANDFNYPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   S+P+   IGHE D T+ D  A     TP+                + N  
Sbjct: 238 YELAALLCKRSVPVWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNTISENVQQVQNTF 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            R+  +    +    +  +  ++ +       LS S   LD L   +    +  + +  +
Sbjct: 298 QRIKTLSQYQLMVYQSQNDQYMRLIRTLSHSQLSESAKTLDVLKDVVHCCAQQQVRQTKQ 357

Query: 349 HFNHIINRIKSDFLIHNIQK 368
           H + ++  I      H + K
Sbjct: 358 HIDSLLKEILLQNPRHILNK 377



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 14/132 (10%), Positives = 50/132 (37%), Gaps = 1/132 (0%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +++ + Q   ++I       + + + +    + ++R  + +++      +  L   +   
Sbjct: 288 ENVQQVQNTFQRIKTLSQYQLMVYQSQNDQYMRLIRTLSHSQLSESAKTLDVLKDVVHCC 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              +++     +    + +     ++ L +GY  ++  N   I   + L     I +   
Sbjct: 348 AQQQVRQTKQHIDSLLKEILLQNPRHILNKGYAIVRY-NGRAIRSVQQLNVIQNIQLELQ 406

Query: 491 DGQANAIVINKA 502
           DG+  A ++  +
Sbjct: 407 DGKIQAEIVKGS 418


>gi|288930020|ref|ZP_06423861.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288328679|gb|EFC67269.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 432

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 143/384 (37%), Gaps = 28/384 (7%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66
            ++ EL+  ++  +   +     V  EIS  R I   GH Y  L  KD       ++  A
Sbjct: 6   LTLYELNQMVRDALAITMPDEYWVEAEISEMREIR--GHCYMELVQKDAAGNTPVAKASA 63

Query: 67  IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
             WK     +              G++  ++           +  I+  + P+   G + 
Sbjct: 64  KCWKNKWAFLRPHFERNANQILRAGLKVRLLVYADFHEAYG-FSWIVADIDPTYTLGDMA 122

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174
               +  + L ++G+F  Q    +P   + +AVI+S   A   D  + +          V
Sbjct: 123 RKRLEIVQTLKQQGVFDLQKDFRLPLFAQRVAVISSEQAAGYGDFCRHLHENEWHLQFSV 182

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +F   +QG+   + +  A+  +N           D++++ RGGG+  DL  F+   +  
Sbjct: 183 QLFAATMQGEGVERSVIAALNAINERLAD-----FDVVVIIRGGGATSDLSGFDSLPLAE 237

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
            +AN  +PII+ IGH+ D ++ D  +  R  TPT AA   V         +++ +  + +
Sbjct: 238 NVANFPLPIITGIGHDRDESVLDMVSFRRVKTPTAAAAFLVEHLAETYQRILDAQEEMVH 297

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
           ++ R ++ +   L  L + +P     +   + +          N      ++       +
Sbjct: 298 LVQRRMELERIQLARLTEKVPMLFSLVRTRQEKRLENLALRMQNTITTTLQRQDLRLQRL 357

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQ 378
                      + K    +   QQ
Sbjct: 358 ALALPTHAERLLTKAAHRLELLQQ 381



 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 13/150 (8%), Positives = 49/150 (32%), Gaps = 3/150 (2%)

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQ- 408
                 + +   + ++ + R  +   Q   + + V      +   +++++  L +  +  
Sbjct: 283 ETYQRILDAQEEMVHLVQRRMELERIQLARLTEKVPMLFSLVRTRQEKRLENLALRMQNT 342

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468
               +      +++L   +       +      + +  + ++S      L +GY+     
Sbjct: 343 ITTTLQRQDLRLQRLALALPTHAERLLTKAAHRLELLQQAVKSHDPSLLLAKGYSITTR- 401

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498
               +    +L     I+     G+  ++V
Sbjct: 402 GGKVVRNANDLQKGDVIVTQLQKGKVKSVV 431


>gi|313891740|ref|ZP_07825345.1| Exonuclease VII, large subunit [Dialister microaerophilus UPII
           345-E]
 gi|313119734|gb|EFR42921.1| Exonuclease VII, large subunit [Dialister microaerophilus UPII
           345-E]
          Length = 353

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 11/307 (3%)

Query: 13  PEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
             Y+V+E S  +   ++ N    ++ V G +S  R  H SG+ YFSL D   +I   I  
Sbjct: 2   KVYTVNECSEIISESIKKNYLNKNINVEGTVSSLRE-HFSGNCYFSLIDESYKISCKINH 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGS-SKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
             L+ ++   + G + ++ G I  +     K  ++ E +I SG   +    EK  K+L E
Sbjct: 61  MHLSFVKRKLKSGEKVIISGNI-LYDKYFGKPLLLAERVIVSGKSQIQIEKEKLFKELEE 119

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188
           +G FS   K  +P    I+ +ITS +GAV+ DI++    R   +   I+   VQG++   
Sbjct: 120 KGYFSVYSKKALPEYVFIVGIITSKSGAVVHDIIKTGRLRNKNVSYYIYNSAVQGEKAAL 179

Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248
           E++  I   N      +  +PD++I+ARGGG+ ED   FN+ +++ A+ NS IP++SAIG
Sbjct: 180 EMSKMIKLANK-----SDVKPDVLIIARGGGAEEDFKPFNERILLDAVYNSEIPVVSAIG 234

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           HE D  L D  AD RA TPT AAE+ V  ++ L S +      L  +    ++ K +   
Sbjct: 235 HEVDDVLLDMVADYRASTPTQAAELVVEEEKVLYSKIEFQLNCLKQVFKFKMENKKSDFI 294

Query: 309 SLLKALP 315
             L  L 
Sbjct: 295 INLYKLR 301


>gi|315609100|ref|ZP_07884069.1| exodeoxyribonuclease VII large subunit [Prevotella buccae ATCC
           33574]
 gi|315249170|gb|EFU29190.1| exodeoxyribonuclease VII large subunit [Prevotella buccae ATCC
           33574]
          Length = 435

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 79/418 (18%), Positives = 161/418 (38%), Gaps = 30/418 (7%)

Query: 13  PEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRI 64
              S+ EL+  ++  +E ++     V+ E+S  R  +  GH Y  L  KD       +R 
Sbjct: 6   KPLSLYELNALVRETIEVDMPDSYWVQAELSDVRESY--GHCYMELIQKDEASRTPIARA 63

Query: 65  DAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
            A  W+     I              G++ ++            +  I++ +  +   G 
Sbjct: 64  RANCWRNRWMLIRPAFERLTGQGLRSGMKVMLQVHAQFHENFG-FSWIVDDIDATYTMGD 122

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPL 172
           +    ++   +L  EG+F  Q +  +P   + +AV++S + A   D   ++      F  
Sbjct: 123 MARRRQEIIARLRAEGVFDLQKELRLPLFTQRVAVVSSASAAGYGDFADQLAANDYGFCF 182

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
              +F   +QG++  + +  A+  +N           D++++ RGGG+  DL  F+   +
Sbjct: 183 HTELFAATMQGEQVEQSVIAALDAINARA-----GEFDVVVIIRGGGATSDLSGFDTLAL 237

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
              +AN  +P+I+ IGHE D ++ D  A  R  TPT AA   V     +++ +     R+
Sbjct: 238 AENVANFPLPVITGIGHERDESVLDMVAHTRVKTPTAAAAFLVARLADVEARIDGAGERM 297

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFN 351
             ++   ++ +   ++ L  A+P     +      RL+ L   L   ++  + R      
Sbjct: 298 VRVVRLRMERERMRIDKLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQ 357

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +   ++   L   +Q     +    Q +E +    L             +     Q 
Sbjct: 358 LVGRDLQP-LLERRLQTETHRLALLGQRVEALNPDRLLRRGYSITLHEGRVVRDPRQL 414



 Score = 87.1 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 45/123 (36%), Gaps = 2/123 (1%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKS 437
            +   +      +    + ++ +L     Q   NR+      ++ +   ++ +L  ++++
Sbjct: 314 KLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQLVGRDLQPLLERRLQT 373

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               +++  + +++      L+RGY+         +   R L+    I      G   + 
Sbjct: 374 ETHRLALLGQRVEALNPDRLLRRGYSITLHE-GRVVRDPRQLSAGDMIETRLEKGILKSR 432

Query: 498 VIN 500
           + +
Sbjct: 433 IES 435


>gi|323344544|ref|ZP_08084769.1| exodeoxyribonuclease VII large subunit [Prevotella oralis ATCC
           33269]
 gi|323094671|gb|EFZ37247.1| exodeoxyribonuclease VII large subunit [Prevotella oralis ATCC
           33269]
          Length = 461

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 154/385 (40%), Gaps = 30/385 (7%)

Query: 16  SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDN-----HSRIDAI 67
           ++ EL+  +   + +++     V  E++    +   GH Y  L  K+       ++  A 
Sbjct: 33  TLYELNQLVSDTIAASMPDEYWVEAELAEIHEVR--GHCYMELIQKEPFSNTPVAKATAK 90

Query: 68  IWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118
            WK    +I    E         G++ ++            +  I+  + P+   G +  
Sbjct: 91  CWKTKWMQIRPHFERITKQRMHAGLKIMLKVHADFHAAYG-FAWIVTDIDPAYTMGDMAR 149

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175
             ++    L  EG+F  Q +  +    + IAV++S   A   D   ++ C        + 
Sbjct: 150 KRQEIITVLKREGVFELQKELVLGMFAQRIAVVSSANAAGYGDFCNQLECNEYGLHFDIE 209

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
           +F   +QG++  + I  A+  +N   +       D++++ RGGG+  DL  F+   +   
Sbjct: 210 LFQAVMQGEQVEQSIIAALNAINERIDD-----FDVVVIIRGGGATSDLSGFDTLALAEN 264

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           +AN  +PII+ IGHE D ++ D  +  R  TPT AA   +     + + + +  +++ + 
Sbjct: 265 VANFPLPIITGIGHERDESVLDMVSYARVKTPTAAAAYLIGHLAEVLARVEDARSQIVSY 324

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
           + R ++++   LN+L   +P     +      RL+ L       +   +  +  H + + 
Sbjct: 325 VRRRMEHEKLRLNALSNKIPILFSAVKVSQTARLNSLFMRTVSAMNRHLTAEKHHLDMLS 384

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQH 379
             +    +   I      +    Q 
Sbjct: 385 AALFP-SVRRRITAEYHRLEMLVQR 408



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 2/138 (1%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYLHTHIKKLI 424
           +++  +H   +   +   +      + + +  ++  L M      NR +     H+  L 
Sbjct: 325 VRRRMEHEKLRLNALSNKIPILFSAVKVSQTARLNSLFMRTVSAMNRHLTAEKHHLDMLS 384

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
             +   +  +I + +  + +  +   +      L++GY+     N   +   R+L     
Sbjct: 385 AALFPSVRRRITAEYHRLEMLVQRTDAVNPDILLRKGYSITLH-NGKLLRDVRSLRVGDE 443

Query: 485 ILINFFDGQANAIVINKA 502
           I      G   ++V  + 
Sbjct: 444 IETKVEHGSVRSVVKAEE 461


>gi|144897278|emb|CAM74142.1| exodeoxyribonuclease 7 large subunit [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 311

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 29/339 (8%)

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +A+ +   NTL      PRPD++I+ARGGGS+EDLW FN+E++VRA A S+IP+ISA+GH
Sbjct: 1   MASRLAGFNTL-PANGVPRPDVLIVARGGGSVEDLWAFNEEVVVRAAAASAIPLISAVGH 59

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           ETD TL D+A+DLRAPTPT AAEMAVPV+  L +++ +  ARL     R ++ + N +  
Sbjct: 60  ETDTTLIDFASDLRAPTPTAAAEMAVPVRAELVATVADCAARLVGSTARGLEDRRNRVQH 119

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L +ALPN  + L  +  +LD     L+  L  ++ R++   +    +++       +   
Sbjct: 120 LARALPNPRRVLDDAGLKLDDRAERLKLALPNLLHRRHADLDRSAAQLR--HPRELLAAK 177

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
              +      +   +K  +                  +  K+R       +++   R+  
Sbjct: 178 THQLDSLSTRLTHAIKSAV------------------QAEKSRQEKHSLRLEQTGQRLAP 219

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
            ++  +      +  + ++L+S++YKN L RG+  I+D     +    +        I F
Sbjct: 220 AVTRLLAEQARRLDASAKLLESYSYKNVLDRGFAVIRDDAGKLV-SAADAQAGAAWSIEF 278

Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            DG  + +V   APP     KK +           QG L
Sbjct: 279 KDGTTDVVVGANAPPAPPRPKKGK-------DDVRQGSL 310


>gi|288927146|ref|ZP_06421030.1| exodeoxyribonuclease VII, large subunit [Prevotella buccae D17]
 gi|288336083|gb|EFC74480.1| exodeoxyribonuclease VII, large subunit [Prevotella buccae D17]
          Length = 435

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/418 (18%), Positives = 162/418 (38%), Gaps = 30/418 (7%)

Query: 13  PEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRI 64
              S+ EL+  ++  +E ++     V+ E+S  R  +  GH Y  L  KD       +R 
Sbjct: 6   KPLSLYELNALVRETIEVDMPDSYWVQAELSDVRESY--GHCYMELIQKDEASRTPIARA 63

Query: 65  DAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
            A  W+     I              G++ ++            +  I++ +  +   G 
Sbjct: 64  RANCWRNRWMLIRPAFERLTGQGLRSGMKVMLQVHAQFHENFG-FSWIVDDIDATYTMGD 122

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPL 172
           +    ++   +L  EG+F  Q +  +P   + +AV++S + A   D   ++      F  
Sbjct: 123 MARRRQEIIAQLRAEGVFDLQKELRLPLFTQRVAVVSSASAAGYGDFADQLAANDYGFRF 182

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
              +F   +QG++  + +  A+  +N           D++++ RGGG+  DL  F+   +
Sbjct: 183 HTELFAATMQGEQVEQSVIAALDAINARA-----GEFDVVVIIRGGGATSDLSGFDTLAL 237

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
              +AN  +P+I+ IGHE D ++ D  A  R  TPT AA   V     +++ +     R+
Sbjct: 238 AENVANFPLPVITGIGHERDESVLDMVAHTRVKTPTAAAAFLVARLADVEARIDGAGERM 297

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFN 351
             ++   ++ +   ++ L  A+P     +      RL+ L   L   ++  + R      
Sbjct: 298 VRVVRLRMERERMRIDKLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQ 357

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            +   ++   L   +Q     +    Q +E +    L             +    +Q 
Sbjct: 358 LVGRDLQP-LLERRLQAETHRLALLGQRVEALNPDRLLRRGYSITLHEGRVVRDPQQL 414



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 45/123 (36%), Gaps = 2/123 (1%)

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKS 437
            +   +      +    + ++ +L     Q   NR+      ++ +   ++ +L  ++++
Sbjct: 314 KLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQLVGRDLQPLLERRLQA 373

Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
               +++  + +++      L+RGY+         +   + L+    I      G   + 
Sbjct: 374 ETHRLALLGQRVEALNPDRLLRRGYSITLHE-GRVVRDPQQLSAGDMIETRLEKGILKSR 432

Query: 498 VIN 500
           + +
Sbjct: 433 IES 435


>gi|298480215|ref|ZP_06998413.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D22]
 gi|298273496|gb|EFI15059.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D22]
          Length = 414

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 24  LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75
           ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   +IW      
Sbjct: 17  VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 75

Query: 76  IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126
           ++   EE        GI+ LV   +        Y + +  + P+   G +     +   +
Sbjct: 76  LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 134

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183
           L EEG+ +   +  +P +P+ +AVI+S T A   D   ++            +FP  +QG
Sbjct: 135 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 194

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  A A   +PI
Sbjct: 195 NQVEESVLVALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 249

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  RL      L++ +
Sbjct: 250 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 309

Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +  RI     
Sbjct: 310 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 369

Query: 363 IHNIQK 368
              + +
Sbjct: 370 DKLLSR 375



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    ++Q        +  E++   A+   +      ++      +
Sbjct: 279 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 335

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 336 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394

Query: 481 TKTRILINFFDGQANAIV 498
              R+      G+  ++V
Sbjct: 395 PGDRLTTRLLKGEVQSVV 412


>gi|237714363|ref|ZP_04544844.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D1]
 gi|262408195|ref|ZP_06084742.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_22]
 gi|229445527|gb|EEO51318.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D1]
 gi|262353747|gb|EEZ02840.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_22]
          Length = 414

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 24  LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75
           ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   +IW      
Sbjct: 17  VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 75

Query: 76  IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126
           ++   EE        GI+ LV   +        Y + +  + P+   G +     +   +
Sbjct: 76  LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMALRRREILLQ 134

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183
           L EEG+ +   +  +P +P+ +AVI+S T A   D   ++            +FP  +QG
Sbjct: 135 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 194

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  A A   +PI
Sbjct: 195 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 249

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  RL      L++ +
Sbjct: 250 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 309

Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +  RI     
Sbjct: 310 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 369

Query: 363 IHNIQK 368
              + +
Sbjct: 370 DKLLSR 375



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    ++Q        +  E++   A+   +      ++      +
Sbjct: 279 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 335

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 336 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394

Query: 481 TKTRILINFFDGQANAIV 498
              R+      G+  ++V
Sbjct: 395 PGDRLTTRLLKGEVQSVV 412


>gi|294650170|ref|ZP_06727547.1| exodeoxyribonuclease VII large subunit [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292823940|gb|EFF82766.1| exodeoxyribonuclease VII large subunit [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 420

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 147/397 (37%), Gaps = 24/397 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+S+    ++ +++   +  V V+ EI         GH Y  L  KD       
Sbjct: 1   MSEPQFSLSDYLSTVQEVIQITFNEPVWVKAEIRNLNIK--GGHYYLELAEKDESTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPS-G 112
           +     IWK    K  ++F  E GIE       LV  +   F     + + +E +  S  
Sbjct: 59  ASCKGTIWKFIAQKMVLKFERESGIELSKDLNVLVKVRAK-FDPQYGFSVNVEDIDSSYT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L  EGL +     P PF  + + VI     A + D       +   
Sbjct: 118 LGDIARRYQQILERLTSEGLLNKNKLIPTPFDIQNVLVIAPENAAGLGDFKKDADALEKS 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                  +    QG+   + I  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 GVCHFKYYSATFQGNTAAQSIITSLSNGLREWATDFNTPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +A  ++PI   IGHE D T+ D  A+    TP+        +       +++  
Sbjct: 238 YELAALLAKRTVPIWVGIGHEKDRTILDEVANRSFDTPSKVIGGIRNLIADRTQDVLDSF 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  +  ++ +       ++ +   +D +   L +  +  I     
Sbjct: 298 QTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLAQQQIKLATN 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               ++         + + K    +  + + I  I +
Sbjct: 358 QVESLMRETLIQNPRNVMAKGYGIVRNEGKAIRSIQQ 394



 Score = 80.6 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 6/132 (4%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
              +     + I       I   + +    + M++     +I   +  +  + + + ++ 
Sbjct: 289 RTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLA 348

Query: 432 SHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
             +IK     V    R  ++     +N + +GY  +++     I   + ++   ++ +  
Sbjct: 349 QQQIKLATNQVESLMR--ETLIQNPRNVMAKGYGIVRNE-GKAIRSIQQIS-GDKVQVEL 404

Query: 490 FDGQANAIVINK 501
            DG   A V   
Sbjct: 405 QDGTIQANVTKV 416


>gi|293370350|ref|ZP_06616905.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CMC
           3f]
 gi|292634571|gb|EFF53105.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CMC
           3f]
          Length = 410

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 24  LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75
           ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   +IW      
Sbjct: 13  VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71

Query: 76  IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126
           ++   EE        GI+ LV   +        Y + +  + P+   G +     +   +
Sbjct: 72  LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 130

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183
           L EEG+ +   +  +P +P+ +AVI+S T A   D   ++            +FP  +QG
Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 190

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  A A   +PI
Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  RL      L++ +
Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305

Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +  RI     
Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365

Query: 363 IHNIQK 368
              + +
Sbjct: 366 DKLLSR 371



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    ++Q        +  E++   A+   +      ++      +
Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390

Query: 481 TKTRILINFFDGQANAIV 498
              R+      G+  ++V
Sbjct: 391 PGDRLTTRLLKGEVQSVV 408


>gi|325121550|gb|ADY81073.1| putative exodeoxyribonuclease VII large subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 421

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 82/408 (20%), Positives = 150/408 (36%), Gaps = 24/408 (5%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+SE    ++ ++       V V+ EI         GH Y  L  KD       
Sbjct: 1   MSEPQFSLSEYLGTVQEVIRVAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAETDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGGS+ DL + ND
Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFNFPPDLIVIIRGGGSVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   S+PI   IGHE D T+ D  A     TP+                 ++  
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSM 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  + LL  + +  Q  LS +   LD++   ++ + +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSLAQSQLSSAHRLLDQMKERIQFSSQQQVKFSLA 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
               ++  I          K    +  + + I  I +     I +E +
Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQISSPAIAIEMR 405



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E    ++ I       I   + +   +LH ++   ++++   H  + ++  RI+F 
Sbjct: 288 ERVQEAVDSMQTIKLLSQHQITTYQSKNDQLLHHIKSLAQSQLSSAHRLLDQMKERIQFS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K     +    + +     K    +GY  ++      I     +++   I I   
Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMR 405

Query: 491 DGQANAIVINKAPPKE 506
           DG   A +    P +E
Sbjct: 406 DGVVEANITQVIPNEE 421


>gi|294645488|ref|ZP_06723189.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CC
           2a]
 gi|294806752|ref|ZP_06765579.1| exodeoxyribonuclease VII, large subunit [Bacteroides xylanisolvens
           SD CC 1b]
 gi|292639189|gb|EFF57506.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CC
           2a]
 gi|294446034|gb|EFG14674.1| exodeoxyribonuclease VII, large subunit [Bacteroides xylanisolvens
           SD CC 1b]
          Length = 410

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 24  LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75
           ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   +IW      
Sbjct: 13  VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71

Query: 76  IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126
           ++   EE        GI+ LV   +        Y + +  + P+   G +     +   +
Sbjct: 72  LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMALRRREILLQ 130

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183
           L EEG+ +   +  +P +P+ +AVI+S T A   D   ++            +FP  +QG
Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 190

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  A A   +PI
Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  RL      L++ +
Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305

Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +  RI     
Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365

Query: 363 IHNIQK 368
              + +
Sbjct: 366 DKLLSR 371



 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    ++Q        +  E++   A+   +      ++      +
Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390

Query: 481 TKTRILINFFDGQANAIV 498
              R+      G+  ++V
Sbjct: 391 PGDRLTTRLLKGEVQSVV 408


>gi|256026617|ref|ZP_05440451.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
 gi|289764617|ref|ZP_06523995.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
 gi|289716172|gb|EFD80184.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
          Length = 259

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 8/230 (3%)

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQH 137
             +EG    + G +  +    ++Q+++  +      G+L   LEK K+KL E G F ++H
Sbjct: 3   DLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLSELGYFDEKH 62

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196
           K  +P  PK I V+T+ TGA ++DI++    RF  + + I+P KVQG    +EI   I  
Sbjct: 63  KRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAEQEIIKGIET 122

Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256
           LN ++E       D II  RGGGSIEDLW FN+E +  A  NS  PIISA+GHE D+ L+
Sbjct: 123 LNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAVGHEIDFLLS 176

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           D  AD RA TPT A E++VP KE L   L   E  +  ++   +      
Sbjct: 177 DLTADKRAATPTQAMELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRE 226


>gi|300770619|ref|ZP_07080498.1| exodeoxyribonuclease VII large subunit [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300763095|gb|EFK59912.1| exodeoxyribonuclease VII large subunit [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 424

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 160/394 (40%), Gaps = 25/394 (6%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64
           +   +S+ E++  ++  +         ++ E++       SGH Y  L   KD    + I
Sbjct: 7   NKTIFSLLEVTKSIQKTIADRYKSMYWIKAEMNKLNHYTHSGHCYPELVEKKDGKIVAEI 66

Query: 65  DAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGT 115
            +I+WK   N+I             EGI  L    I+ +       + I  + P+   G 
Sbjct: 67  RSILWKADYNRININFMKTVREPLREGITMLFQASIS-YDPMYGLSLKIVDIDPTFSLGE 125

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPL 172
           L     +  ++L EEG++      P P IPK IA+I+  T   + D  + I      +  
Sbjct: 126 LEKEKLESIQRLKEEGIYDLNKSLPFPVIPKRIAIISVETSKGLSDFYKIIHQNPWGYRF 185

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
              ++P  +QGD+    I   +  +   ++     + D+I + RGGG    L  +N+ ++
Sbjct: 186 ECTLYPALLQGDKSVPSIIQQLSIVAEHQD-----KYDVIAIIRGGGGEVGLSSYNNYLL 240

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            RAIA   +P+++ IGH T+ T+++  A   A TP+  A+  +    +    L      +
Sbjct: 241 ARAIAIFPLPVLTGIGHSTNLTVSEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETI 300

Query: 293 NNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
            N    + + +   LN     +   +   +  ++  +  L ++L+   +  +  K+    
Sbjct: 301 RNYSSLIFEQQAQKLNVFATDIRWTTQHMVEMAKNNIHILEKDLKAGFQQQVKEKFSFLE 360

Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
           +    ++    +H +Q+         Q +    +
Sbjct: 361 NTEKLLQLADPVHLLQRGFSITKINGQLLTSATQ 394



 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 57/152 (37%), Gaps = 5/152 (3%)

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM----LR 406
           + ++    +           Q        +++  +    Y  L  +++   L++    +R
Sbjct: 264 SEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETIRNYSSLIFEQQAQKLNVFATDIR 323

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
             T++ +     +I  L   ++     ++K   + +  T ++LQ     + L+RG++  +
Sbjct: 324 WTTQHMVEMAKNNIHILEKDLKAGFQQQVKEKFSFLENTEKLLQLADPVHLLQRGFSITK 383

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIV 498
             N   +T    +     I     DG+ ++ V
Sbjct: 384 I-NGQLLTSATQVKPGDNISTRVQDGEISSTV 414


>gi|295086502|emb|CBK68025.1| Exodeoxyribonuclease VII large subunit [Bacteroides xylanisolvens
           XB1A]
          Length = 410

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 24  LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75
           ++  +E  L     ++ E+S  R   ++GH Y  F  KD       ++   +IW      
Sbjct: 13  VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71

Query: 76  IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126
           ++   EE        GI+ LV   +        Y + +  + P+   G +     +   +
Sbjct: 72  LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 130

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQG 183
           L EEG+ +   +  +P +P+ +AVI+S   A   D   ++      F     +FP  +QG
Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSAIAAGYGDFCHQLQHNPSGFYFYTELFPALMQG 190

Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243
           ++  + +  A+ ++N           D++++ RGGG+  DL  F+  ++  A A   +PI
Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           I+ IGHE D T+ D  A  R  TPT AAE+ +     +   L  L  RL      L++ +
Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305

Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
              L +L   +PN   + L+ +R+ L    ++L    + ++ R+      +  RI     
Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365

Query: 363 IHNIQK 368
              + +
Sbjct: 366 DKLLSR 371



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            LIH + +  +H+ E    ++Q        +  E++   A+   +      ++      +
Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480
                 +  +    +      + +  + +   +    L RGY+     +   +T   +L 
Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390

Query: 481 TKTRILINFFDGQANAIV 498
              R+      G+  ++V
Sbjct: 391 PGDRLTTRLLKGEVQSVV 408


>gi|88802480|ref|ZP_01118007.1| exodeoxyribonuclease VII, large subunit [Polaribacter irgensii
           23-P]
 gi|88781338|gb|EAR12516.1| exodeoxyribonuclease VII, large subunit [Polaribacter irgensii
           23-P]
          Length = 457

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 107/512 (20%), Positives = 195/512 (38%), Gaps = 82/512 (16%)

Query: 10  LDHP-EYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDN-----H 61
            + P  YS+S++   +K I++ N+   +  ++ EI      H SGH Y  L +N      
Sbjct: 2   SNLPSYYSLSKILNRVKTIIDDNIDGKYFWLKVEIININF-HRSGHTYIELAENINGKTV 60

Query: 62  SRIDAIIWKGTLNKIEFLP--------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112
           ++  AIIW   +++I  +         ++G E L    I          ++I ++     
Sbjct: 61  AKCKAIIWSQNISQIREVLGQDFSNILKKGNEILCYTNIQFDTAHG-LSLLITAINLEFA 119

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCR 169
            G +    ++   +L +EG+     +  +P +   IAVI S   +   D ++ I      
Sbjct: 120 VGQIEKKRQETLDRLKKEGVIDLNKQIKVPLVISSIAVIASENTSGYEDFIKNIQNNHYN 179

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
           +   + IF   VQG+    EI   +  +N         + D I++ RGGGS  DL  FN 
Sbjct: 180 YKYNLEIFSSAVQGNGAELEILRKLKTINKQ-------KYDCIVIIRGGGSKMDLDVFNS 232

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             I + I+     + S IGHETD T+ D+AA+    TPT  +                  
Sbjct: 233 YEISKQISKMQSAVFSGIGHETDITVIDFAANQAFKTPTEVSNYI--------------- 277

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                 + +   ++   L++           L      L      + H   +    K   
Sbjct: 278 ------VNKSYDFEQKILSTYALIYEKQQNLLERKFGELVLHTEGITHASNVFTRLKRGT 331

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            + ++NR+ +       ++N   +L  Q+ +                          +Q+
Sbjct: 332 LHTLMNRLTARISNLINEENNTLLLSNQEQL--------------------------QQS 365

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
           K  I      +KK +  +  ++ H I +  T++S +   + S + K  LK+G+   +  N
Sbjct: 366 KRIIDNKERIVKKQLEMLGLLVDHVINTKKTALSNSLIQIASSSPKTILKKGFAIPR-VN 424

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501
            N       L   + I + F D    AI+I K
Sbjct: 425 GNLYK-GEPLEKDSIIKLEFQD----AIIITK 451


>gi|213586534|ref|ZP_03368360.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 110

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 1/109 (0%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G G L
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLL 110


>gi|262279649|ref|ZP_06057434.1| exodeoxyribonuclease VII [Acinetobacter calcoaceticus RUH2202]
 gi|262260000|gb|EEY78733.1| exodeoxyribonuclease VII [Acinetobacter calcoaceticus RUH2202]
          Length = 421

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 145/397 (36%), Gaps = 24/397 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+SE    ++ ++       V V+ EI         GH Y  L  KD       
Sbjct: 1   MSEPQFSLSEYLGTVQEVIRLAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL         PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLSTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGGS+ DL + ND
Sbjct: 178 SVCHFVYQTATFQGNTAATSLIESLGTGLRQWASTFTYPPDLIVIIRGGGSVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   S+PI   IGHE D T+ D  A     TP+                 ++  
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIIERVQEAVDSL 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  + LL  +  ++   L+   + LD++   ++ + +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLNSGHHLLDQMKERIQFSSQQQVKFSLA 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               ++  I          K    +  + + I  I +
Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394



 Score = 77.5 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E    ++ I       I   + +   +LH ++   ++++   H  + ++  RI+F 
Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLNSGHHLLDQMKERIQFS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K     +    + +     K    +GY  ++      I     +++   I I   
Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMQ 405

Query: 491 DGQANAIVINKAPPKE 506
           DG   A +    P +E
Sbjct: 406 DGVIEANITQVIPNEE 421


>gi|227539113|ref|ZP_03969162.1| exodeoxyribonuclease VII large subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241063|gb|EEI91078.1| exodeoxyribonuclease VII large subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 424

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 156/377 (41%), Gaps = 25/377 (6%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64
           +   +S+ E++  ++  +         ++ E++       SGH Y  L   KD    + I
Sbjct: 7   NKTIFSLLEVTKSIQKTIADRYKSMYWIKAEMNKLNHYTHSGHCYPELVEKKDGKIVAEI 66

Query: 65  DAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGT 115
            +I+WK   N+I             EGI  L    I+ +       + I  + P+   G 
Sbjct: 67  RSILWKADYNRINTNFMKTVREPLREGITMLFQASIS-YDPMYGLSLKIVDIDPTFSLGE 125

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPL 172
           L     +  ++L EEG++      P P IPK IA+I+  T   + D  + I      +  
Sbjct: 126 LEKEKLESIQRLKEEGIYDLNKSLPFPVIPKRIAIISVETSKGLSDFYKIIHQNPWGYRF 185

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
              ++P  +QGD+    I   +  +   ++     + D+I + RGGG    L  +N+ ++
Sbjct: 186 ECTLYPALLQGDKSVPSIIQQLSIVAEHQD-----KYDVIAIIRGGGGEVGLSSYNNYLL 240

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            RAIA   +P+++ IGH T+ T+++  A   A TP+  A+  +    +    L      +
Sbjct: 241 ARAIAIFPLPVLTGIGHSTNLTVSEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETI 300

Query: 293 NNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
            N    + + +   LN     +   +   +  ++  +  L ++L+   +  +  ++    
Sbjct: 301 RNYSGLIFEQQAQKLNVFATDIRWTTQHMVEMAKNNIHILEKDLKAGFQQQVKEQFSFLE 360

Query: 352 HIINRIKSDFLIHNIQK 368
           +    ++     H +Q+
Sbjct: 361 NTEKLLQLADPEHLLQR 377



 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 58/152 (38%), Gaps = 5/152 (3%)

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM----LR 406
           + ++    +           Q        +++  +    Y  L  +++   L++    +R
Sbjct: 264 SEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETIRNYSGLIFEQQAQKLNVFATDIR 323

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
             T++ +     +I  L   ++     ++K   + +  T ++LQ    ++ L+RG++  +
Sbjct: 324 WTTQHMVEMAKNNIHILEKDLKAGFQQQVKEQFSFLENTEKLLQLADPEHLLQRGFSITK 383

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIV 498
             N   +T    +     I     DG+ ++ V
Sbjct: 384 I-NGQLLTSTTQVKPGDNISTRVQDGEISSTV 414


>gi|193076920|gb|ABO11652.2| possible exonuclease [Acinetobacter baumannii ATCC 17978]
          Length = 420

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ NL
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + T + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQI-TNSTITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 406 DGAINANITEVIPNE 420


>gi|184157523|ref|YP_001845862.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           ACICU]
 gi|332875427|ref|ZP_08443253.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6014059]
 gi|183209117|gb|ACC56515.1| Exonuclease VII, large subunit [Acinetobacter baumannii ACICU]
 gi|322507838|gb|ADX03292.1| putative exodeoxyribonuclease VII large subunit [Acinetobacter
           baumannii 1656-2]
 gi|323517438|gb|ADX91819.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332736363|gb|EGJ67364.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6014059]
          Length = 420

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ NL
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 73.3 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + + + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 406 DGAINANITEVIPNE 420


>gi|110667980|ref|YP_657791.1| exodeoxyribonuclease VII large subunit [Haloquadratum walsbyi DSM
           16790]
 gi|109625727|emb|CAJ52160.1| exodeoxyribonuclease VII large subunit [Haloquadratum walsbyi DSM
           16790]
          Length = 392

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 95/357 (26%), Positives = 158/357 (44%), Gaps = 19/357 (5%)

Query: 17  VSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74
           V++++  +  +VE    + H  + G+IS Y  I S+GH +F L    S +  +I++  ++
Sbjct: 31  VNDINTQIGDLVEGSPAIEHEYILGDISDY-SISSNGHGHFDLVHEDSSLHCVIFRSRVD 89

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           K++   E+GI   V G I+ +       I++  +I  G G      ++ K+ L E G   
Sbjct: 90  KLQNDIEQGILAAVSGDISYYESEGSVSILVRDIIAVGQGIYQQTYQENKQTLAESGYLD 149

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193
           +  K  +P++PK I + TS      +D +  I  ++P + + +    VQG++    + +A
Sbjct: 150 ESAKQSLPYLPKHIGIATSGDSDARQDAVTSIHDQYPDINITVQDTSVQGNDALVSLMDA 209

Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253
           I  L          R  +IIL RGGG+ + L  FN+  + R I  ++ PI+  +GHETD 
Sbjct: 210 ISSL------DDNARIKLIILTRGGGAEKHLRVFNEIPLCRVIHETTTPIVVGVGHETDR 263

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TLA   AD R  TPT   +   P K+ LQ  L  L A LN+     +K  I   +  L +
Sbjct: 264 TLAGAVADTRVMTPTEVGKTV-PEKDRLQEELERLSADLNHAYTNTVKQAIEQKHDRLNS 322

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
                   +  R   D L              K +  +              IQ+ R
Sbjct: 323 --------AYDRQVTDELRSVSNRLNTAYETVKQQKAHERERAKMIKPYERTIQRQR 371


>gi|239503693|ref|ZP_04663003.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AB900]
          Length = 420

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ NL
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 51/135 (37%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + + + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG   A +    P +
Sbjct: 406 DGAIKANITEVIPNE 420


>gi|299770882|ref|YP_003732908.1| exodeoxyribonuclease VII large subunit [Acinetobacter sp. DR1]
 gi|298700970|gb|ADI91535.1| exodeoxyribonuclease VII large subunit [Acinetobacter sp. DR1]
          Length = 421

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 80/424 (18%), Positives = 157/424 (37%), Gaps = 24/424 (5%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+SE    ++ ++       V V+ EI         GH Y  L  KD       
Sbjct: 1   MSEPQFSLSEYLGTVQEVIRLAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAKTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ANCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGGS+ DL + ND
Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFKFPPDLIVIIRGGGSVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   ++PI   IGHE D T+ D  A     TP+                 ++  
Sbjct: 238 YELAALLCKRTVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  + LL  + +S Q  L+ +   LD++   ++ + +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHQIKSSAQGQLNSAHRLLDQMKERIQFSSQQQVKFSLT 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               ++  +          K    +  + + I  I +     I +E ++ +   ++ +  
Sbjct: 358 QIESLMKEVLLQNPKQVQAKGYAIVRSEGKAIRSIHQISNPAIAIEMQDGVIEANITQVI 417

Query: 409 TKNR 412
              +
Sbjct: 418 PNEQ 421



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E    ++ I       I   + +   +LH ++   + ++   H  + ++  RI+F 
Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHQIKSSAQGQLNSAHRLLDQMKERIQFS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   T +    + +     K    +GY  ++      I     ++    I I   
Sbjct: 348 SQQQVKFSLTQIESLMKEVLLQNPKQVQAKGYAIVRSE-GKAIRSIHQIS-NPAIAIEMQ 405

Query: 491 DGQANAIVINKAPPKE 506
           DG   A +    P ++
Sbjct: 406 DGVIEANITQVIPNEQ 421


>gi|293608633|ref|ZP_06690936.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829206|gb|EFF87568.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 421

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 148/397 (37%), Gaps = 24/397 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+SE    ++ ++       V V+ EI         GH Y  L  KD       
Sbjct: 1   MSEPQFSLSEYLGTVQEVIRVAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAETDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGGS+ DL + ND
Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFNFPPDLIVIIRGGGSVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   S+PI   IGHE D T+ D  A     TP+                 ++  
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  + LL  + +S Q+   S +R LD++   ++ + +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLSSAHRLLDQMKERIQFSSQQQVKFSLA 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               ++  I          K    +  + + I  I +
Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394



 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E    ++ I       I   + +   +LH ++   ++++   H  + ++  RI+F 
Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLSSAHRLLDQMKERIQFS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K     +    + +     K    +GY  ++      I     +++   I I   
Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMQ 405

Query: 491 DGQANAIVINKAPPKE 506
           DG   A +    P +E
Sbjct: 406 DGVVEANITQVIPHEE 421


>gi|223557985|gb|ACM90991.1| exodeoxyribonuclease VII large subunit [uncultured bacterium URE4]
          Length = 395

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/355 (23%), Positives = 153/355 (43%), Gaps = 28/355 (7%)

Query: 15  YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-----SRIDAII 68
             + EL   LK  VE        V+ EI  +    ++GH Y +L  +      + I A+I
Sbjct: 6   LELKELLARLKEGVEDAFPDRYWVKAEIGSWSPR-ANGHCYLNLTQSDRGKPVADIRAMI 64

Query: 69  WKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119
           WK    +++           + GI  LV  +++         + I+ + P+   G    A
Sbjct: 65  WKWVFPQLKAFFEQETGQTLQAGITVLVRVQVSFSEMFG-ISLFIDDIDPAFTVGEQALA 123

Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVII 176
            +K  +KL   G    Q +  +P +P  +AVITS T A   D  + +      +  R+ +
Sbjct: 124 KKKAIEKLTAGGYLEMQQELALPRLPYRLAVITSKTAAGYGDFRRHLLENEAGYAFRLDL 183

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
           +   +QG++ P  I +A+ +             D +++ RGGGS  DL  F+D  +  AI
Sbjct: 184 YEALMQGEQAPASIISALAEAQEQP-------CDAVLILRGGGSEMDLACFDDYDLAVAI 236

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           A    P+++AIGH+ D+ +AD  A+    TPT  A++ +       + L +L+ R+   +
Sbjct: 237 ATCPAPVVTAIGHDRDFHIADLVANRSVKTPTALADLFLDAYAAEDALLDDLQMRVRRAV 296

Query: 297 IRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
              +   +  ++SL++ L  +    +  +R  LD     ++ +    I       
Sbjct: 297 ADRVNGMVRKVDSLVQRLRFAAGARIDRARAALDLKEALIQASDPRKILSMGYAL 351



 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%)

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           +   +R    +R+  +   +  L+ R+ F    +I     ++ +   ++Q+   +  L  
Sbjct: 288 LQMRVRRAVADRVNGMVRKVDSLVQRLRFAAGARIDRARAALDLKEALIQASDPRKILSM 347

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508
           GY  +   +   +     +A   RI + F DG   A V          
Sbjct: 348 GYALVTGGDGKVLKSVVPVAAGDRIGVRFADGSIRATVDAVDFSASSK 395


>gi|307298695|ref|ZP_07578498.1| Exonuclease VII, large subunit-like protein [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306915860|gb|EFN46244.1| Exonuclease VII, large subunit-like protein [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 513

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 85/438 (19%), Positives = 167/438 (38%), Gaps = 34/438 (7%)

Query: 83  GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142
           G ++L  G ++ +   + + I I+++ P G   +     +    L        +  +   
Sbjct: 93  GKKWLFEGTLSFYKPRASFSIWIDTIAPIGESDIAARRREIYLALKARNALRTEEHDLAE 152

Query: 143 FIP-KIIAVITSPTGAVIRDILQRISCRFPLR--VIIFPVKVQGDECPKEIANAILQLNT 199
             P K IAVI+S T A + D    +S ++P +  V +F   +QG+     I +A+ ++  
Sbjct: 153 LPPIKRIAVISSSTAAGLGDFFSNLSLQYPYKPIVHLFESYMQGNRTVPGILSALRKI-- 210

Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS---IPIISAIGHETDWTLA 256
                   + D+++L RGGGS  DL +F++  +  AI++ +    P++SAIGHE D+T+ 
Sbjct: 211 ---ASCPVKYDVVVLTRGGGSASDLMYFDNLDLGSAISDFNKTYCPVLSAIGHERDFTIP 267

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D+ A  R  TPT  A           +SL      L++ +  L +   +  +        
Sbjct: 268 DFVAWKRFDTPTAVARGITEQVNEYVASLEEFANHLDDEMNWLFQRACDETDP-----KR 322

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---NIQKNRQHI 373
               L      ++R     E  + ++           +N + S        +I++    I
Sbjct: 323 LGIMLDRIEDNMNRTEHFFEDEIRVLSGTILHRIGQAVNELGSFNPTRYVLSIERTMNEI 382

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           L   + +    +  ++  F   + ++     LR Q    +   +  ++ L   I  +   
Sbjct: 383 LAVTEGLINRAETTIQRSFHYSESQLDYAG-LRNQLDRHLMNANGQVELLDKGILRLFDD 441

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYT-------SIQDTNNNFITQKRNLATKTRIL 486
           KI      +      L       TL  GY         +    +  +   R ++    + 
Sbjct: 442 KINEAGNDLDDLFNDL-------TLHGGYAASLLFGGVVLKKADRIVNSVRIISPGDEVD 494

Query: 487 INFFDGQANAIVINKAPP 504
             F DG+A A +      
Sbjct: 495 CIFKDGEAKATIDEVKSE 512


>gi|169633858|ref|YP_001707594.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           SDF]
 gi|169152650|emb|CAP01647.1| putative exodeoxyribonuclease VII large subunit (Exonuclease VII
           large subunit) [Acinetobacter baumannii]
          Length = 420

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 RVCHFVYQSATFQGNTAAASLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ NL
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + + + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 406 DGAINANITEVIPNE 420


>gi|169796568|ref|YP_001714361.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AYE]
 gi|213156319|ref|YP_002318739.1| exodeoxyribonuclease VII [Acinetobacter baumannii AB0057]
 gi|215484028|ref|YP_002326253.1| Exodeoxyribonuclease 7 large subunit [Acinetobacter baumannii
           AB307-0294]
 gi|301348136|ref|ZP_07228877.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AB056]
 gi|301513381|ref|ZP_07238618.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AB058]
 gi|301595142|ref|ZP_07240150.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AB059]
 gi|332854623|ref|ZP_08435445.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013150]
 gi|332867715|ref|ZP_08437804.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013113]
 gi|169149495|emb|CAM87383.1| putative exodeoxyribonuclease VII large subunit (Exonuclease VII
           large subunit) [Acinetobacter baumannii AYE]
 gi|213055479|gb|ACJ40381.1| exodeoxyribonuclease VII [Acinetobacter baumannii AB0057]
 gi|213987645|gb|ACJ57944.1| Exodeoxyribonuclease 7 large subunit [Acinetobacter baumannii
           AB307-0294]
 gi|332727907|gb|EGJ59306.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013150]
 gi|332733799|gb|EGJ64950.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013113]
          Length = 420

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 KVCHFVYQNATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ +L
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E    ++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + + + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 406 DGAINANITEVIPNE 420


>gi|260550020|ref|ZP_05824235.1| exodeoxyribonuclease VII [Acinetobacter sp. RUH2624]
 gi|260407012|gb|EEX00490.1| exodeoxyribonuclease VII [Acinetobacter sp. RUH2624]
          Length = 421

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 146/397 (36%), Gaps = 24/397 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P++S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQFSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNIK--GGHYYLELAEKDVDTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + +K  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF    + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIANVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++         R    PD+I++ RGGG++ DL + ND
Sbjct: 178 KVCHFVYQSATFQGNTAAVSLMESLATGLKQWANRYNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +   +   S+PI   IGHE D T+ D  A     TP+                 ++  
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVEHVQEAVDSL 297

Query: 290 ARLNNIIIRLIKYKINTLNSLLKAL-PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             +  +    I    +  + LL  +  ++   L+ +   LD++   ++ + +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHINSSAQNQLNSAHRLLDQMKERIQFSSQQQVKFSLA 357

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               ++  I          K    +  + + I  I +
Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394



 Score = 78.3 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 2/136 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +H+ E    ++ I       I   + +   +LH +    +N++   H  + ++  RI+F 
Sbjct: 288 EHVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHINSSAQNQLNSAHRLLDQMKERIQFS 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K     +    + +     K    +GY  ++      I     +++   I I   
Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PSIAIEMQ 405

Query: 491 DGQANAIVINKAPPKE 506
           DG   A +    P +E
Sbjct: 406 DGVVEANITQVIPNEE 421


>gi|260558032|ref|ZP_05830244.1| exodeoxyribonuclease VII, large subunit [Acinetobacter baumannii
           ATCC 19606]
 gi|260408542|gb|EEX01848.1| exodeoxyribonuclease VII, large subunit [Acinetobacter baumannii
           ATCC 19606]
          Length = 420

 Score =  159 bits (403), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61
           +  P+ S+SE    ++ ++       V VR EI         GH Y  L  KD       
Sbjct: 1   MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58

Query: 62  SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112
           +   A IWK + NK  ++F  E GIE       L+  +   F     + + IE +  S  
Sbjct: 59  ASCKATIWKFSANKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L +EGL       P PF  + + VI     A + D       +   
Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                +      QG+     +  ++              PD+I++ RGGG++ DL + ND
Sbjct: 178 RVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288
             +   +   S+PI   IGHE D T+ D  A     TP+           E +Q ++ NL
Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+  +   L     ++   L+ +   L+++   ++   +  +     
Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357

Query: 349 HFNHIINRIKSDFLIH 364
               ++  I       
Sbjct: 358 QTESLMREILLQNPKQ 373



 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + + + I ++  
Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 406 DGAINANITEVIPNE 420


>gi|226323207|ref|ZP_03798725.1| hypothetical protein COPCOM_00979 [Coprococcus comes ATCC 27758]
 gi|225208397|gb|EEG90751.1| hypothetical protein COPCOM_00979 [Coprococcus comes ATCC 27758]
          Length = 179

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 3/156 (1%)

Query: 12  HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              Y+V +++ ++K++   +   + + ++GE+S  +  H+SGH YFSLKD    I  +++
Sbjct: 2   RNVYTVKQVNAYIKNMFTQDFMLNRIYIKGEVSNCK-YHTSGHLYFSLKDESGTIACVMF 60

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G  + + F  +EG + +V+G ++ +    +YQ+  + ++  G+G L     K KK+L E
Sbjct: 61  AGQRSGLSFRMQEGQQVIVLGSVSVYERDGRYQVYAKEIVLDGAGLLYEKFIKLKKELEE 120

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
            G+F+ ++K     I            +      Q 
Sbjct: 121 MGMFAPEYKKADSEICADSWCCNGTNRSGSARYYQH 156


>gi|262375268|ref|ZP_06068501.1| exodeoxyribonuclease VII, large subunit [Acinetobacter lwoffii
           SH145]
 gi|262309522|gb|EEY90652.1| exodeoxyribonuclease VII, large subunit [Acinetobacter lwoffii
           SH145]
          Length = 423

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 141/399 (35%), Gaps = 24/399 (6%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------ 62
            D P+ S+ E    ++ +V+      V V+ EI         GH Y  L +  +      
Sbjct: 2   TDDPQLSLKEYLATVQEVVKLTFDTPVWVKAEIRNLSIKA--GHYYLELAEKEADSDQVI 59

Query: 63  -RIDAIIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIP-SG 112
               A IWK +  KI  +F  E G      ++ L+  K   F     + + I  +     
Sbjct: 60  ASCRATIWKFSAQKIVTQFERESGIELSRDLKVLIKVKAN-FDPQYGFSLNIVEIDSGYT 118

Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169
            G +    ++  ++L  EGL       P PF    I VI     A + D       +   
Sbjct: 119 LGDIARRYQQIVERLTTEGLIQRNRNLPSPFDLNRILVIAPENAAGLGDFKKDADALQRA 178

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
                I +    QG+  P+ I   + Q            PD+I++ RGGG++ DL + ND
Sbjct: 179 QVCEFIYYSATFQGNTAPQSIMQNLAQALKQWAQTYNTAPDLIVIIRGGGAVNDLAYLND 238

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINL 288
             +   +   S+P+   IGHE D T+ D  A     TP+           E  Q  L  L
Sbjct: 239 YDLAALLCKRSVPVWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIFELTQDVLNYL 298

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           +        ++  Y+      L      ++  +  +  RL ++        +       +
Sbjct: 299 QRIQRLSQQQIQAYQNQNDQFLKLIQSLANNQIMDALQRLQQIKANTASLAQQHTLLINQ 358

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
             + ++         H + K    + +++  +  I +  
Sbjct: 359 QLDALMRETLLQNPKHVLSKGYAIVRQQEHMVASIQQIQ 397



 Score = 67.1 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 5/153 (3%)

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
                D     I   R HI E  Q    ++++I +   + I   + +    L +++    
Sbjct: 269 AHRSFDTPSKVIAGIRNHIFELTQDVLNYLQRIQRLSQQQIQAYQNQNDQFLKLIQSLAN 328

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
           N+I      ++++      +        +  +    R       K+ L +GY  ++    
Sbjct: 329 NQIMDALQRLQQIKANTASLAQQHTLLINQQLDALMRETLLQNPKHVLSKGYAIVR-QQE 387

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           + +   + + +   + +   DG  +A +I   P
Sbjct: 388 HMVASIQQIQSSDLVEVELHDGIFSAQLIQVLP 420


>gi|310831037|ref|YP_003969680.1| putative exodeoxyribonuclease VII large subunit [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386221|gb|ADO67081.1| putative exodeoxyribonuclease VII large subunit [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 449

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 106/427 (24%), Positives = 188/427 (44%), Gaps = 23/427 (5%)

Query: 17  VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
           +S+L+  +   + +      V  E+ G       GH YF  K+N++++  +I++ T    
Sbjct: 5   ISQLNKEIIKYLPT--KKYIVESEVIGVSNRR--GHTYFDFKENNNKLGGLIFRNT---- 56

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKRKKKLLEEGLFSD 135
             + E+G +    GK++ +    K    ++ +   SG G +       K+KL +EGLF+ 
Sbjct: 57  -EILEDGDKIKCAGKLSYYAPYGKLSFQVDKIISKSGLGAIYKDFLIVKEKLTKEGLFNK 115

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194
            HK  +  + +   +ITS  GA I+DI + +S     ++V I  V VQG  CP E++N +
Sbjct: 116 IHKKKLNGLIEKAIIITSKDGAAIQDIYRNLSNHNSKIKVKIKDVPVQGVNCPIEVSNLL 175

Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254
            +LN            +II+ RGGG  +DL  FN E+IVR+I N++  IISAIGHETD  
Sbjct: 176 NKLNKHHNM-------LIIITRGGGDYQDLNGFNQEIIVRSIFNNNNIIISAIGHETDTV 228

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D  +D   PTP+  A+  +     L +   N+   L   I   I+ K + L    K +
Sbjct: 229 LTDLVSDYNLPTPSLVAQFLIDYNNELLNEWNNMILNLEKNINLEIQNKYDMLRDFEKNI 288

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
              +  L     +++   ++   +   ++    +      N++        I K    I 
Sbjct: 289 LEEENKLDLLINKIENDIKKDIQSKYDMLRDFDKIILEEENKLDLW-----INKIENEIK 343

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           E  Q+   I++   + I  E+ +    +  +    K  I+     +      +  +   K
Sbjct: 344 EDIQNRYDILRDFDKTILQEENKLDLWISKIENDIKEEIYKCDKELDDYYNYLSSVGEIK 403

Query: 435 IKSCHTS 441
           I +    
Sbjct: 404 ILNRKEE 410


>gi|75763304|ref|ZP_00743050.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74489204|gb|EAO52674.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 260

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 49/299 (16%)

Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
               D++I+ RGGGSIE+LW FN+EM+ RAI  S IPIISA+GHETD+T+AD+ ADLRAP
Sbjct: 1   MGEIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISAVGHETDFTIADFVADLRAP 60

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSC 323
           TPT AAE+A P    LQ  ++    RL   +  L+  K   L  L K+       Q    
Sbjct: 61  TPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKDEKLQVLQKSYAFRYPRQVYEQ 120

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
              +LDR   +L    E  I +K      +   ++       I + +  +   Q+ +++ 
Sbjct: 121 KEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQKIMQTKVAVETLQKQLQRE 180

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
           +                                                  +++   +  
Sbjct: 181 M-----------------------------------------------QTLLQTKEFAFV 193

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              + L++ +    + RGY  + D     +   ++++    + +   DG  +  V    
Sbjct: 194 RAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDAVSVQLQDGILDCSVSGIE 252


>gi|213161728|ref|ZP_03347438.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 107

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 8   NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           +S     ++VS L+  ++ ++E  +  V + GEIS +    +SGH YF+LKD+ +++   
Sbjct: 3   SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +++ +  ++ F P+ G + LV   IT +     YQII ES+ P+G 
Sbjct: 62  MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGE 107


>gi|149276524|ref|ZP_01882668.1| exodeoxyribonuclease VII, large subunit [Pedobacter sp. BAL39]
 gi|149233044|gb|EDM38419.1| exodeoxyribonuclease VII, large subunit [Pedobacter sp. BAL39]
          Length = 431

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 85/500 (17%), Positives = 174/500 (34%), Gaps = 102/500 (20%)

Query: 34  HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAIIWKGTLNKIE-FLPEEGIE 85
              V  +IS Y     S + YF L  KD+      +RI    W      I  F    G +
Sbjct: 2   SFWVIADISNYTYKVQSNYHYFELIEKDSGSSRVVARIAGRAWGNASLHIRNFEKTTGQQ 61

Query: 86  ----FLVIGKITT-FPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEG-------- 131
                 V+ +++  +  S   Q+ +  +  S   G      ++  ++L+ E         
Sbjct: 62  FKNDINVLVQVSVQYNPSFGLQLNLLDIDTSFTLGKFEQQRKETLERLVRENGDFIQRNG 121

Query: 132 --LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQGDEC 186
              F+         + + IAV++S T A  +D    +      +   V  +   VQG+  
Sbjct: 122 EQYFTRNKGLRFNRVLQRIAVLSSDTSAGFQDFKHTLEHNPFGYHFDVDDYFTLVQGEGN 181

Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246
            ++  + ++ +       +  + D +++ RGGG+  D   F++  + RAIA   IPII+ 
Sbjct: 182 ARQFLSRLIAVFE-----SQKKYDALVIIRGGGAQSDFVMFDNYELNRAIAKFPIPIITG 236

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGH+ + T+AD  A     TPT AAE+                      I     ++   
Sbjct: 237 IGHQKNETIADLMAHTSTKTPTKAAELL---------------------IAHNRHFEEQL 275

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
           LN     L  + Q ++  + RL +L +   +  + ++   +R   +  N +        I
Sbjct: 276 LNMQQTVLIRTFQMINLQKDRLGQLNQLTINTSKNLLHEHHRLLMNRSNML--------I 327

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
              R  +  KQ+ +  +V                                          
Sbjct: 328 SNPRVLMANKQKDLGNLVIN---------------------------------------- 347

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486
           ++       ++   +++    +++  + KN L +G+  +   +    +    +   T + 
Sbjct: 348 MKTYSRMYFQNKQANIAHFESLVKMMSPKNILNKGFALLMR-DGKITSDASAIEPGTELT 406

Query: 487 INFFDGQANAIVINKAPPKE 506
           ++         V +K+    
Sbjct: 407 VHLASAILKTTVKSKSTNDG 426


>gi|261416719|ref|YP_003250402.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373175|gb|ACX75920.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302328054|gb|ADL27255.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 432

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 83/366 (22%), Positives = 140/366 (38%), Gaps = 28/366 (7%)

Query: 15  YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD-------NHSRI--- 64
           YSV++    LK+ VE+    V V G IS       SG  Y S+ D         + +   
Sbjct: 8   YSVTQYMRSLKNTVEAT-PAVWVHGVISQIAEK-KSG-VYLSIADFADGDVKPKATLALY 64

Query: 65  ------DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
                 DAI+ K +     F  +  ++   + +   +    K Q  I  + P    G L 
Sbjct: 65  CYTAKYDAILAKISSLSQPFTLKHDLKVNFLVRAELYIPYGKLQAQILDIDPVYTIGELA 124

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVII 176
                  K+L  EGL     +  +  +P  + +IT    A  +D   R+    F   V  
Sbjct: 125 LTKSAILKRLAMEGLLEKNKQLELADVPLRVGLITGENTAAYKDFTTRLEASPFAFEVTT 184

Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236
              ++QG+E    I  A+ QL      ++    D++ + RGGG+  DL  F+ E + RA+
Sbjct: 185 IYARMQGNETEDSIIAALEQL------QSDSNLDVVCIVRGGGAKTDLNFFDSEALCRAV 238

Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296
           AN   P+ + IGHE D  L D  A L   TPT  A+  V       + +    A + +  
Sbjct: 239 ANYPTPVFTGIGHEIDRCLLDEVAYLSCITPTDCAKRLVERVTDSWNRMTEAMASIADGA 298

Query: 297 IRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             L+      L ++   L       +   + +   +   ++ +    I  ++   N    
Sbjct: 299 RDLLTENNKQLGTMGNQLQQKVFGLIQNEKSKHVLIAASIKKDTAFYIKSEHERLNRNQE 358

Query: 356 RIKSDF 361
            +K   
Sbjct: 359 GLKQGS 364


>gi|307565316|ref|ZP_07627809.1| exonuclease VII, large subunit [Prevotella amnii CRIS 21A-A]
 gi|307345985|gb|EFN91329.1| exonuclease VII, large subunit [Prevotella amnii CRIS 21A-A]
          Length = 439

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 166/398 (41%), Gaps = 30/398 (7%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNHS---RI 64
           +    S+ +L+  +  ++   L +   +  E+S      S GH Y  F  K+  S     
Sbjct: 4   NKKALSLKDLNELVAEVIHLQLHNTYWLEAELSQVNE--SRGHCYMEFIQKEETSNNIVA 61

Query: 65  DAI--IWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113
            A    W      I+   E         G++ +V      F     +  IIE + P    
Sbjct: 62  RAAGRCWANKWLNIKAYFERITGQNIHAGMKIMVQVSAQ-FHVQYGFSWIIEDINPEYTL 120

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRF 170
           G ++    +   +L  EG+F  Q +  +      IAVI+S T A   D   ++      F
Sbjct: 121 GDIMRRRNEIIAQLRAEGVFDLQKELYLSTFASRIAVISSITAAGYGDFCNQLLNNDYGF 180

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
              + +F   +QG+    +I   +  +N  ++       D +++ RGGG+  DL  F+  
Sbjct: 181 SFHIELFQSAMQGERVEHDIIACLNDINDRQDE-----FDCVVIIRGGGATADLSSFDTL 235

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            +   IAN  +PII+ IGHE D ++ D  + L+  TPT AA   +       S ++  E 
Sbjct: 236 FLAENIANFPLPIITGIGHERDESVIDLVSFLKVKTPTAAAAFLIDRLNVTFSRILKAEE 295

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRH 349
            ++  +   +KY+   +N+L   +P     +   + + L+ L +++ + +   I+ +   
Sbjct: 296 SIHKNVYDRLKYEHTRINNLANRVPLLFSLVKTQQEKHLNMLLQKMINLMLTYIYGEQNK 355

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
            +   + + S+   H +  ++ +I   +Q ++ +  + 
Sbjct: 356 IDAYYSSLLSNV-QHFLLNSKYNIELIEQRLKSVDPKR 392



 Score = 80.6 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 5/135 (3%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLITRI 427
            +  +   I  +  +      L K ++   L+ML ++  N     I+     I    + +
Sbjct: 304 RLKYEHTRINNLANRVPLLFSLVKTQQEKHLNMLLQKMINLMLTYIYGEQNKIDAYYSSL 363

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              + H + +   ++ +  + L+S   K  L+RGY+     N   IT    +     +  
Sbjct: 364 LSNVQHFLLNSKYNIELIEQRLKSVDPKRLLQRGYSITL-CNGRLITNINQIKEDDVLTT 422

Query: 488 NFFDGQANAIVINKA 502
             F G+  +IV  K 
Sbjct: 423 TLFHGKVKSIVKKKT 437


>gi|257453840|ref|ZP_05619118.1| exodeoxyribonuclease 7 large subunit [Enhydrobacter aerosaccus
           SK60]
 gi|257448767|gb|EEV23732.1| exodeoxyribonuclease 7 large subunit [Enhydrobacter aerosaccus
           SK60]
          Length = 505

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 76/382 (19%), Positives = 141/382 (36%), Gaps = 24/382 (6%)

Query: 7   KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH---- 61
           + +L     S+S+    ++ ++    +H V V+ EI         GH YF L D      
Sbjct: 75  QQALSDTVLSLSDYLSAVQLVISETFAHTVWVKAEIRSLSAK--GGHYYFELADKDMDGK 132

Query: 62  --SRIDAIIWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
             +     +W+G   KI  +F        E G+  L+    T F     + + I  + P+
Sbjct: 133 VTASCRGTLWRGQAAKILAKFEKNTGMSLERGLNVLLKVSAT-FHAQYGFSLNIVDIDPT 191

Query: 112 -GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170
              G L    +    +L EEGL       P+PF  + + VI     A + D         
Sbjct: 192 YTLGDLAKQYQMILTRLHEEGLLDLNQSLPMPFDIEHVLVIAPEKAAGLGDFRADADRLA 251

Query: 171 PLRVIIFP---VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227
                IF       QG+  P++I  A+++       +     D+I++ RGGG++ DL + 
Sbjct: 252 STGACIFHYEHATFQGNHAPEDIRQALIKGMK-NLSKQHITADLIVIIRGGGAVGDLAYL 310

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLI 286
           ND  +   +A   IP+   IGHE D  + D  A     TP+              Q++  
Sbjct: 311 NDYELAALVAEQPIPVWVGIGHERDRVMLDEVAHQSFDTPSKVIAGIRNHLLTITQAAKQ 370

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
           +           +++ + ++   L K    + + LS ++  +D    ++       I   
Sbjct: 371 HFLTIEQIAKSSILQARRDSEQQLTKIQSAAQRQLSAAKLAMDNQFVQIRQLAYQQITTA 430

Query: 347 YRHFNHIINRIKSDFLIHNIQK 368
            +  + +            + +
Sbjct: 431 RQSTDRLREMTLLQHPSTVLTR 452



 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 13/197 (6%)

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE---- 375
            L+          + +   + I   R     + + ++   D     I   R H+L     
Sbjct: 309 YLNDYELAALVAEQPIPVWVGIGHERDRVMLDEVAHQ-SFDTPSKVIAGIRNHLLTITQA 367

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
            +QH   I +     I   +++    L  ++   + ++      +     +I  +   +I
Sbjct: 368 AKQHFLTIEQIAKSSILQARRDSEQQLTKIQSAAQRQLSAAKLAMDNQFVQIRQLAYQQI 427

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--------DTNNNFITQKRNLATKTRILI 487
            +   S      +         L RGY  I+          +N  +T    +   + I I
Sbjct: 428 TTARQSTDRLREMTLLQHPSTVLTRGYAIIRTSHPASKDSASNTVMTSIAQVEPNSTITI 487

Query: 488 NFFDGQANAIVINKAPP 504
              DG   A V  K P 
Sbjct: 488 ELQDGYLQATVNAKHPK 504


>gi|154250244|ref|YP_001411069.1| exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1]
 gi|154154180|gb|ABS61412.1| Exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1]
          Length = 495

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 106/509 (20%), Positives = 202/509 (39%), Gaps = 55/509 (10%)

Query: 16  SVSELSYHLK------HIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-----HSRI 64
           ++ E   +++       +++     V    ++   +    +G  Y ++         + +
Sbjct: 18  TLREFVEYIELRLRETDLLKLRFKFV---ADV--VKVKPYNGSLYITVSQETVDGKKTEL 72

Query: 65  DAIIWKG----TLNKIEFLPE---EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
             I+WK      LN +    E   E  ++   GK++ +P  +++    +S+ P G   +L
Sbjct: 73  TIILWKNLTKIVLNSLGLKSEYELEHKKWEFQGKLSFYPDRAQFSFWADSIAPQGESDIL 132

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKI-IAVITSPTGAVIRDILQRISCRFPLR--V 174
              +K K+ L +E L  +   N     P   IAVITS T     D L  I     LR  +
Sbjct: 133 QRRQKIKELLKKERLLMEVLHNLDELEPIKYIAVITSKTAQGYFDFLSNILVPDELRPVI 192

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            ++   +QG    +E+ +A+ ++ T        + D+I++ RGGG   DL +F+D  + R
Sbjct: 193 HLYESSMQGATTAEEVISALNRIETFCREF-MVKYDVIVIIRGGGGPSDLMYFDDYNLAR 251

Query: 235 AIANSS--IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
            IA  +  IP+++ IGHE D T+ D+ A  R PTPT  A+          + +   + ++
Sbjct: 252 RIAQMNNFIPVLTGIGHEKDETIPDFVAWRRFPTPTAVAKEIS-------NQIKGYQDKV 304

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              +  L +Y  N +  L   L +++       +R      E E      +  K      
Sbjct: 305 ERNVSDLSRYMENAIELLNAKLSDTNYKTVKEIFRGKIQSVEEELIDSAEVLYKRFSLKE 364

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
               I  DF+ +  +K +  I E  + +            L+ K     L +       +
Sbjct: 365 YEKMISMDFIKNLSEKMKYDISEFSKKL-----------MLDYKYLKDTLELKINNINQQ 413

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +    T +   + +    LS+ ++            L + ++      G   +       
Sbjct: 414 VERY-TKLSDTLEKEYSNLSNLVEEKKEEFVKIGGPLSALSF------GGAVVL-KGRKI 465

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINK 501
           I  K+ L+T   ++INF DG+A A +  K
Sbjct: 466 IQSKKELSTGENVIINFIDGKAQATISGK 494


>gi|229552484|ref|ZP_04441209.1| exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1]
 gi|229314221|gb|EEN80194.1| exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1]
          Length = 293

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 57/342 (16%)

Query: 165 RISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223
            ++ R+P+ ++I+FP  VQGD+    I   + ++      +T    D +I+ RGGGSIED
Sbjct: 1   TVARRYPILQLILFPAIVQGDQAADSIVKQLNRI------KTMSGFDAVIIGRGGGSIED 54

Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK---EH 280
           LW FN+E + RA+A  ++PI+S++GHETD T+AD+ AD RA TPT AAE+  PV      
Sbjct: 55  LWPFNEEKVARALAEMAMPIVSSVGHETDTTIADFVADRRAATPTAAAEIVTPVTLVDAL 114

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
            + S   +                   ++    L   D+       R+D+L + L+ ++ 
Sbjct: 115 NRISEDQVRLVNAMHNRLKNAATRLQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSIN 174

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +            ++    L+  +   ++  ++ ++ +++                  
Sbjct: 175 NQLRENEHRLAMATAQLDGRQLLVKVANLQRQQVDDRRRLDR------------------ 216

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                                         +   + + H +V+     L   +    L R
Sbjct: 217 -----------------------------AMIALVTAKHQAVANAALGLDHLSPLKILGR 247

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           G+  + D     +    +      I I+  DGQ  A V  K 
Sbjct: 248 GFAFVTDDAGKMLKTTADYQVDAAIHIHVADGQIGARVTTKE 289


>gi|213029515|ref|ZP_03343962.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 230

 Score =  151 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 9/232 (3%)

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179
           E+ K KL  EGLF  QHK P+P     + VITS TGA + DIL  +  R P L VII+P 
Sbjct: 4   EQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPT 63

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239
            VQGD+ P +I  AI   NT  E       D++I+ RGGGS+EDLW FNDE + RAI  S
Sbjct: 64  AVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 117

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+    ++ L   + + + RL   +   
Sbjct: 118 RIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYY 177

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRH 349
           +  +      +   L      L  +R +   +RL + +   LE  I +  + 
Sbjct: 178 LANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQR 229


>gi|332667033|ref|YP_004449821.1| Exodeoxyribonuclease VII [Haliscomenobacter hydrossis DSM 1100]
 gi|332335847|gb|AEE52948.1| Exodeoxyribonuclease VII [Haliscomenobacter hydrossis DSM 1100]
          Length = 409

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 30/362 (8%)

Query: 16  SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67
           S+ +L   L+ +V  N    + VR EI+      S GH Y  L +         ++  A 
Sbjct: 5   SLFDLQTFLRQVVALNFPEALWVRCEIAQLSK--SRGHVYLDLVEKAETENEPIAQASAA 62

Query: 68  IWKGTLNKIEFLP---------EEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117
           IW+ TL +++            + G+E L+  K+  +      ++++E + PS   G L 
Sbjct: 63  IWQSTLKRLQSKLGATNLNPLLQAGVEVLLRVKVE-YHERYGLKLVVEDIDPSYTLGKLE 121

Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174
               +  ++L+ +GL     + P+  + + IA+I+S T A  +D LQ +      +  + 
Sbjct: 122 QRRRQLYEQLVAQGLMGKNAQIPLRPVLQRIAIISSATAAGYQDFLQHLGENAYGYAFKT 181

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
             F   VQG +   E+   +  +      R   R D + L RGGG+  DL  F+   + +
Sbjct: 182 TFFAAAVQGAQVEVEVLKQLRAV-----QRQATRFDAVALIRGGGAKLDLAGFDSLALCQ 236

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           AIA+  +P+ + IGH+ D TL D  A     TPT  A+  +    H +S L  L   L  
Sbjct: 237 AIADFPLPVFTGIGHDVDETLVDLVAHSALKTPTAVADFLIQHNLHFESQLAELSQYLRY 296

Query: 295 IIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           +    I   +  L + ++AL     Q L   +  L R   EL   L      +++    +
Sbjct: 297 VTAESIHVALLQLAASVQALQTAPVQLLDRQKDYLQRFAAELPLALRYQQREQWQRLEQM 356

Query: 354 IN 355
             
Sbjct: 357 EQ 358



 Score = 77.9 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 51/140 (36%), Gaps = 4/140 (2%)

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +DFLI +       + E  Q++  +  + +    L   +  A +  L+      +     
Sbjct: 273 ADFLIQHNLHFESQLAELSQYLRYVTAESIHVALL---QLAASVQALQTAPVQLLDRQKD 329

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
           ++++    +   L ++ +     +    +I Q  + + TL+RG++         I   + 
Sbjct: 330 YLQRFAAELPLALRYQQREQWQRLEQMEQICQLLSIEGTLQRGFSLTLKA-GKPIASAQQ 388

Query: 479 LATKTRILINFFDGQANAIV 498
                 + I   DG   + V
Sbjct: 389 ARQGDVLDIQLKDGTLRSKV 408


>gi|238809723|dbj|BAH69513.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 356

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 21/352 (5%)

Query: 12  HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
               S+ +L+  +K  +++N      ++  IS     +   HAY ++ D     +A IW 
Sbjct: 13  SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69

Query: 71  GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123
             +  I        +      + +   I+ +  ++     IE +             EK 
Sbjct: 70  SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182
           KK  L +G F    K PIP   + IAVI + +G  +RD+   +  RFP+  + +F   VQ
Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
           G +   +I   I   N           D+II+ARGGGS  DL  FN E IV AI  S IP
Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIVESKIP 242

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           I++AIGH  D + +D  AD    TPTGAA++ VP KE + S L N  AR  N I +++  
Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKMLLD 302

Query: 303 KINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
             N L  L + +     +  +     ++++    ++++  +++ +       
Sbjct: 303 SQNKLKKLAQKIYEFKPELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKE 354


>gi|309808825|ref|ZP_07702710.1| putative exodeoxyribonuclease VII large subunit [Lactobacillus
           iners LactinV 01V1-a]
 gi|308167951|gb|EFO70084.1| putative exodeoxyribonuclease VII large subunit [Lactobacillus
           iners LactinV 01V1-a]
          Length = 131

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 3/130 (2%)

Query: 10  LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
                 +V++L+++L    +++  L  V ++GE+S +R   +S   YFSLKD  S+I+A+
Sbjct: 3   TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           ++K    K++F   EG++  V G I  +     YQ  + ++ P+G G L   L + ++KL
Sbjct: 62  MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121

Query: 128 LEEGLFSDQH 137
            +EGLF+D  
Sbjct: 122 DKEGLFADSQ 131


>gi|257487187|ref|ZP_05641228.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 242

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 105/277 (37%), Gaps = 47/277 (16%)

Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283
           +W FN+E + RAI     PI+SA+GHETD +++D+ AD+RAPTP+ AAE+  P       
Sbjct: 1   MWCFNEEAVARAIDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSD--- 57

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                                                      R+D L R L   ++  +
Sbjct: 58  ----------------------------------------LHRRVDSLHRGLVSRMQDRL 77

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            R+      I  R++       +++  Q + +    + +  +Q++    +      + L 
Sbjct: 78  MRERLRLEGISRRLR--HPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLA 135

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
              +     + +L   +  L  R+   +  +IK+    +    + L   +   TL RGY+
Sbjct: 136 A--QHPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQSQVQTLNVVSPLATLGRGYS 193

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
            + D   + I       T  R+     +G+    V +
Sbjct: 194 ILLDERGHAIRNAAQTRTGQRLTARLGEGELQVRVED 230


>gi|330813630|ref|YP_004357869.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486725|gb|AEA81130.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 118

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 4/118 (3%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           + PE+SVSE++   K I+E N   + V+GEIS  +     GH YFSLKD +  ++++ W 
Sbjct: 3   NIPEFSVSEITNLTKSILEDNFGLIRVKGEISKVKDF--KGHYYFSLKDENFVLNSVCWS 60

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGS--SKYQIIIESLIPSGSGTLLTALEKRKKK 126
             +  +   PEEG+E    GK+TT+     S YQ+ ++ +   G G LL   E+RKK 
Sbjct: 61  RNVPFLNMKPEEGMEVFAQGKLTTYAKGSISNYQLQVDQIDAQGEGALLKIFEQRKKN 118


>gi|301064524|ref|ZP_07204921.1| exonuclease VII, large subunit [delta proteobacterium NaphS2]
 gi|300441370|gb|EFK05738.1| exonuclease VII, large subunit [delta proteobacterium NaphS2]
          Length = 259

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 48/298 (16%)

Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
           D+I+L RGGGS+EDL  FN+E +  AI  S IP++SA+GHE D T++D A+D RAPTP+ 
Sbjct: 2   DVIVLTRGGGSLEDLQAFNEEALALAIRQSRIPVVSAVGHEIDVTISDLASDFRAPTPSA 61

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329
           AAE+ V  KE L++ LI+L +R+  ++    +Y   TLN+L   L +  + L+ +   LD
Sbjct: 62  AAELLVAEKEALKNRLIDLRSRMVAVMGHQQRYYRETLNNLKDRLKDPRRRLANAWLHLD 121

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
            L + L   +  ++ R     N   N + +    + +  +RQH+  ++  + +       
Sbjct: 122 ELQQRLSRLMYFVLHRSRMAVNEKSNALLTHSPKNRVASHRQHLAFQKSSLVRA------ 175

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                                                    + ++++     + +  + L
Sbjct: 176 -----------------------------------------MQNELRGLGMRLDLLKKGL 194

Query: 450 QSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
                   LKRGY+   D  +   + +   +    ++++   +G+    V        
Sbjct: 195 WDLNPTAILKRGYSITFDLPDERILKRASAIQPGDQVMVLLGEGRLICRVEKAETDPG 252


>gi|309808799|ref|ZP_07702684.1| Exonuclease VII, large subunit [Lactobacillus iners LactinV 01V1-a]
 gi|308167925|gb|EFO70058.1| Exonuclease VII, large subunit [Lactobacillus iners LactinV 01V1-a]
          Length = 299

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 88/338 (26%), Positives = 140/338 (41%), Gaps = 55/338 (16%)

Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195
           +K  IP  P  IAV+TS +GAVI DI+   + RFP + + +FP  VQG +    I  ++ 
Sbjct: 5   NKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDAAASIIASLQ 64

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255
           Q+       +  + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS++GHETD TL
Sbjct: 65  QIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISSVGHETDTTL 119

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--A 313
           +D  AD RA TPT AAE A P    +   +I L   L   I  +I       N       
Sbjct: 120 SDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKILFNRTKNSVF 179

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L    +        LD L ++LE      +      +  +   + S      I+ + Q +
Sbjct: 180 LREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQIIKHHYQEL 239

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           + K Q                                                +   + +
Sbjct: 240 IFKTQ-----------------------------------------------NLNKSMCY 252

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
            I +   +    ++ L   +    + RGY    + +  
Sbjct: 253 LINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGK 290


>gi|126641270|ref|YP_001084254.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           ATCC 17978]
          Length = 392

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 23/347 (6%)

Query: 38  RGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAIIWKGTLNK--IEFLPEEGIE--- 85
           R EI         GH Y  L  KD       +   A IWK + +K  ++F  E GIE   
Sbjct: 2   RAEIRNLNVK--GGHYYLELAEKDADTDKVIASCKATIWKFSASKIVLKFERETGIELAS 59

Query: 86  ---FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPI 141
               L+  +   F     + + IE +  S   G +    ++  ++L +EGL       P 
Sbjct: 60  DLNVLIKIRAR-FDPQYGFSVNIEEIDSSFTLGEIAKRYQQIVERLTQEGLIHKNKLLPT 118

Query: 142 PFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLN 198
           PF  + + VI     A + D       +        +      QG+     +  ++    
Sbjct: 119 PFDIQNVLVIAPQNAAGLGDFKKDADALERNGVCHFVYQSATFQGNTAAVSLMESLATGL 178

Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADY 258
                     PD+I++ RGGG++ DL + ND  +   +   S+PI   IGHE D T+ D 
Sbjct: 179 KQWANNFNFPPDLIVIIRGGGAVNDLAYLNDYELAALLCKRSVPIWVGIGHEKDRTILDE 238

Query: 259 AADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
            A     TP+           E +Q ++ NL+        ++  Y+  +   L     ++
Sbjct: 239 IAHRSFDTPSKVIAGIRNHIVERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSA 298

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
              L+ +   L+++   ++   +  +         ++  I       
Sbjct: 299 QAQLNSAHQFLEQIKERIQFVSQQQVKFSLSQTESLMREILLQNPKQ 345



 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + + E   +++ I       I   + +    L  ++   + ++   H  ++++  RI+F+
Sbjct: 260 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 319

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
              ++K   +      R +     K    +GY  ++      I     + T + I ++  
Sbjct: 320 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQI-TNSTITVDMQ 377

Query: 491 DGQANAIVINKAPPK 505
           DG  NA +    P +
Sbjct: 378 DGAINANITEVIPNE 392


>gi|217076340|ref|YP_002334056.1| exodeoxyribonuclease VII large subunit [Thermosipho africanus
           TCF52B]
 gi|217036193|gb|ACJ74715.1| exodeoxyribonuclease VII large subunit [Thermosipho africanus
           TCF52B]
          Length = 481

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 82/438 (18%), Positives = 165/438 (37%), Gaps = 72/438 (16%)

Query: 83  GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142
           G +++  G+++ F     +    +++ P G   +    ++  K+L    L   +  +   
Sbjct: 92  GKKWIFQGRLSFFRDRMSFTFYADTIAPMGESEIEKRRKEILKELEVRNLLMKEKHDLSE 151

Query: 143 FIP-KIIAVITSPTGAVIRDILQRISCRFPLR--VIIFPVKVQGDECPKEIANAILQLNT 199
             P K IA+ITS + A   D L+ ++  +  R  V ++   +QG +    I  A+ ++  
Sbjct: 152 LPPIKKIAIITSKSAAGYEDFLKNLTVHYLYRPIVHLYESPMQGAQTASGIILALNRIRK 211

Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV--RAIANSSIPIISAIGHETDWTLAD 257
                +    D++++ARGGG+  DL +F+D  +    A  N   PI+S IGHE D+T+ D
Sbjct: 212 -----SNIDYDVVVIARGGGARSDLMYFDDLSLGIEIAKFNEYCPILSGIGHERDFTIPD 266

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           Y A  R  TPT  A       E     L +    L  ++  + K    T+   L      
Sbjct: 267 YVAWKRFATPTEVARAISKQIEDNVKKLDDSYNDLRILLSNVFKIYERTVELGL------ 320

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                     +D + + +  +   I+      +  I N +               I +  
Sbjct: 321 ----------IDYMKKVIGSDFIKIVKDLDETYEKIENFVSY------------KINDSS 358

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           Q + +                   L  +    +N++      ++     +E  +S  + +
Sbjct: 359 QRLSE-----------------DFLRFMSNSLENKLKSKKDSVENFEKILERDISILLSN 401

Query: 438 CHTSVSITTRILQSFAYKNTLKR--------GYTSIQDTNNNFITQKRNLATKTRILINF 489
             T ++ T + L        LKR        G   +   + +F+   R +    ++ +  
Sbjct: 402 KETMLNETFQEL--------LKREEFAPLLFGGALVM-KSGHFVKSIRQMKIGDKLDLYL 452

Query: 490 FDGQANAIVINKAPPKEQ 507
            DG+    V+ +   K++
Sbjct: 453 KDGKVKTKVVTEKKIKKE 470


>gi|226323206|ref|ZP_03798724.1| hypothetical protein COPCOM_00978 [Coprococcus comes ATCC 27758]
 gi|225208396|gb|EEG90750.1| hypothetical protein COPCOM_00978 [Coprococcus comes ATCC 27758]
          Length = 239

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 69/297 (23%)

Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
           + D++I+ RGGGSIEDLW FN+E + RA+   S+P+ISA+GHETD T+ DY ADLRAPTP
Sbjct: 12  KVDVMIVGRGGGSIEDLWAFNEEKVARAVFECSVPVISAVGHETDTTIIDYVADLRAPTP 71

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           + AAE+A+     L                                     +T+   R R
Sbjct: 72  SAAAELAICNYRELL------------------------------------ETIRTERER 95

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           + R       ++   +     H      + +       ++  RQ + + ++ I + +   
Sbjct: 96  MHR-------SMRRKLEVASLHTARYAEKFRYLSPSGKLKSMRQQLADYEEQIPKAMH-- 146

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                                   R+       +K+   +  ++   ++     ++I   
Sbjct: 147 -----------------------QRLEQEQERTRKVQEMLPLLMERNLRESRQQLAIRIE 183

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
            ++  +    L +G++ +Q +    + +  ++     + I   DGQ  A V +    
Sbjct: 184 RMKGLSPLAKLNQGFSYVQGSEGT-VKKVADVKKGDWLRIYVTDGQIEAQVTDTKKE 239


>gi|110639689|ref|YP_679899.1| exodeoxyribonuclease VII large subunit [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282370|gb|ABG60556.1| exodeoxyribonuclease VII, large subunit [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 387

 Score =  136 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 35/338 (10%)

Query: 11  DHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNH-----SR 63
             P   +SE    ++  + +        +  EIS           Y  L +       + 
Sbjct: 7   SIPSIRLSEFISEIEDCLAATFYGDTFWITTEISDVNKKPDKRWCYLKLIEKEGKNVTAE 66

Query: 64  IDAIIWKGTLNKI-------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
           I A+ W      I       + L ++G+E     K+T F      ++ I  +  +   G 
Sbjct: 67  IGAVFWTPGYAYIEKFEKETKQLFKDGLEITCRVKVT-FHKRWGLKLEIVEIDYAYTLGK 125

Query: 116 LLTALEKRKKKLLEEG----------LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
           L    ++   +L++E            ++     P+P + + IA+IT+P     RD  Q 
Sbjct: 126 LEAERQETLDRLVKENPDYVRLVGEQYYTFNKSLPLPAVVQRIALITAPESDGQRDFRQE 185

Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222
           +      +   V  F  ++QGD+  + I   +L +   KE     + D++ + RGGGS  
Sbjct: 186 LGNNPYGYAFHVDEFVTQIQGDKAHEFIIGKLLLIEAQKE-----KYDVVAIVRGGGSQL 240

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           DL  F+   + + IA+  +PI++ IGH+ + ++AD  A  +  TPT  A + +      +
Sbjct: 241 DLKAFDAYDLAQRIASFPVPILTGIGHDRNTSIADLMA-RQEKTPTKVANVIIQRNFQFE 299

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            +++ L+ R+ + +  L     N L  + + +  S+  
Sbjct: 300 QTVLILKERMVHTVDGLFTNAKNNLKEIKRFVKASNPL 337



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF--------YL 416
            +        +  Q I       L  I  ++   IA L   +E+T  ++           
Sbjct: 239 QLDLKAFDAYDLAQRIASFPVPILTGIGHDRNTSIADLMARQEKTPTKVANVIIQRNFQF 298

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
              +  L  R+   +     +   ++    R +++      LK+G+  ++  +N  IT  
Sbjct: 299 EQTVLILKERMVHTVDGLFTNAKNNLKEIKRFVKASNPLTILKKGFAIVK-QDNVIITDP 357

Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKE 506
             +   T I I F      + V  K    +
Sbjct: 358 SAIDVGTEIQIQFDKETVQSTVTKKKKNGK 387


>gi|150021779|ref|YP_001307133.1| exodeoxyribonuclease VII [Thermosipho melanesiensis BI429]
 gi|149794300|gb|ABR31748.1| Exodeoxyribonuclease VII [Thermosipho melanesiensis BI429]
          Length = 478

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 91/510 (17%), Positives = 176/510 (34%), Gaps = 86/510 (16%)

Query: 19  ELSYHLKHIVES--------NLSHVCVRGEISGYRGIHSSGHAYFSLKDN--------HS 62
           EL+ ++  +++S              VR  I      HSSG  Y  +           + 
Sbjct: 9   ELNEYVTRVIDSTGLTSETFRFYADVVRANI------HSSG-LYIDVSQTYPVRNGTRNI 61

Query: 63  RIDAIIWKGTLNKI--EFLPEE-----GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115
            I   I K    ++             G +++  GK++ +     +    +++ P G   
Sbjct: 62  EITVYIPKYMYPRMLAAIGLRNAKGLVGKKWIFQGKLSFYKDRMSFTFFADTIAPVGESE 121

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIP-KIIAVITSPTGAVIRDILQRISCRFPLR- 173
           +    ++  ++L    L   +  +     P K IAVI+S T A   D L+ +   +  + 
Sbjct: 122 IEKRKKEILRELKLRNLLMLEKHDLSELPPIKKIAVISSKTAAGYEDFLKNLKVGYLYQP 181

Query: 174 -VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
            V ++   +QG      I  A+ ++       +    +++++ARGGG+  DL +F+D  +
Sbjct: 182 IVHLYESPMQGANTAAGIILALERIKR-----SNIDYNVVVIARGGGAKSDLMYFDDLAL 236

Query: 233 VRAIANSS--IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
              IAN +   P++S IGHE D+T+ DY A  R  TPT  A       +     + +   
Sbjct: 237 GVEIANFNNYCPVLSGIGHERDFTIPDYVAWKRFATPTEVARAISRQIDDNVRQIDDNWN 296

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
            L  +++ +              L N    L+     +D + + L+            ++
Sbjct: 297 DLKLLMMNI--------------LKNISTLLN--TQLVDYINKTLKVTFLGYEDLFENYY 340

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
            ++ N +   F   + + +   +    Q +E  +      +    K       +      
Sbjct: 341 ENLKNHLNYIFEFSSRKISEDFLSFISQRMEGNLNAKKGELIGYAKLIEKDFAL------ 394

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
                    I      +  I    +K                     L  G   +     
Sbjct: 395 --------KISNKEALLNQIFQELLKKEE---------------LAPLLFGGAIVMKGRK 431

Query: 471 NFITQKRNLATKTRILINFFDGQANAIVIN 500
             I+  R L    +I I   DG+ NA + N
Sbjct: 432 K-ISSVRKLRMGEKIEIYLKDGKINAKISN 460


>gi|284035434|ref|YP_003385364.1| exodeoxyribonuclease VII [Spirosoma linguale DSM 74]
 gi|283814727|gb|ADB36565.1| Exodeoxyribonuclease VII [Spirosoma linguale DSM 74]
          Length = 404

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 138/339 (40%), Gaps = 40/339 (11%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSL-----------KDNHSR 63
           +S+L++ L+ +++       V V  E S  +     G+ + +L           +D  ++
Sbjct: 6   LSDLAFTLEAVIDEAFGQKAVWVVAETSDIKNYPDRGYCFLTLVERDATSGTSGRDTLAK 65

Query: 64  IDAIIWKGTLNKI-EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115
           +DA +W+   + I +F  E G      I+ L++  ++ F      ++ I  + PS   G 
Sbjct: 66  LDACVWRKNYHTISDFERETGVAFARNIQLLLLVSVS-FSPVYGLRLEILKIDPSYTLGN 124

Query: 116 LLTALEKRKKKLLEE----------GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
           L    ++    L+++             +     P P + + +A+IT+P     RD    
Sbjct: 125 LERERQQVLDTLVQKHPDLVWLEAGQYITANQLLPRPSVMQRLALITAPNSDGWRDFRHE 184

Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222
           ++     +   V  +  +VQG    + I + + ++       +    D +++ RGGGS  
Sbjct: 185 LAQNPFGYDFVVDEYLTQVQGQGAERAICSQLERI-----RSSELAYDAVVIVRGGGSQL 239

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
           D   F+  ++   +A   IP+++ IGHE + ++ D        TPT AA   +      +
Sbjct: 240 DFGSFDTYLMGHTVAGFPIPVLAGIGHERNVSITDLLCHQSVKTPTKAAAFLIEHNRQFE 299

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
            S + L  RL  +     +     L+   + L    QT 
Sbjct: 300 ESCLILRERLRVVTREAFQTAREDLDRETERLRFVSQTY 338



 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           + +   LR  T+         + +   R+ F+     ++CHT+++     L+     N L
Sbjct: 303 LILRERLRVVTREAFQTAREDLDRETERLRFVSQTYFRACHTNLAEKVVTLRHLDPSNVL 362

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499
           +RGY  +   N   +TQ  ++     + +  +DG  N +V 
Sbjct: 363 RRGYALLLR-NGRILTQTADVQPNEILQVQMYDGSINIVVS 402


>gi|294614726|ref|ZP_06694628.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636]
 gi|291592464|gb|EFF24071.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636]
          Length = 248

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 50/296 (16%)

Query: 212 IILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAA 271
           +I+ RGGGSIEDLW FN+E + RAI  ++ P+IS++GHETD T+AD  AD+RA TPT AA
Sbjct: 1   MIIGRGGGSIEDLWPFNEERVARAIYQANTPVISSVGHETDTTIADLVADVRAATPTAAA 60

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLD 329
           E+AVPV       +   +ARL    +R I+ K        +       ++       +LD
Sbjct: 61  ELAVPVLSEELMRIQERQARLQQAFVRQIQRKQERFERARRSYVFRQPERLYEGQTIKLD 120

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
           +L + L    + I   K +    + ++++    ++ ++  RQ     ++ +E        
Sbjct: 121 QLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLYRVKAARQETAYLEKRLE-------- 172

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                                     +  ++K+   R    +               + L
Sbjct: 173 ------------------------EKIQQYMKQQQQRFAQAV---------------QSL 193

Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
              +    + RGY+     N+  +     +     + I++ DG     V      +
Sbjct: 194 DLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDLLTIHYQDGIVKGQVQEIDKGE 248


>gi|255532093|ref|YP_003092465.1| exodeoxyribonuclease VII [Pedobacter heparinus DSM 2366]
 gi|255345077|gb|ACU04403.1| Exodeoxyribonuclease VII [Pedobacter heparinus DSM 2366]
          Length = 464

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 84/403 (20%), Positives = 163/403 (40%), Gaps = 39/403 (9%)

Query: 17  VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSL--KDNHS-----RIDAI 67
           +SEL+  ++  ++    +    V  +IS +     + + YF L  KD  S     +I   
Sbjct: 15  LSELATQIRQAIDGVFGNRTFWVIADISSHTYKSQTNYHYFELVEKDKGSAKILSKIAGR 74

Query: 68  IWKGTLNKI-EFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119
            W      I  F    G +       LV   +  +  +   Q+ +  +  S   G     
Sbjct: 75  AWGNASVNISNFEQATGQKFQNDINVLVQVAVQ-YNPAFGLQLNLLDIDTSFTLGLFEQQ 133

Query: 120 LEKRKKKLLEEG----------LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
            ++   +LL E            F+      +  + + IAVI+S T A  +D    +   
Sbjct: 134 RKETLARLLRENPDFIQKAGEQYFTRNGSLALNRVLQRIAVISSATSAGYQDFKHTLENN 193

Query: 170 -FPLRVII--FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226
            F  R II  +   VQG+   ++    I+++       +    D +++ RGGG+  D   
Sbjct: 194 TFGYRFIIDDYFTPVQGEANARQFLAKIVEVFQ-----SGKPYDTLVIIRGGGAQTDFLI 248

Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
           F++  + RAIA   +P+I+ IGH+ + T+AD  A     TPT AAE+ +      + +L+
Sbjct: 249 FDNYELSRAIAKFPVPVITGIGHQKNETIADLMAHTATKTPTKAAELIIAHNRAFEENLL 308

Query: 287 NLEARLNNIIIRLIKYKINTLNS-LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            ++  +     +LI Y  + L       +  S   L   +  +  L R +  N  II+  
Sbjct: 309 GMQKMMLIKTYQLINYHKDRLAQLNQTTISTSRGLLHEQQLHIISLSRMVLGNPRIILSN 368

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           + +  +++I  ++S         N++  +   Q + +++    
Sbjct: 369 RQKDLSNLIGNMQSY--NRMYFANKRGYIGHFQSVVRLMSPQN 409


>gi|255027669|ref|ZP_05299655.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J2-003]
          Length = 256

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 50/298 (16%)

Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPT 266
              D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD+ L+D++AD+RA T
Sbjct: 1   NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETDFALSDFSADVRAAT 60

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCS 324
           PT AAE+AVP    L+  L   + RL  +  + ++ K  +L  L + L        L   
Sbjct: 61  PTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQHLILNGPKHQLEQQ 120

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             R D     L +     IF K   F+ + +R+        I+  ++ +    Q +++ +
Sbjct: 121 MERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIELQKEQMTLHLQALDKAM 180

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
           KQ L+        ++                                             
Sbjct: 181 KQLLKDKQQSFFRQVDA------------------------------------------- 197

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
               L+  +  + LKRG+       N  +   + L     I +    G   A++  K 
Sbjct: 198 ----LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQVKMQGGHIGALITAKE 250


>gi|320335696|ref|YP_004172407.1| Exodeoxyribonuclease VII [Deinococcus maricopensis DSM 21211]
 gi|319756985|gb|ADV68742.1| Exodeoxyribonuclease VII [Deinococcus maricopensis DSM 21211]
          Length = 401

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 26/280 (9%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLK--DNH----SRIDAI 67
             +SEL  ++  ++   +   V VR EI+         H Y  L   D      ++    
Sbjct: 16  LELSELLGYVAQVLHQGVPGGVWVRAEIAQLTDRR---HLYLDLVQADEDGRELAKARGT 72

Query: 68  IWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118
           +W      +  +F          G+  L++  +        + + +  + P    G +  
Sbjct: 73  VWARERFALEGKFRRATGAGLTAGLRVLLMVTVEFHEQYG-FSLNVVDVAPEFTVGDMAQ 131

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ---RISCRFPLRVI 175
            L + +  L  EGL+      P+P     + V++    A + D  +   R+S    +   
Sbjct: 132 QLARLRVALEAEGLYGLNRALPLPEDFTRVLVLSPAGAAGLGDFTREADRLSRAGVVNFT 191

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235
                 QG E    +  A+ +   L         D +++ RGGG+  DL   ND  + RA
Sbjct: 192 YLSATFQGREASASLTAALAEARRLHAEEA---FDALVIIRGGGASTDLAWLNDLAVARA 248

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275
           +A    P+++ +GH  D T+ D  A +R  TP+ AA+   
Sbjct: 249 VAAFPAPVVTGLGHARDDTILDEVARVRCDTPSKAAQFIT 288



 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 1/118 (0%)

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             +   R +        A    +R   +  +      +  L  R+      ++++     
Sbjct: 283 AAQFITRVVVEAAGAAEAAYAQVRGAARAAVHEAKLSVSALRVRVLGAARARVEADAAGA 342

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
               R +     + TL RGY  ++D     +           + + F DG+    V +
Sbjct: 343 DAHMRAVLGLTPERTLARGYALVRDAAGRVVRDAAGARA-GALTLTFQDGEVRVRVDD 399


>gi|148530038|gb|ABQ82226.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 116

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/116 (41%), Positives = 76/116 (65%)

Query: 67  IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126
           ++W+G+++++   PE G+E +  GKI+++   S YQ+II+ L  +G G LL  +E+ + K
Sbjct: 1   VVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLARIERLRLK 60

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182
           L  EGLF    K  +PF+P +I V+TS  GAV+ DI   I  RFP R++++PV VQ
Sbjct: 61  LAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIGRRFPRRLLVWPVAVQ 116


>gi|325282598|ref|YP_004255139.1| Exodeoxyribonuclease VII [Deinococcus proteolyticus MRP]
 gi|324314407|gb|ADY25522.1| Exodeoxyribonuclease VII [Deinococcus proteolyticus MRP]
          Length = 402

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 123/339 (36%), Gaps = 28/339 (8%)

Query: 3   PFSQKNSLDHPE---YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLK 58
           P  ++++   P      +SEL  ++  ++   L   V VR EI+         H Y  L 
Sbjct: 6   PARRQSTEAPPPSQWLELSELLDYVGQVLGRGLPGAVWVRAEIAELTDRR---HLYLELI 62

Query: 59  D-----NHSRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIII 105
                   +R  A +W      +E             G++ L+      F     + + I
Sbjct: 63  QLEGGQQVARCRAALWARERYALEAKFRRVTGGGLGTGMKVLLFCTAE-FHAQYGFSLHI 121

Query: 106 ESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164
           + + P    G     L  ++++L  EG++      P+P     +AVI     A + D  +
Sbjct: 122 QDISPEFTLGEAAARLNAQREQLQAEGVYGLNRALPLPADYARVAVIAPEGAAGLGDFHR 181

Query: 165 R---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221
               +     L +       QG E    + +A+ +   L  G+     D +++ RGGG+ 
Sbjct: 182 EVAPLQAAGVLELHYLRATFQGREAGASLTHAVAEALALHAGQP---LDALVVIRGGGAT 238

Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
            DL   ND    RA+A    P+I+ +GH  D TL D  A LR  TP+ AA   V      
Sbjct: 239 TDLAWLNDLEFGRALARFPAPVITGLGHARDDTLPDELAALRTDTPSKAAAHIVRTVVGA 298

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            +        +              +  L   L  + Q 
Sbjct: 299 AAQAQADWQAIRRAGAEEAAGADAGVRWLRDRLRAAAQR 337



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 1/116 (0%)

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                +R +     +  A    +R             ++ L  R+      ++      V
Sbjct: 287 AAAHIVRTVVGAAAQAQADWQAIRRAGAEEAAGADAGVRWLRDRLRAAAQRQLTGAERDV 346

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
           +   R     + + TL RGY  ++      +T    L    ++ + F DG+  A +
Sbjct: 347 TALMRSAVGLSPERTLGRGYAVVRG-GGRVVTHAAELRAGEQVTLQFADGEVRAEI 401


>gi|33322198|gb|AAQ06820.1|AF496159_1 exodeoxyribonuclease large subunit [Lactobacillus delbrueckii
           subsp. lactis]
          Length = 157

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%)

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187
           +EGLF+ +HK P+P  P  IAV+TS +GAVI DI+   + RFP   + +FP +VQG+   
Sbjct: 1   KEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGESAA 60

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
             + +A+ Q+    +       D++I+ RGGGS+EDLW FN+E +VR +    +P+IS++
Sbjct: 61  GSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMKMPVISSV 115

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
           GHETD TL D AAD RA TPT AAEMA P    +++ + +  
Sbjct: 116 GHETDTTLCDLAADCRAATPTAAAEMATPALTPVRAEMASCR 157


>gi|330874753|gb|EGH08902.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 221

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 47/256 (18%)

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SA+GHETD +++D+ AD+RAPTP+ AAE+  P                            
Sbjct: 1   SAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSD------------------------ 36

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                                 R+D L R L   ++  + R+      I  R++      
Sbjct: 37  -------------------LHRRVDSLHRRLVSRMQDRLMRERLRLEGISRRLR--HPGE 75

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++  Q + +    + +  +Q++    +      + L    +     + +L   +  L 
Sbjct: 76  RLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAA--QHPGRTLGFLRQRLDALA 133

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            R+   +  +IK+    +    + L   +   TL RGY+ + D   + I       T  R
Sbjct: 134 ERLPRAIREQIKARRLQLQSQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTRTGQR 193

Query: 485 ILINFFDGQANAIVIN 500
           +     +G+    V +
Sbjct: 194 LTARLGEGELQVRVED 209


>gi|15805222|ref|NP_293910.1| exodeoxyribonuclease VII large subunit [Deinococcus radiodurans R1]
 gi|14194738|sp|Q9RXW9|EX7L_DEIRA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gi|6457855|gb|AAF09773.1|AE001881_2 exodeoxyribonuclease VII large subunit, putative [Deinococcus
           radiodurans R1]
          Length = 416

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 104/285 (36%), Gaps = 31/285 (10%)

Query: 15  YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS----------R 63
             ++EL  ++  ++   +   V VR EI+         H Y  L               +
Sbjct: 28  LELAELLDYVGQVIARGVPGGVWVRAEIASLTDRR---HLYLDLVQAGEGGAGGVGEVAK 84

Query: 64  IDAIIW---------KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113
             A +W         K            G++ L+ G    F     +   +  + P    
Sbjct: 85  CRATVWARERFALEAKFRGATSGATLSAGLKVLLFGTAE-FHPQYGFSFNVLDISPEYTL 143

Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR---ISCRF 170
           G     LE  + +L+ EG +      P+P     +AVI     A + D  +    +    
Sbjct: 144 GDAALRLEAMRAELVAEGSYGLNRLLPVPTDFARVAVIAPREAAGLGDFRREADPLEAAG 203

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            +         QG E    +  A+     L + +     D + + RGGG++ DL   ND 
Sbjct: 204 LVEFHYLEATFQGREAGASLLRAVAAARELHQEKA---LDALFVIRGGGAVTDLAWLNDL 260

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275
            + RA+A    P+++ +GH  D TL D  A LR  TP+ AA   V
Sbjct: 261 ELARALATFPAPVVTGLGHARDDTLPDEVACLRTDTPSKAAAYLV 305



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%)

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
             R       + TL RGY  ++D     +T+         + + + DG     V
Sbjct: 362 LMRQALGLTPQRTLARGYALVRDAAGQPVTRAAGARAGEPLTLEWSDGSVPVRV 415


>gi|2367603|gb|AAB69700.1| unknown [Helicobacter pylori]
          Length = 82

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/79 (41%), Positives = 50/79 (63%)

Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73
            SVSE++  +K ++E+    V V+GE+S       SGHAYFSLKD+ S I  +++KG  
Sbjct: 4  VLSVSEINAQIKALLETTFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 63

Query: 74 NKIEFLPEEGIEFLVIGKI 92
          N+++F  +EG E +V G I
Sbjct: 64 NRLKFALKEGQEMVVFGGI 82


>gi|94984256|ref|YP_603620.1| exodeoxyribonuclease VII large subunit [Deinococcus geothermalis
           DSM 11300]
 gi|94554537|gb|ABF44451.1| Exodeoxyribonuclease VII [Deinococcus geothermalis DSM 11300]
          Length = 413

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 130/369 (35%), Gaps = 30/369 (8%)

Query: 23  HLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLK---D--NHSRIDAIIWKGTLNKI 76
           ++  ++   +   V VR E++         H Y  L    D    ++  A +W      +
Sbjct: 27  YVGQVIARGVPGAVWVRAEVASLTDRR---HLYLDLVQLEDGVEVAKCRATVWARERFAL 83

Query: 77  --EFL-------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126
             +F           G++ L+      F     + + +  + P    G     L+  ++ 
Sbjct: 84  EGKFRRATGGGSLTAGLKVLLFCTAE-FHPQYGFSLNVLDVAPEFTLGDAALKLDALRET 142

Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR---ISCRFPLRVIIFPVKVQG 183
           L  EG++      P P     +AVI+    A + D  +    +     +R +      QG
Sbjct: 143 LTREGVYGLNRTLPAPTDFVRVAVISPAEAAGLGDFRRETDALEAAGIVRFLYLEATFQG 202

Query: 184 DECPKEIANAILQLNTLKEGRTCPRP-DIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
            E    ++ A+       E  T   P D +++ RGGG++ DL   ND  + RA+A   +P
Sbjct: 203 REASASLSGAVAAARAAHEAETLGGPLDALVVIRGGGAVTDLAWLNDLAVARALATFPVP 262

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
           +I+ +GH  D TL D  A +R  TP+ AA + V       +        +       +  
Sbjct: 263 VITGLGHARDDTLLDEMACIRTDTPSKAAALIVRTVMAAAAQAQEDIRTIRAHARNTLVN 322

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                  L       D+ L  +R + D    + +  +   +             +  D  
Sbjct: 323 AEAGARWL------LDRLLGSARRQTDAAQAQTDALMRQTLGLTPERTLARGYVLVRDAQ 376

Query: 363 IHNIQKNRQ 371
              + +  Q
Sbjct: 377 GQPVTRAAQ 385



 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R +     +    +  +R   +N +       + L+ R+      +  +         R 
Sbjct: 296 RTVMAAAAQAQEDIRTIRAHARNTLVNAEAGARWLLDRLLGSARRQTDAAQAQTDALMRQ 355

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
                 + TL RGY  ++D     +T+   +     + + F DGQA        P +
Sbjct: 356 TLGLTPERTLARGYVLVRDAQGQPVTRAAQVDGGQILTLEFADGQAEVRAERTDPQR 412


>gi|308446580|ref|XP_003087215.1| hypothetical protein CRE_21712 [Caenorhabditis remanei]
 gi|308259572|gb|EFP03525.1| hypothetical protein CRE_21712 [Caenorhabditis remanei]
          Length = 389

 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 142/386 (36%), Gaps = 15/386 (3%)

Query: 76  IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128
           ++F  E G+E       L+  K   F     + + IE++  S   G +    ++  ++L 
Sbjct: 3   LKFERESGVELSRDLNVLIKVKA-VFSPQYGFSVNIEAIDSSYTLGDIARRYQQILERLT 61

Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDE 185
            EGL +     P PF  + + VI     A + D       +        +      QG+ 
Sbjct: 62  SEGLLNKNKLLPTPFDIQNVLVIAPENAAGLGDFKKDADALDQAGVCHFVYHTATFQGNT 121

Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245
               I+ A+              PD+I++ RGGG++ DL + ND  +   +   S+PI  
Sbjct: 122 AATSISEALANALRQWAKDLNTPPDLIVIIRGGGAVNDLAYLNDYNLAALLCKRSVPIWV 181

Query: 246 AIGHETDWTLADYAADLRAPTPTGAA-EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
            IGHE D T+ D  A+    TP+     +   + E  Q  L +L         ++  Y+ 
Sbjct: 182 GIGHEKDRTILDEVANRSFDTPSKVIGGIRNLIVERTQDVLDSLHKIKLLSQHQITAYQS 241

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                +      S   ++ +   LD +   +++  + +I         ++         H
Sbjct: 242 QNDQYIKVIKTLSQGQINEANKSLDLMKGTVQYLAQQLIKLASNQVESLMRETLLQNPRH 301

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + K    +    + I  I +    +I  + +       +L++  +         I  L+
Sbjct: 302 VMAKGYAIVRSDGKAIRSIQQISTDHI--QVELLDEGYDVLKKNAELLESQEEPDIDNLM 359

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQ 450
             +E  +S   K+C + V    + L 
Sbjct: 360 KIVEESMSAY-KACKSRVDAVQQALN 384



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 45/121 (37%), Gaps = 2/121 (1%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   +    + +I       I   + +    + +++  ++ +I   +  +  +   ++++
Sbjct: 216 ERTQDVLDSLHKIKLLSQHQITAYQSQNDQYIKVIKTLSQGQINEANKSLDLMKGTVQYL 275

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
               IK     V    R       ++ + +GY  ++ ++   I   + ++T   I +   
Sbjct: 276 AQQLIKLASNQVESLMRETLLQNPRHVMAKGYAIVR-SDGKAIRSIQQIST-DHIQVELL 333

Query: 491 D 491
           D
Sbjct: 334 D 334


>gi|160902472|ref|YP_001568053.1| exonuclease VII large subunit [Petrotoga mobilis SJ95]
 gi|160360116|gb|ABX31730.1| Exonuclease VII large subunit [Petrotoga mobilis SJ95]
          Length = 467

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 85/419 (20%), Positives = 153/419 (36%), Gaps = 57/419 (13%)

Query: 89  IGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP-KI 147
            G +  +   +KY +   S+IP G+  +    ++  +KL +  L        I   P K 
Sbjct: 99  QGVVNFWKREAKYVVSGSSIIPLGASEIEKKKKEILEKLEKSNLLRKVEHELIELDPIKK 158

Query: 148 IAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPKEIANAILQLNTLKEGRTC 206
           IAVITSPT A   D  + I+    + ++ ++P  +QG E    I  A+  +       + 
Sbjct: 159 IAVITSPTAAGFGDFQKNINHSRFIPIVHLYPAPMQGAETVPGIKKALFAILK-----SG 213

Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVR--AIANSSIPIISAIGHETDWTLADYAADLRA 264
              D++++ RGGGS  DL +F+D  +    A  N  IP+++ IGHE D T+ D+ +    
Sbjct: 214 IDYDVVVIIRGGGSKSDLMYFDDFELGSLIAKFNRKIPVLTGIGHEQDSTIPDFVSWKNY 273

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
            TPT  +   V    +   +L  LE  +      +                         
Sbjct: 274 STPTEVSRDIVNQINYFTDNLETLEKNITYSFTNV------------------------Y 309

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
               + L     +N++  + R      ++   +  D L  NI +    ++E  +      
Sbjct: 310 YQMENLLSFNTINNIKYYLSR---ELINLFRTLDEDHL--NITRKVNQMIESSE------ 358

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
                     K   +  L  ++   +  I   + +I      I   L  K +     +  
Sbjct: 359 ----------KSISLNKLDYIQRFIEYSIKTYNQNIISTTNEIVSELKSKFEVSERLLFS 408

Query: 445 TTRILQSFAY-KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           T + L   +     L  G   +       I     L TK  + + F DG+A + +    
Sbjct: 409 TFQELTKSSPFAAFLNNG--VLVKKGEEIIDSVEKLQTKDEVKLIFKDGEAESSIEKIQ 465


>gi|226357347|ref|YP_002787087.1| exodeoxyribonuclease VII large subunit [Deinococcus deserti VCD115]
 gi|226319337|gb|ACO47333.1| putative Exodeoxyribonuclease VII large subunit [Deinococcus
           deserti VCD115]
          Length = 402

 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 122/360 (33%), Gaps = 28/360 (7%)

Query: 1   MNPFSQKNSLDHPE---YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFS 56
           M    +K     P      ++++  ++  ++   +   V VR E+          H Y  
Sbjct: 1   MTGRKRKKDTARPPEQFLELADVLTYVGQVIARGVPGGVWVRAELVSVTDRR---HLYLD 57

Query: 57  LK---D--NHSRIDAIIWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQI 103
           L    D    +R  A IW      +  +F          G++ L+      F     + +
Sbjct: 58  LVQLEDGVEVARCRATIWARERFSLEGKFRKATGGTLTAGVKVLLFCTAE-FHAQYGFSL 116

Query: 104 IIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDI 162
            +  + P    G     L   ++ LL EG++      P P     +AVI     A + D 
Sbjct: 117 NVIDIAPEFTLGDAALKLGALRQALLLEGVYGLNRLLPAPSDFTRVAVIAPVEAAGLGDF 176

Query: 163 LQR---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219
            +    +     +R        QG E    +  A+ Q  ++         D +++ RGGG
Sbjct: 177 RREADALEAAGLVRFEYLEATFQGREASASLTRAVEQARSMHVQEP---LDALVVIRGGG 233

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
           ++ DL   ND    RA+A    P+I+ +GH  D TL D  A +R  TP+ AA + V    
Sbjct: 234 AVTDLAWLNDLDFARALATFPAPVITGLGHARDDTLPDEVASIRTDTPSKAAALIVRTVV 293

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
              +        +     +L+          +     + +  +                L
Sbjct: 294 QAAAQAQEDARTIRAHATQLLLDADAGATWAVDRAVQAARRATDHAQAQTDALMRQALGL 353



 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 27/109 (24%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R +     +       +R      +          + R                    R 
Sbjct: 290 RTVVQAAAQAQEDARTIRAHATQLLLDADAGATWAVDRAVQAARRATDHAQAQTDALMRQ 349

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
                   TL RGY  ++D +   +T+   +     + + F DG     
Sbjct: 350 ALGLTPARTLARGYALVRDADGQPVTRAAQVGEAQDLTLEFHDGAVQVR 398


>gi|262368417|ref|ZP_06061746.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046]
 gi|262316095|gb|EEY97133.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046]
          Length = 329

 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 109/305 (35%), Gaps = 8/305 (2%)

Query: 86  FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144
             V  K   F     + + +E +  S   G +    ++  ++L  EGL +     P PF 
Sbjct: 2   VKVRAK---FDPQYGFSVNVEDIDSSYTLGDIARRYQQILERLTSEGLLNKNKLIPTPFD 58

Query: 145 PKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLK 201
            + + VI     A + D       +          +    QG+   + I  ++       
Sbjct: 59  IQNVLVIAPENAAGLGDFKKDADALEKSGVCHFKYYSATFQGNTAAQSIITSLSNGLREW 118

Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261
                  PD+I++ RGGG++ DL + ND  +   +A  ++PI   IGHE D T+ D  A+
Sbjct: 119 ATDFNTPPDLIVIIRGGGAVNDLAYLNDYELAALLAKRTVPIWVGIGHEKDRTILDEVAN 178

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ-T 320
               TP+        +       +++    +  +    I    +  +  ++ +       
Sbjct: 179 RSFDTPSKVIGGIRNLIADRTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQ 238

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           ++ +   +D +   L +  +  I         ++         + + K    +  + + I
Sbjct: 239 INEANKSVDLMRSTLHYLAQQQIKLATNQVESLMRETLIQNPRNVMAKGYGIVRNEGKAI 298

Query: 381 EQIVK 385
             I +
Sbjct: 299 RSIQQ 303



 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 6/132 (4%)

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
              +     + I       I   + +    + M++     +I   +  +  + + + ++ 
Sbjct: 198 RTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLA 257

Query: 432 SHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
             +IK     V    R  ++     +N + +GY  +++     I   + ++   ++ +  
Sbjct: 258 QQQIKLATNQVESLMR--ETLIQNPRNVMAKGYGIVRNE-GKAIRSIQQIS-GDKVQVEL 313

Query: 490 FDGQANAIVINK 501
            DG   A V   
Sbjct: 314 QDGTIQANVTKV 325


>gi|262371556|ref|ZP_06064863.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046]
 gi|262313513|gb|EEY94573.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046]
          Length = 329

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 112/316 (35%), Gaps = 8/316 (2%)

Query: 86  FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144
             V  K   F     + + +E +  S   G +    ++  ++L  EGL +     P PF 
Sbjct: 2   VKVRAK---FDPQYGFSVNVEDIDSSYTLGDIARHYQQILERLTSEGLLNKNKLVPTPFD 58

Query: 145 PKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLK 201
            + + VI     A + D       +          +    QG+   + I  ++       
Sbjct: 59  IQNVLVIAPENAAGLGDFKKDADALEKSDVCHFKYYSATFQGNTAAQSIITSLSNGLRQW 118

Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261
                  PD+I++ RGGG++ DL + ND  +   +A  ++PI   IGHE D T+ D  A+
Sbjct: 119 ATDFNTPPDLIVIIRGGGAVNDLAYLNDYELAALLAKRTVPIWVGIGHEKDRTILDEVAN 178

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ-T 320
               TP+        +       +++    +  +    I    +  +  ++ +       
Sbjct: 179 RSFDTPSKVISGIRNLIAERTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRVIKTLAHGQ 238

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           ++ +   +D L   L +  +  I         ++           + K    +  + + I
Sbjct: 239 INEANKSVDLLRSTLHYLAQQQIKLATNQVESLLRETLIQNPRTVMAKGYGIVRSEGKAI 298

Query: 381 EQIVKQHLRYIFLEKK 396
             I +     I +E +
Sbjct: 299 RSIQQISGDSIQVELQ 314



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 6/133 (4%)

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +   +     + I       I   + +    + +++     +I   +  +  L + + ++
Sbjct: 197 ERTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRVIKTLAHGQINEANKSVDLLRSTLHYL 256

Query: 431 LSHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
              +IK     V    R  ++     +  + +GY  ++      I   + ++    I + 
Sbjct: 257 AQQQIKLATNQVESLLR--ETLIQNPRTVMAKGYGIVRSE-GKAIRSIQQIS-GDSIQVE 312

Query: 489 FFDGQANAIVINK 501
             DG   A V   
Sbjct: 313 LQDGTIQANVTKV 325


>gi|311114366|ref|YP_003985587.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC
           14019]
 gi|310945860|gb|ADP38564.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC
           14019]
          Length = 208

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)

Query: 3   PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61
           P    ++     + VS +S      VE       V G+I       S SG  Y +L+D++
Sbjct: 41  PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 97

Query: 62  SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             I  +I+      +      +G   +V GK   +  +++   + + +   G+G L   +
Sbjct: 98  EDISISIMGFSKFVQQSKDLRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 157

Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166
           ++ +KKL  EGLF  ++K P+P  PK I ++ +P       +LQ  
Sbjct: 158 DELRKKLKGEGLFDVENKVPLPEFPKCIGLVCAPQARARGMLLQTS 203


>gi|218658557|ref|ZP_03514487.1| exodeoxyribonuclease VII large subunit [Rhizobium etli IE4771]
          Length = 158

 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 3/161 (1%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ + E+    E+ V++ L           AIL  L  + K +       +  L    +
Sbjct: 1   RRQTLNERMARAERTVERLLDRSKSRIDRAEAILASLPARLKTQTDRGRERLGNLTRHAD 60

Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
             + H++      +S   R+LQS +YKN LKRGY  I+D ++  ++Q   L+  T I I 
Sbjct: 61  TAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAATLSAGTGIAIE 120

Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           F DG+  A+      P     K  + ++  R  +   G LF
Sbjct: 121 FADGRVGAMTTESGAPPAGAKKAQRQNSQSRRSK---GSLF 158


>gi|322387925|ref|ZP_08061532.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC
           700779]
 gi|321141198|gb|EFX36696.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC
           700779]
          Length = 237

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 101/281 (35%), Gaps = 45/281 (16%)

Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284
             FN+E++VR+I  S +PIIS++GHETD TLAD+ AD RA TPT AAE+A PV +    +
Sbjct: 1   MAFNEEIVVRSIFESRLPIISSVGHETDVTLADFVADKRAATPTAAAELATPVTKLDLLT 60

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
                                                      L    + +   ++  + 
Sbjct: 61  Y------------------------------------------LKNQEKRMATAVQNTLS 78

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           +K      +   +             Q + +    ++Q +   L     + + +I  L  
Sbjct: 79  KKKEALRGLSQSVIFRQPERLYDGYLQRLDQLVLRLKQGLNGELVRNQQKVQAQIHRLEQ 138

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464
           L      +I      I++L   +   ++    +    V   +  L        + RGY  
Sbjct: 139 L--SPNVKIQRYQDRIQQLQKLMRSQMAVIYDAKVAEVKRLSEALLMLDTSRIVARGYAI 196

Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           ++  +   ++   +L    ++++   DG     V +    +
Sbjct: 197 VKKED-TVVSSANDLKKNDQVMLMMRDGHVELEVKDVKTEE 236


>gi|311114367|ref|YP_003985588.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC
           14019]
 gi|310945861|gb|ADP38565.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC
           14019]
          Length = 258

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 11/222 (4%)

Query: 150 VITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208
           +  S +     D++  ++ R+P+ R  +    VQG +CP ++  AI QL+        P 
Sbjct: 1   MCASSSRQG--DVITNVNLRWPVTRFKVVHAHVQGVQCPADVIAAIKQLDA------DPE 52

Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268
            D+II+ARGGGS EDL  F+DE +VRA A    PI+SAIGHE DWTL D AAD+RA TPT
Sbjct: 53  VDVIIVARGGGSFEDLIGFSDEGVVRATAACVTPIVSAIGHEDDWTLIDLAADMRASTPT 112

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRY 326
            AA+  VP        + N        I   +  +I  +        L      L     
Sbjct: 113 DAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIEGYANRPSLTRPSTMLEPHEL 172

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +    + H L  ++             I +      + +
Sbjct: 173 FVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTLNR 214



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 53/166 (31%), Gaps = 5/166 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402
                    +   +++       ++    + E+ Q I+  ++     I      +I ++ 
Sbjct: 93  HEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIE 152

Query: 403 ----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                    +    +      +++ + R+   L   +     +V      + + + ++TL
Sbjct: 153 GYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTL 212

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
            RGY  +Q +    +     + T   I +    G   A V +    
Sbjct: 213 NRGYAVVQISGGKVLDDSSRVKTGDDITVTLKSGLITASVTSVEKS 258


>gi|270610592|ref|ZP_06221683.1| exonuclease VII, large subunit [Haemophilus influenzae HK1212]
 gi|270318059|gb|EFA29322.1| exonuclease VII, large subunit [Haemophilus influenzae HK1212]
          Length = 154

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 58/157 (36%), Gaps = 4/157 (2%)

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              + +  RK +    +  R+++    + ++  +    +    ++  +    R     ++
Sbjct: 1   MAFDRLFTRKSQRLKQLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAML---RQFENTQQ 57

Query: 397 EKIAILHMLREQTKN-RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           +  A+   L++     RI      +++L  R+ F ++ ++      ++     L   +  
Sbjct: 58  KFTALSVRLKQNPLPYRIQRYQQGLEQLKVRLNFCVNRQVTERQNKLATLCGKLDGLSPL 117

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492
             L RGY+  ++     I   +++     I     DG
Sbjct: 118 KVLARGYSIAENPQGKAIVSVKDVNQGDFITTQVADG 154


>gi|5306202|gb|AAD41967.1| exonuclease VII [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 124

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 44/115 (38%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R     ++++     + ++  + RI    + I++L  R+   +  ++             
Sbjct: 8   RIKQANQRQQCVSQRLSQQNPQPRIHRAQSRIQQLEYRLTENIRSRLSEQRERFGNAVTH 67

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           L++ +   TL RGYT    T+   + + + +     +     DG   + V +  P
Sbjct: 68  LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 122


>gi|207093403|ref|ZP_03241190.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 165

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 3/167 (1%)

Query: 151 ITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209
           ITS   A   D+ +  S R+P+  ++     +QG+ C + +   I   ++     T    
Sbjct: 1   ITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVEGIAYADSFH--GTKNAF 58

Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
           D I++ARGGGS+EDL+ FNDE I  A+  +    +SAIGHE+D+ L+D  ADLRA TP+ 
Sbjct: 59  DAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTPSN 118

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           A E+ +P  +     L     +L+     L+  K   L  L  +L  
Sbjct: 119 AMEILLPNSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAASLKR 165


>gi|330813631|ref|YP_004357870.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486726|gb|AEA81131.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 247

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 160 RDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219
            DI+ RI  RF   + +FP+ VQG +  +EI   +   N           D++I+ARGGG
Sbjct: 1   MDIVDRIKNRFSTHLELFPISVQGAKSAEEIVLGVNFFN------NHSDVDLVIIARGGG 54

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
             ED   FNDE +VRA+  S IPIISAIGHETD+TL D+ AD+RA TPT AAEMAVP   
Sbjct: 55  GAEDFLPFNDENVVRAVFQSKIPIISAIGHETDFTLLDFVADVRAATPTAAAEMAVPEMR 114

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEH 337
           +LQ  L +L   L   I  + K     L+ L K L   + +  +  ++  L  L + L++
Sbjct: 115 NLQRQLNDLFKNLKFTIELVFKSANEELHGLSKFLNKKSLENFIKDNKKTLLMLSKNLQY 174

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               +I  K    N+   R+ +  +   +++
Sbjct: 175 FAHNLIKEKNVKINNYFLRLDNLSIQKVLKR 205



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 58/164 (35%), Gaps = 5/164 (3%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                     +  +++       +     +   Q+ +  + K     I L  K     LH
Sbjct: 84  HETDFTLLDFVADVRAATPTAAAEMAVPEMRNLQRQLNDLFKNLKFTIELVFKSANEELH 143

Query: 404 -----MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                + ++  +N I      +  L   +++   + IK  +  ++     L + + +  L
Sbjct: 144 GLSKFLNKKSLENFIKDNKKTLLMLSKNLQYFAHNLIKEKNVKINNYFLRLDNLSIQKVL 203

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
           KRG+  ++   +  I +  N+  +  + I F DG   A +  K 
Sbjct: 204 KRGFAIVRGAKDKKIIKSSNVNKEHLVNIEFCDGVLTAKIQKKQ 247


>gi|213025445|ref|ZP_03339892.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 118

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 45/115 (39%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           R     ++++     + ++  + RI  + + I++L  R+   +  ++             
Sbjct: 2   RIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYRLTENIRSRLSEQRERFGNAVTH 61

Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           L++ +   TL RGYT    T+   + + + +     +     DG   + V +  P
Sbjct: 62  LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 116


>gi|33322690|gb|AAQ07079.1|AF496392_1 exodeoxyribonuclease large subunit [Lactobacillus delbrueckii
           subsp. lactis]
          Length = 146

 Score =  104 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 2/144 (1%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                ++  Q + +  Q + Q+++  ++    +       L    +    RI  L     
Sbjct: 5   PQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQH--QAPDRRIKQLKQENS 62

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
            L   +E  +   ++    +     + L  ++   TL RGY+   D + N +   + LA 
Sbjct: 63  YLAKSLEMGIKRILEQKQAACRQAVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQLAP 122

Query: 482 KTRILINFFDGQANAIVINKAPPK 505
             ++ ++  DGQA   +      K
Sbjct: 123 GDQVRLHLKDGQAIGRIEEIKEGK 146


>gi|294140152|ref|YP_003556130.1| hypothetical protein SVI_1381 [Shewanella violacea DSS12]
 gi|293326621|dbj|BAJ01352.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 178

 Score =  103 bits (257), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 74/163 (45%), Gaps = 2/163 (1%)

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           + + +    +     N + +R++       +Q+  Q   E Q  ++  + + L  + L++
Sbjct: 17  KQSWQHYQLKANSRMNTLTHRLQRQDPNRRLQQYGQSFDEMQFRLDAAIDKKLTSLALKQ 76

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           ++    L+  ++   N++      +  L +R++  +  K+ S  +S+S++   LQ+ +  
Sbjct: 77  QQLSHRLN--QQSPANKLELESQRLSYLTSRLKDSIKEKLASSESSLSVSAHQLQTVSPL 134

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498
            TL RGY+  QD+    + +  +++    +     +G+  + V
Sbjct: 135 ATLSRGYSITQDSKGKVLLKASDVSVGDMLTTRLLEGEVQSKV 177


>gi|330722416|gb|EGH00260.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium
           IMCC2047]
          Length = 166

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 4/164 (2%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           ++  +    R  +HI  R++       +Q+  Q + + +  ++  +   L+    +    
Sbjct: 1   MQRRLIEARRQLDHISKRLR--HPGQQLQEQAQRLDDMEARLKTAITSQLKLHSAQLATH 58

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            A L     Q K+++  L+   ++L  R++  +  ++ +    +   +  L + +   TL
Sbjct: 59  SATLEAC--QPKHQVARLNMTNQQLSQRLQRAMQQQLSALRQRLKGNSLALNTLSPLQTL 116

Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            RGY  I+D     +     L    ++      GQ +  V    
Sbjct: 117 GRGYAIIKDEQQQIVRNSEQLQIGDKVSAQLGKGQIHCAVEAIE 160


>gi|224437548|ref|ZP_03658506.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG
           18818]
          Length = 113

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
           +  +I+KG  +K+ F  +EG+  +V G ++ +    +YQI    ++P G G L    ++ 
Sbjct: 1   MRCVIFKGNASKLRFQMQEGLNLIVRGSVSAYIPRGEYQINCLEVLPDGIGELSLTYQQL 60

Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
           K  L   G F ++    IP  PK +AV+TS TGAVI DI + 
Sbjct: 61  KTSLQARGYFDNKKP--IPAFPKRVAVLTSITGAVIEDIKKS 100


>gi|269962403|ref|ZP_06176753.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832899|gb|EEZ87008.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 87

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 39/86 (45%)

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +    + + ++  ++   +  K+ +    ++I    L + +   TLKRGY+  Q      
Sbjct: 1   MAEQKSKLDRVEQKLLDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQV 60

Query: 473 ITQKRNLATKTRILINFFDGQANAIV 498
           +TQ +++ T   ++    DG+  + V
Sbjct: 61  VTQAKDVKTGDVLVTRLSDGELRSTV 86


>gi|253576320|ref|ZP_04853650.1| exodeoxyribonuclease VII [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844213|gb|EES72231.1| exodeoxyribonuclease VII [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 134

 Score = 94.8 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 41/123 (33%), Gaps = 1/123 (0%)

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
               R       +      +LR   ++ + +     ++    +   +   ++   + ++ 
Sbjct: 2   HMQTRLQLAGAAKDRLHQRLLRFHPRDALQFAGRRRREADRLLRQAMQGILREKSSQLAS 61

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFDGQANAIVINKAP 503
             R L + +    + RGY+ + D      I    ++    RI +   DG+ +  V    P
Sbjct: 62  GIRHLDALSPLKVMARGYSLVYDERGERIIKSLSDVELGDRITVKVTDGELDCQVWGMRP 121

Query: 504 PKE 506
              
Sbjct: 122 EGA 124


>gi|218670477|ref|ZP_03520148.1| exodeoxyribonuclease VII large subunit [Rhizobium etli GR56]
          Length = 197

 Score = 93.7 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 74/197 (37%), Positives = 108/197 (54%)

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
           +RA A S IP+ISA+GHETDWTL D+AAD+RAPTPTGAAEMAVPVK  L++ L  L ARL
Sbjct: 1   MRAAAESRIPLISAVGHETDWTLIDFAADVRAPTPTGAAEMAVPVKAELEAQLAALAARL 60

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              + R +  +  ++  L++ALP+ DQ L+  R R D     L   LE+    K R F  
Sbjct: 61  QGCMSRQMDQRRQSVRGLMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTVNKRRGFER 120

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           +   ++ D L + I + RQ + E+    E++V++ +       +   AIL  L  + K +
Sbjct: 121 VAAHLRPDVLSNRIAERRQRLNERMVRAERMVERLIDRSTSRVQRAEAILASLPARLKTQ 180

Query: 413 IFYLHTHIKKLITRIEF 429
                  +  L    + 
Sbjct: 181 TDRSRERLGNLSRHADT 197


>gi|284800114|ref|ZP_06390543.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703]
 gi|284795978|gb|EFC51325.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703]
          Length = 122

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 42/109 (38%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
           +        +  +  +     +I +  T +       +     S+     +L++ + ++ 
Sbjct: 11  RFERQTQTLKHCRPDVSIYKHNIDRFQTALSHSFRQLLVQRCQSLIAQAALLEAVSPQHI 70

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
           L+RG++ +++T    I     L    ++ I F DG+ +  V  +    E
Sbjct: 71  LERGFSVVKNTRGQVIRNADTLKQGQKLHITFADGETDVRVTKEQAQGE 119


>gi|296537082|ref|ZP_06899053.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296262591|gb|EFH09245.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 172

 Score = 90.6 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 25/163 (15%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ + ++ + +        R +   K+  +  +       +  +      +  L  R  
Sbjct: 14  ARQRLDDRAERLA----MAPRALLSAKRAALDAIAPRLPHPRESLAGHRHSLALLQQRGA 69

Query: 429 FILSHKIKS---------------------CHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
             L  ++                         T +      L+  +Y+  L RG+  ++ 
Sbjct: 70  AALQRQLDRSQTALHRLPDPRTRLESRLREARTRLEGLAFRLEGASYQGVLARGFALVRA 129

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510
            +   +T    +A   R+ + F DG       + AP    P +
Sbjct: 130 ESGEPVTSAAGIAAGARLSLTFQDGARMVTADDTAPGPAAPPR 172


>gi|224437549|ref|ZP_03658507.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG
           18818]
          Length = 172

 Score = 89.8 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 2/142 (1%)

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
              VQG++  + IA  I  +++     T    D+II+ RGGGS+EDLW FN+E++  AI 
Sbjct: 3   NTLVQGEKAKESIATNIAYIDSFF--GTPKGFDVIIIGRGGGSMEDLWAFNEEIVADAIY 60

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
           N+ IPIISA+GHE+D  ++DY AD+RAPTP+ A EM +P    L   + +      N I 
Sbjct: 61  NARIPIISAVGHESDTVISDYVADMRAPTPSAAIEMLLPAPNALTQGITHRFECATNDIK 120

Query: 298 RLIKYKINTLNSLLKALPNSDQ 319
           +L           L A    ++
Sbjct: 121 QLCNAINARDPQRLGAFVQIEK 142


>gi|299532331|ref|ZP_07045723.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           S44]
 gi|298719569|gb|EFI60534.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni
           S44]
          Length = 209

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 4/148 (2%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           ++     + +   + +  Q +    Q + +  +Q  R      ++       LR     +
Sbjct: 62  LMQDRLDNAVQRVLDRQAQRLDIAAQRLGRPSEQLARNQLQLSRQ----AQRLRHSMLLK 117

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +  L    + +      I    ++    ++      LQ    +  L+RGY  + D     
Sbjct: 118 LQRLAQSQQAIQVSFPNIFQRSLEQQRQTLDRIDLRLQLLDPRLVLQRGYALLTDQQGRP 177

Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500
           +TQ R     T +     DG  + +V  
Sbjct: 178 VTQVRQAVPGTALKAQLSDGAVDVVVTQ 205



 Score = 77.1 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 1/158 (0%)

Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285
            FNDE + R I  S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+    +E    +L
Sbjct: 1   AFNDEQLARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGAL 60

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
             ++ RL+N + R++  +   L+   + L    + L+ ++ +L R  + L H++ + + R
Sbjct: 61  GLMQDRLDNAVQRVLDRQAQRLDIAAQRLGRPSEQLARNQLQLSRQAQRLRHSMLLKLQR 120

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
                   I     +    ++++ RQ +      ++ +
Sbjct: 121 -LAQSQQAIQVSFPNIFQRSLEQQRQTLDRIDLRLQLL 157


>gi|313144002|ref|ZP_07806195.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG
           18818]
 gi|313129033|gb|EFR46650.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG
           18818]
          Length = 167

 Score = 87.9 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240
           +QG++  + IA  I  +++     T    D+II+ RGGGS+EDLW FN+E++  AI N+ 
Sbjct: 1   MQGEKAKESIATNIAYIDSFF--GTPKGFDVIIIGRGGGSMEDLWAFNEEIVADAIYNAR 58

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           IPIISA+GHE+D  ++DY AD+RAPTP+ A EM +P    L   + +      N I +L 
Sbjct: 59  IPIISAVGHESDTVISDYVADMRAPTPSAAIEMLLPAPNALTQGITHRFECATNDIKQLC 118

Query: 301 KYKINTLNSLLKALPNSDQ 319
                     L A    ++
Sbjct: 119 NAINARDPQRLGAFVQIEK 137


>gi|167580077|ref|ZP_02372951.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           TXDOH]
          Length = 156

 Score = 87.5 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF---LEKKEKIAILHMLREQTKNRIFYLH 417
           +L   +    + +  +  H+ Q+  +          + + + A++ +  ++ +  +    
Sbjct: 4   WLARRLISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARPDVAPAR 63

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQK 476
             +  L  R++  L  +++     V+     L+  + + TL+RGY   I       +   
Sbjct: 64  QVLATLAQRLDATLRRRVERDTARVAACAARLEVLSPQRTLERGYAALIDTQTGRAVRAP 123

Query: 477 RNLATKTRILINFFDGQANAIVINKAP 503
             L  + R+ ++  +G A+  + +  P
Sbjct: 124 AALKPQRRLTVHLAEGSADVSLADVQP 150


>gi|270690417|ref|ZP_06222894.1| Exonuclease VII, large subunit [Haemophilus influenzae HK1212]
 gi|270316108|gb|EFA28111.1| Exonuclease VII, large subunit [Haemophilus influenzae HK1212]
          Length = 146

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 2/140 (1%)

Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272
           I+ RGGGS+EDLW FN+E + RAI  S++PIISA+GHETD T+AD+ ADLRAPTP+ AAE
Sbjct: 1   IVGRGGGSLEDLWCFNEEDVARAIFRSTLPIISAVGHETDVTIADFVADLRAPTPSAAAE 60

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDR 330
           +    ++ L   L + + RL+    RL   K   L  L   L   +    L   + + ++
Sbjct: 61  LVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLKQLALRLQNQHPQNQLRAQQAKNEQ 120

Query: 331 LPRELEHNLEIIIFRKYRHF 350
           L   L+  +        + F
Sbjct: 121 LTHRLQLAMLRQFENTQQKF 140


>gi|167569042|ref|ZP_02361916.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis
           C6786]
          Length = 124

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 48/115 (41%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + A++ +  ++ +  +      +  L  R++  L  + +     V+     L
Sbjct: 4   RPVRDARARFALVQLRWQRARPDLTQARQMLATLAQRLDTALQRRHERDAARVTACAARL 63

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +     L  + R+ ++  +G A+  + +  P
Sbjct: 64  EVLSPRRTLERGYAALIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 118


>gi|148530039|gb|ABQ82227.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 157

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 8/160 (5%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L  ++       +   +R+         ++    +  ++      +    R   L     
Sbjct: 3   LPSLLGTARMRLDDRGHRLDMALPALVARRRAALLSVERAMPSASLLTGPRRARL----- 57

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNT 457
              L     Q+  R      H +   TR+    L+  ++     ++     L+S +    
Sbjct: 58  --ALAASHLQSGLRQALRDGHARADRTRLRPAPLAAMLRERRAHLAGLAGRLESLSPMAV 115

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           L+RGY  ++D     +T+  ++    R+++ F DG+A   
Sbjct: 116 LERGYVLVRDPAGVPVTRAADVRPGGRLVLIFADGEAAVR 155


>gi|256026618|ref|ZP_05440452.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
 gi|289764618|ref|ZP_06523996.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
 gi|289716173|gb|EFD80185.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
          Length = 66

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
             YSVSE +  +K  ++   +     + GEIS     + SGH YFS+KD+ S+I    +
Sbjct: 2  EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60

Query: 70 KGTLNK 75
             L +
Sbjct: 61 NYKLKR 66


>gi|167909839|ref|ZP_02496930.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           112]
          Length = 124

 Score = 85.6 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + +++ +  ++ +         +     R++  L  +++     V+     L
Sbjct: 4   RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 63

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 64  EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 118


>gi|167917865|ref|ZP_02504956.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           BCC215]
          Length = 129

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + +++ +  ++ +         +     R++  L  +++     V+     L
Sbjct: 9   RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 68

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 69  EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 123


>gi|167618143|ref|ZP_02386774.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           Bt4]
          Length = 114

 Score = 85.2 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 45/107 (42%), Gaps = 1/107 (0%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
           + A++ +  ++ +  +      +  L  R++  L  +++     V+     L+  + + T
Sbjct: 2   RFALVQLRWQRARPDVAPARQVLATLAQRLDATLRRRVERDTARVAACAARLEVLSPQRT 61

Query: 458 LKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           L+RGY   I       +     L  + R+ ++  +G A+  + +  P
Sbjct: 62  LERGYAALIDTQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 108


>gi|167823047|ref|ZP_02454518.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           9]
          Length = 125

 Score = 84.8 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 47/115 (40%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + +++ +  ++ +         +     R++  L  +++     V+     L
Sbjct: 5   RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 64

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +    +L  + R+ ++  +G A+    +  P
Sbjct: 65  EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSFADVQP 119


>gi|167737458|ref|ZP_02410232.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           14]
 gi|167844609|ref|ZP_02470117.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           B7210]
          Length = 121

 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + +++ +  ++ +         +     R++  L  +I+     V+     L
Sbjct: 1   RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRIERDTARVAACAARL 60

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 61  EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 115


>gi|167947994|ref|ZP_02535068.1| exodeoxyribonuclease VII, large subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 73

 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 26/70 (37%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++     ++   R L + +   TL+RG+  +   +   +     +    +I     
Sbjct: 1   MESRLEQAQGRLAQFARDLHNLSPLTTLERGFAIVSSEDGTILRDAAKVTVGDQIETRLA 60

Query: 491 DGQANAIVIN 500
            G+    V+ 
Sbjct: 61  RGRLRCRVLE 70


>gi|167718409|ref|ZP_02401645.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           DM98]
          Length = 115

 Score = 84.4 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 47/109 (43%), Gaps = 1/109 (0%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + + +++ +  ++ +         +     R++  L  +I+     V+     L+  + +
Sbjct: 1   RARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRIERDTARVAACAARLEVLSPQ 60

Query: 456 NTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 61  RTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 109


>gi|229025642|ref|ZP_04182048.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272]
 gi|228735640|gb|EEL86229.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272]
          Length = 88

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 8/80 (10%), Positives = 31/80 (38%)

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
           +  +++  +   ++    +     + L++ +    + RGY  + D     +   ++++  
Sbjct: 1   MQKQLQREMQTLLQMKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLG 60

Query: 483 TRILINFFDGQANAIVINKA 502
             + +   DG  +  V +  
Sbjct: 61  DAVSVQLQDGILDCSVSSIE 80


>gi|167814576|ref|ZP_02446256.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           91]
          Length = 117

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 46/110 (41%), Gaps = 1/110 (0%)

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
           +    +++ +  ++ +         +     R++  L  +++     V+     L+  + 
Sbjct: 2   RARVFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARLEVLSP 61

Query: 455 KNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           + TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 62  QRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 111


>gi|167905704|ref|ZP_02492909.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei
           NCTC 13177]
          Length = 123

 Score = 83.7 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
           +R    + + + +++ +  ++ +         +     R++  L  +++     V+    
Sbjct: 1   MRAAVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAA 60

Query: 448 ILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            L+  + + TL+RGY ++ D      +    +L  + R+ ++  +G A+  + +  P
Sbjct: 61  RLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 117


>gi|58578690|ref|YP_196902.1| hypothetical protein ERWE_CDS_00260 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58616752|ref|YP_195951.1| hypothetical protein ERGA_CDS_00250 [Ehrlichia ruminantium str.
          Gardel]
 gi|58416364|emb|CAI27477.1| Truncated exodeoxyribonuclease large subunit [Ehrlichia
          ruminantium str. Gardel]
 gi|58417316|emb|CAI26520.1| Truncated exodeoxyribonuclease large subunit [Ehrlichia
          ruminantium str. Welgevonden]
          Length = 68

 Score = 83.7 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
          ++VSE++   +++V    +H+ VRGEIS       SGH YF+LKD+ + ++A+ W  
Sbjct: 5  FTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVLNAVCWNN 60


>gi|221205878|ref|ZP_03578893.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2]
 gi|221174716|gb|EEE07148.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans
           CGD2]
          Length = 129

 Score = 83.3 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 46/115 (40%), Gaps = 1/115 (0%)

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + + + A+  +  ++ +    +    +  L  R+   L  + +     V+     L
Sbjct: 9   RPVRDARARFALAQLRWQRARPDPAHARHVLAGLSQRLAVALQRRHERDTARVAACAARL 68

Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           +  + + TL+RGY ++ D      +     L  + R+ ++  +G A+  + +  P
Sbjct: 69  EVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQP 123


>gi|58578689|ref|YP_196901.1| hypothetical protein ERWE_CDS_00250 [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58417315|emb|CAI26519.1| Hypothetical protein ERWE_CDS_00250 [Ehrlichia ruminantium str.
          Welgevonden]
          Length = 68

 Score = 82.9 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71
          E++VSE++   +++V    +H+ VRGEIS       SGH YF+LKD+ +  +A+ W  
Sbjct: 4  EFTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVFNAVCWNN 60


>gi|167561819|ref|ZP_02354735.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis
           EO147]
          Length = 108

 Score = 82.5 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 42/102 (41%), Gaps = 1/102 (0%)

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
            +  ++ +  +      +  L  R++  L  + +     V+     L+  + + TL+RGY
Sbjct: 1   QLRWQRARPDLTQARQMLATLAQRLDTALQRRHERDAARVTACAARLEVLSPRRTLERGY 60

Query: 463 TSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            ++ D      +     L  + R+ ++  +G A+  + +  P
Sbjct: 61  AALIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 102


>gi|329890593|ref|ZP_08268936.1| exodeoxyribonuclease large subunit [Brevundimonas diminuta ATCC
           11568]
 gi|328845894|gb|EGF95458.1| exodeoxyribonuclease large subunit [Brevundimonas diminuta ATCC
           11568]
          Length = 95

 Score = 81.0 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +++     ++  +R L +   K   K G+  I+D     I     L+    + I F 
Sbjct: 1   MPRRLERAEDRLTALSRALTTLNPKTP-KPGFARIEDAEGAMIASAAALSPGQAVRIVFN 59

Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           DG  +A +  +      P    +     +     QG+LF
Sbjct: 60  DGAKDATIDGEGA---TPRPTPKPAPRPKAPPAGQGDLF 95


>gi|289804318|ref|ZP_06534947.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 58

 Score = 80.2 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            L++ +   TL RGYT    T+   + + + +     +     DG   + V +  P
Sbjct: 1   HLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 56


>gi|260577033|ref|ZP_05845013.1| exodeoxyribonuclease VII, large subunit [Rhodobacter sp. SW2]
 gi|259020789|gb|EEW24105.1| exodeoxyribonuclease VII, large subunit [Rhodobacter sp. SW2]
          Length = 195

 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 62/208 (29%), Gaps = 17/208 (8%)

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE---- 381
            R D     L   L   + R+      +   ++   L   + +  + + +  + +E    
Sbjct: 1   QRFDLWAGRLSPALAAAVARQRARLQPLAAHLRVRVLADMLARRGERLADLGRGLEAGQA 60

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           + +++               L  L      ++      +  L  R++     ++      
Sbjct: 61  RRLERAGDRALALSARLAPALARLLADAGRQVQRGRADLAALDARLQAAQKQRLARLSDR 120

Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501
           +    R   +  Y  TL+RGY  ++  +   +T K        + + F DG+        
Sbjct: 121 LEALERTRATLGYAETLRRGYVVVRG-DGAVVTSKALAERAAALELEFHDGRM------- 172

Query: 502 APPKEQPTKKCQLHNNKREKQGTQGELF 529
                    +        E    QG LF
Sbjct: 173 -----ALGLRAAKPRKAGEPGPDQGSLF 195


>gi|330950775|gb|EGH51035.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae Cit 7]
          Length = 82

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +  +IK+    +    + L   +   TL RGY+ + D   + I       T  R+     
Sbjct: 1   MREQIKARKLQLQSQVQTLNVVSPLATLGRGYSILLDERGHAIRSAAQTQTGQRLTARLG 60

Query: 491 DGQANAIVIN 500
           +G+    V +
Sbjct: 61  EGELQVRVED 70


>gi|315303028|ref|ZP_07873738.1| exodeoxyribonuclease 7 large subunit [Listeria ivanovii FSL F6-596]
 gi|313628595|gb|EFR97018.1| exodeoxyribonuclease 7 large subunit [Listeria ivanovii FSL F6-596]
          Length = 124

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 1/100 (1%)

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
            +     +  I      +    T ++  +  ++K    S       L+  +    LKRG+
Sbjct: 20  RLNYYHPEKEITLQKEQLILRRTALDKAIKQQLKDKQQSFVRQVEALEHLSPLALLKRGF 79

Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
                     +     L     I +    GQ +A++  K 
Sbjct: 80  GVTYKEK-KLVKSVVQLEVGDNIQVKMQGGQIDALITAKE 118


>gi|289524508|ref|ZP_06441362.1| exodeoxyribonuclease 7 large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289502253|gb|EFD23417.1| exodeoxyribonuclease 7 large subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 91

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%)

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478
            I +L   +   L+  I S    ++     L + +    L RG+ +    +   +     
Sbjct: 4   EIARLTQSLSMNLNKIISSLKERLTHAAASLDALSPLKCLSRGWITCLSKDGETVVSLSQ 63

Query: 479 LATKTRILINFFDGQANAIVINK 501
           +A    + +   DG+ANA + + 
Sbjct: 64  VAIGDEVSLCMIDGRANAEITSI 86


>gi|309800404|ref|ZP_07694568.1| exodeoxyribonuclease VII, large subunit [Streptococcus infantis
          SK1302]
 gi|308115978|gb|EFO53490.1| exodeoxyribonuclease VII, large subunit [Streptococcus infantis
          SK1302]
          Length = 73

 Score = 76.7 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              SV+ L+ +LK   + +  L  V + G++S +R   +  H YFSLKD+ + I A IW
Sbjct: 2  EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 59

Query: 70 KGTLNKIE 77
           G   K+ 
Sbjct: 60 SGIYQKLG 67


>gi|148985101|ref|ZP_01818340.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922546|gb|EDK73664.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae
           SP3-BS71]
          Length = 169

 Score = 76.7 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 52/171 (30%), Gaps = 3/171 (1%)

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +   +  ++ +K          +             Q + + Q  ++Q ++  +      
Sbjct: 1   MVTAVRNVLSKKQEALKKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQL 60

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
            + +   L  L      +I      + +L   +   ++    +        +  L     
Sbjct: 61  VQARTHQLVQL--SPVTKIQRYQDRLGQLDKLLGSQMALVYDAKVAEAKRLSEALLMLDT 118

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
              + RGY  ++    + +    +L  K ++ +   DGQ    V +    +
Sbjct: 119 SRIVARGYAIVKKEE-SVVDSVESLKKKDQVTLLMRDGQVELEVKDVKTKE 168


>gi|313608928|gb|EFR84683.1| exodeoxyribonuclease 7 large subunit [Listeria monocytogenes FSL
           F2-208]
          Length = 122

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 1/96 (1%)

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
                 I      +   +  ++  +   +K    S       L+  +  + LKRG+    
Sbjct: 22  YHPNKEIELQKEQMTLRLQALDKAMKQLLKDKQQSFFRQVDALEHLSPLSLLKRGFGVTY 81

Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
              N  +   + L     I +    G  +A++  K 
Sbjct: 82  -KENTLVKSVQELEAGDNIQVKMQGGHIDALITAKE 116


>gi|46204803|ref|ZP_00049456.2| COG1570: Exonuclease VII, large subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 96

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 11/96 (11%)

Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504
              +L + +YK  L RGY  ++D +   +  +   A   R+ + F DG   A        
Sbjct: 1   MAGLLGALSYKAVLARGYALVRDADGLPVRTREAAAGTARLQLQFADGAIFARPEEGPAE 60

Query: 505 -----------KEQPTKKCQLHNNKREKQGTQGELF 529
                      +    +         E    QG LF
Sbjct: 61  IPPPPRPKRAPRRPAPESAAKAEAVAEPAARQGSLF 96


>gi|325067879|ref|ZP_08126552.1| exodeoxyribonuclease VII [Actinomyces oris K20]
          Length = 75

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
           + + +  L RGYT ++      IT   ++     I      G+  A V+    P+  
Sbjct: 16  ALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAHGRLVAQVVGATKPRPA 72


>gi|89071021|ref|ZP_01158238.1| Exonuclease VII, large subunit [Oceanicola granulosus HTCC2516]
 gi|89043409|gb|EAR49626.1| Exonuclease VII, large subunit [Oceanicola granulosus HTCC2516]
          Length = 127

 Score = 74.8 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 10/126 (7%)

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +      + +L   +  +    + +    ++   R+ ++  Y+ TL+RGY  ++  + + 
Sbjct: 3   MRERRRKLDELSLSLTRLGQADLVARKDRLAALDRLRETLGYRATLRRGYAVVRG-DGDV 61

Query: 473 ITQKRNLATKTRILINFFDGQA---------NAIVINKAPPKEQPTKKCQLHNNKREKQG 523
           +T          + I F DG+                  P    P    +    ++E   
Sbjct: 62  VTSAAAARAARALEIEFADGRMVPGGGGGGAGGGAAGAVPGGAAPGASGRARTRRKEAPP 121

Query: 524 TQGELF 529
            QG+LF
Sbjct: 122 EQGDLF 127


>gi|255030964|ref|ZP_05302915.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes
           LO28]
          Length = 179

 Score = 74.4 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 41/158 (25%), Gaps = 3/158 (1%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                   RL      L       + RK R    +   +  +   H +++  +      +
Sbjct: 25  PDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQHLILNGPKHQLEQQMERTDYFSE 84

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            +     + +             LH         I      +   +  ++  +   +K  
Sbjct: 85  RLNNAFSKQIFVKQTAFDRLNDRLHY--YHPNKEIELQKEQMTLHLQALDKAMKQLLKDK 142

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476
             S       L+  +  + LKRG+       N  +   
Sbjct: 143 QQSFFRQVDALEHLSPLSLLKRGFGVTY-KENTLVKSV 179


>gi|322392010|ref|ZP_08065473.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC
           700780]
 gi|321145108|gb|EFX40506.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC
           700780]
          Length = 152

 Score = 73.3 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 3/153 (1%)

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
           +   +             Q + + Q  ++Q V   L     +  E++  L  L     N+
Sbjct: 2   LSQSVIFRQPERLYDSYLQRLDQLQLRLKQSVNTELVRQQQKVLEQVHRLEQL--SPINK 59

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           I      + +L   +   ++    +    V   +  L        + RGY  ++  +   
Sbjct: 60  IQRYQDRLLQLEKLLRSQMAVVYDAKVAEVKRLSEALMMLDTGRIVARGYAIVKKED-TV 118

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
           +   + L  K ++ +   DGQ    V +    +
Sbjct: 119 VDSVQILKKKDQLTLLMRDGQVKLEVKDVKAKE 151


>gi|255024115|ref|ZP_05296101.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL
           J1-208]
          Length = 92

 Score = 72.9 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 1/87 (1%)

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
               +   +  ++  +   +K    S       L+  +  + LKRG+       N  +  
Sbjct: 1   QKEQMTLRLQALDKAMKQLLKDKQQSFFRQVDALEHLSPLSLLKRGFGVTY-KENTLVKS 59

Query: 476 KRNLATKTRILINFFDGQANAIVINKA 502
            + L     I +    G  +A++  K 
Sbjct: 60  VQELEVGDNIQVKMQGGHIDALITAKE 86


>gi|255524171|ref|ZP_05391131.1| exodeoxyribonuclease VII large subunit [Clostridium carboxidivorans
           P7]
 gi|255512156|gb|EET88436.1| exodeoxyribonuclease VII large subunit [Clostridium carboxidivorans
           P7]
          Length = 135

 Score = 72.5 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 5/126 (3%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFYLHTHIKKLITRI 427
           + + Q  I          I    KEK   L +L+         + I   + +I +L   +
Sbjct: 1   MEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLKRNLDVNSPYSYIVNEYNNIDRLKELM 60

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487
              +  +++     +     +L +    N L +GY  I++     +   +NL    ++ I
Sbjct: 61  NIKIKTRLEKEREKLIKANSLLTAHNPMNILNKGYAVIENEKIGVVNTIQNLKKLDKVKI 120

Query: 488 NFFDGQ 493
              DG 
Sbjct: 121 TLKDGS 126


>gi|297380181|gb|ADI35068.1| Exodeoxyribonuclease 7 large subunit [Helicobacter pylori v225d]
          Length = 120

 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 3/99 (3%)

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
           R   ++  F ++ +       +  A+ QL       T    D I++ARGGGS+EDL+ FN
Sbjct: 24  RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSMEDLYSFN 80

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
           DE I  A+  +    +SAIGHE+D+ L+D  ADLRA TP
Sbjct: 81  DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119



 Score = 64.0 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135
            +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+K  L  +  F  
Sbjct: 6   LKEGQEVVVSGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63


>gi|76800287|ref|ZP_00782001.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
 gi|76584514|gb|EAO61405.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae
           18RS21]
          Length = 154

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 3/140 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIK 421
              ++     L+K  ++ Q +   +R      ++K  +LH   +    K RI      + 
Sbjct: 11  RQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHIYQERVV 70

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
           +    +   ++ +  S           L S      + RGY  I+  N+  ++    +  
Sbjct: 71  QSRRLLSSTMTSQYDSKLARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINE 129

Query: 482 KTRILINFFDGQANAIVINK 501
              + +   DG     V + 
Sbjct: 130 GDHLQVKMQDGLLEVEVKDV 149


>gi|188527802|ref|YP_001910489.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470]
 gi|188144042|gb|ACD48459.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470]
          Length = 120

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%)

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
           R   ++  F ++ +       +  A+ QL       T    D I++ARGGGSIEDL+ FN
Sbjct: 24  RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSIEDLYPFN 80

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
           DE I  A+  +    +SAIGHE+D+ L+D  ADLRA TP
Sbjct: 81  DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135
            +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+K  L  +  F  
Sbjct: 6   LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63


>gi|289677933|ref|ZP_06498823.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv.
           syringae FF5]
          Length = 70

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
               + L   +   TL RGY+ + D   + I       T  R+     +G+ +  V +
Sbjct: 1   QSQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQTGQRLTARLGEGELHVRVED 58


>gi|308063808|gb|ADO05695.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Sat464]
          Length = 120

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%)

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
           R   ++  F ++ +       +  A+ QL       T    D I++ARGGGSIEDL+ FN
Sbjct: 24  RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSIEDLYSFN 80

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
           DE I  A+  +    +SAIGHE+D+ L+D  ADLRA TP
Sbjct: 81  DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135
            +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+K  L  +  F  
Sbjct: 6   LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63


>gi|325522434|gb|EGD01014.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. TJI49]
          Length = 80

 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINF 489
           +  + +     V+     L+  + + TL+RGY ++ D      +     L  + R+ ++ 
Sbjct: 1   MQRRHERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRTPNALKPQRRLTVHL 60

Query: 490 FDGQANAIVINKAP 503
            +G A+  + +  P
Sbjct: 61  AEGSADVSLADVQP 74


>gi|308062297|gb|ADO04185.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Cuz20]
          Length = 129

 Score = 70.2 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)

Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228
           R   ++  F ++ +       +  A+ QL       T    D I++ARGGGS++DL+ FN
Sbjct: 33  RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSMKDLYSFN 89

Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
           DE I  A+  +    +SAIGHE+D+ L+D  ADLRA TP
Sbjct: 90  DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 128



 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135
            +EG E +V G I+ +     YQI    + P   G+L  ALE+ K+K  L  +  F  
Sbjct: 15  LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 72


>gi|328479793|gb|EGF48909.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus
           MTCC 5462]
          Length = 140

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 2/114 (1%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                 +  Q + + +Q ++Q +  + +    E +  +A   +   Q   ++  L     
Sbjct: 1   PDRLYDQYVQRVDQLRQRLQQSI--NNQLRENEHRLAMATAQLDGRQLLVKVANLQRQQV 58

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
               R++  +   + + H +V+     L   +    L RG+  + D     +  
Sbjct: 59  DDRRRLDRAMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKN 112


>gi|210631301|ref|ZP_03296844.1| hypothetical protein COLSTE_00729 [Collinsella stercoris DSM 13279]
 gi|210160068|gb|EEA91039.1| hypothetical protein COLSTE_00729 [Collinsella stercoris DSM 13279]
          Length = 56

 Score = 67.5 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 17/52 (32%)

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507
             L RGY+   D +    T   + A    + +   DG   A V   +     
Sbjct: 1   KVLARGYSIAYDGDGRVATSAGSFAPGDGLRVRMADGDVRARVDEVSLAPRP 52


>gi|238809724|dbj|BAH69514.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 101

 Score = 67.5 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%)

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           +  +    +   TR +    H   +   + SI    +        L++G+  + + NN  
Sbjct: 10  LQKIQAKFEMAKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQI 69

Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPP 504
           I   + +    ++ I   DG A  +V      
Sbjct: 70  IKTIKQVKVDKKLYIELKDGIAEVVVQKVNKK 101


>gi|194246841|ref|YP_002004482.1| similar to exonuclease VII, large subunit (weak similar to
           botulinum neurotoxin subunit) [Candidatus Phytoplasma
           mali]
 gi|193807200|emb|CAP18642.1| similar to exonuclease VII, large subunit (weak similar to
           botulinum neurotoxin subunit) [Candidatus Phytoplasma
           mali]
          Length = 417

 Score = 64.8 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 7/131 (5%)

Query: 147 IIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTC 206
            I ++T+  G  I DI   ++     +  IF V  QG     +I++ + ++N        
Sbjct: 117 KIGILTNEKGDAISDIEAELNKENYKKYEIFSVFTQGYNAIVDISDKVKEIN------DK 170

Query: 207 PRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
            + +II+L+RGGG+  D+   FN+  I++ I  S IPI++AIGH  D T +D  A   A 
Sbjct: 171 NQCNIILLSRGGGNESDIDAVFNNLDIIKTIQQSKIPIVTAIGHANDVTFSDLVAFDNAT 230

Query: 266 TPTGAAEMAVP 276
           TPT   ++ + 
Sbjct: 231 TPTSGIQIVLK 241


>gi|167590712|ref|ZP_02383100.1| exodeoxyribonuclease VII large subunit [Burkholderia ubonensis Bu]
          Length = 67

 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKA 502
                L+  + + TL+RGY ++ D      +     L  + R+ ++  +G A+  + +  
Sbjct: 1   ACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQ 60

Query: 503 P 503
           P
Sbjct: 61  P 61


>gi|319949372|ref|ZP_08023441.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4]
 gi|319436955|gb|EFV92006.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4]
          Length = 415

 Score = 61.3 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 31/292 (10%)

Query: 75  KIEFLPEEGIEFLVIGKITTFPGSSKY------QIIIESLIPSG--SGTLLTALEKRKKK 126
            ++     G     IG++      S        ++ I+ +   G     L          
Sbjct: 39  SLDKCLINGRVVTAIGRLGV--NRSSVVELRVQKLFIDDMRAVGSVQAALNALPVSLDAL 96

Query: 127 LLEEGLFSD---QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-----RVIIFP 178
            +          + +  +P     I V+   +     D  + +           ++    
Sbjct: 97  GIAADRLDPKGREARLTVPQPMSHITVVAGGSSQGRADFERALRRTVGKAATQPQLQHIS 156

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             +QG +    I + +  L+           D + + RGGG+  DLW F+   +  A+  
Sbjct: 157 CSMQGPDVASRIIDVLDGLD-------PATTDAVCIVRGGGAWFDLWPFHSLALAHAVRG 209

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            + P+ +AIGH +D    D AAD  A TP+                      R   +   
Sbjct: 210 FAAPVYTAIGHSSDRFAIDCAADGAADTPSALGVALGLAAGAAVPGSEVASQRSVPLQTG 269

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                 + + +      +  + L   R    R   +L    E +  +K+   
Sbjct: 270 ------SRVANTPLRSGSFRRELEEERQARLRAESDLVRAQEELQRQKHFSH 315


>gi|256026616|ref|ZP_05440450.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11]
          Length = 77

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490
           +   +             +      NTLKRGYT  Q  N   I    ++     ++    
Sbjct: 1   MESFLAQKRNIFETKIDKISVLNPINTLKRGYTVSQVKNKR-IDVLDDIEINDEMVTILK 59

Query: 491 DGQANAIVINK 501
           DG+  +IV  K
Sbjct: 60  DGKVISIVKEK 70


>gi|239503439|ref|ZP_04662749.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii
           AB900]
          Length = 375

 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 85/233 (36%), Gaps = 27/233 (11%)

Query: 81  EEGIEFLVIGKITT--FPGSSKYQII---IESLIPSGSGTLLTAL----EKRKKKLLEEG 131
           + G    + G  T   F      ++    I+++    +     +     +  KK   +  
Sbjct: 82  KNGSYVEIHGVPTFNFFREQCTKRLKGYTIQAIEDDSAIQAFQSKLSTLDDLKKHRPKSH 141

Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDECPKEI 190
            F +Q    +      +   ++    + +D    ++  R        PV +   +   ++
Sbjct: 142 TFPNQFDLSVA-----VIYSSASKVDIQKDFYNYLNEYRDEFNFDEKPVSLSNVDALSQV 196

Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250
                         +C   D++++ RGGGS +    FNDE ++ A +N +   I  +GH 
Sbjct: 197 I------------SSCVDHDVVVVIRGGGSSDAFDIFNDEKVLNAFSNLNGYRIVGLGHN 244

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +D TL DY AD  A TP+ A        + L S    LE +   I       K
Sbjct: 245 SDVTLLDYLADHSAITPSDAGIHLKGQFDELFSRNDILEQQKIKIFKLESDLK 297


>gi|144897552|emb|CAM74416.1| hypothetical protein MGR_0986 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 79

 Score = 57.1 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 8/85 (9%)

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
                + S   ++ L RG+  I+D     +    +        I F DG  + +V   AP
Sbjct: 2   HLAAAVDSRDPQDVLDRGFAVIRDDAGKLV-SAADAQAGAAWSIEFKDGTTDVVVGANAP 60

Query: 504 PKEQPTKKCQLHNNKREKQGTQGEL 528
           P     KK +           QG L
Sbjct: 61  PAPPRPKKGK-------DDVRQGSL 78


>gi|58038980|ref|YP_190944.1| exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H]
 gi|58001394|gb|AAW60288.1| Exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H]
          Length = 344

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 33/246 (13%)

Query: 70  KGTLNKIEFLPEEGIEFLVIG--KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127
           K  L + E  P  G    V G  +   + G    +  + ++     G       ++K + 
Sbjct: 87  KSILARAEVGP--GDHVHVTGMLRARQYRGQVVLRFEVVAVELHDPG-------RQKVER 137

Query: 128 LEEGLFSDQHKNPIPFIPK------IIAVITSPTGAVI--RDILQRISCRF-PLRVIIFP 178
           +E  +       P  F P        + +I S   + +   D LQ +   + P RV   P
Sbjct: 138 VERSVLDVLRGLPCAFHPYPTRPDARLLLIHSAASSALVAEDFLQALGGAWRPERVRSLP 197

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238
             +                  L E     R DII+L RGGG + D   F + +++ A+A 
Sbjct: 198 TAMNDPG-------------RLAEAIRTCREDIIVLIRGGGDVSDFVVFENPLVLEALAV 244

Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
                +  +GH  + TLA+   D  A TP  A      +   +        A+   +   
Sbjct: 245 CPAHRVLGLGHTANRTLAERVVDHAATTPADAGHYIRRMSGRVWQEQEEARAQQEEMAAL 304

Query: 299 LIKYKI 304
                 
Sbjct: 305 RDSVTQ 310


>gi|257053992|ref|YP_003131825.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorhabdus
           utahensis DSM 12940]
 gi|256692755|gb|ACV13092.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorhabdus
           utahensis DSM 12940]
          Length = 730

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 18/167 (10%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
            P   + + + P   V +L   +          V + GEI       +SG   F L+D  
Sbjct: 211 EPAEAERTPEPPSVDVGDLEGWIGDT-------VRITGEIVD--ARQTSGPTVFELRDGT 261

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             +D   +     +     EEG    + G++       + Q+  E L           LE
Sbjct: 262 GSVDCAAFVEAGVRAYPSVEEGAVVEIDGEVR--ERRGELQVETEELELFDEDKREAVLE 319

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168
           +      E  L      + I   P +     +     IRD++  I  
Sbjct: 320 EI-----EATLSERARPDEID--PLVADEAVAAESESIRDVVGEIRR 359


>gi|171323163|ref|ZP_02911763.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria
           MEX-5]
 gi|171091441|gb|EDT37104.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria
           MEX-5]
          Length = 60

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 452 FAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
            + + TL+RGY ++ D      +     L  + R+ ++  +G A+  + +  P
Sbjct: 2   LSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQP 54


>gi|297487911|ref|XP_002696577.1| PREDICTED: A kinase (PRKA) anchor protein 13 [Bos taurus]
 gi|296475623|gb|DAA17738.1| A kinase (PRKA) anchor protein 13 [Bos taurus]
          Length = 2637

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/213 (8%), Positives = 63/213 (29%), Gaps = 17/213 (7%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2307 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNANLVFMHKRNSEQVIQSVVHLHEL 2366

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R         + +       +++K RQ +   Q+  
Sbjct: 2367 LSTLQGVVLQQDSYIEDQKLLLSERALTRTASRPSSLIEQEKQRSLEKQRQDLANLQRQQ 2426

Query: 381  EQIVKQHLRYIFLE---------KKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q  ++  R+             ++ ++A       ++   +      +++         
Sbjct: 2427 AQHQEEKRRHEREWESRERALQEREARLAQREDELRRSCQDLEREREELQQRKGAYQGDL 2486

Query: 425  TRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
             R+      +++     +   +  L   +Y+NT
Sbjct: 2487 ERL-RAAQRQLEREQEQLRRDSERLSQVSYQNT 2518


>gi|312136892|ref|YP_004004229.1| tRNA(ile2) 2-agmatinylcytidine synthetase [Methanothermus fervidus
           DSM 2088]
 gi|311224611|gb|ADP77467.1| tRNA(Ile2) 2-agmatinylcytidine synthetase [Methanothermus fervidus
           DSM 2088]
          Length = 416

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 31  NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFLV 88
                 V GE+     +   GH +F+LKD+   I    ++ T    KI    + G +  +
Sbjct: 261 QFESYVVIGEVKDEPKVIEGGHVFFTLKDSSGEITCAAYEPTKEFRKIVMKLKPGDKLKI 320

Query: 89  IGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            G I          + IE +       L   L     K  +
Sbjct: 321 YGGIGVHN-----TLNIEKMKILELAPLYKKLNPLCPKCGK 356


>gi|15679576|ref|NP_276693.1| hypothetical protein MTH1581 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622704|gb|AAB86054.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 137

 Score = 51.7 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 25  KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFL----- 79
           + +++     V V G ++  R    SG  +  + D    I A+I++ T   I+       
Sbjct: 44  RGMIDR---KVTVEGTVADVRESEHSGIIFLKINDGTGTITAVIFESTAETIKRNGPAPI 100

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
             +G+   V G++  +      ++ +E   PSG 
Sbjct: 101 LLKGMRVQVTGRVKEY--RGLLEVAVE--EPSGL 130


>gi|167533542|ref|XP_001748450.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772969|gb|EDQ86614.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1600

 Score = 51.3 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/259 (9%), Positives = 67/259 (25%), Gaps = 20/259 (7%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
                A               I+ + +    ++  +      L S           +   
Sbjct: 531 DARPVAQRRVSNNLHAQLVKQISDQIKAQESLLLRLTTTNRELESQRVLYERRLALVEDE 590

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
           + ++      L   L  I  +K  H + I    +        +  R    + +Q   ++ 
Sbjct: 591 KQKIAADRDRLRSALAEISGQKTSHADQIRREYQRQLAELQSRAQRIEKDKLEQQ--RLE 648

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSV 442
           +   R        + +I    R++ K  I      +++   +        ++++  +   
Sbjct: 649 QSRNRAAAQIDSLRTSIQTAKRQR-KEMIEQAQQEMRRNREQAREHEREINRLRRENAKT 707

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
                 L+              + + +   I   R L    R+     D Q  +      
Sbjct: 708 KTEASRLERL------------VTNKD---IAHARALEENKRLKARLRDNQPASRTKQSQ 752

Query: 503 PPKEQPTKKCQLHNNKREK 521
               +  K+       ++ 
Sbjct: 753 SSPWRNVKRNATKQVTKDP 771


>gi|169838357|ref|ZP_02871545.1| hypothetical protein cdivTM_14876 [candidate division TM7
           single-cell isolate TM7a]
          Length = 102

 Score = 50.9 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
             +  ++      I     H+        + + + I      ++   +I +S   +N L 
Sbjct: 5   QSILRVKPTLHQIISDNKAHLHSRKLTARYHILNYIDLQKAKIAALGKIAKSLDPRNVLA 64

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500
           RGY  ++  N+        L+   ++ I   D    A VI+
Sbjct: 65  RGYVIMRMENDI-------LSNGAQVDIETKDYFIKAKVID 98


>gi|149912523|ref|ZP_01901057.1| lipopolysaccharide biosynthesis [Roseobacter sp. AzwK-3b]
 gi|149812929|gb|EDM72755.1| lipopolysaccharide biosynthesis [Roseobacter sp. AzwK-3b]
          Length = 519

 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 18/271 (6%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E + ++   A+                        ++  + R  N +   + ++ N   S
Sbjct: 152 EENVSMRKAASGQTLEFFVQEVARLDQELADQGQRILEFKLRNQNALPESVDFRRNRQAS 211

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
           L + +   ++ LS  R R DRL    E    I +  +             D L   +   
Sbjct: 212 LQERILQIERDLSSLRDRRDRLTEMYERTGSITMSEEEMTPEERRLIQLQDDLTTALTVY 271

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            +     Q          L+      + K+A       Q    +      I  +  ++EF
Sbjct: 272 SEQNPRIQN---------LQRRVEVLENKVAEQRAAEGQGSEDLSPYEIQIADIEGQMEF 322

Query: 430 ILSHKIKSCHTSVSITTRILQSFAY-----KNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
           ++  +  +    ++     L++          TL+R Y +++   N          T  +
Sbjct: 323 LIEQR-TTIEEDLTELNASLEAT-PANAITLGTLERDYENLRIQYNQATADLSTARTGDQ 380

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLH 515
           I      GQ    VI +A    +PT   +  
Sbjct: 381 IEAQ-SRGQRI-TVIEQAVAPREPTAPDRRK 409


>gi|227885435|ref|ZP_04003240.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|227837592|gb|EEJ48058.1| conserved hypothetical protein [Escherichia coli 83972]
          Length = 79

 Score = 50.5 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 3  PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61
          P    ++     + VS +S      VE       V G+I       S SG  Y +L+D++
Sbjct: 9  PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 65

Query: 62 SRID 65
            I 
Sbjct: 66 EDIS 69


>gi|317484212|ref|ZP_07943141.1| hypothetical protein HMPREF0179_00492 [Bilophila wadsworthia 3_1_6]
 gi|316924561|gb|EFV45718.1| hypothetical protein HMPREF0179_00492 [Bilophila wadsworthia 3_1_6]
          Length = 317

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 63/325 (19%), Positives = 111/325 (34%), Gaps = 43/325 (13%)

Query: 13  PEYSVSELSY--------HLKHIVESNLSHVCVRGEISGYRGIHS--SGHAY-FSLKDNH 61
           P  SV+ LS          LK+ V+ +      +G I  +    +  +G  Y   L D  
Sbjct: 2   PSLSVARLSSVFEDMAGAALKNAVDDSSCVFRTQGIIGDWTAKRTFWNGVHYSIELADGG 61

Query: 62  SRIDAI-IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK--YQIIIES---LIPSGSGT 115
             I  + +    +      P  G    V+G    +   S   +++ + +   +  S  G 
Sbjct: 62  KSI-CVDLPLEVIQNGGIRP--GDRVDVLGIPVVYLKKSVVLFKLHVHAASVIEASAGGR 118

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVIT-----SPTGAVIRDILQRISCRF 170
               ++  +  +        +        PK    I+     S    V  D    +  + 
Sbjct: 119 GPEPVKNVEGTISHLK----ELGFKRIPFPKRATAISVIHSKSHAANVFADFKNELDLK- 173

Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            + V   P  +     P  IA AI Q +           ++++L RGGG   +   F  +
Sbjct: 174 SVNVESLPTAMTD---PSAIARAIDQAS----------GNVVVLIRGGGDDAEFTTFQHD 220

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
            +V+A+A  +   I+ +GH  + T AD  AD    TPT A            +       
Sbjct: 221 DVVKALARKAAHRITGLGHYGNLTYADIIADFCTTTPTSAGAYVREQLIRTYNMRQTERE 280

Query: 291 RLNNIIIRLIKYKINTLNSLLKALP 315
            L      +   +I+ L  +L AL 
Sbjct: 281 ALEEQAALIKALRISKLKWMLIALA 305


>gi|218459345|ref|ZP_03499436.1| exodeoxyribonuclease VII large subunit [Rhizobium etli Kim 5]
          Length = 47

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           L+  T I I F DG+  A+          P    +  + K  +   QG LF
Sbjct: 1   LSAGTGIAIEFADGRVGAMTTEGGA----PPAGAKKRSAKLAEPPKQGSLF 47


>gi|124024834|ref|YP_001013950.1| SMC ATPase superfamily chromosome segregation protein
            [Prochlorococcus marinus str. NATL1A]
 gi|123959902|gb|ABM74685.1| putative chromosome segregation protein, SMC ATPase superfamily
            [Prochlorococcus marinus str. NATL1A]
          Length = 1201

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 78/234 (33%), Gaps = 17/234 (7%)

Query: 267  PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
               +A +A   +  L ++           +      +    + +   +      L   ++
Sbjct: 883  TLASAHIAWREQSKLLTTNRQDLINQQKDLETRFGEQRRERDCVEADVAKKRFNLQEMQW 942

Query: 327  RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIV 384
             L RL  E + N++  I  +      +  ++ +   + + +     + +    +E  Q  
Sbjct: 943  SLQRLR-EDQKNMKEEIRMETIRCTELERKLPNPMPLISDEIRDNGLDDLLSKLEDLQKR 1001

Query: 385  KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-------- 436
             + L  + +   E++A L     + +NR+  L     +L+ RIE + + + +        
Sbjct: 1002 MEELEPVNMLALEELAKLEERLNELENRLQVLTDERSELLLRIETVATLREEAFMEAFKA 1061

Query: 437  ---SCHTSVSITTR---ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +  +     LQ    +  L+ G T +       + +   ++   +
Sbjct: 1062 VDIHFREIFASLSEGDGHLQLENPEEPLEGGLTLVAHPKGKPVRRLAAMSGGEK 1115


>gi|72383256|ref|YP_292611.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A]
 gi|72003106|gb|AAZ58908.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A]
          Length = 1183

 Score = 49.4 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 78/234 (33%), Gaps = 17/234 (7%)

Query: 267  PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
               ++ +A   +  L ++           +      +    + +   +      L   ++
Sbjct: 865  TLASSHIAWREQSKLLNTNRQDLINQQKDLETRFGEQRRERDCVEADVAKKRLNLQEMQW 924

Query: 327  RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIV 384
             L RL  E + N++  I  +      +  ++ +   + + +     + +    +E  Q  
Sbjct: 925  SLQRL-MEDQKNMKEEIRMETIRCTELERKLPNPRPLISDEIRDNGLDDLLSKLEDLQKR 983

Query: 385  KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-------- 436
             + L  + +   E++A L     + +NR+  L     +L+ RIE + + + +        
Sbjct: 984  MEELEPVNMLALEELAKLEERLNELENRLQVLTDERSELLLRIETVATLREEAFMEAFKA 1043

Query: 437  ---SCHTSVSITTR---ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                     +  +     LQ    +  L+ G T +       + +   ++   +
Sbjct: 1044 VDVHFREIFASLSEGDGHLQLENPEEPLEGGLTLVAHPKGKPVRRLAAMSGGEK 1097


>gi|116048621|ref|YP_792579.1| hypothetical protein PA14_55080 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583842|gb|ABJ09857.1| hypothetical protein PA14_55080 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 401

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 2/135 (1%)

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           PV                 L+ L +    P   ++++ARGGG   ++   +   +  A+ 
Sbjct: 214 PVFSHCRRVETNFMEPEQFLSDLAKVCQDPAIQVLVIARGGGDSLEVIG-DSREVACALL 272

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
               P  +A+GH+ +  L D  AD    TP+   +  +       +    L+  L     
Sbjct: 273 ACGRPFYTALGHDDNVMLLDKHADRSFSTPSILGQALME-TARDITQRQELQESLGKFAQ 331

Query: 298 RLIKYKINTLNSLLK 312
                K   L +  +
Sbjct: 332 ENASLKEQLLQANAR 346


>gi|84489086|ref|YP_447318.1| hypothetical protein Msp_0259 [Methanosphaera stadtmanae DSM 3091]
 gi|84372405|gb|ABC56675.1| hypothetical protein Msp_0259 [Methanosphaera stadtmanae DSM 3091]
          Length = 122

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70
           +  E SV+E+    K  +++    V V G I  Y     +G    +L D  + I  +I+ 
Sbjct: 29  NPEELSVNEID---KSKIDN---QVKVTGIIENYTIT-KTGTMIITLNDGSNVIKVVIFP 81

Query: 71  GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            T   +      G+   V  ++  +  + + ++IIE 
Sbjct: 82  ST--SLNTTLYNGMNITVTARVVEY--NGEMELIIEK 114


>gi|332653506|ref|ZP_08419251.1| DNA polymerase III, alpha subunit [Ruminococcaceae bacterium D16]
 gi|332518652|gb|EGJ48255.1| DNA polymerase III, alpha subunit [Ruminococcaceae bacterium D16]
          Length = 1155

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 34   HVCVRGEISGYRGIHSSG---HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90
             V V G I+ Y+   +      AY +L+D+ + ++ + +   L +      E    LV G
Sbjct: 997  RVTVAGVIATYKTRTTRNNTLMAYVNLEDDTASMELLCFSRVLGESGGYIRENSAVLVTG 1056

Query: 91   KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150
            +I+      + QI+++++ P   G +    ++ +  +          ++P     +++  
Sbjct: 1057 RISVRDEK-EPQIMVDTIAPLNQGEVQQQEKEPRLYIRM-----PSRQDPRMRKVELVLS 1110

Query: 151  ITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183
                 G  +         R+  R +I P  +Q 
Sbjct: 1111 FFPGEGQAVLYFEDT-KKRYGARCLIHPALIQD 1142


>gi|313106799|ref|ZP_07793013.1| putative exonuclease [Pseudomonas aeruginosa 39016]
 gi|310879515|gb|EFQ38109.1| putative exonuclease [Pseudomonas aeruginosa 39016]
          Length = 1211

 Score = 48.6 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
            +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRERQDNLDDSHLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040


>gi|167835697|ref|ZP_02462580.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis
           MSMB43]
          Length = 54

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 457 TLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503
           TL+RGY +I D      +     L  + R+ ++  +G A+  + +  P
Sbjct: 1   TLERGYAAIIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 48


>gi|156837241|ref|XP_001642651.1| hypothetical protein Kpol_378p4 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113205|gb|EDO14793.1| hypothetical protein Kpol_378p4 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 559

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/116 (9%), Positives = 43/116 (37%), Gaps = 1/116 (0%)

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
            +  R  + ++H +   + ++ R    I +++    L   I++ ++   +  + + + ++
Sbjct: 1   MKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLK-RIRQQKRIQHQMMRRLLKRIR 59

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           Q  R      ++ +  +   +      +  L   I++       ++   +K     
Sbjct: 60  QQKRIQHQMMRQLLKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQ 115



 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 23/177 (12%)

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                I       L+  I++ ++   +  + + + ++Q  R      +  +  +   +  
Sbjct: 5   RQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQKRI 64

Query: 409 TKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
               +  L   I++   RI+   +   +K       I  ++++       LKR       
Sbjct: 65  QHQMMRQLLKRIRQ-QKRIQHQMMRRLLKRIRQQKRIQHQMMR-----RLLKR-----IR 113

Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524
                  Q    AT+            ++ V   + P ++   +      +      
Sbjct: 114 QQKRIQHQTNETATEE-----------DSTVEEDSTPDDETATEEDSTAEEDSTPDD 159


>gi|260790923|ref|XP_002590490.1| hypothetical protein BRAFLDRAFT_124497 [Branchiostoma floridae]
 gi|229275684|gb|EEN46501.1| hypothetical protein BRAFLDRAFT_124497 [Branchiostoma floridae]
          Length = 1384

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 54/185 (29%), Gaps = 2/185 (1%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
                S + +             K +  + N          Q        + R  ++   
Sbjct: 328 PASCSSCMQHQRRHKAKKSKPKRKQRTTSGNGQQMERKQPLQKNIAPTQTILRALQKGLQ 387

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
            L+  +    +    +   +++        +     L+K     Q   Q L+      ++
Sbjct: 388 ALQKGLQALQKGLQALQKGLQALQKGLQALQKGLQALQKGLQAPQKGPQALQMRLQALQK 447

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY-KN 456
            +  L    +  +  +       + L  ++   L  ++++    +    + LQ+      
Sbjct: 448 GLQALQKGPQALQKGLQAPQKGPQALQMKL-QALQMRLQALQMRLQALQKGLQALQKGLQ 506

Query: 457 TLKRG 461
           TL++G
Sbjct: 507 TLQKG 511


>gi|15599478|ref|NP_252972.1| exonuclease [Pseudomonas aeruginosa PAO1]
 gi|17433243|sp|Q9HWB8|SBCC_PSEAE RecName: Full=Nuclease sbcCD subunit C
 gi|9950502|gb|AAG07670.1|AE004844_2 probable exonuclease [Pseudomonas aeruginosa PAO1]
          Length = 1211

 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 64/178 (35%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
            +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       +++     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLAASEQAYLETYSQLQADNQRREQSQALLAELER 1040


>gi|20089795|ref|NP_615870.1| hypothetical protein MA0917 [Methanosarcina acetivorans C2A]
 gi|19914737|gb|AAM04350.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 714

 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 11/114 (9%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           SE+   +K  +      + + GE+   +   +SG   F++ D    I    ++    +  
Sbjct: 206 SEIDTSMKGRL------IRIEGEVIQVKQ--TSGPTIFTISDEGGFIPCAAFESAGKRSY 257

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
              + G+   + G++T  P   + QI + S+     G    A++ R +K++EE 
Sbjct: 258 PHIDVGMIVSITGEVT--PRDEQVQIEVMSMKLLT-GEKEAAVKFRVEKVIEEK 308


>gi|261886026|ref|ZP_06010065.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 82

 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 38/75 (50%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           NDE + R I     PI+SA+GHE D+ ++D+ +D R+ TPT A    +P    +  SL  
Sbjct: 1   NDEHLARVIFTLETPIVSAVGHEIDYCISDFVSDHRSLTPTAAMVDLLPDANTILQSLDI 60

Query: 288 LEARLNNIIIRLIKY 302
              +  + I    + 
Sbjct: 61  AFDKFESFIDGKFQN 75


>gi|116052316|ref|YP_792627.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587537|gb|ABJ13552.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 1211

 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
            +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040


>gi|326429686|gb|EGD75256.1| hypothetical protein PTSG_06911 [Salpingoeca sp. ATCC 50818]
          Length = 2361

 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%)

Query: 286  INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
             ++  R  + + RL         +           L       ++  +E     E     
Sbjct: 1293 EDVRRRRQDALSRLDAELDERRQAADADFERKRSALCELEEATEQRLQEARAAAEHDASE 1352

Query: 346  KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
              +       R +        +  +    E +     + +   +     + ++ A L  +
Sbjct: 1353 TRKQAKEDAERTRQQARDRAAEDEKAMREEMEARRHAMEEDLRKLQQRLEDDRQAALADM 1412

Query: 406  REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465
             E  +         + +   R E  +   +             L+S +     KR     
Sbjct: 1413 EEALQQERAKHQKRLAEQRERDEAAMREDLARLRQRTEDEIAQLESSS-----KR--ALA 1465

Query: 466  QDTNNNFITQKRN 478
            Q            
Sbjct: 1466 QSEAGRVAVSVHE 1478


>gi|218893374|ref|YP_002442243.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
 gi|218773602|emb|CAW29416.1| probable exonuclease [Pseudomonas aeruginosa LESB58]
          Length = 1211

 Score = 47.4 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
            +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 1040


>gi|294498685|ref|YP_003562385.1| hypothetical protein BMQ_1922 [Bacillus megaterium QM B1551]
 gi|294348622|gb|ADE68951.1| hypothetical protein BMQ_1922 [Bacillus megaterium QM B1551]
          Length = 331

 Score = 47.4 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)

Query: 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205
             +AVI+S  G   +D    +     +   +F   +     P++I  AI +++       
Sbjct: 138 WRVAVISS-EGDGFKDAEAVLKSCEFIDYELFSCNLLE---PEDIVAAIKRVD------- 186

Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
            P   I+++ RGGG  + L  FND  IV AI N    +++ +GH  D T+AD  +   A 
Sbjct: 187 -PSYHILLIVRGGG--KGLGKFNDVRIVEAIQNHERYVVTGLGHTEDKTIADTVSCYCAN 243

Query: 266 TPTGAAEMAVPVKEHLQSSLIN 287
            P  AA          +    N
Sbjct: 244 VPADAARHIKNKCIQEREKKKN 265


>gi|254244905|ref|ZP_04938227.1| exonuclease [Pseudomonas aeruginosa 2192]
 gi|126198283|gb|EAZ62346.1| exonuclease [Pseudomonas aeruginosa 2192]
          Length = 782

 Score = 47.4 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
           +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 434 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 493

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
           +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 494 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 553

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
              R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 554 QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 611


>gi|55377803|ref|YP_135653.1| nuclease [Haloarcula marismortui ATCC 43049]
 gi|55230528|gb|AAV45947.1| putative nuclease [Haloarcula marismortui ATCC 43049]
          Length = 726

 Score = 47.1 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              + D P      ++  +  + +   + V + GE+ G     +SG   F L+D    +D
Sbjct: 220 SDETTDEP------VAAAIGDLDDHVGADVRLEGEVVGI--RQTSGPTVFELQDETGTVD 271

Query: 66  AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
              +     +     EE     + G +       + Q+  E L    +       ++   
Sbjct: 272 CAAFVEAGVRAYPEVEEDDYIRLSGDVR--ERRGELQVETEDLDVLEAEEREEVEQRLAD 329

Query: 126 KLLEEG 131
            L +E 
Sbjct: 330 ALDDEA 335


>gi|172039636|ref|YP_001806137.1| DNA polymerase III subunit alpha [Cyanothece sp. ATCC 51142]
 gi|171701090|gb|ACB54071.1| DNA polymerase III alpha subunit, C-terminal intein/extein
           [Cyanothece sp. ATCC 51142]
          Length = 452

 Score = 47.1 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+  Y        A+  L+D  +++DA+ +  +  +I  +  E    +V GK+       
Sbjct: 292 EVKQYTTKKGDQMAFLVLEDGSAQVDAVCFPESYKRIREVLIEDSRLIVWGKVDY--RDD 349

Query: 100 KYQIIIESLIPS 111
           K Q+I+E   P 
Sbjct: 350 KVQLIVEDAEPV 361


>gi|294669570|ref|ZP_06734637.1| hypothetical protein NEIELOOT_01471 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308483|gb|EFE49726.1| hypothetical protein NEIELOOT_01471 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 48

 Score = 47.1 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506
            ++++    I     L    ++ I FF+G+A+  V  +    +
Sbjct: 1   MVKNSRGQVIRDAALLKQGQKLHITFFEGEADVRVTGEQAQPD 43


>gi|332884094|gb|EGK04374.1| hypothetical protein HMPREF9456_01402 [Dysgonomonas mossii DSM
           22836]
          Length = 498

 Score = 47.1 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 117/362 (32%), Gaps = 30/362 (8%)

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKY-QII-----IESLIPSGSGTLLTALEKRKKKLLE 129
           ++     G   +V G +        Y Q+      I+ +           L + +   L+
Sbjct: 134 LKQKVTNGNLVMVAGIVLREIRKGGYVQLQLKATRIDIIQEQTISETEIKLAELRNIKLK 193

Query: 130 EGLFS-----DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184
           +G F       ++K      PKI  +    +      I  + +    +  I F V     
Sbjct: 194 KG-FHNVDTLLENKLYTEDRPKIALIFADTSITDKDFITGKAAASSHIDFIEFRVSF--- 249

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244
                  N       L +       D I + RGGG+  ++   ++  ++  I   + PII
Sbjct: 250 -------NKTSDFLQLLKNLDTQSFDAISIIRGGGTGLEVV--DNINLIETIVYMNTPII 300

Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           SAIGHE D       AD     P         + E + S      A L   + +  + ++
Sbjct: 301 SAIGHENDKIFIKNIADKVVAVPHALGTYFKDMVERVISEKSKSRAALVEQVKKQYEKQL 360

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                  K+L    + ++ S             NL+  +   +    + +   ++   I 
Sbjct: 361 VQQEEQNKSLQKQLKEITESHKLTSEKSNTQITNLQKQLKEIFE--TNTVKDKRNQEQIT 418

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
                 + + + Q  IEQ      R   L K+   + + +        I   +  I +L 
Sbjct: 419 AFTVQIKKLTDNQ--IEQDRTATKRTEELNKQLIASQIKID--NLLKSIEEKNKQINQLS 474

Query: 425 TR 426
           ++
Sbjct: 475 SK 476


>gi|292657002|ref|YP_003536899.1| putative nuclease [Haloferax volcanii DS2]
 gi|291370734|gb|ADE02961.1| putative nuclease [Haloferax volcanii DS2]
          Length = 729

 Score = 46.7 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 28  VESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86
           ++  +  V  V GEI+      + G   F L+D  +  D   +     +     E G   
Sbjct: 239 IDDRVGDVIRVEGEIASV--RQTGGPTVFELRDETAIADCAAFVEAGVRAYPEVEVGDYV 296

Query: 87  LVIGKITTFPGSSKYQIIIESL 108
            + G++       + QI  E L
Sbjct: 297 RIDGEVE--RRRGELQIETEEL 316


>gi|322368923|ref|ZP_08043490.1| hypothetical protein ZOD2009_05537 [Haladaptatus paucihalophilus
           DX253]
 gi|320551654|gb|EFW93301.1| hypothetical protein ZOD2009_05537 [Haladaptatus paucihalophilus
           DX253]
          Length = 698

 Score = 46.7 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 33  SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
             V + GEI       +SG   F L+D  + +D   +K    +     + G    + G++
Sbjct: 210 DRVRIEGEI--VSTSQTSGPTVFELRDETAVVDCAAFKEAGVRAYPEVDTGDIARLTGEV 267

Query: 93  TTFPGSSKYQIIIESLIPSG-------SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145
                +++ Q+  E L            G L  ALE   +    E L  D     I    
Sbjct: 268 EL--RNNELQVETEQLDALTEDEKATVEGRLAKALEDEARPADVEPLADDAAVEAIHEDI 325

Query: 146 K 146
           +
Sbjct: 326 R 326


>gi|107100133|ref|ZP_01364051.1| hypothetical protein PaerPA_01001154 [Pseudomonas aeruginosa PACS2]
          Length = 1211

 Score = 46.7 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342
            +          +++      S ++ L     +L   + RL      L+   +        
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRKRQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 1040


>gi|167589925|ref|ZP_02382313.1| hypothetical protein BuboB_31613 [Burkholderia ubonensis Bu]
          Length = 655

 Score = 46.7 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/282 (10%), Positives = 78/282 (27%), Gaps = 26/282 (9%)

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
             A   + I   +A   +   +L +   D  A   T  A           +SL  + A+L
Sbjct: 285 ALAQTATDIGTQTATFEQHSASLLNTMRDSHANLQTELASRDEQRLAAWNASLAAMAAKL 344

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI--------IIF 344
           ++   +      +   ++  AL  +   +       ++    L + +          +  
Sbjct: 345 SDEWAQTSANHTSRQQAICDALAQTATDIGTQTTTFEQHSASLLNTMRESHANLQTELAS 404

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH------IEQIVKQHLRYIFLEKKEK 398
           R  +        +         +  +       +       + +              + 
Sbjct: 405 RDEQRLAAWSASLAEMAAKLRDEWAQTSAQAASRQQDICDTLARTANDITAQAQAHASDT 464

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYK 455
           IA +  L +            + +L  R+   +      +      ++    +L +  + 
Sbjct: 465 IAEISRLVQAASEAPKAAAEVVAELRQRLSDSMVRDTAMLDERSRLLATLETLLDAVNHA 524

Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497
           +T +RG        +  +    +L    R+   F D   +A 
Sbjct: 525 STEQRG-AV-----DALVRTSADLL--DRVGARFND-TVDAE 557


>gi|295695077|ref|YP_003588315.1| protein of unknown function DUF16 [Bacillus tusciae DSM 2912]
 gi|295410679|gb|ADG05171.1| protein of unknown function DUF16 [Bacillus tusciae DSM 2912]
          Length = 263

 Score = 46.7 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 61/156 (39%), Gaps = 2/156 (1%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +   +      L ++ + L   +Q L     RL+ + + LE  +E  +    +    + 
Sbjct: 26  RLEARVDRIDQRLEAVEQRLEAVEQRLEAVEQRLEVVEQRLEV-VEQRLEAVEQRLEVVE 84

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
            R++       + + R  ++E++  + +   + +       ++++  +    E  + R+ 
Sbjct: 85  QRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEAVEQRLEVVEQRLE 144

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            +   ++ +  R+E  +  ++++    +    R L 
Sbjct: 145 AVEQRLEVVEQRLE-AVEQRLEAVEQRLDAVERRLD 179



 Score = 46.3 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 65/157 (41%), Gaps = 2/157 (1%)

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           I++ ++      + L   +   DQ L     RL+ + + LE  +E  +    +    +  
Sbjct: 13  ILQEVRSLHGRFDRLEARVDRIDQRLEAVEQRLEAVEQRLE-AVEQRLEVVEQRLEVVEQ 71

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+++      + + R  ++E++  + +   + +       ++++ ++    E  + R+  
Sbjct: 72  RLEAVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEA 131

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +   ++ +  R+E  +  +++     +    + L++ 
Sbjct: 132 VEQRLEVVEQRLE-AVEQRLEVVEQRLEAVEQRLEAV 167


>gi|296390979|ref|ZP_06880454.1| putative exonuclease [Pseudomonas aeruginosa PAb1]
          Length = 1211

 Score = 46.7 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 61/178 (34%), Gaps = 6/178 (3%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE------LEHNLEII 342
            +          +++      S ++ L     +L   + RL             +      
Sbjct: 863  QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQEEFQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +    + +    L   +  + +   + ++ ++++ ++  R   LE + +  +L
Sbjct: 923  LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               R++ +     L  ++++   R+       + +     +   R  QS A    L+R
Sbjct: 983  QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040


>gi|304315105|ref|YP_003850252.1| DNA-binding protein [Methanothermobacter marburgensis str. Marburg]
 gi|302588564|gb|ADL58939.1| predicted DNA-binding protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 429

 Score = 46.7 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 7/90 (7%)

Query: 30  SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFL 87
                  + GE+     +   GH +F+L D+  +I+   ++ T    K+      G    
Sbjct: 265 ETFGCYRISGEVLDSPRVIEGGHVFFTLGDDSGKIECGAYEPTKDFRKVILELIPGDRVT 324

Query: 88  VIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
           V G I          + IE +    +  L 
Sbjct: 325 VYGGI---GAQGT--LNIEKIHLERAAELY 349


>gi|116754783|ref|YP_843901.1| phosphoesterase domain-containing protein [Methanosaeta thermophila
           PT]
 gi|116666234|gb|ABK15261.1| phosphoesterase, RecJ domain protein [Methanosaeta thermophila PT]
          Length = 722

 Score = 46.3 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 28  VESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86
           ++ +L   VC++GE+   +     G   F++ D+   +    ++    +     +  +  
Sbjct: 211 LQKHLGKIVCIKGEVIQVKQTA--GPTIFTIADDSGTVSCAAFERAGVRAYPEIQGDMVV 268

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL-FSD 135
            VIG+ T    +++ QI I S+     G      E+ ++ +      F  
Sbjct: 269 KVIGEPTI--RNNQMQIEIRSMKQLFGGEATKVREEIEQAIDRRAEPFDP 316


>gi|220906791|ref|YP_002482102.1| DNA gyrase subunit A [Cyanothece sp. PCC 7425]
 gi|219863402|gb|ACL43741.1| DNA gyrase, A subunit [Cyanothece sp. PCC 7425]
          Length = 839

 Score = 46.3 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/260 (9%), Positives = 67/260 (25%), Gaps = 29/260 (11%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-FNHI 353
            +      +   +   LK        L     +           L ++  +  +     +
Sbjct: 303 DLRDESDREGMRIVIELKRETQPQPLLDQLYRQTQLQTNFGVIMLALVDGQPRQMGLKEL 362

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIE------QIVKQHLRYIFLEKKEKIAILHMLRE 407
           +    +       ++ R  + + Q  +         ++   R I L ++           
Sbjct: 363 LEHFLNFREHTLTRRYRHQLDQAQSRLHLVEGLLTALQNLDRVITLLREATDGSAAKQTL 422

Query: 408 QTKNRIFYLHTH--IKKLITRIEFILSHKIKSCHTSVSITTRILQSF------------- 452
           Q++  +        +   + R+  +    +++ H  +    + L++              
Sbjct: 423 QSELNLSDRQADAILSMPLRRLTGLEQQNLRTEHDQLVGQIQQLETLLGSRHELLKALKK 482

Query: 453 AYKNTLKRGYT---SIQDTNN-NFITQKRNLATKTRILINFF-DGQANAIVINKAPPKEQ 507
               +LKR Y      +       +     LA  T + +     G     +      +  
Sbjct: 483 D-LRSLKRQYADQRLTRIQTEAEPLPSVEELAADTEVTLELSQRGYVRC-LRGGERGRRN 540

Query: 508 PTKKCQLHNNKREKQGTQGE 527
             +      N  +    Q E
Sbjct: 541 QARSEGAKANNAKADPAQPE 560


>gi|21228136|ref|NP_634058.1| hypothetical protein MM_2034 [Methanosarcina mazei Go1]
 gi|20906581|gb|AAM31730.1| conserved protein [Methanosarcina mazei Go1]
          Length = 710

 Score = 46.3 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 88/249 (35%), Gaps = 35/249 (14%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           S++   +K  +      + + GE+   +   +SG   F++ D    I    ++    +  
Sbjct: 202 SQIDTSMKGRL------IRIEGEVIQVKQ--TSGPTIFTISDEGGFIPCAAFESAGKRSY 253

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137
              + G+   + G++T  P   + QI + S+     G     ++ R +K+++E       
Sbjct: 254 PHIDVGMIVSITGEVT--PRDEQVQIEVMSMKLLT-GEKEAVVKTRVEKVIDEKAAPADI 310

Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQL 197
              I      +  +      V ++I + I    P+        ++       I +AI   
Sbjct: 311 PFLIESEI--LEKLRPRMLHVAKEIKKAILHSTPI-------LLRHHADADGITSAIAIE 361

Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257
             +            ++   GGS  + + +      RA + +    ++ +  +  + L D
Sbjct: 362 RAILP----------LITEIGGSDAEYYFYK-----RAPSKAPFYELADVTRDISFALED 406

Query: 258 YAADLRAPT 266
           YA   +   
Sbjct: 407 YARHGQKMP 415


>gi|313673612|ref|YP_004051723.1| metal dependent phosphohydrolase [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312940368|gb|ADR19560.1| metal dependent phosphohydrolase [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 311

 Score = 45.9 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 57  LKDNHS-RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115
           L D    +I  I++     K++F P++G    V G I ++  + ++Q+ I ++       
Sbjct: 30  LIDKDGVQIQGIMFDSN--KLKFDPQKGDVVEVSGTIQSY--NGQFQVKINNMAKMPE-- 83

Query: 116 LLTALEKRKKKLLEEGLFSDQHKN 139
                E+ K  L +   F +    
Sbjct: 84  -----EESKDFLPKGN-FDENQLY 101


>gi|15645596|ref|NP_207772.1| exonuclease VII-like protein (xseA) [Helicobacter pylori 26695]
 gi|2314123|gb|AAD08027.1| exonuclease VII-like protein (xseA) [Helicobacter pylori 26695]
          Length = 121

 Score = 45.9 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 43/97 (44%)

Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
              +    +SAIGHE+D+ L+D  ADLRA TP+ A E+ +P  +     L     +L+  
Sbjct: 24  YYLARTFSMSAIGHESDFLLSDLVADLRASTPSNAMEILLPNSDEWLQKLDGFNVKLHRS 83

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
              L+  K   L  L   L   +  ++ S      L 
Sbjct: 84  FKILLHQKKAHLEHLADFLEKRNYPVNHSEPGSQALH 120


>gi|260833006|ref|XP_002611448.1| hypothetical protein BRAFLDRAFT_63920 [Branchiostoma floridae]
 gi|229296819|gb|EEN67458.1| hypothetical protein BRAFLDRAFT_63920 [Branchiostoma floridae]
          Length = 419

 Score = 45.9 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 59/150 (39%), Gaps = 12/150 (8%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +  P S +     R  L R   +  H  + +I  +    +H            N+ +++ 
Sbjct: 270 RTWPISGKFTEPQRQNLRRHQSDPLHQQQNLIRHQLDMLHH----------QQNLIRHQL 319

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EF 429
            +L +QQ++ +     L +     + ++ +LH  +   ++++  LH     +  ++  + 
Sbjct: 320 ELLHQQQNLIRHQLDLLHHQQNLIRHQLELLHHPQNLIRHQLDMLHHQQNLIRHQLELQN 379

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
           ++ H++   H   +     L    ++  LK
Sbjct: 380 LIRHQLDLLHHQQNPIRHQLDQLHHQQNLK 409


>gi|254779576|ref|YP_003057682.1| putative exonuclease VII, large subunit [Helicobacter pylori B38]
 gi|254001488|emb|CAX29493.1| Putative exonuclease VII, large subunit [Helicobacter pylori B38]
          Length = 84

 Score = 45.5 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 37/78 (47%)

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            +    +SAIGHE+D+ L+D  ADLRA TP+ A E+ +P  +     L     +L+    
Sbjct: 1   MAKTFSMSAIGHESDFLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFK 60

Query: 298 RLIKYKINTLNSLLKALP 315
            L+  K   L  L     
Sbjct: 61  TLLHQKKAHLEHLADFFR 78


>gi|119482906|ref|XP_001261481.1| septin AspB [Neosartorya fischeri NRRL 181]
 gi|119409636|gb|EAW19584.1| septin AspB [Neosartorya fischeri NRRL 181]
          Length = 526

 Score = 45.5 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E  +   
Sbjct: 254 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 313

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 314 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 371

Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                W +   D                    +    ++    E   ++ + ++   +  
Sbjct: 372 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 431

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 432 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 491

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 492 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 526


>gi|159123258|gb|EDP48378.1| septin AspB [Aspergillus fumigatus A1163]
          Length = 526

 Score = 45.5 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E  +   
Sbjct: 254 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 313

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 314 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 371

Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                W +   D                    +    ++    E   ++ + ++   +  
Sbjct: 372 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 431

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 432 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 491

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 492 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 526


>gi|70986973|ref|XP_748972.1| septin AspB [Aspergillus fumigatus Af293]
 gi|66846602|gb|EAL86934.1| septin AspB [Aspergillus fumigatus Af293]
          Length = 527

 Score = 45.5 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E  +   
Sbjct: 255 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 314

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 315 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 372

Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                W +   D                    +    ++    E   ++ + ++   +  
Sbjct: 373 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 432

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 433 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 492

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 493 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 527


>gi|318040497|ref|ZP_07972453.1| SMC ATPase superfamily chromosome segregation protein
           [Synechococcus sp. CB0101]
          Length = 354

 Score = 45.5 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 68/239 (28%), Gaps = 17/239 (7%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
           ++A     A   A   ++    +  +        +      +    +     L    QTL
Sbjct: 31  VQAVNALVAERAAWKEQQQADQAKRSELEERQQELQARFGERRRARDEAEAQLSRQRQTL 90

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
               + L RL  E    L             +   +               +   Q  ++
Sbjct: 91  QQQEWELQRLGEE-LTALAEQERSGALRLEQLQRELPDPLPEIPEDVRENGLEALQAELK 149

Query: 382 --QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
             Q   + L  + +   +++  L       + R+  L    ++L+ RIE + + + ++  
Sbjct: 150 SLQARMEALEPVNMLALQELEELEARLADLQERLDVLCKEREELLLRIETVATLRQEAFM 209

Query: 440 TSVSIT--------------TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            +                     LQ    ++ L  G + +       + +  +++   +
Sbjct: 210 EAFKAVDGHFREIFAGLSDGEGHLQLENPESPLDGGLSLVAHPKGKAVRRLASMSGGEK 268


>gi|224495963|ref|NP_001139073.1| STE20-like serine/threonine-protein kinase [Danio rerio]
 gi|220675923|emb|CAX14344.1| novel protein similar to vertebrate STE20-like kinase (yeast) (SLK)
            [Danio rerio]
          Length = 1201

 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 51/168 (30%), Gaps = 3/168 (1%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
              V+   +     +E    +   RL            K L      L   +       + 
Sbjct: 873  QEVENLEKQQKQTIERLEQDHTNRLRDEAKRIKAEQDKELSKFQNMLKNRKKEEQEFLQR 932

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
             +  L+  + +  +     I  I+ D L H  Q  R       +  E+ +++  + +  +
Sbjct: 933  QQQELDGALKKIIQQHKLEIATIERDCLNHKQQLMRAREAAMWELEERHLQEKHQLLKQQ 992

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             K++     M R Q   R       ++    R+   + ++       +
Sbjct: 993  LKDQ---YFMQRHQLLKRHDKEMEQMQGYNQRLIEEMKNRQAQERARL 1037


>gi|110667751|ref|YP_657562.1| RecJ-like exonuclease [Haloquadratum walsbyi DSM 16790]
 gi|109625498|emb|CAJ51925.1| RecJ-like exonuclease [Haloquadratum walsbyi DSM 16790]
          Length = 767

 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%)

Query: 2   NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61
           +    + + D    S+  LS  +        S V + GEI       + G   F L+D  
Sbjct: 253 SEALNELADDREPVSIDSLSDRVG-------SDVQIEGEIVE--ARQTGGPTVFELRDES 303

Query: 62  SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121
             ++   +     +      +G    + G++       + Q+    L P   G     +E
Sbjct: 304 GTVECAAFVEAGVRAYPDVGDGDIVRLNGEVE--RRRGEIQVETNELTPL-EGAAAETVE 360

Query: 122 -KRKKKLLEEG 131
            +    L  E 
Sbjct: 361 NRLVDALTAEA 371


>gi|14601265|ref|NP_147800.1| hypothetical protein APE_1221 [Aeropyrum pernix K1]
 gi|5104896|dbj|BAA80210.1| hypothetical protein [Aeropyrum pernix K1]
          Length = 356

 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 42/144 (29%), Gaps = 2/144 (1%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                L +     ++  S    R  +L    +   +     + RH        K D    
Sbjct: 55  ERFEKLEERQLRLEERFSQLEERQIKLEERFQLLEKRFQRLEERHLRLERRFQKLDERFQ 114

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            +++ +  + E+ Q +EQ  +       L  +++   L       + R   L      L 
Sbjct: 115 RLEQRQLRLEERFQRLEQRFQSLEERY-LRLEQRFQRLEERFRLLEERFQKLEQRQLHLE 173

Query: 425 TRIEFILSHKIKSCHTSVSITTRI 448
            R + +   ++K            
Sbjct: 174 ERFQRLEERQLK-LEQRFQKLEER 196



 Score = 44.4 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 8/154 (5%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RI 357
            ++ + + L      L    Q L     RL+         LE    +    F  +   ++
Sbjct: 66  RLEERFSQLEERQIKLEERFQLLEKRFQRLEERH----LRLERRFQKLDERFQRLEQRQL 121

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           + +     +++  Q + E+   +EQ  ++      L  +E+   L   +   + R   L 
Sbjct: 122 RLEERFQRLEQRFQSLEERYLRLEQRFQRLEERFRL-LEERFQKLEQRQLHLEERFQRLE 180

Query: 418 THIKKLITRIEFILSH--KIKSCHTSVSITTRIL 449
               KL  R + +     K++     +    R L
Sbjct: 181 ERQLKLEQRFQKLEERHLKLEQRFQRLEEEFRRL 214



 Score = 44.0 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 44/130 (33%), Gaps = 5/130 (3%)

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
             R              +I +  +++       R++   L   +++  Q + E+ Q +EQ
Sbjct: 61  EERQLRLEERFSQLEERQIKLEERFQLLEKRFQRLEERHL--RLERRFQKLDERFQRLEQ 118

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440
             +  L   F   +++   L     + + R   L    + L  R + +   +  ++    
Sbjct: 119 -RQLRLEERFQRLEQRFQSLEERYLRLEQRFQRLEERFRLLEERFQKLEQRQLHLEERFQ 177

Query: 441 SVSITTRILQ 450
            +      L+
Sbjct: 178 RLEERQLKLE 187


>gi|301103308|ref|XP_002900740.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101495|gb|EEY59547.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 594

 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 55/147 (37%), Gaps = 2/147 (1%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
              +Q L  +      L   L  +L +    +         ++ ++ L++  ++ R    
Sbjct: 54  KRKEQFLKKAEGDPISLLNALRTHLRLRFAEQEARQTATARQVHAEDLLNQQREQRTRDQ 113

Query: 375 EKQQHIE-QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            +Q  +  + +K+    +  +  ++       R Q +N +  ++  ++   +R E     
Sbjct: 114 LQQLELTCRQLKEQRDSLICQLNQREIDQTQTRRQHQNLLEKMNAQVQDGRSR-EQEAKL 172

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKR 460
            +      ++      ++ +++ TL+R
Sbjct: 173 LVAKQQQEIATLKEAREALSHQKTLER 199


>gi|291295132|ref|YP_003506530.1| RNA binding metal dependent phosphohydrolase [Meiothermus ruber DSM
           1279]
 gi|290470091|gb|ADD27510.1| RNA binding metal dependent phosphohydrolase [Meiothermus ruber DSM
           1279]
          Length = 591

 Score = 45.5 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/175 (6%), Positives = 51/175 (29%), Gaps = 7/175 (4%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                      + +    +    TL +  +    + +        L    R    +L   
Sbjct: 26  QRSNRQTEVSKSELEAARREAQQTLEAARRQAQTALEQAQNQAQALLEAARAEAQSLRQN 85

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK------QHLRYIFLEKK 396
              + ++     +           ++ RQ + E+++ ++  ++         R     ++
Sbjct: 86  AQTEIQNLRQNAHVELERLRQQGEERLRQQLREERERLQASLQAEREALMSERASIQAER 145

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           E++          +  +      + +   +++   + K+      +    + L++
Sbjct: 146 ERLQADLQASRAEREELKRETERLARRGEQLD-ARAAKLDEQEEKLDALEKTLEA 199


>gi|159902606|ref|YP_001549950.1| SMC ATPase superfamily chromosome segregation protein
            [Prochlorococcus marinus str. MIT 9211]
 gi|159887782|gb|ABX07996.1| putative chromosome segregation protein, SMC ATPase superfamily
            [Prochlorococcus marinus str. MIT 9211]
          Length = 1207

 Score = 45.5 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/229 (10%), Positives = 69/229 (30%), Gaps = 17/229 (7%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
             +    +            +    +      K    +     L N  Q L   +++ +RL
Sbjct: 894  HIKWREQNQALGVHRKELEKEKQNLETHFGQKRQERDKAEADLANQRQKLQDLQFKFERL 953

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFL-------IHNIQKNRQHILEKQQHIEQIV 384
              E+  ++   +   +   N +   +            I+ +   +  +   +  +E + 
Sbjct: 954  KEEIL-SVNEELRHSHIRLNELEANLPDPLPDIPEEVRINGLDFIQDQLKNLENRLEALE 1012

Query: 385  KQHLRYIFLE---------KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
              ++  +              EK+ +L   R +   R+  + T  ++        +    
Sbjct: 1013 PVNMLALEELEKLESRLFALAEKLEVLTEERSELLLRVETVATLRQEAFMEAFEAVDGYF 1072

Query: 436  KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
            +    S+S     LQ    ++ L+ G T +       + +   ++   +
Sbjct: 1073 REIFASLSEGDGHLQLDNPEDPLEGGLTLVAHPKGKSVRRLAAMSGGEK 1121


>gi|150399109|ref|YP_001322876.1| replication factor A [Methanococcus vannielii SB]
 gi|150011812|gb|ABR54264.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanococcus
           vannielii SB]
          Length = 641

 Score = 45.5 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 10/73 (13%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS--KYQIIIESLIPSG 112
            +LKD+   I   +W       +F  ++G    V G    +        ++  +++    
Sbjct: 212 LTLKDSTGSIRVTLW---NELADFEVKKGDYVEVKG----YAKQGYSGLELSADNITIIR 264

Query: 113 SGTLLTAL-EKRK 124
            G L  +L E  K
Sbjct: 265 EGQLEESLSENLK 277


>gi|195448509|ref|XP_002071689.1| GK10116 [Drosophila willistoni]
 gi|194167774|gb|EDW82675.1| GK10116 [Drosophila willistoni]
          Length = 1733

 Score = 45.5 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 9/168 (5%), Positives = 43/168 (25%), Gaps = 8/168 (4%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                +   +   +AR       ++  +      L +     +  +   R   +      
Sbjct: 546 EQNPMMMRQITEEQARQQMAQNPMMMQQRQMSEDLARQQAAQNPMMMQQRQMAEEQA--- 602

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
               ++           +   +    +   +Q+ +    + +QH+ Q      +    E+
Sbjct: 603 --RQQMSQNPMMMQQRQMAEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEE 660

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHT 440
           + +           + ++       +     +   +  ++  +     
Sbjct: 661 QARQQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDLARQQA 708



 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/168 (6%), Positives = 46/168 (27%), Gaps = 2/168 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           +MA       Q  +    AR       ++  +        +   + +  +   R   + L
Sbjct: 563 QMAQNPMMMQQRQMSEDLARQQAAQNPMMMQQRQMAEEQARQQMSQNPMMMQQRQMAEDL 622

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
            R+    +              + +         + + +    +  Q+   + ++ +   
Sbjct: 623 ARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQAR-QQAAQNPMMMQQRQMAED 681

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
              ++     + M + Q    +         ++ + +  ++ +     
Sbjct: 682 QARQQMAQNPMMMQQRQMAEDLARQQAAQNPMMMQ-QRQMAEEQARQQ 728



 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/138 (7%), Positives = 41/138 (29%), Gaps = 1/138 (0%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
           +   Q  +   +AR +     ++  +        +     +  +   R   +      + 
Sbjct: 629 QMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQARQQAAQNPMMMQQRQMAEDQA-RQQM 687

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
               ++ ++ +    +  +  +   +   Q+       +QQ  +  +    R +  +   
Sbjct: 688 AQNPMMMQQRQMAEDLARQQAAQNPMMMQQRQMAEEQARQQMAQNPMMMQQRQMAEDLAR 747

Query: 398 KIAILHMLREQTKNRIFY 415
           + A  + +  Q +     
Sbjct: 748 QQAEQNPMMMQQRQMAEE 765



 Score = 40.5 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 7/156 (4%), Positives = 49/156 (31%), Gaps = 2/156 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTL--NSLLKALPNSDQTLSCSRYRLDRLPR 333
                    +   +   +    ++ +            +     +  +   R   +   R
Sbjct: 604 QQMSQNPMMMQQRQMAEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQAR 663

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +      +++ ++    +    ++  + ++   ++  + +  +Q     ++ Q  +    
Sbjct: 664 QQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDLARQQAAQNPMMMQQRQMAEE 723

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           + ++++A   M+ +Q +          ++    ++ 
Sbjct: 724 QARQQMAQNPMMMQQRQMAEDLARQQAEQNPMMMQQ 759



 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 51/163 (31%), Gaps = 2/163 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            MA       Q  +   +AR       ++  +        +     +  +   R   + L
Sbjct: 644 HMAQNPMMMQQRQMAEEQARQQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDL 703

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
            R+      +++ ++         ++  + ++   ++  + +   +Q  EQ      +  
Sbjct: 704 ARQQAAQNPMMMQQRQMAEEQARQQMAQNPMMMQQRQMAEDLA--RQQAEQNPMMMQQRQ 761

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
             E++ KI  + M + Q            ++       ++  +
Sbjct: 762 MAEEQAKIQQIQMQQRQMAEEQARQQQQQQQAAQNPTMMMQQR 804


>gi|195472567|ref|XP_002088571.1| GE18639 [Drosophila yakuba]
 gi|194174672|gb|EDW88283.1| GE18639 [Drosophila yakuba]
          Length = 696

 Score = 45.1 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 69/215 (32%), Gaps = 14/215 (6%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
                +  + PV          L+ +   I       K+ TL  L +      + ++   
Sbjct: 213 NSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEKLLTLQRLQRLHQQKRRQMAEVC 272

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
             + RL        E+ +  +        +        H++ +    +L +QQ I  +  
Sbjct: 273 REIARLSVHCVTRNELRLKPRTTSL----SGDHYAHQYHSMGRALSVLLAEQQQIAPLTL 328

Query: 386 QHLRYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
            + + +         +  +L   RE  + R       ++++  +    L  ++ S    +
Sbjct: 329 YNAQQLTRRIEALSSQQRLLKAERETFRQRNERARQRLEEMREQ-REALQKQLHSQRHRL 387

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                 L++ A ++ L++     +D     + Q  
Sbjct: 388 EKERLELRTLAPQH-LEQ-----RDQRRQIVRQVE 416



 Score = 40.5 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/177 (8%), Positives = 51/177 (28%), Gaps = 28/177 (15%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                  ++  +   L   + ++  L       L   I         +    + +     
Sbjct: 301 HYAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKA--ERETFRQR 358

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
            ++ RQ + E ++  E + KQ        +KE++ +  +  +  + R       ++++  
Sbjct: 359 NERARQRLEEMREQREALQKQLHSQRHRLEKERLELRTLAPQHLEQR-DQRRQIVRQVER 417

Query: 426 RIEFILSHKIKSC-------------------------HTSVSITTRILQSFAYKNT 457
           R+  ++    +                            +  +   ++L + +    
Sbjct: 418 RMSTLVLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQLLDNVSPLAV 474


>gi|15678984|ref|NP_276101.1| hypothetical protein MTH966 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2622064|gb|AAB85462.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 444

 Score = 45.1 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 7/90 (7%)

Query: 30  SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFL 87
                  VRGE+     +   GH +F+L D+  +I+   ++ T    KI      G    
Sbjct: 265 ETFGCYRVRGEVIDGPRVIEGGHVFFTLGDDSGQIECGAYEPTKDFRKIILELIPGDVLT 324

Query: 88  VIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
           V G I          + IE +       L 
Sbjct: 325 VYGGI---GAQGT--MNIEKIHLERLAELY 349


>gi|67920557|ref|ZP_00514077.1| Protein splicing (intein) site [Crocosphaera watsonii WH 8501]
 gi|67858041|gb|EAM53280.1| Protein splicing (intein) site [Crocosphaera watsonii WH 8501]
          Length = 450

 Score = 45.1 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+  Y        A+  L+D  +++  + +  T  K+  +  E    +V GK+       
Sbjct: 292 EVKQYTTKKGDPMAFLVLEDGSAQVKGVCFPETYKKVREVLTEDSRLIVWGKVD--HRED 349

Query: 100 KYQIIIESLIPS 111
           K Q+I+    P 
Sbjct: 350 KIQLIVNDAEPV 361


>gi|261350689|ref|ZP_05976106.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
           2374]
 gi|288861472|gb|EFC93770.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
           2374]
          Length = 101

 Score = 45.1 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
           + +       +      + ++   ++  ++  + S    + I    L+       L++GY
Sbjct: 7   NHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLRILEEKLKILNPDELLEKGY 66

Query: 463 TSIQDTNNNFITQKRN 478
             ++D +   I + + 
Sbjct: 67  -VVKDPDE--IRKSKA 79


>gi|301633176|gb|ADK86730.1| conserved hypothetical protein [Mycoplasma pneumoniae FH]
          Length = 257

 Score = 45.1 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/204 (6%), Positives = 54/204 (26%), Gaps = 19/204 (9%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
             +        +                                   L  +   L    +
Sbjct: 62  CHVWEEELPDGSYDMGFNGNFNHMEKRKSGYVTQKQFSEFKDANNQRLIKIETTLAIQGE 121

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            ++     +++   ++   +++++ +  +             L    +  RQ    +   
Sbjct: 122 QINKLTQTVEKQGEQINQLVQVVLLQGEQIRE----------LQVEQKAQRQEFNARMDR 171

Query: 380 IEQIV---KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI------ 430
           +E ++    +     F   + ++  +    +  +NR+  +   +  +  R++ +      
Sbjct: 172 LENLLVESIESTNNRFDSMERRLDSMDSRLDSMENRLDSMEGRLDSMENRLDSMEGCLDF 231

Query: 431 LSHKIKSCHTSVSITTRILQSFAY 454
           +  ++ S  T +      L     
Sbjct: 232 VEGRLDSMETRLDSMETRLDKVDP 255


>gi|167523503|ref|XP_001746088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775359|gb|EDQ88983.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1357

 Score = 45.1 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 58/218 (26%), Gaps = 27/218 (12%)

Query: 279  EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
                ++  +          R+ +   + +  L +   + D  L   R   D L       
Sbjct: 1016 ASHATAKHSWLVWRQKFETRISQGLQDEVRELEQNATSVDARLQELRELRDTLAARRGEL 1075

Query: 339  LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
                        + +   +++   I  +Q   + +   +  + Q+     R     ++  
Sbjct: 1076 TRGR--------SSLQTALRTPEQIAAMQDQAERVASLRARLSQL-----REQVATRRAA 1122

Query: 399  IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
            +A       Q    +            R+E +           V      L++ +     
Sbjct: 1123 LAEQEEKVAQLDEDVQAKSAEAAAQRARLESLCKEGSAEELARVEGLRSQLETMS----- 1177

Query: 459  KRGYTSIQDTNNN---FITQKRNLATKTRILINFFDGQ 493
              G+  ++ +  +    +         TR+ +    G 
Sbjct: 1178 --GWAIVELSEEHRLEVLHTTS----GTRMTVQLQAGT 1209


>gi|9453839|dbj|BAB03273.1| myosin [Chara corallina]
          Length = 2182

 Score = 45.1 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/190 (9%), Positives = 66/190 (34%), Gaps = 9/190 (4%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328
             + A+      +    +L+      ++   + ++  L S  ++L +   +  L     R 
Sbjct: 1004 KKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLDNRILRQ 1063

Query: 329  DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
              L  +     +  + R  +H       ++++      Q  +    + Q++++ +     
Sbjct: 1064 QALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1123

Query: 389  RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI-------TRIEFILSHKIKSCHTS 441
                  +  K  +  +  +  +  + +L  + + L         ++E + S  ++     
Sbjct: 1124 ALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1183

Query: 442  VSITTRILQS 451
            +   ++ L++
Sbjct: 1184 LEANSQALRA 1193



 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/153 (8%), Positives = 51/153 (33%), Gaps = 2/153 (1%)

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
               + +L++L  +        +    +        +K        Q  ++++   + + +
Sbjct: 1487 QTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1546

Query: 382  QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
             +  ++       ++ +   L    +  + +   L    + L  ++E + S  ++     
Sbjct: 1547 ALRAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQH 1606

Query: 442  VSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
            +   ++ L++     TLK+    +       + 
Sbjct: 1607 LEANSQALRAEN--QTLKQQLEQLTSKGGTVVK 1637



 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 74/230 (32%), Gaps = 5/230 (2%)

Query: 227  FNDEMIVRAIANSSIPIIS-AIGHETDWTLADYAADL--RAPTPTGAAEMAVPVKEHLQS 283
            F  E     +    I +     GHE D   A  AA     A     A++  +   E L  
Sbjct: 931  FAMEGAQAQVEQMKILLAKEREGHEADLAQAKVAAAQLLEAEMSAQASKEVLDKVEALSE 990

Query: 284  SLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEI 341
                L+  + +   +    + +        L      + L+ S  ++  L  E +     
Sbjct: 991  ENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSE 1050

Query: 342  IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
             +  +  +       +    L    Q  ++++   + + + +  ++       ++ +   
Sbjct: 1051 KLNLQLDNRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD 1110

Query: 402  LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            L    +  +     L    + L  ++E + S  ++     +   ++ L++
Sbjct: 1111 LQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRA 1160


>gi|6472600|dbj|BAA87057.1| unconventional myosin heavy chain [Chara corallina]
          Length = 2167

 Score = 45.1 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/190 (9%), Positives = 66/190 (34%), Gaps = 9/190 (4%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328
             + A+      +    +L+      ++   + ++  L S  ++L +   +  L     R 
Sbjct: 1004 KKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLDNRILRQ 1063

Query: 329  DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
              L  +     +  + R  +H       ++++      Q  +    + Q++++ +     
Sbjct: 1064 QALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1123

Query: 389  RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI-------TRIEFILSHKIKSCHTS 441
                  +  K  +  +  +  +  + +L  + + L         ++E + S  ++     
Sbjct: 1124 ALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1183

Query: 442  VSITTRILQS 451
            +   ++ L++
Sbjct: 1184 LEANSQALRA 1193



 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/153 (8%), Positives = 51/153 (33%), Gaps = 2/153 (1%)

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
               + +L++L  +        +    +        +K        Q  ++++   + + +
Sbjct: 1487 QTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1546

Query: 382  QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
             +  ++       ++ +   L    +  + +   L    + L  ++E + S  ++     
Sbjct: 1547 ALRAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQH 1606

Query: 442  VSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
            +   ++ L++     TLK+    +       + 
Sbjct: 1607 LEANSQALRAEN--QTLKQQLEQLTSKGGTVVK 1637



 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 74/230 (32%), Gaps = 5/230 (2%)

Query: 227  FNDEMIVRAIANSSIPIIS-AIGHETDWTLADYAADL--RAPTPTGAAEMAVPVKEHLQS 283
            F  E     +    I +     GHE D   A  AA     A     A++  +   E L  
Sbjct: 931  FAMEGAQAQVEQMKILLAKEREGHEADLAQAKVAAAQLLEAEMSAQASKEVLDKVEALSE 990

Query: 284  SLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEI 341
                L+  + +   +    + +        L      + L+ S  ++  L  E +     
Sbjct: 991  ENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSE 1050

Query: 342  IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
             +  +  +       +    L    Q  ++++   + + + +  ++       ++ +   
Sbjct: 1051 KLNLQLDNRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD 1110

Query: 402  LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            L    +  +     L    + L  ++E + S  ++     +   ++ L++
Sbjct: 1111 LQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRA 1160


>gi|255692855|ref|ZP_05416530.1| exonuclease VII, large subunit domain protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621421|gb|EEX44292.1| exonuclease VII, large subunit domain protein [Bacteroides
           finegoldii DSM 17565]
          Length = 488

 Score = 44.7 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 61/415 (14%), Positives = 128/415 (30%), Gaps = 53/415 (12%)

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK------YQIIIESLIP 110
           L+D  ++ +  +      K+    ++G    V G         +        +++  +  
Sbjct: 63  LRDEDTQTEITL--QISQKLCSELKDGNLVTVGG---VLGKRVQNNSHIQLMLVVSRVEI 117

Query: 111 SGSGTLLTALEKRKKKLLEEGL------FS--DQHKNPIPFIPKIIAVITSPTGAVIRDI 162
                ++   E+++ +   + +           + K  I   P++  V  + +       
Sbjct: 118 VQE-QVVDEEEQKRIEFRRKKVQIGYKNIDGVLEQKLFIDERPRVALVFAATS------- 169

Query: 163 LQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222
                  F   +      +   E     AN       LKE     + D+I L RGGG   
Sbjct: 170 --ITMSDFNAGINAAKSAIDFYEQRVNFANTKELTALLKELDQQ-KYDVIALVRGGGG-- 224

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282
            +   ++  ++  I     PII+AIGH  +        D  APTP G  +    + E + 
Sbjct: 225 GIESLDELDVLDMIVEMQTPIIAAIGHVEEKLFIKQIVDKEAPTPNGLGQYFSDLVETVS 284

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                  A L   I +  + ++       K L      L+ ++    RL +E        
Sbjct: 285 EKKNKSRAVLTEQIKKQFQEQLIAAQRQNKELQEKLVFLTKAQEAAQRLHKEQVEVAHRQ 344

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
                +    I                     E  Q + +   +       E ++K+A +
Sbjct: 345 NQELQKKLVGIS-----------------KANEAAQKLHKEQVEVAHKQNQELQKKLAGI 387

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
               E  +         I K        L   ++  + +++ + + L +   + T
Sbjct: 388 SKANEDIQ---KAHVEQINKQSKEFNASLK-MMQEINDNLNKSLQKLTAQNTQAT 438


>gi|126659690|ref|ZP_01730819.1| DNA polymerase III subunit alpha [Cyanothece sp. CCY0110]
 gi|126619035|gb|EAZ89775.1| DNA polymerase III subunit alpha [Cyanothece sp. CCY0110]
          Length = 452

 Score = 44.7 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+  Y        A+  L+D  ++++ + +  T  +I  +  E    +V GK+       
Sbjct: 292 EVKQYTTKKGDQMAFLVLEDGSAQVEGVCFPETYKRIREVLIEDSRLIVWGKVDY--RDD 349

Query: 100 KYQIIIESLIPS 111
           K Q+I+E   P 
Sbjct: 350 KVQLIVEDAEPV 361


>gi|315924481|ref|ZP_07920702.1| DNA polymerase III PolC [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622185|gb|EFV02145.1| DNA polymerase III PolC [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 1442

 Score = 44.7 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 55  FSLKDNHSRIDAIIWKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
           F++ D  + I   I+ G     I+   + GI   V G+++    + + Q++   + 
Sbjct: 271 FNITDERASISCKIFVGKNASAIKERLKNGIWVQVEGQVSFDEYAHEKQLMPRVIE 326


>gi|257454406|ref|ZP_05619668.1| SMC domain protein [Enhydrobacter aerosaccus SK60]
 gi|257448172|gb|EEV23153.1| SMC domain protein [Enhydrobacter aerosaccus SK60]
          Length = 1215

 Score = 44.7 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/159 (7%), Positives = 40/159 (25%), Gaps = 5/159 (3%)

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
                  +    + L N    L     ++  +    +   E  I     H      +++ 
Sbjct: 656 QTSAQQLILCNQQLLINLSHLLQAEGQQV--ISFSQQLMNEARIEELDEHLAQQQPQLQR 713

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                   +      + Q    +     L     + +++        +   +++      
Sbjct: 714 LANRLQQARVSLQEWQAQDRTARNQLLSLTQQQQQCQQQKLQQQYRYQSALDKLTQDKKR 773

Query: 420 IKKLITRIEFI---LSHKIKSCHTSVSITTRILQSFAYK 455
           +     R++      + K++     V   +  L     +
Sbjct: 774 LDSDSERLQQEGLGFADKLQQEQQRVYELSNTLSHLQPQ 812



 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 45/176 (25%), Gaps = 7/176 (3%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
              ++    + +    +      +    +     S L  L    + L     RL +    
Sbjct: 728 WQAQDRTARNQLLSLTQQQQQCQQQKLQQQYRYQSALDKLTQDKKRLDSDSERLQQEGLG 787

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLI-HNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
               L+    R Y     + N +             RQ + E+        ++  +    
Sbjct: 788 FADKLQQEQQRVY----ELSNTLSHLQPQLQQQISERQSLDERLNQFASQQRELEQQQNR 843

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             +        +    +     L    +      + +LSHKI      +    + L
Sbjct: 844 ITQTLATGQLQITASEQQLAKALQDQARFTSE--QQLLSHKISEHKARLPQLQQQL 897


>gi|256079311|ref|XP_002575932.1| myosin heavy chain IIb [Schistosoma mansoni]
 gi|238661186|emb|CAZ32167.1| Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
            chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
            heavy chain, type B) (Nonmuscle myosin heavy chain-B)
            (NMMHC-B), putative [Schistosoma mansoni]
          Length = 1955

 Score = 44.7 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 16/264 (6%)

Query: 228  NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
            +   I  +     + +++ +  + D  L +     +A      A  A   +     +   
Sbjct: 758  DVYCIGHSKIFFKVGVLAQLEEDRDIHLTNSIIKFQAYARGYLARRAKEQRIQNIQASKI 817

Query: 288  LEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            ++   +  +             +   L     +  ++     L ++  ++E  +  +   
Sbjct: 818  IQRNCDAYLKLRNWPWWRLFTKVRPLLTVTRQEDLVAVKEEELRKIREQMEKVVNELNEM 877

Query: 346  KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
            +  +      +I+ +  +     + Q++  ++  + + ++          + + +     
Sbjct: 878  QRSYEKLSNEKIQLNAELQQEHDSNQNLQTERDRLREKLQTLEEDYME-LENRDSEEKSK 936

Query: 406  REQTKNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
                +     L   I  L  ++E       K++   TS+      L           GY 
Sbjct: 937  LHNLEAEQKRLLEQISDLSDQLELEEQQRQKLQVEKTSIEQKVSQLND---------GYV 987

Query: 464  SIQDTNNNFITQKRNLATKTRILI 487
            SI+D  N  +  K+ L    RI +
Sbjct: 988  SIEDKYNKLVKDKKQLT--DRIDL 1009


>gi|256079309|ref|XP_002575931.1| myosin heavy chain type B [Schistosoma mansoni]
 gi|238661185|emb|CAZ32166.1| Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
            chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
            heavy chain, type B) (Nonmuscle myosin heavy chain-B)
            (NMMHC-B), putative [Schistosoma mansoni]
          Length = 1961

 Score = 44.7 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 16/264 (6%)

Query: 228  NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
            +   I  +     + +++ +  + D  L +     +A      A  A   +     +   
Sbjct: 764  DVYCIGHSKIFFKVGVLAQLEEDRDIHLTNSIIKFQAYARGYLARRAKEQRIQNIQASKI 823

Query: 288  LEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            ++   +  +             +   L     +  ++     L ++  ++E  +  +   
Sbjct: 824  IQRNCDAYLKLRNWPWWRLFTKVRPLLTVTRQEDLVAVKEEELRKIREQMEKVVNELNEM 883

Query: 346  KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
            +  +      +I+ +  +     + Q++  ++  + + ++          + + +     
Sbjct: 884  QRSYEKLSNEKIQLNAELQQEHDSNQNLQTERDRLREKLQTLEEDYME-LENRDSEEKSK 942

Query: 406  REQTKNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
                +     L   I  L  ++E       K++   TS+      L           GY 
Sbjct: 943  LHNLEAEQKRLLEQISDLSDQLELEEQQRQKLQVEKTSIEQKVSQLND---------GYV 993

Query: 464  SIQDTNNNFITQKRNLATKTRILI 487
            SI+D  N  +  K+ L    RI +
Sbjct: 994  SIEDKYNKLVKDKKQLT--DRIDL 1015


>gi|118350336|ref|XP_001008449.1| hypothetical protein TTHERM_00019670 [Tetrahymena thermophila]
 gi|89290216|gb|EAR88204.1| hypothetical protein TTHERM_00019670 [Tetrahymena thermophila
           SB210]
          Length = 1164

 Score = 44.7 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/169 (8%), Positives = 52/169 (30%), Gaps = 6/169 (3%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
            + L++     E  +  +  +L       +                      +L  + E 
Sbjct: 754 FDELRTQTKEYEQSITELTQQLEDANQKLILEKQLHETKILTLNQQQEVEKMQLKSDYEQ 813

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
               +I +  +    +   I+   L   + +  Q + ++ +  +Q++         +K +
Sbjct: 814 QKSELIQQHNQTAQRLQKEIE--SLNQQMTQMAQELKQQHEQEKQVLIDQHNRAIQDKNQ 871

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFILSHKIKSCHTSV 442
           +I +L    ++   ++      ++         +   +  KI   +  +
Sbjct: 872 EIQVLEQRIQELLVQLEKQKAQLQMQFEEEKRILNQEMQQKIDELNQRL 920


>gi|319935864|ref|ZP_08010290.1| hypothetical protein HMPREF9488_01121 [Coprobacillus sp. 29_1]
 gi|319809131|gb|EFW05612.1| hypothetical protein HMPREF9488_01121 [Coprobacillus sp. 29_1]
          Length = 1018

 Score = 44.7 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 1    MNPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
            M+P    K  L+ P  +VS L  ++   V   +    V+               +    D
Sbjct: 913  MHPIELMKEKLNTPYINVSSLYEYVNQTVNIVVQLQRVK----NITDRKGDEMCFIEGFD 968

Query: 60   NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
                +D +++      I  + ++G   L+ GK+       K   I++   
Sbjct: 969  ETGSVDGVVFASRYKSIGMMLKKGNICLMNGKVDM---KDKLSFIVDKAR 1015


>gi|297567937|ref|YP_003686907.1| Exonuclease VII, large subunit [Meiothermus silvanus DSM 9946]
 gi|296852386|gb|ADH65399.1| Exonuclease VII, large subunit [Meiothermus silvanus DSM 9946]
          Length = 305

 Score = 44.7 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 12/130 (9%)

Query: 147 IIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTC 206
            + +I +  G V  D+ + +  R            Q +E    I      L +  E    
Sbjct: 139 RLLLIYAYEGIVDHDVEKALGDR--------RAAYQIEE--HRIRFTPEALASHLEQADL 188

Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPT 266
                I + RGGGS   L  F+   +V A+     P I+AIGH  D TL   AAD R  T
Sbjct: 189 RGYAAIGIVRGGGS--GLEVFDHPQLVEAVLGMRTPFIAAIGHAKDQTLVAAAADWRVET 246

Query: 267 PTGAAEMAVP 276
           P+        
Sbjct: 247 PSLLGTRLGE 256


>gi|322787446|gb|EFZ13534.1| hypothetical protein SINV_05789 [Solenopsis invicta]
          Length = 1574

 Score = 44.7 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/210 (10%), Positives = 60/210 (28%), Gaps = 8/210 (3%)

Query: 248  GHETD-WTLAD-YAADLRAPTPTGA----AEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
            GHE    T+AD   AD +      A           +     ++ +  A       +  +
Sbjct: 875  GHEGLGKTMADRLLADRQHYDNNRAFREQEMRIQEHRMAAMQAVEHRLAVAAAAQHQRDR 934

Query: 302  YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
             +   L  L +   +        +    RL  +   + +  + ++         +     
Sbjct: 935  DRERDLVHLREKEEHRLHREKELQQLEHRLAVQHHQHRDKDLQQQEHRLAQQREK-DMHV 993

Query: 362  LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH-I 420
                +   +Q   +  QH  ++     R   + ++   A       + +  +       I
Sbjct: 994  EHARLCSVQQVREKDMQHDHRLSVHQQREKEIHQQMVAAAQREKEHEHRLAVQQQREKEI 1053

Query: 421  KKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            ++   R+     H+ +     +++      
Sbjct: 1054 QQQEQRLAIQQQHEKEHAERRLAMQQAHRD 1083


>gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
 gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
          Length = 7662

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/176 (10%), Positives = 54/176 (30%), Gaps = 1/176 (0%)

Query: 286  INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIF 344
               +  L++    L   + N    + K     +  L   R R   +L R+ E  ++  + 
Sbjct: 6998 EEFQKMLDDHEKELESMQQNQEIEIAKHRDQLNSKLEERRRRKQQQLARKQEIEMQKKLL 7057

Query: 345  RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
            ++    + +    ++      + +  + +       E    ++L Y  ++++     L  
Sbjct: 7058 QQQAEADRLNAEREAKKEDAALAETIKELKNSDNENESKRAENLIYHVMQQRHAKETLQH 7117

Query: 405  LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
              +  K     L      + T+ +      ++     ++         +      R
Sbjct: 7118 EEQLKKELATALAEAQNNVATKCQDNRDKLVEQHEHQLAELLAHSDGISPLELKSR 7173


>gi|87311203|ref|ZP_01093326.1| CMP-binding protein [Blastopirellula marina DSM 3645]
 gi|87286111|gb|EAQ78022.1| CMP-binding protein [Blastopirellula marina DSM 3645]
          Length = 324

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 41  ISGYRGIH-SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPG 97
           +S  +      G+ Y  ++  D   +++ ++W    + +    ++G    + G    +  
Sbjct: 21  VSNKQLRPNRQGNLYLQMQIGDKSGQVNGMMW-NANDHVYRKFDDGDYVRIQGTSQFY-- 77

Query: 98  SSKYQIIIESLI 109
           +   QII+  + 
Sbjct: 78  NGAMQIIVSGIE 89


>gi|332822639|ref|XP_518098.3| PREDICTED: serine/threonine-protein kinase 10 [Pan troglodytes]
          Length = 1350

 Score = 44.4 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267  PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
             T         +         L       +  + ++++   + L+K            R+
Sbjct: 1096 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 1153

Query: 327  RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
             L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 1154 ELLRKHEKEREQMQRYNQRMTEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 1213

Query: 382  QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
               +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 1214 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 1273

Query: 442  VSITTRILQSFA 453
            V   T+ L++  
Sbjct: 1274 VEHETQKLKALD 1285



 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/135 (8%), Positives = 44/135 (32%), Gaps = 1/135 (0%)

Query: 309  SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               +   +  Q +     +   L R+     +  +    +       R   D     + K
Sbjct: 1054 PRQQRKESMKQKMEEHTQKKQLLDRDFVAKQKEDLELAMKRLTTDNRREICDKERECLMK 1113

Query: 369  NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRI 427
             ++ + +++  + ++ +  L+      K+++     + R +   +       +++   R+
Sbjct: 1114 KQELLRDREAALWEMEEHQLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRM 1173

Query: 428  EFILSHKIKSCHTSV 442
               L  + +     +
Sbjct: 1174 TEQLKVRQQQEKARL 1188


>gi|229824039|ref|ZP_04450108.1| hypothetical protein GCWU000282_01343 [Catonella morbi ATCC 51271]
 gi|229786393|gb|EEP22507.1| hypothetical protein GCWU000282_01343 [Catonella morbi ATCC 51271]
          Length = 1116

 Score = 44.4 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 35   VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
            V V+G I           A+  L+D  + I  +++  +      L +EG   LV G +  
Sbjct: 953  VLVKG-IRVINTKKQELMAFLELEDEVASISGVVFPQSYRHYVSLLKEGQVLLVEGTVEL 1011

Query: 95   FPGSSKYQIIIESLIPSGS 113
                 ++Q+II+ L P   
Sbjct: 1012 -DRQGRHQLIIKRLSPVNE 1029


>gi|218506153|ref|ZP_03504031.1| exodeoxyribonuclease VII large subunit [Rhizobium etli Brasil 5]
          Length = 43

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 4/45 (8%)

Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
           I I F DG+  A+               +    K  +   QG LF
Sbjct: 3   IAIEFADGRVGAMTTEGGSAP----ASAKKRGAKPAEPTKQGSLF 43


>gi|332158053|ref|YP_004423332.1| hypothetical protein PNA2_0411 [Pyrococcus sp. NA2]
 gi|331033516|gb|AEC51328.1| hypothetical protein PNA2_0411 [Pyrococcus sp. NA2]
          Length = 460

 Score = 44.4 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75
             +K I      +V VRG+++  +      H +F L+D   +I          ++  + K
Sbjct: 295 KKVKDI--RLYDNVIVRGKVAS-KYWEKGRHVFFELEDETGKIRVAAFEPTKKFRNYVRK 351

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +      G E +V G +          I +E L P     L+  +E RK K  +
Sbjct: 352 LIP----GDEVIVAGGVK--EHEGVLTINLEKLYPV---KLVPKVEYRKPKCPK 396


>gi|114588411|ref|XP_001153727.1| PREDICTED: pleckstrin homology-like domain, family B, member 2
           isoform 5 [Pan troglodytes]
          Length = 1277

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 674 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 733

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 734 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 791

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 792 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 850

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 851 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 902

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 903 KEHFRSLEERKKQ 915


>gi|189537765|ref|XP_001920876.1| PREDICTED: ankyrin repeat domain-containing protein 26 [Danio rerio]
          Length = 2319

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/163 (7%), Positives = 40/163 (24%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            +     +  R    +      L   L +  + L        +  +      E        
Sbjct: 2022 QQLKEKLKSRSRSQEQTERRQLEDELLSLRRQLEAGVMDQSQAEQYRRDTEERARQEIRH 2081

Query: 349  HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                +   +++        +  +   E  Q      +       L +   +     ++  
Sbjct: 2082 KLEEVNLFLQTQAASQEALEQMKAANESSQRAHLEQRIRDLEAELSRSRSVQQDSQIQRD 2141

Query: 409  TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            +       +  +     R+   L+ K+   +  ++     L S
Sbjct: 2142 SSQSELQRYKQLYGEELRLRKSLAAKLDRSNERLAEANTKLLS 2184



 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 48/192 (25%), Gaps = 19/192 (9%)

Query: 296  IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
            +   ++++  T   L          L  +    +R           +   +  H      
Sbjct: 1472 LSAKLEHERQTRQQLEAEAEAGRARLQAAIQEAERCQASRTEAERSLQRDREEHQRMQEK 1531

Query: 356  RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
             I       +  ++    L K +      +       L   EK  +L  L  +    +  
Sbjct: 1532 HIFESGTQRDTIQSLSQKLSKSEARANSFENECHRNALTLAEKAVLLETLAREKDQALSK 1591

Query: 416  LHT-HIKKLITR--------IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466
            L       L  R            +  ++    +  ++  + L+       L +G     
Sbjct: 1592 LKELEATVLNERDQTSRAGAKHEAMQERLAQAQSEAALLRQQLE-----EALNKG----- 1641

Query: 467  DTNNNFITQKRN 478
               +  +T    
Sbjct: 1642 SAKDKAVTDVHQ 1653


>gi|114588413|ref|XP_516644.2| PREDICTED: pleckstrin homology-like domain, family B, member 2
           isoform 7 [Pan troglodytes]
          Length = 1250

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|150395374|ref|YP_001325841.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150026889|gb|ABR59006.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 1226

 Score = 44.4 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 39/340 (11%), Positives = 97/340 (28%), Gaps = 34/340 (10%)

Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI 175
           L + +   K +  ++  F++  ++ I  +   I  +         D L+       +   
Sbjct: 147 LRSEIRGIKAEAAQDRRFAEDVRDDIERLSAGIKELGRQASPAEADALR-------IEFD 199

Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN----DEM 231
                ++G    + +     + N                    G  + L  F+    DE+
Sbjct: 200 ELRAMLEGLAREESMRRMENRWN--------------------GVEDRLNAFDQNRDDEL 239

Query: 232 IVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
           +  A     I   I+++   +   + +      A           P           L+ 
Sbjct: 240 VALAYRLDEIKAQINSLDKGSAVEVLEGKLVAVAKAIEMLGRQIQPDDRRFAPQFAGLDR 299

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
           RL+ I   +     N   +    +   +  L+    ++D L    +  L   I       
Sbjct: 300 RLDEISRAIAADDRNVAGADGSFVERLEGRLTDLSRQIDSLSVRGDSGLGARIEALAARV 359

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             + +   +  L   + +    +   +Q  E  +  H     + ++ +    + +     
Sbjct: 360 EDLASEKAAARLEERLDQLSAVLEHSRQGAEPDLTDH--LADISRRIEALSEYSVNNGLA 417

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            R+  L   I+ L    E     +       ++     L+
Sbjct: 418 ERLDDLARRIEGLAPHAEPTADRRFDRLEDRLAGIAERLE 457


>gi|297670370|ref|XP_002813345.1| PREDICTED: pleckstrin homology-like domain family B member 2-like
           isoform 1 [Pongo abelii]
 gi|297670372|ref|XP_002813346.1| PREDICTED: pleckstrin homology-like domain family B member 2-like
           isoform 2 [Pongo abelii]
          Length = 1253

 Score = 44.4 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|326435459|gb|EGD81029.1| hypothetical protein PTSG_10972 [Salpingoeca sp. ATCC 50818]
          Length = 1209

 Score = 44.4 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/172 (7%), Positives = 47/172 (27%), Gaps = 4/172 (2%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                        +           ++  +      Q L                 + + 
Sbjct: 600 HWQQQRVRAAQVEVAACQHEGWLVWSAWRRWHGAWRQQLQLQHVYTCAAAAHERWAVAVA 659

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
             R    F H  +   +   +H  ++ +Q +  +     + +  H+R   L  +  +   
Sbjct: 660 WRRWQGRFQHRQHI--ASVAVHVTRQQQQRLESRVWDRWRALTAHMRTQRLSTRRAMQQR 717

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQSF 452
           H+  ++    ++    +  +          +   ++   ++++ T    Q+ 
Sbjct: 718 HLQLQRRYLHLWRARCNAARQAAGHHNAAVMRTALRRMQSALAHTRAKQQAL 769


>gi|62089392|dbj|BAD93140.1| LL5 beta protein variant [Homo sapiens]
          Length = 1259

 Score = 44.4 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 653 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 712

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 713 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 770

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 771 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 829

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 830 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 881

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 882 KEHFRSLEERKKQ 894


>gi|27650425|emb|CAD42711.1| LL5 beta protein [Homo sapiens]
          Length = 1253

 Score = 44.4 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|197313730|ref|NP_001127910.1| pleckstrin homology-like domain family B member 2 isoform a [Homo
           sapiens]
 gi|197313732|ref|NP_001127911.1| pleckstrin homology-like domain family B member 2 isoform a [Homo
           sapiens]
 gi|84029396|sp|Q86SQ0|PHLB2_HUMAN RecName: Full=Pleckstrin homology-like domain family B member 2;
           AltName: Full=Protein LL5-beta
 gi|119600096|gb|EAW79690.1| pleckstrin homology-like domain, family B, member 2, isoform CRA_a
           [Homo sapiens]
 gi|148744368|gb|AAI42679.1| PHLDB2 protein [Homo sapiens]
 gi|152012502|gb|AAI50211.1| PHLDB2 protein [Homo sapiens]
 gi|168278024|dbj|BAG10990.1| pleckstrin homology-like domain family B member 2 [synthetic
           construct]
          Length = 1253

 Score = 44.4 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|147919533|ref|YP_686727.1| phosphoesterase (RecJ-like) [uncultured methanogenic archaeon RC-I]
 gi|110622123|emb|CAJ37401.1| predicted phosphoesterase (RecJ-like) [uncultured methanogenic
           archaeon RC-I]
          Length = 702

 Score = 44.4 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 8/99 (8%)

Query: 35  VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW--KGTLNKIEFLPEEGIEFLVIGKI 92
           V + GEI   +   +SG   F++ D    +    +   G     +   E+     V G+I
Sbjct: 206 VSISGEIVQVKQ--TSGPTIFTVADEEGSVSCAAFVEAGQRAFPDVGLED--MVKVTGEI 261

Query: 93  TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131
           T    ++  Q+ +  +     G      +  +  +    
Sbjct: 262 T--KRNNGLQLEVLDMKKLSDGDAAQVRKVIEDAIEARA 298


>gi|227494166|ref|ZP_03924482.1| single-stranded DNA-binding protein [Actinomyces coleocanis DSM
           15436]
 gi|226831900|gb|EEH64283.1| single-stranded DNA-binding protein [Actinomyces coleocanis DSM
           15436]
          Length = 202

 Score = 44.4 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 12/72 (16%)

Query: 48  HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQ-- 102
            +SG      KD  +  +   +W+     +     +G+  +V G++   ++ G    Q  
Sbjct: 42  RASGQW----KDGDALFMRCSVWREFAENVADSLSKGMRVVVQGRLIQRSYEGRDGSQRT 97

Query: 103 ---IIIESLIPS 111
              + ++ + PS
Sbjct: 98  SVELQVDEIGPS 109


>gi|307320679|ref|ZP_07600092.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
           AK83]
 gi|306893714|gb|EFN24487.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
           AK83]
          Length = 1220

 Score = 44.4 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 7/240 (2%)

Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270
           R  G  + L  F+    DE++  A     I   I+++       + +      A      
Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
                P +  L     +L+ RL+ I   +     N   +    +   +  L     ++D 
Sbjct: 281 GRQIQPDERRLAPQFADLDRRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L   ++  L   I         +     +  L   + +    +  K            R 
Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVL--KHNRPGAEPDLTDRL 398

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             + +K +      + +    R+  L   I  L   +E     +       ++   + L+
Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458


>gi|310794463|gb|EFQ29924.1| myb-like DNA-binding domain-containing protein [Glomerella
            graminicola M1.001]
          Length = 2384

 Score = 44.0 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 51/148 (34%), Gaps = 1/148 (0%)

Query: 301  KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            +       +  + +  +       R + +R  +     +E     + R     + R + +
Sbjct: 1682 EPAQQRPLAAAQPIQPAQPEPQVDRQQAERQQQMERQAIERQQIERQRLEQQQLERQQIE 1741

Query: 361  FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                  Q+  +  +E+QQ   Q +++        ++++I    + R+Q + +        
Sbjct: 1742 RQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQMERQQIERQQLE 1801

Query: 421  KKLITRIEFILSHKIKSCHTSVSITTRI 448
            ++ I R + I   +++          R 
Sbjct: 1802 RQAIER-QQIERQQLERQQMERQQAERQ 1828


>gi|326485094|gb|EGE09104.1| cell division control protein 3 [Trichophyton equinum CBS 127.97]
          Length = 542

 Score = 44.0 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 228 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 287

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 288 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 345

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  ++SA G +       W +   D      
Sbjct: 346 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVVSADGRKVRGRRYPWGVIEVDNEEHCD 405

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 406 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 465

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K        + + +    +   + + RQ + EK+  +E
Sbjct: 466 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 525

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 526 SGRPLEDKIKRKGFSLR 542


>gi|56421279|ref|YP_148597.1| DNA-directed DNA polymerase III subunit alpha [Geobacillus
            kaustophilus HTA426]
 gi|56381121|dbj|BAD77029.1| DNA-directed DNA polymerase III alpha subunit [Geobacillus
            kaustophilus HTA426]
          Length = 1091

 Score = 44.0 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 54   YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            +F++ D    ++A+ +     +   + +EG   L+ G I       + Q+II       +
Sbjct: 962  FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLTA 1019

Query: 114  GTLL 117
              L 
Sbjct: 1020 SALY 1023


>gi|326803733|ref|YP_004321551.1| DNA polymerase III, alpha subunit [Aerococcus urinae
            ACS-120-V-Col10a]
 gi|326651141|gb|AEA01324.1| DNA polymerase III, alpha subunit [Aerococcus urinae
            ACS-120-V-Col10a]
          Length = 1124

 Score = 44.0 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 33   SHVCVRGEISGYRGIHSSG---HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89
            S V + GEI   + I +      A+ +L+D HS ++ I +            EG++ LV 
Sbjct: 956  SQVTIIGEIVKVKRIQTKKNQPMAFLTLRDEHSEVEVIAFPKAYIDFAAYIREGLQVLVQ 1015

Query: 90   GKITTFPGSSKYQIIIESLIP 110
            GK  T       Q++++   P
Sbjct: 1016 GKTQT-RKQG-LQVVLDQCQP 1034


>gi|29565980|ref|NP_817551.1| gp102 [Mycobacterium phage Cjw1]
 gi|194303395|ref|YP_002014420.1| gp99 [Mycobacterium phage Porky]
 gi|29424705|gb|AAN01716.1| gp102 [Mycobacterium phage Cjw1]
 gi|194150880|gb|ACF33916.1| gp99 [Mycobacterium phage Porky]
          Length = 146

 Score = 44.0 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 41 ISGYRGIHSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          +S  R   + G+      D  +  +   IW+     +    ++G   +V G +
Sbjct: 34 VSNERRRDAQGNW----VDGDATFLRCTIWRDAAENVAESLQKGQRVIVHGYL 82


>gi|109302854|ref|YP_654856.1| gp101 [Mycobacterium phage 244]
 gi|194303153|ref|YP_002014568.1| gp100 [Mycobacterium phage Kostya]
 gi|88910145|gb|ABD58076.1| gp101 [Mycobacterium phage 244]
 gi|194153201|gb|ACF34267.1| gp100 [Mycobacterium phage Kostya]
 gi|255928420|gb|ACU42036.1| gp102 [Mycobacterium phage Pumpkin]
          Length = 146

 Score = 44.0 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 41 ISGYRGIHSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          +S  R   + G+      D  +  +   IW+     +    ++G   +V G +
Sbjct: 34 VSNERRRDAQGNW----VDGDATFLRCTIWRDAAENVAESLQKGQRVIVHGYL 82


>gi|55379177|ref|YP_137027.1| hypothetical protein rrnAC2518 [Haloarcula marismortui ATCC 43049]
 gi|55231902|gb|AAV47321.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 406

 Score = 44.0 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 33  SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW---KGTLNKIEFLPEEGIEFLVI 89
           S   V G +       + GH + +L+ + + +D   +   KG  N++    + G      
Sbjct: 251 SAYRVTGTVVEASETRAGGHVFLTLEGDGATLDCAAFEPTKGFRNRVR-SLKAGDRITAC 309

Query: 90  GKIT 93
           G++T
Sbjct: 310 GEVT 313


>gi|254414734|ref|ZP_05028499.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC
           7420]
 gi|196178582|gb|EDX73581.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC
           7420]
          Length = 1412

 Score = 44.0 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 51/157 (32%), Gaps = 11/157 (7%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
             + N L + +         +   R  L++   +L   L  +  +       +  + +  
Sbjct: 190 NDEFNQLQTQVAEEAKRQADIEQERRELEQQQHQLTSTLAQLQDQIAAQEIQLQEQAELT 249

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLR------YIFLEKKEKIAILHMLREQTKNRIF 414
               ++++ RQ +  +   ++       +          + +E + +  +   Q +++I 
Sbjct: 250 AQNQHLEQERQRLHHQIGKLQHQETDLNQSLARIAAQEQQAQENLNLYQIQLNQLQDQIA 309

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
              T   +L   +       ++     + I    L+S
Sbjct: 310 AQETQTSQLSQELAD-----LEQQRHQLEIYISNLES 341



 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/156 (7%), Positives = 48/156 (30%), Gaps = 6/156 (3%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +     + +  +     ++ ++    +   L ++       +  R+ +      +     
Sbjct: 117 EQLQTQVATQQRHKQELERAIASLTRQKQELEQDSAQLHTQLQARQDQETTLNYSLSAIA 176

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                ++ N   + ++   ++  V +  +     ++E+   L   + Q  + +  L   I
Sbjct: 177 AEKQRVEANIASLNDEFNQLQTQVAEEAKRQADIEQER-RELEQQQHQLTSTLAQLQDQI 235

Query: 421 KKLITRIE-----FILSHKIKSCHTSVSITTRILQS 451
                +++        +  ++     +      LQ 
Sbjct: 236 AAQEIQLQEQAELTAQNQHLEQERQRLHHQIGKLQH 271


>gi|326469758|gb|EGD93767.1| septin [Trichophyton tonsurans CBS 112818]
          Length = 523

 Score = 44.0 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 94/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 209 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 268

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 269 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 326

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  ++SA G +       W +   D      
Sbjct: 327 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVVSADGRKVRGRRYPWGVIEVDNEEHCD 386

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 387 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 446

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K        + + +    +   + + RQ + EK+  +E
Sbjct: 447 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 506

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 507 SGRPLEDKIKRKGFSLR 523


>gi|198458447|ref|XP_001361047.2| GA17478 [Drosophila pseudoobscura pseudoobscura]
 gi|198136346|gb|EAL25623.2| GA17478 [Drosophila pseudoobscura pseudoobscura]
          Length = 1476

 Score = 44.0 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 55/140 (39%), Gaps = 1/140 (0%)

Query: 311  LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
             +   N ++ L+  +  L  L      + + +  +  R      + ++S+  +    +N 
Sbjct: 970  QRVKTNLERDLAEQQQHLLELRERQREHEQQVKDQSERCTELEASHLESESQLQATIQNL 1029

Query: 371  QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            +  ++  +  EQ V++ ++   + +  ++A L          +  LH     L   ++  
Sbjct: 1030 RQQIDAFRLTEQGVQEKMQATSVAQASQMATLEARWSAANADVERLHEANDALQLAMDQ- 1088

Query: 431  LSHKIKSCHTSVSITTRILQ 450
             S +++    +++   R L+
Sbjct: 1089 QSQRLEELQETLAQKDRQLE 1108


>gi|194676794|ref|XP_001787994.1| PREDICTED: A-kinase anchor protein 13 [Bos taurus]
          Length = 1017

 Score = 44.0 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEK 376
           DQ L  S   L R        +E    R        +  ++     H  +K R +   E 
Sbjct: 642 DQKLLLSERALTRTASRPSSLIEQEKQRSLEKQRQDLANLQRQQAQHQEEKRRHEREWES 701

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++   Q  +  L     E +     L   RE+ + R       +++L          +++
Sbjct: 702 RERALQEREARLAQREDELRRSCQDLEREREELQQRKGAYQGDLERL-----RAAQRQLE 756

Query: 437 SCHTSVSITTRIL 449
                +   +  L
Sbjct: 757 REQEQLRRDSERL 769


>gi|304313942|ref|YP_003849089.1| hypothetical protein MTBMA_c01670 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587401|gb|ADL57776.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 130

 Score = 44.0 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 14/115 (12%)

Query: 6   QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65
              SL  P   VS+L      +++     + V G +     +  SG     + D    + 
Sbjct: 25  SSASLTPPVVRVSDLDRA---MMDRE---ITVEGTVMAVHELE-SGTLLLKINDGTGTVT 77

Query: 66  AIIWKGTLNKIEFLPE--EGIEFLVIGKITTFPGSSKYQIIIE---SLIPSGSGT 115
           A+ +K     +E  PE   G+   V G++  +      +I++E   S++P   G+
Sbjct: 78  AVAFKSVSKDMELSPEILSGMRIQVTGRVKEYH--GSLEIVVEKPSSIMPKSFGS 130


>gi|289811727|ref|ZP_06542356.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 120

 Score = 43.6 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 7/90 (7%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           ++       + + +  +   +Q +   ++  ++     ++     L   ++  + RI  +
Sbjct: 31  LQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLS--QQNPQPRIHRV 88

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITT 446
            + I++L  R+   +  ++           
Sbjct: 89  QSRIQQLEYRLTENIRSRLSEQRERFGNAV 118


>gi|302661429|ref|XP_003022382.1| hypothetical protein TRV_03446 [Trichophyton verrucosum HKI 0517]
 gi|291186325|gb|EFE41764.1| hypothetical protein TRV_03446 [Trichophyton verrucosum HKI 0517]
          Length = 537

 Score = 43.6 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 223 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 282

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 283 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 340

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + SA G +       W +   D      
Sbjct: 341 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 400

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 401 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 460

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          + +    +   + + RQ + EK+  +E
Sbjct: 461 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 520

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 521 SGRPLEDKIKRKGFSLR 537


>gi|302509026|ref|XP_003016473.1| Similar to sporulation-specific protein of the yeast CDC3/10/11/12
           [Arthroderma benhamiae CBS 112371]
 gi|291180043|gb|EFE35828.1| hypothetical protein ARB_04762 [Arthroderma benhamiae CBS 112371]
          Length = 543

 Score = 43.6 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 229 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 288

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 289 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 346

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + SA G +       W +   D      
Sbjct: 347 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 406

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 407 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 466

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          + +    +   + + RQ + EK+  +E
Sbjct: 467 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 526

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 527 SGRPLEDKIKRKGFSLR 543


>gi|195154531|ref|XP_002018175.1| GL16908 [Drosophila persimilis]
 gi|194113971|gb|EDW36014.1| GL16908 [Drosophila persimilis]
          Length = 1476

 Score = 43.6 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 55/140 (39%), Gaps = 1/140 (0%)

Query: 311  LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
             +   N ++ L+  +  L  L      + + +  +  R      + ++S+  +    +N 
Sbjct: 970  QRVKTNLERDLAEQQQHLLELRERQREHEQQVKDQSERCTELEASHLESESQLQATIQNL 1029

Query: 371  QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            +  ++  +  EQ +++ ++   + +  ++A L          +  LH     L   ++  
Sbjct: 1030 RQQIDAFRLTEQGIQEKMQATNVAQASQMATLEARWSAANADVERLHEANDALQLAMDQ- 1088

Query: 431  LSHKIKSCHTSVSITTRILQ 450
             S +++    +++   R L+
Sbjct: 1089 QSQRLEELQETLAQKDRQLE 1108


>gi|121711515|ref|XP_001273373.1| septin AspB [Aspergillus clavatus NRRL 1]
 gi|119401524|gb|EAW11947.1| septin AspB [Aspergillus clavatus NRRL 1]
          Length = 525

 Score = 43.6 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 82/275 (29%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E      
Sbjct: 253 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFK 312

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 313 Q--RILADIQHHSIKIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVATADGRKVR 370

Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                W +   D                    +    ++    E   +  + ++   +  
Sbjct: 371 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNTLYEDYRSEKLTQMGVAQDP 430

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 431 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 490

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 491 DQLERQRQELEEKKSRLESGRPIEEKGKRKGFSLR 525


>gi|330913891|ref|XP_003296411.1| hypothetical protein PTT_06507 [Pyrenophora teres f. teres 0-1]
 gi|311331443|gb|EFQ95491.1| hypothetical protein PTT_06507 [Pyrenophora teres f. teres 0-1]
          Length = 1520

 Score = 43.6 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 58/167 (34%), Gaps = 6/167 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
           P  +           +      + ++          + +    Q +   +  +D   + +
Sbjct: 439 PPPQAEPLRQYEQHRQYMEEPQQYMEEPRYYPEEPQQYMDEPRQYVEPPQQYMDEPRQYV 498

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL--RYIFL 393
           E   +  +    ++      +++    + ++++ R+ + + +QHIEQ  +     R    
Sbjct: 499 EPP-QQYMEEPRQYVEPPRQQVE--SPLQHVEQPRRSVEQMRQHIEQPRQHVQPLRQHVE 555

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            ++++I  L    E  + ++  L    +    RIE  L  + +    
Sbjct: 556 PQQQRIEPLRQYTEPPRQQVEPLRQQPEPRRQRIEP-LRQQSEPQRQ 601



 Score = 40.1 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 52/180 (28%), Gaps = 17/180 (9%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE----ARLNNIIIRLIKYKINTLNSLL 311
            D +     P P  A  +    +                       + +      +    
Sbjct: 429 MDMSRQPVEPPPPQAEPLRQYEQHRQYMEEPQQYMEEPRYYPEEPQQYMDEPRQYVEPPQ 488

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEI------IIFRKYRHFNHIINRIKSDFLIHN 365
           + +    Q +   +  ++   + +E   +        + +  R    +   I+      +
Sbjct: 489 QYMDEPRQYVEPPQQYMEEPRQYVEPPRQQVESPLQHVEQPRRSVEQMRQHIEQ--PRQH 546

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +Q  RQH+  +QQ IE +     R      ++++  L    E  + RI  L    +    
Sbjct: 547 VQPLRQHVEPQQQRIEPL-----RQYTEPPRQQVEPLRQQPEPRRQRIEPLRQQSEPQRQ 601


>gi|114603379|ref|XP_001152944.1| PREDICTED: serine/threonine kinase 10 [Pan troglodytes]
          Length = 937

 Score = 43.6 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 683 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 740

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 741 ELLRKHEKEREQMQRYNQRMTEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 800

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 801 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 860

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 861 VEHETQKLKALD 872


>gi|73670910|ref|YP_306925.1| hypothetical protein Mbar_A3472 [Methanosarcina barkeri str.
           Fusaro]
 gi|72398072|gb|AAZ72345.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 710

 Score = 43.6 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 14/176 (7%)

Query: 19  ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78
           E+   +K  +      + + GE+   +   +SG   F++ D    +    ++    +   
Sbjct: 203 EIDSSMKGKL------LRIEGEVIQVKQ--TSGPTIFTISDEGGFVPCAAFESAGKRSYP 254

Query: 79  LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138
             + G+   + G++T      + QI + S+     G     ++ R +++++E        
Sbjct: 255 HIDVGMIVSITGEVTL--RDDQIQIEVMSMKLLT-GEKEAVVKGRVERVIDEKASPADIP 311

Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
             +      +  +      V ++I + I    P+ ++       G      I  AI
Sbjct: 312 FLVQSEI--MEKLKPRMLHVAKEIKKAILHSTPI-ILRHHADADGITSAIAIERAI 364


>gi|145537942|ref|XP_001454682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422448|emb|CAK87285.1| unnamed protein product [Paramecium tetraurelia]
          Length = 538

 Score = 43.2 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 5/166 (3%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           + L+ S   LE             ++    S ++ L    + +   R   +RL     + 
Sbjct: 350 DDLRRSRERLEQLEQERKNNEQLEELRKSRSRIEELQKQRRRIEDLRTSQERLDALKRNR 409

Query: 339 LEIIIFRKYRHFNHI---INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
            E  + R     N +     R++    +   ++ ++ + E +Q  E++ +  +    +++
Sbjct: 410 DEQELRRSQERLNDLKKSRERLEQIEALRQSREQQRALDELRQSRERLDQLRVSQNRIDQ 469

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            E          Q +  I Y     K  + R+E  L  +++     
Sbjct: 470 LENERKALQRSRQIEREIEYERQRSKDRLERLE--LEAQLERQRER 513



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 47/148 (31%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                 L+ L  S + L   R   +RL +  E         +         R      + 
Sbjct: 284 QKSRERLEDLRRSRERLDDLRRSRERLNQLEELQRSRQRIEQLEDLKKSRERQAQIDELR 343

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             ++    +   ++ +EQ+ ++      LE+  K        ++ + RI  L T  ++L 
Sbjct: 344 RSRERLDDLRRSRERLEQLEQERKNNEQLEELRKSRSRIEELQKQRRRIEDLRTSQERLD 403

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSF 452
                    +++     ++   +  +  
Sbjct: 404 ALKRNRDEQELRRSQERLNDLKKSRERL 431


>gi|260788742|ref|XP_002589408.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae]
 gi|229274585|gb|EEN45419.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae]
          Length = 1219

 Score = 43.2 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 46/153 (30%), Gaps = 12/153 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             + +L + L      L           +    +L   +  +      +           
Sbjct: 109 QMVQNLTRELQEQQIRLLTRLQEQKTSQQGQIGSLSDQLSEERVRSAELKQNF-----TR 163

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI---K 421
            +Q+    +  + Q++ Q +++    +  + +     L         +   L   +   K
Sbjct: 164 KLQEQETRLQTQVQNLAQELQEQETRLQTQVQNLTQELQEQNTSFWTQTVSLSNQLLEEK 223

Query: 422 KLITRIEFILSHKIKSC----HTSVSITTRILQ 450
            +  R+E  L+ K++         +   T+ LQ
Sbjct: 224 GMSVRLEQNLTRKLEEQETRIRARLQNLTQELQ 256



 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 38/110 (34%), Gaps = 5/110 (4%)

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
             R       + + + +      +      + +++    Q+V+   R +  ++   +  L
Sbjct: 72  TTRLKNQVERLSSLVDTLLP--RLDSLSAELSKEKVKSAQMVQNLTRELQEQQIRLLTRL 129

Query: 403 HMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKSCHTSVSITTRIL 449
              +   + +I  L   + +   R   ++   + K++   T +    + L
Sbjct: 130 QEQKTSQQGQIGSLSDQLSEERVRSAELKQNFTRKLQEQETRLQTQVQNL 179


>gi|47125294|gb|AAH70077.1| Serine/threonine kinase 10 [Homo sapiens]
          Length = 968

 Score = 43.2 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 892 VEHETQKLKALD 903


>gi|126362971|ref|NP_005981.3| serine/threonine-protein kinase 10 [Homo sapiens]
 gi|12643358|sp|O94804|STK10_HUMAN RecName: Full=Serine/threonine-protein kinase 10; AltName:
           Full=Lymphocyte-oriented kinase
 gi|4001688|dbj|BAA35073.1| protein kinase [Homo sapiens]
 gi|119581843|gb|EAW61439.1| serine/threonine kinase 10 [Homo sapiens]
 gi|189053883|dbj|BAG36152.1| unnamed protein product [Homo sapiens]
          Length = 968

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 892 VEHETQKLKALD 903


>gi|332225345|ref|XP_003261841.1| PREDICTED: pleckstrin homology-like domain family B member 2
           isoform 1 [Nomascus leucogenys]
 gi|332225347|ref|XP_003261842.1| PREDICTED: pleckstrin homology-like domain family B member 2
           isoform 2 [Nomascus leucogenys]
          Length = 1253

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLVSQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|33304017|gb|AAQ02516.1| serine/threonine kinase 10 [synthetic construct]
          Length = 969

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 892 VEHETQKLKALD 903


>gi|148678542|gb|EDL10489.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_c
           [Mus musculus]
          Length = 876

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +    +  + +E +    +            S  + L      L   R    +   
Sbjct: 292 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 351

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +L+  L+ +               + +       + +  +L+ +    +     +R    
Sbjct: 352 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 411

Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             + +++++    E  + ++         +++  R+     + ++   +      + LQ 
Sbjct: 412 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 471

Query: 452 FA 453
            +
Sbjct: 472 LS 473


>gi|332248198|ref|XP_003273249.1| PREDICTED: serine/threonine-protein kinase 10 [Nomascus leucogenys]
          Length = 961

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 707 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 764

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 765 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 824

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 825 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 884

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 885 VEHETQKLKALD 896


>gi|145348896|ref|XP_001418879.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579109|gb|ABO97172.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 644

 Score = 43.2 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 58/193 (30%), Gaps = 7/193 (3%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
             A  PT A   A P          +LE    + + +  +      +  +K L +  +  
Sbjct: 249 RHAAPPTNAP--ADPRAGAEYKVAYDLEVWKQHQMTKFYEDLRMKESVRMKILEDEWRRH 306

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI-----KSDFLIHNIQKNRQHILEK 376
              R R           +E  +            ++       D   H +++      E+
Sbjct: 307 ETQRAREAEEGANRLRIMEKKLQEAAVALESRERKLVELEENFDHRKHKLERETSRAREE 366

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
            +   +  ++   +    +K+K       R+    R+ +    + +L +        +++
Sbjct: 367 AKDSIRRNQETSEHRVEMEKQKAREAIRERDSLHRRLEHADAQLIELESSFAAHKKAQLE 426

Query: 437 SCHTSVSITTRIL 449
           +   ++      L
Sbjct: 427 TNEAALQAEISRL 439


>gi|145976948|ref|NP_766148.2| centrobin [Mus musculus]
 gi|85540706|sp|Q8CB62|CNTRB_MOUSE RecName: Full=Centrobin; AltName: Full=Centrosomal
           BRCA2-interacting protein; AltName:
           Full=LYST-interacting protein 8
 gi|168984396|emb|CAQ13013.1| centrobin, centrosomal BRCA2 interacting protein [Mus musculus]
          Length = 887

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +    +  + +E +    +            S  + L      L   R    +   
Sbjct: 303 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 362

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +L+  L+ +               + +       + +  +L+ +    +     +R    
Sbjct: 363 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 422

Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             + +++++    E  + ++         +++  R+     + ++   +      + LQ 
Sbjct: 423 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 482

Query: 452 FA 453
            +
Sbjct: 483 LS 484


>gi|194860747|ref|XP_001969648.1| GG23835 [Drosophila erecta]
 gi|190661515|gb|EDV58707.1| GG23835 [Drosophila erecta]
          Length = 692

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 62/193 (32%), Gaps = 8/193 (4%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
                +  + PV          L+ +   I       K+ TL  L +      + ++   
Sbjct: 213 NSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEKLLTLQRLQRLHQQKRRQMAEVC 272

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
             + RL        E+ +  +        +   S    H++ +    +L +QQ I  +  
Sbjct: 273 REIARLSVHCVTRNELRLKPRTTSL----SGDHSAHQYHSMGRALSVLLAEQQQIAPLTL 328

Query: 386 QHLRYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
            + + +         +  +L   RE  + R       ++++  +    L  ++ S    +
Sbjct: 329 YNAQQLTRRIEALSSQQRLLKAERETFRQRNERARQRLEEMREQ-REALQKQLHSQRHRL 387

Query: 443 SITTRILQSFAYK 455
                 L++ A +
Sbjct: 388 EKERLELRTLAPQ 400



 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 53/182 (29%), Gaps = 6/182 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +H      ++   L+ ++    +    TL +  +     +   S  R          +
Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395
            N       +         + +     H ++K R  +     QH+EQ  +   R+I  + 
Sbjct: 358 RNERARQRLEEMREQREALQKQLHSQRHRLEKERLELRTLAPQHLEQ--RDQRRHIERQV 415

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +++ L +  ++  N                   +           +   ++L + +  
Sbjct: 416 ERRMSTLVLELQEIYNIQNVGSRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472

Query: 456 NT 457
             
Sbjct: 473 AV 474


>gi|24641628|ref|NP_727647.1| CG32650 [Drosophila melanogaster]
 gi|22832167|gb|AAF48208.2| CG32650 [Drosophila melanogaster]
          Length = 346

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/206 (8%), Positives = 61/206 (29%), Gaps = 2/206 (0%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +++D + +L   +P    E+A P  +    ++      +   +      +    + 
Sbjct: 24  DIDGSVSDGSEELEEQSPEQIEEIAWPQMKREIGAMNRTLDEIQAQLAIDFHERDGGRSC 83

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             +      + L     R   +    E  L  + +   R    + + ++   L       
Sbjct: 84  WEEEQEALAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLADLVRCSELGRARISA 143

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITRI 427
              + ++Q       +Q    +      K        ++ +    ++     + K+   +
Sbjct: 144 LDRLFQRQTKELVGCRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRHL 203

Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453
           +      ++   + +       Q+  
Sbjct: 204 KEAYKKILERTQSRLEYAEIKRQALD 229


>gi|307307025|ref|ZP_07586764.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
           BL225C]
 gi|306901965|gb|EFN32564.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
           BL225C]
          Length = 1220

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 7/240 (2%)

Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270
           R  G  + L  F+    DE++  A     I   I+++       + +      A      
Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
                P +  L     +L+ RL+ I   +     N   +    +   +  L     ++D 
Sbjct: 281 GRQIQPDERRLAPQFADLDKRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L   ++  L   I         +     +  L   + +    +               R 
Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVLE--HNRPGAEPDLTDRL 398

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             + +K +      + +    R+  L   I  L   +E     +       ++   + L+
Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458


>gi|297676652|ref|XP_002816236.1| PREDICTED: serine/threonine-protein kinase 10-like isoform 1 [Pongo
           abelii]
 gi|297676654|ref|XP_002816237.1| PREDICTED: serine/threonine-protein kinase 10-like isoform 2 [Pongo
           abelii]
          Length = 968

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 892 VEHETQKLKALD 903


>gi|289548463|ref|YP_003473451.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484]
 gi|289182080|gb|ADC89324.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484]
          Length = 1165

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 18/207 (8%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
              + E  +  +          +    N++   +K     L    + +    Q L     
Sbjct: 246 TIESKEKVLREELASLRQQEEEKQGELNLLEEKLKELREKLLPHREMVGRLSQKLESISN 305

Query: 327 RLDRLPRELEHNLEII--IFRKYRHFNHIINRIKSD--FLIHNIQKNRQHILEKQQHIEQ 382
           RL ++ R  E  L+    + R+  H  H  +R++ +   L H + +  + + E +  +E+
Sbjct: 306 RLQQIARTKEELLDQRTTLERQLEHLKHDADRLRIEKEDLAHQLIQREEELTEDEVMLEE 365

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI------LSHKIK 436
           + K        EK+  +       E  + RI  L   ++    ++  +      +  +I+
Sbjct: 366 LQK-----TLQEKESFLKASFGELESVEERIKKLEGTLRHKKDQLSQLEIKIKDIQLRIE 420

Query: 437 SCHTSVSITTRILQSF---AYKNTLKR 460
                +  T R L+S    +  + L++
Sbjct: 421 RLEEELQNTERELESLKEGSKDSVLQK 447


>gi|321478076|gb|EFX89034.1| hypothetical protein DAPPUDRAFT_310878 [Daphnia pulex]
          Length = 811

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 20/259 (7%)

Query: 220 SIEDLWHFNDEMIVRAIANSSI----PIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275
           S   +    D  + R   + +      ++S   HE       + A+ R  T     +   
Sbjct: 265 SRTGVCIGCDAGMCRTFFHVTCAQRDGLLSETFHEETVQADPFYANCRLHTEKSTIKRRK 324

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                 Q  L+    + N     L   +   ++          Q +        R     
Sbjct: 325 QNYLSHQRHLVWWTNKRNTGRDLLTSGQSEDVSLRRILRKLGRQRVKFQTKHWPRASWVP 384

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI------LEKQQHIEQIVKQHLR 389
              +  ++         +  +     +    ++ R+        L K+ HI         
Sbjct: 385 TQKMPRLLTTCASAVRRLRAKAVLMAVDVEAEEVREAQVSALSDLPKKWHIPPAFSVEFI 444

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHKIKSC----HTSVS 443
              ++++ +IA L       K     L    K+   R + ++   + +K+        ++
Sbjct: 445 AYVIDRERRIAQLREQTTSMKEESRELDDSEKQWRLRYDCLIEEQNLLKNRETAYRNQLN 504

Query: 444 ITTRILQSFAYKNTLKRGY 462
               IL + +     KRG+
Sbjct: 505 TLHHILSAVSP----KRGF 519


>gi|307544966|ref|YP_003897445.1| hypothetical protein HELO_2376 [Halomonas elongata DSM 2581]
 gi|307216990|emb|CBV42260.1| hypothetical protein HELO_2376 [Halomonas elongata DSM 2581]
          Length = 1226

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 59/212 (27%), Gaps = 14/212 (6%)

Query: 250 ETDWTLADYAADLRAPTPT-----GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
           E D  +AD  + L    P        AE  +   E   +              +      
Sbjct: 256 EVDRDIADLESTLWQLGPQLDADRHRAERVLADTEAELNVQQEAFQARERDYEQARDTLN 315

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDF 361
           + ++ L   L  + ++L+  + + ++        LE  +    +       +   +    
Sbjct: 316 DRISELASELDRTQRSLNDLQQQYEQYAEADMPALERDLAELPQWRGQVQELQQHLALMQ 375

Query: 362 LIHNIQKNRQ--HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++R    + E   ++ +   +    I     EK A         ++     H  
Sbjct: 376 DAAQENQSRLDGRLRELADNLSRRSDEIQALIDELGDEKAACQERQWAAERDLEAQYHAR 435

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                  ++     +++     ++     L S
Sbjct: 436 ----RAELDASYQQRLEQGIERLADLKAQLDS 463


>gi|208434884|ref|YP_002266550.1| exonuclease VII, large subunit [Helicobacter pylori G27]
 gi|208432813|gb|ACI27684.1| exonuclease VII, large subunit [Helicobacter pylori G27]
          Length = 90

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 40/89 (44%)

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
           +SAIGHE D+ L+D  ADLRA TP+ A E+ +P  +     L     +L      L+  K
Sbjct: 1   MSAIGHENDFLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRRSFKILLHQK 60

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLP 332
              L  L   L   +  ++ S      L 
Sbjct: 61  KAHLEHLADFLEKRNYPVNHSEPGSQALH 89


>gi|123443387|ref|YP_001007361.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122090348|emb|CAL13216.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 1229

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 61/194 (31%), Gaps = 8/194 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           A +A       Q     L  +    +  LI  + ++L  L   L         S+ +L+ 
Sbjct: 336 ANLARQQHATNQHEQETLIEQKVVPLDNLIAQQQHSLMLLGTQLEQLRTKKQQSKQQLEL 395

Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
             ++ +   + +         +  +     +  +   Q  + H+ ++Q    +   Q   
Sbjct: 396 NEQQFKLAYQRLQQLTEYTQQYAHHQHWAKNLPLWREQFRQLHMQQQQSVESEQQLQQQA 455

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448
            +    +++I  L+   +Q +  +   H+    +  ++  +   +        +    + 
Sbjct: 456 RLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515

Query: 449 ------LQSFAYKN 456
                 L + +   
Sbjct: 516 RPVRQQLAALSPLA 529


>gi|45825121|gb|AAS77468.1| AT08472p [Drosophila melanogaster]
          Length = 346

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/206 (8%), Positives = 61/206 (29%), Gaps = 2/206 (0%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           + D +++D + ++   +P    E+A P  +    ++      +   +      +    + 
Sbjct: 24  DIDGSVSDGSEEVEEQSPEQIEEIAWPQMKREIGAMNRTLDEIQAQLAIDFHERDGGRSC 83

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             +      + L     R   +    E  L  + +   R    + + ++   L       
Sbjct: 84  WEEEQEALAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLADLVRCSELGRARISA 143

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITRI 427
              + ++Q       +Q    +      K        ++ +    ++     + K+   +
Sbjct: 144 LDRLFQRQTKELVGCRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRHL 203

Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453
           +      ++   + +       Q+  
Sbjct: 204 KEAYKKILERTQSRLEYAEIKRQALD 229


>gi|259648496|dbj|BAI40658.1| antimicrobial peptide ABC transporter permease component
           [Lactobacillus rhamnosus GG]
          Length = 1097

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
            + +G+ ++         +   +             K    +     +   +        
Sbjct: 179 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 238

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379
           +         ++   +  I    +  +    ++ S           +   +Q I  KQQ 
Sbjct: 239 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 298

Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           ++  VK              +   +++   +     K ++      +      +      
Sbjct: 299 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 357

Query: 434 KIKSCHTSVSITTRILQS 451
           ++ + +  ++ +   L +
Sbjct: 358 QLDTANQQLANSQAQLAA 375


>gi|199599007|ref|ZP_03212415.1| ABC transporter [Lactobacillus rhamnosus HN001]
 gi|199590115|gb|EDY98213.1| ABC transporter [Lactobacillus rhamnosus HN001]
          Length = 1101

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
            + +G+ ++         +   +             K    +     +   +        
Sbjct: 183 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 242

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379
           +         ++   +  I    +  +    ++ S           +   +Q I  KQQ 
Sbjct: 243 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 302

Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           ++  VK              +   +++   +     K ++      +      +      
Sbjct: 303 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 361

Query: 434 KIKSCHTSVSITTRILQS 451
           ++ + +  ++ +   L +
Sbjct: 362 QLDTANQQLANSQAQLAA 379


>gi|91773749|ref|YP_566441.1| phosphoesterase, RecJ-like protein [Methanococcoides burtonii DSM
           6242]
 gi|91712764|gb|ABE52691.1| Nucleic acid binding protein [Methanococcoides burtonii DSM 6242]
          Length = 707

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 35  VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           V + GE+   +     G   F++ D    I    ++    +     +  +     G++T 
Sbjct: 211 VKIEGEVIQVKQTA--GPTIFTISDEDGLISCAAFESAGTRAFPEIDADMIITATGEVT- 267

Query: 95  FPGSS-KYQIIIESL 108
                 + Q+ + S+
Sbjct: 268 --SRGDRLQLEVRSM 280


>gi|17375431|sp|P74750|DPO3A_SYNY3 RecName: Full=DNA polymerase III subunit alpha; Contains: RecName:
            Full=Ssp dnaE intein
          Length = 1355

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 54   YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
            + +L+D   + +A+++     +++ +  EG + ++ GK+       +YQ+I+E L P 
Sbjct: 1207 FLTLEDMSGQSEAVVFPSNYERLQDVLIEGSQQMIWGKVD--RRDDQYQLIVEDLEPV 1262


>gi|258507126|ref|YP_003169877.1| ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257147053|emb|CAR86026.1| ABC transporter permease protein [Lactobacillus rhamnosus GG]
          Length = 1101

 Score = 43.2 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
            + +G+ ++         +   +             K    +     +   +        
Sbjct: 183 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 242

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379
           +         ++   +  I    +  +    ++ S           +   +Q I  KQQ 
Sbjct: 243 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 302

Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           ++  VK              +   +++   +     K ++      +      +      
Sbjct: 303 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 361

Query: 434 KIKSCHTSVSITTRILQS 451
           ++ + +  ++ +   L +
Sbjct: 362 QLDTANQQLANSQAQLAA 379


>gi|307297642|ref|ZP_07577448.1| metal dependent phosphohydrolase [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916902|gb|EFN47284.1| metal dependent phosphohydrolase [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 353

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
            +L D    I AI W     + +   E+G+   + G++  +    +  +  E +     G
Sbjct: 62  LTLSDKTGAIRAIDW-FNAERNDSTLEQGMVVRISGRVAVYEDRIQLNLDSEGIQILQVG 120


>gi|47218622|emb|CAG04951.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/189 (7%), Positives = 51/189 (26%), Gaps = 13/189 (6%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
            TP+      +P +   +   ++        I  ++      +              +  
Sbjct: 1   MTPSSGISAGLPFRFRPRREKVDWRRIHAVDIDHVVSQLDVDVLQEHINTVTFCSLDAEQ 60

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             R           L  +      + NH     K    +             Q   E+ +
Sbjct: 61  CQRCQSPMDLTLMKLFRLAQLSEANLNHSAKNEKPASPV-------------QSQAERDL 107

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
             +        ++    +     +  +R+    +  ++   R++  ++ +++    ++  
Sbjct: 108 DNYKELQLQAIQKLEQQMKKQLLKEMSRMQSSVSDHQEQSQRLQQEMTKRLQEKEQTIKA 167

Query: 445 TTRILQSFA 453
               L++ +
Sbjct: 168 QREQLKTLS 176


>gi|315050912|ref|XP_003174830.1| cell division control protein 3 [Arthroderma gypseum CBS 118893]
 gi|311340145|gb|EFQ99347.1| cell division control protein 3 [Arthroderma gypseum CBS 118893]
          Length = 538

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 224 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 283

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 284 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 341

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + S  G +       W +   D      
Sbjct: 342 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSTDGRKVRGRRYPWGVIEVDNEEHCD 401

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 402 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 461

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K        + + +    +   + + RQ + EK+  +E
Sbjct: 462 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 521

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 522 SGRPLEDKIKRKGFSLR 538


>gi|291387818|ref|XP_002710248.1| PREDICTED: serine/threonine kinase 10 [Oryctolagus cuniculus]
          Length = 968

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/192 (7%), Positives = 54/192 (28%), Gaps = 5/192 (2%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            +         +         L       +  + ++++   + L K        L     
Sbjct: 712 TSDNRREICDKERECLGRKQELLREREAALWEMEEHQLQERHQLAKQQLKDQYFLQRFSP 771

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            +  L +     ++    R          + K+        + +  +   ++ +      
Sbjct: 772 SMPSLGKLEREQMQRYNQRMVEQLKLRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMMAQCESNMSELQQLQNEKCHLL 891

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 892 VEHETQKLKALD 903


>gi|261418242|ref|YP_003251924.1| DNA polymerase III subunit alpha [Geobacillus sp. Y412MC61]
 gi|319767798|ref|YP_004133299.1| DNA polymerase III subunit alpha [Geobacillus sp. Y412MC52]
 gi|261374699|gb|ACX77442.1| DNA polymerase III, alpha subunit [Geobacillus sp. Y412MC61]
 gi|317112664|gb|ADU95156.1| DNA polymerase III, alpha subunit [Geobacillus sp. Y412MC52]
          Length = 1092

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 54   YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            +F++ D    ++A+ +     +   + +EG   L+ G I       + Q+II        
Sbjct: 961  FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLLV 1018

Query: 114  GTLL 117
              L 
Sbjct: 1019 SALY 1022


>gi|160333855|ref|NP_001103956.1| filamin A-interacting protein 1-like [Danio rerio]
 gi|160385738|sp|A3KNA5|FIL1L_DANRE RecName: Full=Filamin A-interacting protein 1-like
 gi|126631251|gb|AAI33735.1| Zgc:158292 protein [Danio rerio]
          Length = 1129

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 76/220 (34%), Gaps = 7/220 (3%)

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL---EARLNNII 296
              ++ ++  +     + +  D+          +    +E  +  L  L   E    + +
Sbjct: 105 PTAVLKSLQRDGLQQSSGWQEDIYEKPIAELDRLVEKQRETHRRMLEQLLLVERAHKHTL 164

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            RL   K N  + + K+  +    L   R RL +L  + +   E       +   ++ + 
Sbjct: 165 HRLEDEKKNHRDFMKKS-DDFTSLLEHDRERLKQLIDQEKTYQERKEEESNKQVTNLKDE 223

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +        +  + Q  L +Q   +    Q L+    + +E++       +  +N++  L
Sbjct: 224 LTKLKSFALLVVDEQQRLTEQLSQQITKVQELQNSAGQAQEELNSAQTRLQDEENKVLRL 283

Query: 417 HTHIKKLI---TRIEFILSHKIKSCHTSVSITTRILQSFA 453
              ++K      + +  ++ K+ +         + L S +
Sbjct: 284 EEELRKQTCHFHQEQDAMTAKLTNEDAQNRQLRQKLSSLS 323


>gi|297529096|ref|YP_003670371.1| DNA polymerase III subunit alpha [Geobacillus sp. C56-T3]
 gi|297252348|gb|ADI25794.1| DNA polymerase III, alpha subunit [Geobacillus sp. C56-T3]
          Length = 1092

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 54   YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            +F++ D    ++A+ +     +   + +EG   L+ G I       + Q+II        
Sbjct: 961  FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLLV 1018

Query: 114  GTLL 117
              L 
Sbjct: 1019 SALY 1022


>gi|329665086|ref|NP_001193237.1| pleckstrin homology-like domain family B member 2 [Bos taurus]
 gi|297470848|ref|XP_002684815.1| PREDICTED: hypothetical protein [Bos taurus]
 gi|296491493|gb|DAA33546.1| hypothetical protein BOS_811 [Bos taurus]
          Length = 1254

 Score = 43.2 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 62/192 (32%), Gaps = 12/192 (6%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L      L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKITELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     +    + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVT 823

Query: 454 YKNTLKRGYTSI 465
             NTLK GY  +
Sbjct: 824 P-NTLKEGYIIV 834


>gi|148678541|gb|EDL10488.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_b
           [Mus musculus]
          Length = 796

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +    +  + +E +    +            S  + L      L   R    +   
Sbjct: 212 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 271

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +L+  L+ +               + +       + +  +L+ +    +     +R    
Sbjct: 272 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 331

Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             + +++++    E  + ++         +++  R+     + ++   +      + LQ 
Sbjct: 332 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 391

Query: 452 FA 453
            +
Sbjct: 392 LS 393


>gi|88810626|ref|ZP_01125883.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231]
 gi|88792256|gb|EAR23366.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231]
          Length = 1170

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/171 (7%), Positives = 50/171 (29%), Gaps = 16/171 (9%)

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR-HFNHIINRIKSD 360
           ++ + +      +      ++ +R     + R  +  L+  + R         ++  +  
Sbjct: 725 HRRDQIRQRRSVIAQEQTEIAATRQDTVEVIRTAQARLQEALERGETLERERALHNEEQQ 784

Query: 361 FLIHNIQKNRQHILEKQQHIE------------QIVKQHLRYIFLEKKEKIAILHMLREQ 408
            L   +   +    E Q  +             Q   +        ++E++       E 
Sbjct: 785 RLQAQLATAQNRCNELQARLHELTLQEQSVATAQAALEESFTRLQTRRERLLTRDAELEA 844

Query: 409 TKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQSFAYKN 456
              ++      ++    R+   +  +  +++     +  + R L+    + 
Sbjct: 845 VLAQLDAPEAELESERERLLARQRTVEEELRQARRELDESGRRLRELEPQR 895


>gi|238795235|ref|ZP_04638819.1| Exonuclease SbcC [Yersinia intermedia ATCC 29909]
 gi|238725428|gb|EEQ16998.1| Exonuclease SbcC [Yersinia intermedia ATCC 29909]
          Length = 1157

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/189 (11%), Positives = 53/189 (28%), Gaps = 8/189 (4%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
             +   Q     L  +    +  LI  + ++L      L          R +L+   ++L
Sbjct: 271 QQQAARQHEQETLIEQKVVPLDNLIAQQQHSLAQFAAQLQQLRGKEQQGRQQLELNEQQL 330

Query: 336 EHNLEIIIF-----RKYRHFNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQH 387
               + +       ++Y H  H    +           IQ  +    E+Q   + ++   
Sbjct: 331 LKTHQRLQQLAEYAQQYPHHQHWEKCLPLWREQFRQLHIQHQQSVANEQQLQQQAVLLSS 390

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
           L+       E+     ++  Q   +   +   +  L  +       +            +
Sbjct: 391 LQQQATTLNEQDKQQQVVLAQATLQAGSIQQQLTALEQQQPSTQLRQQLDELQQQRSARQ 450

Query: 448 ILQSFAYKN 456
            L + +   
Sbjct: 451 QLATLSPLA 459


>gi|297295724|ref|XP_002804682.1| PREDICTED: serine/threonine-protein kinase 10-like [Macaca mulatta]
          Length = 923

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 669 TTDNRREICGKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 726

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 727 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 786

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 787 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 846

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 847 VEHETQKLKALD 858


>gi|194893896|ref|XP_001977962.1| GG17951 [Drosophila erecta]
 gi|190649611|gb|EDV46889.1| GG17951 [Drosophila erecta]
          Length = 388

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 7/143 (4%)

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHN--LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L   D  L      L+RL   LE    L   +       + ++ R+       +  + R 
Sbjct: 18  LERLDPLLERVVPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLRERD 77

Query: 372 HILEKQQHIE----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            +      +E    +     L       +E++  L   R+  + R   L   +  L  R+
Sbjct: 78  RLDPLLDRLEPEPLRERLDPLLERLDPLRERLEPLRERRDPLRERADPLRERLDPLRERL 137

Query: 428 EFILSHKIKSCHTSVSITTRILQ 450
           E  L  +++     +      L 
Sbjct: 138 EP-LRERLEPLRERLEPLRERLD 159



 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 36/188 (19%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLI 363
             L+ LL+ L    + L     RLD L   L+  LE +   R+    + +++R++ + L 
Sbjct: 33  ERLDPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLRERDRLDPLLDRLEPEPLR 92

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
             +    + +   ++ +E + ++    R      +E++  L    E  + R+  L   ++
Sbjct: 93  ERLDPLLERLDPLRERLEPLRERRDPLRERADPLRERLDPLRERLEPLRERLEPLRERLE 152

Query: 422 KLITRIE-----------------------------FILSHKIKSCHTSVSITTRIL--- 449
            L  R++                              +L  +++            L   
Sbjct: 153 PLRERLDPDPLRDLLDPEPLRERREPLRDLFERLEPDLLRDRLEPLRERCDPLRDRLDPL 212

Query: 450 -QSFAYKN 456
            +S     
Sbjct: 213 RESLEPLR 220


>gi|332250912|ref|XP_003274593.1| PREDICTED: centrobin [Nomascus leucogenys]
          Length = 819

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +    +            S  + L      L   R    +   +L+ + + +    
Sbjct: 223 EAEQQRCCALQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 282

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 283 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 342

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 343 ESQRIQLESELAVQLEQQVTERLAQAQESSLRQAASLREHHRKQLQDLS 391


>gi|148678540|gb|EDL10487.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_a
           [Mus musculus]
          Length = 793

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +    +  + +E +    +            S  + L      L   R    +   
Sbjct: 209 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 268

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +L+  L+ +               + +       + +  +L+ +    +     +R    
Sbjct: 269 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 328

Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             + +++++    E  + ++         +++  R+     + ++   +      + LQ 
Sbjct: 329 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 388

Query: 452 FA 453
            +
Sbjct: 389 LS 390


>gi|281182792|ref|NP_062079.2| serine/threonine-protein kinase 10 [Rattus norvegicus]
          Length = 980

 Score = 42.8 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 55/207 (26%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +   +   ++           +        
Sbjct: 710 DFVAKQKEDLELAMKKLTAENRREICDKERDCLNKKQELLRDREAALWEMEEHQLQERHQ 769

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 770 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 829

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 830 RMAMYKKSLHINGAGSASEQREKVKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 889

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 890 MNELQQLQNEKCHLLVEHETQKLKALD 916


>gi|315925523|ref|ZP_07921733.1| CMP-binding-factor 1 [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621064|gb|EFV01035.1| CMP-binding-factor 1 [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 319

 Score = 42.8 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 23/106 (21%)

Query: 19  ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF--SLKDNHSR-IDAIIWKGTLNK 75
           +L+   K   ES L ++ ++   S      ++G  YF  +L D+    ++A +W      
Sbjct: 5   QLNQVKKG--ESLLGYLFIK---SQTVKTSTNGSRYFNMTLTDSAFTGMNAKMW------ 53

Query: 76  IEFLP------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115
            +  P       EG    V  K+  +  +   QII+  +  +  G 
Sbjct: 54  -DVKPVDEEEFTEGQLVKVKAKVQEY--NGNLQIIVNRMRLTNEGD 96


>gi|220678338|emb|CAX14364.1| novel protein similar to vertebrate STE20-like kinase (yeast) (SLK)
           [Danio rerio]
          Length = 969

 Score = 42.8 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 3/181 (1%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
               T +   +    V+   +     +E        RL            K L     T 
Sbjct: 627 FEHETTSKKRQYDTEVENMERQQKQTIERLEQEHTERLRDEAKRIKAEQDKELSKFQNTH 686

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
              +       ++ + +L+  + +  +     +   + D L H  Q  R       +  E
Sbjct: 687 KNRKKEEQEFVQKQQQDLDSALKKIIQQHKLELATTERDCLNHKQQLLRAREAAMWELEE 746

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           + +++  +   L K++      M R Q   R       + +   R+   + ++     T 
Sbjct: 747 RHLQEKHQ---LYKQQLKDQYFMQRHQLLKRHEKEMEQMHRYNQRLMEDMKNRQMQEKTR 803

Query: 442 V 442
           +
Sbjct: 804 L 804


>gi|15964288|ref|NP_384641.1| hypothetical protein SMc02230 [Sinorhizobium meliloti 1021]
 gi|15073465|emb|CAC45107.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
          Length = 960

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 7/240 (2%)

Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270
           R  G  + L  F+    DE++  A     I   I+++       + +      A      
Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
                P +  L     +L+ RL+ I   +     N   +    +   +  L     ++D 
Sbjct: 281 GRQIQPDERRLAPQFADLDKRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L   ++  L   I         +     +  L   + +    +               R 
Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVLEH--NRPGAEPDLTDRL 398

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             + +K +      + +    R+  L   I  L   +E     +       ++   + L+
Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458


>gi|268316211|ref|YP_003289930.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252]
 gi|262333745|gb|ACY47542.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252]
          Length = 1185

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 46/163 (28%), Gaps = 15/163 (9%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
              +    N L +L       D+ L  +R   +RL        +            +   
Sbjct: 287 QERLHALQNRLQALDSEGRLLDERLQAARSEQERL--------QREAKEAEHQEQRLRQA 338

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +++          R    E         +   ++   +++E++     L +Q +  +   
Sbjct: 339 LEAAETAVREAMPRHEAAEAALRQALEARDAAQHALEQQRERVREARRLLQQAEQTLHEA 398

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
              + +   R        ++     +    + L +     TL+
Sbjct: 399 RRQLDRQSNR-----RELLEQERERLDAEQKTLDAQ--LQTLE 434



 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 63/206 (30%), Gaps = 30/206 (14%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
                +   +    +  +   RL+  ++    S  + L    +       RL +     E
Sbjct: 284 EAAQERLHALQNRLQALDSEGRLLDERLQAARSEQERLQREAKEAEHQEQRLRQALEAAE 343

Query: 337 HNLEIIIFRKYRHFNHIINRIK-SDFLIHNIQKNRQHILEKQQHIEQIVKQHL--RYIFL 393
             +   + R       +   ++  D   H +++ R+ + E ++ ++Q  +     R    
Sbjct: 344 TAVREAMPRHEAAEAALRQALEARDAAQHALEQQRERVREARRLLQQAEQTLHEARRQLD 403

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLI-----------------TRIEF------- 429
            +  +  +L   RE+       L   ++ L                   R+         
Sbjct: 404 RQSNRRELLEQERERLDAEQKTLDAQLQTLETEQEETLRKRKTARQTCERLRKEIEALEA 463

Query: 430 ---ILSHKIKSCHTSVSITTRILQSF 452
               L  +I + + ++    R L++ 
Sbjct: 464 RRQALRQEIAARNEALHRRERRLEAV 489


>gi|301063318|ref|ZP_07203863.1| HDIG domain protein [delta proteobacterium NaphS2]
 gi|300442615|gb|EFK06835.1| HDIG domain protein [delta proteobacterium NaphS2]
          Length = 334

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            +L D    + A +W      +  L  EG    V G+ +T+    + Q+ I  L PS  
Sbjct: 33  LTLADKTGDLPAKVW-DRAEALSPLFHEGEVVEVTGRSSTY--QGQLQLTISELRPSPE 88


>gi|297284953|ref|XP_001097875.2| PREDICTED: pleckstrin homology-like domain family B member 2-like
           [Macaca mulatta]
          Length = 1253

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453
           +  L++Q  + +          +     ++   ++    ++    +   S +        
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823

Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512
             NTLK GY    +  N       NL+        F  D  A+A+    A        + 
Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVAAEPATAVLASQPQS 875

Query: 513 QLHNNKREKQGTQ 525
           + H    E++  Q
Sbjct: 876 KEHFRSLEERKKQ 888


>gi|119718880|ref|YP_925845.1| single-strand binding protein [Nocardioides sp. JS614]
 gi|119539541|gb|ABL84158.1| single-strand binding protein [Nocardioides sp. JS614]
          Length = 188

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109
           KD  +  +   +W+     +    + G+  +V G++   T+        + ++I +E + 
Sbjct: 48  KDGDALFLSCSVWRQAAENVAESLQRGMRVVVQGRLKSRTYETREGEKRTVFEIEVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|312200637|ref|YP_004020698.1| single-strand binding protein [Frankia sp. EuI1c]
 gi|311231973|gb|ADP84828.1| single-strand binding protein [Frankia sp. EuI1c]
          Length = 141

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSS----KYQIIIESLIPS 111
           +   IW+     +     +G+  +V G++   ++         +++ ++ + PS
Sbjct: 55  LRCSIWRQPAEHVADSLAKGMRVIVTGRLRQRSYEKDGVKRTAFELDVDEIGPS 108


>gi|124806285|ref|XP_001350680.1| NIMA-related protein kinase, Pfnek-1 [Plasmodium falciparum 3D7]
 gi|23496806|gb|AAN36360.1| NIMA-related protein kinase, Pfnek-1 [Plasmodium falciparum 3D7]
          Length = 1057

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/280 (9%), Positives = 81/280 (28%), Gaps = 16/280 (5%)

Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237
           P+  + +   +         N   +       D++I  R           + + ++ AI+
Sbjct: 304 PILSKKEHGTELTNIDSCTSNMDNKHNYAHPNDVLINKRNNERERSSSCLSRQSVITAIS 363

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
             ++      G      + +                A    +           +      
Sbjct: 364 KDNVKYHPPDGTNNSHLINN---GKYTNNSRVGGVHADGPTKMYHIETDRFNEKEKMKRE 420

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
              + +       +K L          R + +R+ RE +  +E I   + +         
Sbjct: 421 IYERERSQRKAFEMKLLEKK----RLEREKKERVEREKKGKMERIERERMQRLERERLER 476

Query: 358 KSDFLIHNIQKNRQHILEKQQ-------HIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
                +  ++K R   LEK++        ++++ K  L  +  ++ +++    + R + +
Sbjct: 477 LEKERLDRLEKERLDRLEKERLDRLEKDRLDRLEKDRLDRLEKDRLDRLEKDRLDRLEKE 536

Query: 411 NRIFYLHTHIKKLIT-RIEFILSHKIKSC-HTSVSITTRI 448
                    + +    R++ +   ++            R+
Sbjct: 537 RLERLEKERLDRFEKERLDRLGKERLDRLGKERFERMDRL 576


>gi|222480812|ref|YP_002567049.1| phosphoesterase RecJ domain protein [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453714|gb|ACM57979.1| phosphoesterase RecJ domain protein [Halorubrum lacusprofundi ATCC
           49239]
          Length = 648

 Score = 42.8 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 35  VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           V V GE+       + G   F++ D    +    ++    +     E G    V G + T
Sbjct: 137 VTVEGEVVQ--AKQTGGPTIFAVADASGVVSCAAFEEAGVRAYPEVEVGDMVHVSGTVET 194

Query: 95  FPGSSKYQIIIESLIPSGSGTLLTALEK 122
                  Q+ ++SL     G    A E+
Sbjct: 195 REN--ALQLEVDSLKRLPEGRAAEARER 220


>gi|26331630|dbj|BAC29545.1| unnamed protein product [Mus musculus]
 gi|35193227|gb|AAH58512.1| Cntrob protein [Mus musculus]
          Length = 662

 Score = 42.8 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +    +  + +E +    +            S  + L      L   R    +   
Sbjct: 78  ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 137

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +L+  L+ +               + +       + +  +L+ +    +     +R    
Sbjct: 138 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 197

Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             + +++++    E  + ++         +++  R+     + ++   +      + LQ 
Sbjct: 198 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 257

Query: 452 FA 453
            +
Sbjct: 258 LS 259


>gi|87124553|ref|ZP_01080402.1| RecF protein:ABC transporter [Synechococcus sp. RS9917]
 gi|86168125|gb|EAQ69383.1| RecF protein:ABC transporter [Synechococcus sp. RS9917]
          Length = 898

 Score = 42.4 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 69/226 (30%), Gaps = 18/226 (7%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELE 336
           + L   +  +E +    +   I+ +   ++ L     L    + L   R  L RL  E  
Sbjct: 240 DQLVQQIDTIERQQLPALQGRIRSQKQRISLLQSLEPLRLRREPLERQRGSLQRLETEAR 299

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI-FLEK 395
              E  +              ++       + + Q + +++Q +EQ  +   R       
Sbjct: 300 SQAERQVQLDLALERLQQENDQAVQTCRQQRTDLQALEQQRQALEQRGQTLRRLEERAGL 359

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSVSIT-------- 445
           +++   L + R   +          +KL     +       ++    ++           
Sbjct: 360 EQRCRELEIRRTTVQALQRQRQQLQEKLRRCRSLSAAEHEALQEQRQALEALRIRREAMA 419

Query: 446 --TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489
              R+L++ +       G  ++Q      ++Q   L     + +  
Sbjct: 420 TRVRLLRASSPVAL---GGAALQVGEERLLSQPFGLTVGEGVELEL 462


>gi|18978227|ref|NP_579584.1| putative transcription-associated protein TFIIS [Pyrococcus
           furiosus DSM 3638]
 gi|18894042|gb|AAL81979.1| putative transcription-associated protein TFIIS [Pyrococcus
           furiosus DSM 3638]
          Length = 424

 Score = 42.4 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 20  LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTL 73
           +   +K +      +V +RG+++G +      H +F L+D   +I          ++  +
Sbjct: 255 VVKKIKDV--KPYDNVVIRGKVAG-KYWEKGRHVFFELEDETGKIRVAAFEPTKKFRNYV 311

Query: 74  NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            K+      G E ++ G +  F       + +E   P     L+  +E  K +  +
Sbjct: 312 RKLLP----GDEVIIAGGVKEFE--GVLTVNLEKFYPV---NLVPKVEYEKPRCPK 358


>gi|164660680|ref|XP_001731463.1| hypothetical protein MGL_1646 [Malassezia globosa CBS 7966]
 gi|159105363|gb|EDP44249.1| hypothetical protein MGL_1646 [Malassezia globosa CBS 7966]
          Length = 879

 Score = 42.4 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/261 (8%), Positives = 77/261 (29%), Gaps = 30/261 (11%)

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           IGH     + D A++                 + + +      A +     R ++++   
Sbjct: 574 IGHLHRDRITDTASEAEHQHLQHTIRTLRAQLQGINARFDRQRAEMQAANARHMQWEREL 633

Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI- 363
               +  +    +      +  R     R +  +   +I           + +       
Sbjct: 634 NAKLNSYRDERRAWTVRVQNLERELEQARRMTKSQADVISSMGARLFTAQSDLAMAAPKL 693

Query: 364 ----------HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-EQTKNR 412
                     H ++ +     +K   ++Q  ++  + +   +  ++A+++  R  +  ++
Sbjct: 694 ARLQRYDASVHRLEGSLSEWEDKLTILDQQREEMNKLLLRFRGMELAVVNSERSARQHSQ 753

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT-RILQSFA-YKNTLKRGYTSIQDTNN 470
           +    +   + + R    L  K+   H  V     + L++ +  +         +   + 
Sbjct: 754 LAESLSFENEQLQRDLHALRTKLLQQHERVQALEEQRLRALSTPQ---------VSMDDV 804

Query: 471 NFITQKRNLATKTRILINFFD 491
             +          ++ +   D
Sbjct: 805 RALRS-----KNEQLELELLD 820


>gi|158296271|ref|XP_001688950.1| AGAP006661-PA [Anopheles gambiae str. PEST]
 gi|157016431|gb|EDO63956.1| AGAP006661-PA [Anopheles gambiae str. PEST]
          Length = 640

 Score = 42.4 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 55/149 (36%), Gaps = 8/149 (5%)

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN--RIKSDFLIHNIQK 368
               P  ++TL     +L  +  E +  L+  + ++       ++  ++  + L   I K
Sbjct: 465 CSNYPELERTLRALEQQLTAVFAEYQ-ALQQRLSQQKMRLEQQVSDEQLTIEPLETKIAK 523

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFL-----EKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             + + + QQ  E +V++ +            +++   L    EQ   ++      I KL
Sbjct: 524 QTERLQQLQQRRETVVRELVALAERANERGTLEQRTKELDQRIEQAMEQMESNRKAIVKL 583

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452
               + ++   ++ C  ++    + L   
Sbjct: 584 TYDKQQLMEDGLERCRQALEERHQKLADL 612


>gi|220935761|ref|YP_002514660.1| trypsin family protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997071|gb|ACL73673.1| trypsin family protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 344

 Score = 42.4 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 456 NTLKR-GYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKE 506
            T++R G   +   +   +T    + +  +I ++F DG   +A VI   P  +
Sbjct: 54  RTIQRVGSGVLVSGDGRIVTAAHVVQSADQIQVSFADGSTVDARVIGSEPAAD 106


>gi|119945049|ref|YP_942729.1| SMC domain-containing protein [Psychromonas ingrahamii 37]
 gi|119863653|gb|ABM03130.1| SMC domain protein [Psychromonas ingrahamii 37]
          Length = 1234

 Score = 42.4 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 9/209 (4%)

Query: 255 LADYAADLRAPTP-TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           L+D    L+   P      +  P   + Q   I       ++  + ++      +     
Sbjct: 590 LSDLKKHLQKDNPCPLCGSIEHPSVSNYQPVDIPETQIALSLQEQRLESIREQYSDAKNR 649

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQ 371
           +    + L+  R +   L + LE  L       Y         +      L  ++++ R 
Sbjct: 650 IKTDTRQLAEYRLQAANLSQLLEKQLTEWQDSPYLSAFTYQQSSFADLSLLTQSLREKRF 709

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
           +I   Q+ I+QI  Q      + +   +       ++   ++   H        R+    
Sbjct: 710 NIENLQKQIQQIDAQLPDLREVMQA--LTQKANDHDRLLQQLNNQHAVADNEDQRLAKEQ 767

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKR 460
              +     +     + L        LK+
Sbjct: 768 QMLLAQLEENQQGICQQL----PAELLKK 792


>gi|189204800|ref|XP_001938735.1| SH3 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985834|gb|EDU51322.1| SH3 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1508

 Score = 42.4 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 54/176 (30%), Gaps = 7/176 (3%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           ++ D+           A P +++ Q      E +      R    +        +     
Sbjct: 413 HSIDMSRQPVELPPPQAEPPRQYEQHRQYAEEPQQYMEEARYYPEEPQQYMEEPRQYVEP 472

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
            Q       +    P++        +    +    +   ++      ++++ RQHI + +
Sbjct: 473 PQQYVEPPQQYMEPPQQYMEEPRQYVEPPQQQAEPLRQHVEQ--PRKSVEQMRQHIEQPR 530

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
           Q ++ +     R     ++++I  L    E  +  +  L    +    RIE     
Sbjct: 531 QQVQPL-----RQHVEPQQQRIEPLRQHTEPPRQHVEPLRQQPEPRRQRIEPSRQQ 581



 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
            +      + ++     +    + +    Q +   R  ++   ++ E  L   + +  + 
Sbjct: 460 QQYMEEPRQYVEPPQQYVEPPQQYMEPPQQYMEEPRQYVEPPQQQAEP-LRQHVEQPRKS 518

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
              +   I+       +Q  RQH+  +QQ IE +     R      ++ +  L    E  
Sbjct: 519 VEQMRQHIEQ--PRQQVQPLRQHVEPQQQRIEPL-----RQHTEPPRQHVEPLRQQPEPR 571

Query: 410 KNRIFYLHTHIKKLI 424
           + RI       +   
Sbjct: 572 RQRIEPSRQQSEPQR 586


>gi|124022037|ref|YP_001016344.1| hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT
            9303]
 gi|123962323|gb|ABM77079.1| Hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT
            9303]
          Length = 1184

 Score = 42.4 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 66/226 (29%), Gaps = 17/226 (7%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
               ++    +           +      +    ++    + N  Q L  +++ L+RL ++
Sbjct: 874  WRDQQQELQARRQTLESQQQDLQTRFGEQRRARDAAEAEVANQRQGLQEAQWNLERLRQD 933

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH------- 387
                L   +         +   +         +     +   Q  ++QI  +        
Sbjct: 934  -RQALAEELRSGGLRLKELQQALPDPPPEIPAELRSAGLEALQADLQQIQSRMEALEPVN 992

Query: 388  ---------LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
                     L     +  E++ +L   RE+   RI  + T  ++        +    +  
Sbjct: 993  MLALEELEQLEQRLGDLVERLEVLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFRDI 1052

Query: 439  HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
              S+S     LQ     + L+ G T +       + +   ++   +
Sbjct: 1053 FASLSEGDGHLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1098



 Score = 39.4 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 49/168 (29%), Gaps = 3/168 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              +        +        L    K   +++  +  SR RL  +       LE    R
Sbjct: 334 NRRKQLQQEAHSQTEDPHRTALEDAEKTCRDAEAAVEVSRRRLGDVAGRSGAWLEQQRQR 393

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
             R    + + +          + R     +++   +  +Q       + ++++  L   
Sbjct: 394 SSRR-QELQSTLTPLQQEQQQLQERLRQDGERRVELEAEQQRDGTEDQQVQKQLDQLEQE 452

Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451
            +     I      +++    +  +     +++   T +      L+S
Sbjct: 453 WQALLQNISDKKEQVQQAAESLAVQQRTRSRLEQEQTRLEKEIARLES 500


>gi|296812345|ref|XP_002846510.1| cell division control protein 3 [Arthroderma otae CBS 113480]
 gi|238841766|gb|EEQ31428.1| cell division control protein 3 [Arthroderma otae CBS 113480]
          Length = 518

 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/317 (10%), Positives = 95/317 (29%), Gaps = 29/317 (9%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 210 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 269

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q +   +    PR ++  
Sbjct: 270 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQRHHSIQIFEGPRYEL-- 327

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
                   E+    N E++     A+  ++  + +  G +       W +   D      
Sbjct: 328 ------DDEETIAENKEIMSKVPFAVVGANSEVTNNEGRKVRGRRYPWGVIEVDNEEHCD 381

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 382 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 441

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K        + + +    +   + + RQ + EK+  +E
Sbjct: 442 HEQKLAKMESEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 501

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 502 SGRPLEDKIKRKGFSLR 518


>gi|258538319|ref|YP_003172818.1| ABC transporter permease [Lactobacillus rhamnosus Lc 705]
 gi|257149995|emb|CAR88967.1| ABC transporter permease protein [Lactobacillus rhamnosus Lc 705]
          Length = 1101

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/176 (6%), Positives = 45/176 (25%), Gaps = 2/176 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPREL 335
               +         +L+    +      +   +L K L +     L+  + +  +     
Sbjct: 205 DFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNKRLKDAPTDRLAAIKKQYQKKIDAG 264

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +  L+    +       +    +           +Q  L+      Q           + 
Sbjct: 265 QKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQELDTAVKNGQAQIASGEAQLQQA 324

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             +++         K ++      +      +      ++ + +  ++ +   L +
Sbjct: 325 ATQLSQSESQLASAKQQLEASQQQLDAKQQDLASA-KQQLDTANQQLANSQAQLAA 379


>gi|229550969|ref|ZP_04439694.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
           rhamnosus LMS2-1]
 gi|229315661|gb|EEN81634.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
           rhamnosus LMS2-1]
          Length = 1097

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/176 (6%), Positives = 45/176 (25%), Gaps = 2/176 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPREL 335
               +         +L+    +      +   +L K L +     L+  + +  +     
Sbjct: 201 DFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNKRLKDAPTDRLAAIKKQYQKKIDAG 260

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +  L+    +       +    +           +Q  L+      Q           + 
Sbjct: 261 QKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQELDTAVKNGQAQIASGEAQLQQA 320

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             +++         K ++      +      +      ++ + +  ++ +   L +
Sbjct: 321 ATQLSQSESQLASAKQQLEASQQQLDAKQQDLASA-KQQLDTANQQLANSQAQLAA 375


>gi|332306123|ref|YP_004433974.1| chromosome segregation protein SMC [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173452|gb|AEE22706.1| chromosome segregation protein SMC [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 1164

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/147 (9%), Positives = 44/147 (29%), Gaps = 4/147 (2%)

Query: 307 LNSLLKALPNSDQTLSCS---RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
             +++  L +    +        R +   ++    L     +     +   + +      
Sbjct: 654 RANMISTLESKLPAIQQQCDTAQRSNEQAQQNVERLNQSKEQAQSTLSRCSDALSQKKNH 713

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
                 +Q    ++    Q+  Q  + I L+++  +A      E+    +  L      +
Sbjct: 714 AQWLTQQQQTNAQRSQKLQVELQKQQEILLKEQADLAETTAQTEELAETLLGLEDQQTDI 773

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQ 450
             +    L+++++     V      L 
Sbjct: 774 EKQ-REALNNQLREQRHQVDNLKAQLH 799


>gi|80861396|ref|NP_001032221.1| centrobin isoform beta [Homo sapiens]
 gi|37724707|gb|AAO22136.1| centrobin beta [Homo sapiens]
          Length = 925

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|33863851|ref|NP_895411.1| SMC ATPase superfamily chromosome segregation protein
            [Prochlorococcus marinus str. MIT 9313]
 gi|33635434|emb|CAE21759.1| putative chromosome segregation protein, SMC ATPase superfamily
            [Prochlorococcus marinus str. MIT 9313]
          Length = 1202

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 68/226 (30%), Gaps = 17/226 (7%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
               ++    +           +      +    ++    + N  Q L  +++ L+RL ++
Sbjct: 892  WRDQQQELQARRQTLESQQQDLQTRFGEQRRARDAAEAEVANQRQGLQEAQWNLERLRQD 951

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIF 392
                L   +       N +   +         +     +   Q  ++  Q   + L  + 
Sbjct: 952  -RQALTEELRSGGLRLNELQQALPDPPPEIPAELRSAGLEALQADLQKLQSRMEALEPVN 1010

Query: 393  LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---- 448
            +   E++  L         R+  L    ++L+ RIE + + + ++   +           
Sbjct: 1011 MLALEELEQLEQRLGDLVKRLEVLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFRDI 1070

Query: 449  ----------LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                      LQ     + L+ G T +       + +   ++   +
Sbjct: 1071 FASLSEGDGHLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1116



 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 50/168 (29%), Gaps = 3/168 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              +        +        L    K   +++  +  SR RL  +       LE    R
Sbjct: 352 NRRKQLQQEAHSQTEDPHRTALEDAEKNCRDAEAAVEVSRRRLGDVAGRSGAWLEQQRQR 411

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
             R    + + +          + R    E+++   +  +Q       + ++++  L   
Sbjct: 412 SSRR-QELQSTLTPLQQEQQQLQERLRQDEERRVELEAEQQRDGTEDQQVQKQLDQLEQE 470

Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451
            +     I      +++    +  +     +++   T +      L+S
Sbjct: 471 WQTLLQSISDKKEQVQQAAEALAVQQRTRSRLEQEQTRLEKEIARLES 518


>gi|16329834|ref|NP_440562.1| DNA polymerase III subunit alpha [Synechocystis sp. PCC 6803]
 gi|1652319|dbj|BAA17242.1| DNA polymerase III alpha subunit [Synechocystis sp. PCC 6803]
          Length = 458

 Score = 42.0 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           + +L+D   + +A+++     +++ +  EG + ++ GK+       +YQ+I+E L P 
Sbjct: 310 FLTLEDMSGQSEAVVFPSNYERLQDVLIEGSQQMIWGKVD--RRDDQYQLIVEDLEPV 365


>gi|167517193|ref|XP_001742937.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778036|gb|EDQ91651.1| predicted protein [Monosiga brevicollis MX1]
          Length = 700

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 57/195 (29%), Gaps = 28/195 (14%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           +    +       L   +  L K +     ++ +   ++ +  S  R R + L       
Sbjct: 78  QSRLQAAEKENQELRRELKLLEKIQRRQTKAIDQYEGSNSELPSQLRQREEEL------- 130

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
               +  + R+       +++        K+ Q + +K + +E +VK           E+
Sbjct: 131 --RALREQMRNLKARNTELEASH--QKKDKHMQQVRDKARRLESLVKDKDLLEAATATER 186

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFI-----------------LSHKIKSCHTS 441
           +  L    +     +  L  H   L  ++                    L  +I+     
Sbjct: 187 VHQLEQELQTKNEAVSKLQHHCDLLQKQLARAEASQGKQVSQVKGEVSHLERRIEELEDK 246

Query: 442 VSITTRILQSFAYKN 456
           ++   R L+      
Sbjct: 247 LAARDRQLEKLNILA 261


>gi|300797921|ref|NP_001179556.1| serine/threonine-protein kinase 10 [Bos taurus]
 gi|297487538|ref|XP_002696297.1| PREDICTED: serine/threonine kinase 10 [Bos taurus]
 gi|296475893|gb|DAA18008.1| serine/threonine kinase 10 [Bos taurus]
          Length = 967

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +  + ++ +   + L+K            R+ L R   
Sbjct: 719 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELLRKHE 776

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 777 KEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGGSAAEQRE 836

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  +   T+ 
Sbjct: 837 KIKQFSQQEEKRQKAERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLLIEHETQK 896

Query: 449 LQSFA 453
           L++  
Sbjct: 897 LKALD 901


>gi|195040128|ref|XP_001991006.1| GH12443 [Drosophila grimshawi]
 gi|193900764|gb|EDV99630.1| GH12443 [Drosophila grimshawi]
          Length = 1053

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 8/172 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +  V      +    N E     + +     K     +L     N  Q  +    R+ +
Sbjct: 671 GDRKVFDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 730

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++          R+     H    ++   L   + K +Q + +    +   +K H + 
Sbjct: 731 AQKQYIELEMRKFKRRRMTHQH---DLEDHLLRDELSKKQQQLEQAHAML---LKHHEKT 784

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440
             LE +++ ++  +  EQ   +      + +  + RI+  L  K  ++    
Sbjct: 785 QELEYRQQKSVHQLREEQINKQHDTEFHNQEDYMDRIKKDLQRKHALELRQQ 836


>gi|256389566|ref|YP_003111130.1| single-strand binding protein [Catenulispora acidiphila DSM 44928]
 gi|256355792|gb|ACU69289.1| single-strand binding protein [Catenulispora acidiphila DSM 44928]
          Length = 219

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109
           KD  +  +   IW+     +      G+  +V G++   ++        +  ++ +E + 
Sbjct: 48  KDGDALFLRCSIWRQAAENVAESLTRGMRVIVSGRLRQRSYETKEGEKRTVVELDVEEIG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|317139349|ref|XP_001817449.2| cell division control protein 3 [Aspergillus oryzae RIB40]
          Length = 461

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E      
Sbjct: 189 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 248

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 249 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 306

Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                      D                    +    ++    E   ++ + ++   +  
Sbjct: 307 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 366

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 367 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 426

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 427 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 461


>gi|222528287|ref|YP_002572169.1| hypothetical protein Athe_0246 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455134|gb|ACM59396.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 212

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 6/87 (6%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++ +Q +   ++ ++++ ++  R      +E++  +    ++ + R+  +   +  +  
Sbjct: 22  LEEVKQRLDRVEERLDRVEERLDR-----VEERLDRVEERLDRVEERLDRVEKRLDAVEK 76

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSF 452
           R++  +  ++ +    +    + L + 
Sbjct: 77  RLD-AVEQRLDAVEQRLDAVEQRLDTL 102


>gi|157273447|gb|ABV27346.1| DNA polymerase III alpha subunit [Candidatus Chloracidobacterium
           thermophilum]
          Length = 445

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 35  VCVRGEISGYRGIH-SSGHAY--FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
           V + G +S +   +   G  +  F+L+D    I+ I W  T  +      +G   LV G+
Sbjct: 282 VRMGGIVSNFVVKNTKKGDRFAVFTLEDETGSIEVIAWPETFRRFGEQVTDGAAVLVTGR 341

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           +    G    +II E+  P  +G      +    +   + L
Sbjct: 342 VEVEAGKPT-KIIAEAAEPL-AGIRERHAKGIILRFPADSL 380


>gi|238482571|ref|XP_002372524.1| septin AspB [Aspergillus flavus NRRL3357]
 gi|220700574|gb|EED56912.1| septin AspB [Aspergillus flavus NRRL3357]
          Length = 523

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E      
Sbjct: 251 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 310

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 311 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 368

Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                      D                    +    ++    E   ++ + ++   +  
Sbjct: 369 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 428

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 429 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 488

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 489 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 523


>gi|47224891|emb|CAG06461.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 929

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 48/173 (27%), Gaps = 6/173 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            KE L+     ++      I  +         S            +      DRL  E  
Sbjct: 437 EKEQLRLRWDRMQMSNFTCITNITHTSQLREESEGLLKQLRTSLEAERAEERDRLEAEKR 496

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             +E +        +   + + S      +Q  ++ +          ++        + K
Sbjct: 497 QEMERLKKESELESSQRKSWLSS------LQDEKERLQAAHSEQLGKLRLQFDKQMEQMK 550

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
            + +      +Q   +I      ++    R++    H+++     +    + L
Sbjct: 551 LEHSRRESKLQQVAEQIKLRAKELETQEARLQTKAFHRLRLERDLLKEELQRL 603


>gi|88807230|ref|ZP_01122742.1| putative chromosome segregation protein, SMC ATPase superfamily
            protein [Synechococcus sp. WH 7805]
 gi|88788444|gb|EAR19599.1| putative chromosome segregation protein, SMC ATPase superfamily
            protein [Synechococcus sp. WH 7805]
          Length = 1183

 Score = 42.0 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 17/226 (7%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
               +    +   +        +      +    +    ++    Q L  +R+ L+RL  E
Sbjct: 873  WRQQHQDLNRRRDALNAQQQDLQTRFGEERRARDEAEASVAEQRQGLQQARWELERLREE 932

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFL----------------IHNIQKNRQHILEKQQ 378
                LE  +       + + + +                          + R   LE   
Sbjct: 933  -RIGLEEQLRSGSMRLDELKSSLPDPLPEISDAVRDGGLEALQEQLQQLQRRMEALEPVN 991

Query: 379  HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
             +     Q L     +  E++ +L   RE+   RI  + T  ++        +    +  
Sbjct: 992  MLALEELQELEQRLGDLGERLELLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFREI 1051

Query: 439  HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
              S+S     LQ    ++ L+ G T +       + +   ++   +
Sbjct: 1052 FASLSDGDGKLQLDNPEDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1097


>gi|313108400|ref|ZP_07794416.1| hypothetical protein PA39016_001340017 [Pseudomonas aeruginosa
           39016]
 gi|310880918|gb|EFQ39512.1| hypothetical protein PA39016_001340017 [Pseudomonas aeruginosa
           39016]
          Length = 455

 Score = 42.0 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/220 (9%), Positives = 55/220 (25%), Gaps = 19/220 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
              +  A       +MA   + +         A       +  +        + +     
Sbjct: 135 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAAPAEPPRKQEDEQAARLAQLVKQQRQQL 194

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    RL  L R+ E  L           + + + +    L   +++  +   E Q
Sbjct: 195 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 252

Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422
           Q + +  +Q  R      ++               +      L  +    +      +  
Sbjct: 253 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAVAVAGYKEQVSI 312

Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     L  +++     +      L +   +  L+R
Sbjct: 313 RDVELAYRNELDQQLEQELAELRAERDRLAALGPEQLLER 352


>gi|297563758|ref|YP_003682732.1| single-strand binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848206|gb|ADH70226.1| single-strand binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 195

 Score = 42.0 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 12/72 (16%)

Query: 48  HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSS 99
            +SG      KD  S  +   +W+     +    + G+  +V G++   ++        +
Sbjct: 42  RASGEW----KDGESMFLTCTVWRQYAENVAESLQRGMRVIVQGRLKQRSYETREGEKRT 97

Query: 100 KYQIIIESLIPS 111
            ++I ++ + P+
Sbjct: 98  VFEIDVDEVGPA 109


>gi|115449333|ref|XP_001218580.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114187529|gb|EAU29229.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 340

 Score = 42.0 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 68/238 (28%), Gaps = 3/238 (1%)

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
               L       IV+    ++I  ++A G+    T+   A                  + 
Sbjct: 20  GYHGLCLLCVLFIVQVALGTTITALAAKGYHPMSTITALAGTNTGVVALVIVLQPFYQRR 79

Query: 280 HLQSSLINLEA--RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
               +  + E+       I  L ++    + SL   L    ++L     R  +     ++
Sbjct: 80  KENKNQRDEESVLPGWAEIDSLERHLGAQICSLKLHLSAQMESLERHLRRQFQRHPNGQN 139

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
           N     ++                L H     +  +  +  H++++++  +       + 
Sbjct: 140 NNPREKYKNKADNILEHIEDFKQDLQHQFDIYQHDLGAQLHHLKKVLQVKIGTFEQGIRA 199

Query: 398 KIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
           +I       ++   N    L   I     R++  +S  ++     +      +     
Sbjct: 200 QIHNSQYNLQEPIYNDQQELWVRIIPFKKRLQETISQVLQRQIHVLQDIRAQIDGIQP 257


>gi|228476930|ref|ZP_04061575.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           salivarius SK126]
 gi|228251504|gb|EEK10649.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           salivarius SK126]
          Length = 741

 Score = 42.0 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 5   SQKNSLDH-PEYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HA 53
           S KN+L+   E  +SELS   +K +       +++      +R   ++  R +  +G H 
Sbjct: 451 SAKNTLNLDEELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLRDITVTQARTMGQNGAHL 510

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            F +K      D + +       EF   +G+E  V   +  + G +  Q+++E     G 
Sbjct: 511 KFKVKQGKDSFDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570


>gi|86607501|ref|YP_476264.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab]
 gi|86556043|gb|ABD01001.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab]
          Length = 1180

 Score = 42.0 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 5/169 (2%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII--IFR 345
              +         + +   L  L  +L          + RL ++    +   + +  + R
Sbjct: 730 QAQQYLERHQADCQNQQARLQHLQGSLAQWQSESQQIQERLHQIQLRWDPLQQRLADLAR 789

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILH 403
           K               L   +Q+   H+ E Q H+  + +Q    +  +  K+ +I    
Sbjct: 790 KLSQLEGSPVNQHWQQLQQAVQQQESHLAELQHHLAHLERQQQENLSQQHLKQAQIQHHQ 849

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
              ++ + R   L   I +    +   +   I      +      L   
Sbjct: 850 ERLQEGERRQAQLQEQIAQAQATLAH-IQQHIAEQRQQMGQIEARLAHL 897



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/208 (10%), Positives = 62/208 (29%), Gaps = 2/208 (0%)

Query: 279  EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
            +  Q   I              ++++      L+ L          +   + +  +L+  
Sbjct: 883  QRQQMGQIEARLAHLRQERERQEFQLRAQQQQLQRLEWERYHALTQQQEKEAILAQLQAQ 942

Query: 339  LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKK 396
            L+            +   +  D L    +K  + +   +    +     + ++    +  
Sbjct: 943  LQAAAQELPDPLPPLPPHLTLDELQRQKRKIEEQLRSLEPVNMLAIAEYEQIQARLGDLN 1002

Query: 397  EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             K+  LH  R +   RI    T  ++        ++   ++    +S     L+    ++
Sbjct: 1003 AKLETLHQERTELLLRIENFSTLRRQAFLDAFHAINGHFQTIFAQLSEGEGYLELENPED 1062

Query: 457  TLKRGYTSIQDTNNNFITQKRNLATKTR 484
             L  G T +       + +   ++   +
Sbjct: 1063 PLAGGLTLVARPKGKPVRRLSAMSGGEK 1090


>gi|254167904|ref|ZP_04874753.1| conserved domain protein [Aciduliprofundum boonei T469]
 gi|197623195|gb|EDY35761.1| conserved domain protein [Aciduliprofundum boonei T469]
          Length = 439

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75
             +K +      +V +RG++         GHA F ++D+  +ID         ++ T+NK
Sbjct: 271 RRIKEV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 328

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
           ++     G E  V G +          I IE + 
Sbjct: 329 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 354


>gi|332847244|ref|XP_523825.3| PREDICTED: centrobin [Pan troglodytes]
          Length = 903

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|119610513|gb|EAW90107.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_d
           [Homo sapiens]
 gi|261858904|dbj|BAI45974.1| centrobin, centrosomal BRCA2 interacting protein [synthetic
           construct]
          Length = 903

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|21887052|gb|AAL56068.2|AF331638_1 PP1221 [Homo sapiens]
          Length = 903

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|191252785|ref|NP_444279.2| centrobin isoform alpha [Homo sapiens]
 gi|74728485|sp|Q8N137|CNTRB_HUMAN RecName: Full=Centrobin; AltName: Full=Centrosomal
           BRCA2-interacting protein; AltName:
           Full=LYST-interacting protein 8
 gi|21594796|gb|AAH21134.1| Centrobin, centrosomal BRCA2 interacting protein [Homo sapiens]
 gi|21739441|emb|CAD38763.1| hypothetical protein [Homo sapiens]
 gi|37724705|gb|AAO22135.1| centrobin alpha [Homo sapiens]
 gi|123982446|gb|ABM82964.1| centrobin, centrosomal BRCA2 interacting protein [synthetic
           construct]
 gi|123997107|gb|ABM86155.1| centrobin, centrosomal BRCA2 interacting protein [synthetic
           construct]
          Length = 903

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|83749426|ref|ZP_00946419.1| Hypothetical Protein RRSL_00453 [Ralstonia solanacearum UW551]
 gi|207738950|ref|YP_002257343.1| hypothetical protein RSIPO_03645 [Ralstonia solanacearum IPO1609]
 gi|83723906|gb|EAP71091.1| Hypothetical Protein RRSL_00453 [Ralstonia solanacearum UW551]
 gi|206592321|emb|CAQ59227.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 698

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D                   + +        L   +   +              L    
Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSAGLLEGVAARLDTTASRMSQAWTEALSQQD 399

Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            ++  L+    R                   L +        +  R  +      + + S
Sbjct: 400 QANAQLTGQHQRALEAATATFEQHAATLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459

Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
               L     +        QQ     + +              + IA L  L +      
Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAELSRLVQAASEAP 519

Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
                 + +L  ++   +      ++     ++    +L +  + +T +R        + 
Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574

Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502
              T    L    R+   F D         G A A V   A
Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612


>gi|194766886|ref|XP_001965555.1| GF22554 [Drosophila ananassae]
 gi|190619546|gb|EDV35070.1| GF22554 [Drosophila ananassae]
          Length = 2609

 Score = 42.0 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 68/195 (34%), Gaps = 17/195 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
               K   +   ++ +    +     +  K+  L+     L   +Q LS    +L +  ++
Sbjct: 1167 QQEKLSEKQQKLSEQQEKLSEQEEKLSEKVQKLSEQETKLSEQEQKLSEQEQKLSQQEKK 1226

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQK----------------NRQHILEKQ 377
            +    E +I ++ +H   I N        IH ++K                NR+   +  
Sbjct: 1227 ISEQEEQLIRKEEKHLEEIKNMKADCSGSIHQLEKEHWKQVQGLQEELAETNREMCKQLS 1286

Query: 378  QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             H +++ +   + + + + E++   +      +  +      +++ + R + +   +I  
Sbjct: 1287 DHAQEMRQLQQKAVDIHRLEELKTANAEMVAERKDMEVQLKQLEEEMKREKQLAQQEIDQ 1346

Query: 438  CHTSVSITTRILQSF 452
                +  +   + + 
Sbjct: 1347 LKARLRESEEQMDAL 1361



 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 46/176 (26%), Gaps = 10/176 (5%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338
              +LE     +I +  K          + L          +     L  +L        
Sbjct: 550 QNSDLERSSAEMIQKYEKELQAVKEHCERELQEQKHCHEAIQRHDKELREKLAEADDHLE 609

Query: 339 -LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
            ++  +  K   F  +   +K     +   + R   L  QQ + +      +   + K  
Sbjct: 610 KMKQQLVEKEEQFAQLGRNLKVICEKNKDLECRAARLHNQQELVRAKYLQCQQQLVAKTT 669

Query: 398 KIAILHMLREQTKNRIFYLH-THIKKLITRI---EFILSHKIKSCHTSVSITTRIL 449
            I+ L    +             + +   R+      L  ++      +    + L
Sbjct: 670 DISQLADNLDTADWDSTLARIDEVIEARNRLIAENSALQSELLQNRERIQTAEQRL 725


>gi|109113169|ref|XP_001111510.1| PREDICTED: centrobin-like isoform 1 [Macaca mulatta]
          Length = 923

 Score = 42.0 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +    +            S  + L      +   R    +   +L+ + + +    
Sbjct: 319 EAEQQRCCALQEERDAARAGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQALQEEN 378

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 379 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 438

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 439 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 487


>gi|284034856|ref|YP_003384787.1| single-strand binding protein [Kribbella flavida DSM 17836]
 gi|283814149|gb|ADB35988.1| single-strand binding protein [Kribbella flavida DSM 17836]
          Length = 192

 Score = 42.0 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 7/70 (10%)

Query: 48  HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQII 104
             SG      KD  S  +   +W+     +    + G+  +V G++   T+      +  
Sbjct: 42  RQSGEW----KDGESLFLSCAVWRQAAENVAESLQRGMRVIVQGRLKSRTYDDREGNKRT 97

Query: 105 IESLIPSGSG 114
           +  +     G
Sbjct: 98  VFEIDVDEVG 107


>gi|301788063|ref|XP_002929452.1| PREDICTED: peripheral-type benzodiazepine receptor-associated
           protein 1-like [Ailuropoda melanoleuca]
          Length = 1864

 Score = 42.0 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 74/259 (28%), Gaps = 24/259 (9%)

Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI-----GHETDW 253
             +  R  P       A   GS    + F D  +  A   +++   S +     GH    
Sbjct: 275 QRQIDRPRPPGGGGASASAPGSSPPPF-FADFEMGWAGGQAALGPCSQVPAPIPGHFQAT 333

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
              D         P    E     +     S ++ + +    + +  + K      L   
Sbjct: 334 PQEDV-----ENPPAILGEPERQQRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQ 388

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L  +    +       RL        ++           +    + D  +   Q  +  +
Sbjct: 389 LREAQNENARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKL 448

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              +Q ++ + +   R   LE + + A L +  +Q + R             R++   + 
Sbjct: 449 EGLEQVLKHMREAAQRRRQLEVEHEQARLSLQEKQEEVR-------------RLQQAQAE 495

Query: 434 KIKSCHTSVSITTRILQSF 452
             +    +V +    L S 
Sbjct: 496 AKREHEGAVQLLESTLDSM 514


>gi|238021325|ref|ZP_04601751.1| hypothetical protein GCWU000324_01224 [Kingella oralis ATCC 51147]
 gi|237868305|gb|EEP69311.1| hypothetical protein GCWU000324_01224 [Kingella oralis ATCC 51147]
          Length = 880

 Score = 42.0 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/183 (8%), Positives = 52/183 (28%), Gaps = 7/183 (3%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
                     +       S+ +N      + +   +       +   +   N  Q ++  
Sbjct: 1   MADNNLVLRIIMNASDRASNAMNRVRDAASGLSGRLGRLQQAFDRSARNRNNLTQYINQ- 59

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
           R  + +L  ++++  + I               +       +Q++ +   ++ Q ++Q  
Sbjct: 60  RQAMRQLDAQMQNTQQRIQSLAQTQRQQGSLTREQQREWTQLQRSMRQSQQEYQRLQQSS 119

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
                 +         I      +++ R+   H      + R E    +++         
Sbjct: 120 HALGNEL-----RTQGISTTRLRESQARLNREHDEAAHALER-ERAALNRLDRARERSQR 173

Query: 445 TTR 447
            ++
Sbjct: 174 MSQ 176


>gi|145539446|ref|XP_001455413.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423221|emb|CAK88016.1| unnamed protein product [Paramecium tetraurelia]
          Length = 555

 Score = 42.0 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/189 (11%), Positives = 58/189 (30%), Gaps = 10/189 (5%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
            +   +  +  + +L      +       +       L  L  S + L   R   +RL  
Sbjct: 256 VLEDLKKSRERVEDLRRSRERLEYMQDLKRSRERIEQLDDLRRSRERLDDLRRSRERLED 315

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
             +    +    + +     +  ++        Q     + + ++ +E + K   R   L
Sbjct: 316 LKKSRERLSQLEELKRSRQRMEELEELKKSRERQAQIDELKKSRERLEDLRKSRERLEQL 375

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTH------IKKLITRIEFILSHK----IKSCHTSVS 443
           E++ K         ++++RI  L         ++    R+E +   K    ++     + 
Sbjct: 376 EQERKNQEKIEELRKSRSRIEELQKQRRKVEELRTSQERLEQLKKQKEEIELRRSQERLE 435

Query: 444 ITTRILQSF 452
              +  +  
Sbjct: 436 DLRKSRERL 444


>gi|169348422|ref|ZP_02866360.1| hypothetical protein CLOSPI_00137 [Clostridium spiroforme DSM 1552]
 gi|169293891|gb|EDS76024.1| hypothetical protein CLOSPI_00137 [Clostridium spiroforme DSM 1552]
          Length = 1017

 Score = 42.0 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 1    MNPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59
            M+P +  K +L+    SVSEL  ++   V   ++   V+  I   +G       +    D
Sbjct: 912  MHPIALIKQNLNLKIISVSELHNNIDKYVTIVMAISRVKA-IVDKKGQE---MCFVDGYD 967

Query: 60   NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105
                ID +++      ++ +   G   L+ G++       K  ++I
Sbjct: 968  ETGEIDGVVFANNYQTLKNVLVRGDICLIEGQVKF---RDKLSLVI 1010


>gi|312864545|ref|ZP_07724776.1| DNA polymerase III, alpha subunit [Streptococcus downei F0415]
 gi|311099672|gb|EFQ57885.1| DNA polymerase III, alpha subunit [Streptococcus downei F0415]
          Length = 1035

 Score = 42.0 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 34  HVCVRGEISGYRGIH--SSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89
            V V G+I   R I   S G   A+ SL D   ++D  ++  +  K     +EG  + + 
Sbjct: 887 QVRVLGQIEAVRVIRTKSKGQQMAFVSLTDTKQKLDVTVFPESYQKWRDWLKEGQIYYMT 946

Query: 90  GKITTFPGSSKYQIIIESLIP 110
           GK+         Q+I++++ P
Sbjct: 947 GKVR--ERDGHLQLILQAIEP 965


>gi|269217870|ref|ZP_06161724.1| single-strand binding protein [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212805|gb|EEZ79145.1| single-strand binding protein [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 176

 Score = 42.0 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 59  DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSK----YQIIIESLIPS 111
           D  +  I   +W+     +     +G+  LV G++T   +  + +     ++ ++ + PS
Sbjct: 49  DGEAMFIRCSVWREHGENVAESLSKGMRVLVTGRLTVRSYEYNGQQRTSLEMQVDEIGPS 108


>gi|257093175|ref|YP_003166816.1| hypothetical protein CAP2UW1_1573 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045699|gb|ACV34887.1| conserved hypothetical protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 717

 Score = 42.0 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 5/161 (3%)

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +   L +  +AL  +       R     L                       + + +  +
Sbjct: 21  RHQQLANKSQALDEALHHFLDQRPVGKNLSWLDRATGLAAAPFWREADVVNASELSALAM 80

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              ++      +E  + +   V   LR+     K        L    ++R+      I  
Sbjct: 81  SRILRHESAISVELLEQLSHAVPDTLRWAIRYSKLFARTDSALWTLLRDRVQGEEWRIFI 140

Query: 423 -LITRIEFILS---HKIKSCHTSVSITTRILQSFAYKNTLK 459
            +  R+   L      I+     ++  + +L++ +Y + L 
Sbjct: 141 GVCDRLLAQLQPFDQLIQRAQKQLAYLS-LLETLSYLSVLA 180


>gi|327303746|ref|XP_003236565.1| hypothetical protein TERG_03608 [Trichophyton rubrum CBS 118892]
 gi|326461907|gb|EGD87360.1| hypothetical protein TERG_03608 [Trichophyton rubrum CBS 118892]
          Length = 363

 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 49  LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 108

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 109 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 166

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + SA G +       W +   D      
Sbjct: 167 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 226

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ + ++   +  ++   +      ++  + 
Sbjct: 227 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 286

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          + +    +   + + RQ + EK+  +E
Sbjct: 287 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 346

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 347 SGRPLEDKIKRKGFSLR 363


>gi|60360472|dbj|BAD90480.1| mKIAA4026 protein [Mus musculus]
          Length = 986

 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 716 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 775

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 776 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 835

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 836 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 895

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 896 MSELQQLQNEKCHLLVEHETQKLKALD 922



 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 649 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 702

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 703 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 762

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 763 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 822

Query: 440 TSV 442
             +
Sbjct: 823 ARL 825


>gi|115400025|ref|XP_001215601.1| cell division control protein 3 [Aspergillus terreus NIH2624]
 gi|114191267|gb|EAU32967.1| cell division control protein 3 [Aspergillus terreus NIH2624]
          Length = 405

 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 82/275 (29%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N I            PTG  ++ +   +  R   +V + PV  + D    E  +   
Sbjct: 133 NRTNIIDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 192

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM-------IVRAIANSSIPIISAI- 247
           Q   +          I    R     E+    N E+       +V A    + P    + 
Sbjct: 193 Q--RILADIQHHNIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANNEITTPDGRKVR 250

Query: 248 GHETDWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           G    W +   D                    +    ++ +  E   ++ + ++   +  
Sbjct: 251 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNMLYENYRSDKLTQMGVAQDP 310

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 311 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 370

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 371 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 405


>gi|22299718|ref|NP_682965.1| hypothetical protein tlr2175 [Thermosynechococcus elongatus BP-1]
 gi|22295902|dbj|BAC09727.1| tlr2175 [Thermosynechococcus elongatus BP-1]
          Length = 1003

 Score = 41.7 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 21/216 (9%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            ADL A  P  AA ++         + +         + +       +L+   + L  + 
Sbjct: 277 IADLEARAPLLAAAVSQWQSLKTAEAQLQQCFANYQQLRQERDRHQQSLDQQRQDLLRTL 336

Query: 319 QTLSCSRYRLDRLPRELEHNLEI---------IIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             L   +  L    ++LE  L+           + R   H        +  F +   ++ 
Sbjct: 337 HGLESQQQFLLEQCQQLEKLLKQENQIVAAFEQLQRARAHLQAQEALQQKVFPLLQAKQR 396

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-----------KNRIFYLHT 418
            +   ++Q+   +  +  L+ ++    ++I     L+E             K RI+  H 
Sbjct: 397 LELERQQQEQRLRSRRDELQQLWQHLHQQIERQPALQEAVTLITAQIATLEKQRIYQDHV 456

Query: 419 HIKKL-ITRIEFILSHKIKSCHTSVSITTRILQSFA 453
             K L   R    L  + +     +    + L+   
Sbjct: 457 REKGLERRRFLEQLQTRQREYERQIHQLEQRLELLN 492


>gi|154335920|ref|XP_001564196.1| kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061230|emb|CAM38252.1| putative kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1097

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/197 (9%), Positives = 63/197 (31%), Gaps = 9/197 (4%)

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
                     +    +  LQ +  ++          + K      + L +     ++ L+
Sbjct: 714 HFDDIDIVMALVREKETLLQRACEDILDTNTESAAAVEKMLREREHDLRETKRLHEEKLA 773

Query: 323 CSRYRL----DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNIQKNRQHI 373
               R          E     + ++ R       +  R++    I        ++ ++ +
Sbjct: 774 AQAERFCTRLKEASDENAAQQQQLLDRHRDAIAQLEERLQRSREISEIELKRSEEAKEQL 833

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            ++ Q  ++ ++   +      + ++      R ++ + +  L    ++  TR++  + H
Sbjct: 834 KQRMQVAQERMRHEYQQEIERLRARLDGDIGDRHKSVDALRQLQEMHEREATRLKDEMDH 893

Query: 434 KIKSCHTSVSITTRILQ 450
             +S  +  +     L+
Sbjct: 894 LRRSRDSDCARLQNQLE 910



 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/155 (9%), Positives = 44/155 (28%), Gaps = 1/155 (0%)

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +   +    + ++ ++  +   +  L  +   +     E    +E ++  +         
Sbjct: 707 LYHRVLPHFDDIDIVMALVREKETLLQRACEDILDTNTESAAAVEKMLREREHDLRE-TK 765

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
           R+  + L    ++    + E         +Q L        +    L   RE ++  +  
Sbjct: 766 RLHEEKLAAQAERFCTRLKEASDENAAQQQQLLDRHRDAIAQLEERLQRSREISEIELKR 825

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                ++L  R++             +      L 
Sbjct: 826 SEEAKEQLKQRMQVAQERMRHEYQQEIERLRARLD 860


>gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425]
          Length = 699

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 66/180 (36%), Gaps = 1/180 (0%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           +      E+ Q+ +      +  ++  + + K   + +  K    + Q L  +    +  
Sbjct: 109 DQLGEEAENFQTEVEQQRQTITGLVASVDRLKQEQVTTWTKEQEAARQQLQTAIASFNTD 168

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
             +L+ NL+    +  +          +  L    ++ +    E +Q++E +  Q +  +
Sbjct: 169 LHQLQDNLQSRKTQIEQGLAR-AQTEFATRLDQLQKETQTKHSEIRQYLESLPTQMIPQL 227

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
              ++     L   ++QT   +  L       ++R++    ++ ++   ++S     L +
Sbjct: 228 EELRQAAQHQLQQQQQQTLETLQKLEREFSGQLSRLQSAAQNQQEATEQTLSSLQAQLTA 287


>gi|148691804|gb|EDL23751.1| serine/threonine kinase 10 [Mus musculus]
          Length = 946

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 676 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 735

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 736 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 795

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 796 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 855

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 856 MSELQQLQNEKCHLLVEHETQKLKALD 882



 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 609 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 662

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 663 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 722

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 723 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 782

Query: 440 TSV 442
             +
Sbjct: 783 ARL 785


>gi|117616478|gb|ABK42257.1| Stk10 [synthetic construct]
 gi|118763622|gb|AAI28364.1| Serine/threonine kinase 10 [Mus musculus]
          Length = 966

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 875

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 876 MSELQQLQNEKCHLLVEHETQKLKALD 902



 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802

Query: 440 TSV 442
             +
Sbjct: 803 ARL 805


>gi|109113171|ref|XP_001111594.1| PREDICTED: centrobin-like isoform 3 [Macaca mulatta]
          Length = 901

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +    +            S  + L      +   R    +   +L+ + + +    
Sbjct: 319 EAEQQRCCALQEERDAARAGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQALQEEN 378

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 379 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 438

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 439 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 487


>gi|126362973|ref|NP_033314.2| serine/threonine-protein kinase 10 [Mus musculus]
 gi|56207153|emb|CAI25517.1| serine/threonine kinase 10 [Mus musculus]
          Length = 966

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 875

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 876 MSELQQLQNEKCHLLVEHETQKLKALD 902



 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802

Query: 440 TSV 442
             +
Sbjct: 803 ARL 805


>gi|78063640|ref|YP_373548.1| hypothetical protein Bcep18194_B2793 [Burkholderia sp. 383]
 gi|77971525|gb|ABB12904.1| hypothetical protein Bcep18194_B2793 [Burkholderia sp. 383]
          Length = 448

 Score = 41.7 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 17/218 (7%)

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                  R            L  L +   + + +  R      E    L   I R+    
Sbjct: 150 WALMTHPRTTMGVRQAAFGDLHMLSHLVGSANRADIRRLVALEEENAALHAKIERQQARL 209

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
             +  +  +     +    RQ+      +++ +     LR     + E++A+    RE  
Sbjct: 210 QEMSAQRDAALQERDALAARQNAQPLAAENVLREEVHELREALAARDERLALHTSRREAA 269

Query: 410 KNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTR------ILQSFAYKNTLKRG 461
           + RI       + +  R++    +   +++  +++    +        ++    + L+ G
Sbjct: 270 EQRIAAEQASARAMRARLDDLMAMVKTLRAEASAIEQAVQASADDPAERAADPLSILQ-G 328

Query: 462 ----YTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
               Y   +  +N  I +    A          DG   
Sbjct: 329 TRLVYVGGRPGSNRAIKRIVETAGGEM---TLHDGGIE 363


>gi|118395962|ref|XP_001030325.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89284624|gb|EAR82662.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 3175

 Score = 41.7 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 9/164 (5%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD--- 360
           +      +  + N ++ L+                LE     +      +  R       
Sbjct: 799 MQQNLDNVNNILNEERQLNSQLQEEIAKLNGANSQLESQFIEESIKCKQLNEREVHYKQE 858

Query: 361 --FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              L   I    Q +L+ +  I  +      +    +K K   ++ + +Q +  I  +  
Sbjct: 859 IGNLQQQIAYKHQELLQLKDQITSLSDSSSEFKEEAQK-KFEYMNQVIKQKQQEIEDMQN 917

Query: 419 HIKKLITR---IEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
            +  L  +   +      K++S     +   + L S   +  LK
Sbjct: 918 QLDDLEKQIQDLNHQSEQKLESQKIQYNQQIQELNSLNQQYILK 961


>gi|238752747|ref|ZP_04614216.1| Exonuclease SbcC [Yersinia rohdei ATCC 43380]
 gi|238709005|gb|EEQ01254.1| Exonuclease SbcC [Yersinia rohdei ATCC 43380]
          Length = 1179

 Score = 41.7 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 60/182 (32%), Gaps = 8/182 (4%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                L  +    +  LI  + + L  L   L          R +L+   ++L+   + +
Sbjct: 298 HEQETLIEQKVVPLDNLIAQQQHLLAQLATQLQQLRGKEQQGRQQLELNLQQLQQTHQRL 357

Query: 343 IFRKYR-HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
                  H +      + +  +   Q  + H+ ++Q    +   Q    +  E +++   
Sbjct: 358 QQLAEYAHLHTHHQHWEKNLPLWREQFRQIHMQQQQSAESKQQLQQQITLLNELQQQTTT 417

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI------LQSFAY 454
           L+   +Q +  +   H+    +  ++  +   + +      +++  +       L + + 
Sbjct: 418 LNEQDKQQQTALAQAHSQTSSIQQQLSRLEQLQPLAQLRQQLTVLQQQRPMRQQLAALSP 477

Query: 455 KN 456
             
Sbjct: 478 LA 479


>gi|58268954|ref|XP_571633.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|57227868|gb|AAW44326.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 2094

 Score = 41.7 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/197 (10%), Positives = 53/197 (26%), Gaps = 17/197 (8%)

Query: 282  QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRLPREL 335
                +            L+             +    + +         +   D +    
Sbjct: 1809 YHQQLRTRNAGTVEFHALVNLVEQQSVIPFSQISQVQRLIDELYPTVTKQRDSDAMAERK 1868

Query: 336  EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
              +L   + R       +   IK+       +  R   L+ +Q   Q   +        +
Sbjct: 1869 LADLRSKMSRMDMKIGQVEKLIKARRDSSFSEAARLMDLDPEQAAYQAKLRKATQDAEGQ 1928

Query: 396  KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSF 452
             E++  L    ++   R  +     +  + RI+  + +    I+    ++   +R + S 
Sbjct: 1929 IEQLENLLAGLKRRAERQEHRQNPSQPPLERIQRSVRNIDAAIRERQQTIDELSRRIASL 1988

Query: 453  ---AYKNTL-----KRG 461
                 +  L      RG
Sbjct: 1989 RVSTPREILLSQSVARG 2005


>gi|134112630|ref|XP_774858.1| hypothetical protein CNBF0230 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50257506|gb|EAL20211.1| hypothetical protein CNBF0230 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 2094

 Score = 41.7 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/197 (10%), Positives = 53/197 (26%), Gaps = 17/197 (8%)

Query: 282  QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRLPREL 335
                +            L+             +    + +         +   D +    
Sbjct: 1809 YHQQLRTRNAGTVEFHALVNLVEQQSVIPFSQISQVQRLIDELYPTVTKQRDSDAMAERK 1868

Query: 336  EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
              +L   + R       +   IK+       +  R   L+ +Q   Q   +        +
Sbjct: 1869 LADLRSKMSRMDMKIGQVEKLIKARRDSSFSEAARLMDLDPEQAAYQAKLRKATQDAEGQ 1928

Query: 396  KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSF 452
             E++  L    ++   R  +     +  + RI+  + +    I+    ++   +R + S 
Sbjct: 1929 IEQLENLLAGLKRRAERQEHRQNPSQPPLERIQRSVRNIDAAIRERQQTIDELSRRIASL 1988

Query: 453  ---AYKNTL-----KRG 461
                 +  L      RG
Sbjct: 1989 RVSTPREILLSQSVARG 2005


>gi|332523900|ref|ZP_08400152.1| DNA polymerase III, alpha subunit [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315164|gb|EGJ28149.1| DNA polymerase III, alpha subunit [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 1036

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 19  ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKGTLNKI 76
           E +  +K +++ +   V V+ E        SSG   A+ ++ D   +ID  ++     + 
Sbjct: 876 EFTPIIK-LLKDSDQTVLVQIEKVRIIRTKSSGQQMAFLTVTDTKKKIDVTVFPQEFLQF 934

Query: 77  EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           + L  EG    + G++      ++ QI+++++  +
Sbjct: 935 KHLLTEGQMVFIQGRVK--ERDNRLQIVVQTITLA 967


>gi|124244085|ref|NP_001013793.2| hypothetical protein LOC381260 [Mus musculus]
          Length = 1059

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/175 (9%), Positives = 47/175 (26%), Gaps = 4/175 (2%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIII-RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            E +              E    + I     + +   +    +              + ++
Sbjct: 837  ERSHEDPSKALQDKKQQEKASRDRIRIEKAEMRWLKVEQRRREQEELTWLHKEQLEKAEK 896

Query: 331  LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
            +  ELE   +                 +        +K R  +   ++   Q  ++  R 
Sbjct: 897  MKEELELEQQRRTEEN--RLRKQRLEEERQQQEEAEKKRRLQLQAARERARQQQEELRRK 954

Query: 391  IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-EFILSHKIKSCHTSVSI 444
            +   +++K        E  K R   L   + +   R+ E     +++     ++ 
Sbjct: 955  LQEIQRKKQQEAAERAEAEKQRQKELEMQLAEEQKRLMEMAEEERLEYQQQKLAA 1009


>gi|73669808|ref|YP_305823.1| hypothetical protein Mbar_A2319 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396970|gb|AAZ71243.1| tRNA(Ile2) 2-agmatinylcytidine synthetase [Methanosarcina barkeri
           str. Fusaro]
          Length = 428

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 9/93 (9%)

Query: 30  SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86
            ++    + G +S        GH  F ++D   + ID   ++       +      G   
Sbjct: 267 RDMHSYTLEGTVSAIPKTLHGGHVIFPIQDKEENEIDCAAFEPTKNFRLLIRRLRPGDRI 326

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
           +V G +          + IE +       L   
Sbjct: 327 VVSGSVN------SRTLNIEKIEIKNLVPLYRE 353


>gi|307111694|gb|EFN59928.1| hypothetical protein CHLNCDRAFT_56456 [Chlorella variabilis]
          Length = 2869

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 45/162 (27%), Gaps = 2/162 (1%)

Query: 292  LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351
                  R        L   L +L   +Q     + ++      L   L +          
Sbjct: 1638 WQLDQARSSGAHQADLEEQLASLRRLEQHALQEKQQMADQAARLSSELNLARSEAAHRTA 1697

Query: 352  HIINRIKS-DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +  ++ S        Q  RQ + ++   +   ++Q          +  + LH+LR+  +
Sbjct: 1698 ELEAQLASLQHSEQQAQHERQQLADQAARLAAELEQARSDAGQRMADLESQLHLLRQS-E 1756

Query: 411  NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
                +          R+   L     S    ++     L S 
Sbjct: 1757 QAAQHERQQAADYAGRLSAELEQARDSAGQQIADLEGQLHSL 1798



 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/163 (6%), Positives = 40/163 (24%), Gaps = 1/163 (0%)

Query: 290  ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                  + +  ++                  L  ++    +   +LE  L+         
Sbjct: 1591 QAQLAALRQSERHAQQERQQQADEASRLAAELQQAQAAAAQRAADLEWQLDQARSSGAHQ 1650

Query: 350  FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
             +          L  +  + +Q + ++   +   +    R     +  ++       + +
Sbjct: 1651 ADLEEQLASLRRLEQHALQEKQQMADQAARLSSEL-NLARSEAAHRTAELEAQLASLQHS 1709

Query: 410  KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + +  +    +     R+   L          ++     L   
Sbjct: 1710 EQQAQHERQQLADQAARLAAELEQARSDAGQRMADLESQLHLL 1752


>gi|153874825|ref|ZP_02002894.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152068712|gb|EDN67107.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 381

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 11/163 (6%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            +             + +      +     RL++   E          R  +    +  +
Sbjct: 9   RQKWVKNQQQWKKHDQQIAGLTSAIKKLEQRLEQKIEEDRQKWAENQKRFEKLEQRLEQK 68

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQI------VKQHLRYIFLEKKEKIAILHMLREQTK 410
           I+ D       +N+Q + +  Q I ++      ++Q L     E ++K        E+  
Sbjct: 69  IEED--RQKWAENQQQLEKHGQQIARLTSAIEKLEQRLDQKIEEDRQKWMENQQQLEKHG 126

Query: 411 NRIFYLHTHIKKLITRIEFIL---SHKIKSCHTSVSITTRILQ 450
            +I  L + I+KL  R+E  +     K       +    + L 
Sbjct: 127 QQIARLTSAIEKLEQRLEQKIEEDRQKWMENQKRLENLEQRLD 169


>gi|119610511|gb|EAW90105.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_b
           [Homo sapiens]
          Length = 806

 Score = 41.7 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 223 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 282

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 283 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 342

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 343 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 391


>gi|302535600|ref|ZP_07287942.1| single-stranded DNA-binding protein 1 [Streptomyces sp. C]
 gi|302444495|gb|EFL16311.1| single-stranded DNA-binding protein 1 [Streptomyces sp. C]
          Length = 195

 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109
           KD  S  +   +W+     +    + G+  +V G++   ++        + Y++ +E + 
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLRQRSYEDREGVKRTVYELDVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|207722386|ref|YP_002252822.1| hypothetical protein RSMK04992 [Ralstonia solanacearum MolK2]
 gi|206587565|emb|CAQ18147.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 698

 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D                   + +        L   +   +              L    
Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSAGLLEGVAVRLDTTASRISQAWTEALSQQD 399

Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            ++  L+    R                   L +        +  R  +      + + S
Sbjct: 400 QANAQLTGQHQRALEAATATFEQHAATLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459

Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
               L     +        QQ     + +              + IA L  L +      
Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAELSRLVQAASEAP 519

Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
                 + +L  ++   +      ++     ++    +L +  + +T +R        + 
Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574

Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502
              T    L    R+   F D         G A A V   A
Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612


>gi|149177992|ref|ZP_01856589.1| hypothetical protein PM8797T_32275 [Planctomyces maris DSM 8797]
 gi|148843185|gb|EDL57551.1| hypothetical protein PM8797T_32275 [Planctomyces maris DSM 8797]
          Length = 1249

 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/205 (7%), Positives = 54/205 (26%), Gaps = 16/205 (7%)

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
           A     + ++   ++E  Q      E        +           + + L    +    
Sbjct: 684 AQPDRESLQILNRLRELAQRQKDLNEQLKALADKQRFAKTDQEREEIERQLKRLRERQRE 743

Query: 324 S-------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ---KNRQHI 373
                     R+D+  +         + +   H       +K   +   +    + +Q +
Sbjct: 744 LLRKADEVAQRMDQSKQPSSTKSRRELEQTRNHLQQSSESLKEGQISRALNSGTRAQQQL 803

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH------THIKKLITRI 427
            + +    +             K++   L   ++Q  N++                  + 
Sbjct: 804 DQLKNDFRKKTANQFADTMRGLKQQAEQLDEKQKQISNQLDKQQQQAQTQERKSLRKNQG 863

Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452
           +  L+++++     +      ++  
Sbjct: 864 QQELANQLQEQEDRLKNLMEQMKQV 888


>gi|62914024|gb|AAH14055.3| CNTROB protein [Homo sapiens]
          Length = 805

 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 222 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 281

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 282 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 341

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 342 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 390


>gi|51172578|dbj|BAD36753.1| single stranded-DNA binding protein [Onion yellows phytoplasma]
 gi|327202153|gb|AEA36724.1| single-stranded DNA binding protein [Periwinkle leaf yellowing
          phytoplasma]
          Length = 104

 Score = 41.7 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRTQADNMFMYLHKGSKVYVEGSLSV 75


>gi|289596603|ref|YP_003483299.1| domain of unknown function DUF1743 [Aciduliprofundum boonei T469]
 gi|289534390|gb|ADD08737.1| domain of unknown function DUF1743 [Aciduliprofundum boonei T469]
          Length = 446

 Score = 41.7 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75
             +K +      +V +RG++         GHA F ++D+  +ID         ++ T+NK
Sbjct: 278 RRIKKV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 335

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
           ++     G E  V G +          I IE + 
Sbjct: 336 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 361


>gi|254167847|ref|ZP_04874696.1| conserved domain protein [Aciduliprofundum boonei T469]
 gi|197623138|gb|EDY35704.1| conserved domain protein [Aciduliprofundum boonei T469]
          Length = 439

 Score = 41.7 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75
             +K +      +V +RG++         GHA F ++D+  +ID         ++ T+NK
Sbjct: 271 RRIKKV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 328

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
           ++     G E  V G +          I IE + 
Sbjct: 329 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 354


>gi|145527772|ref|XP_001449686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417274|emb|CAK82289.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1178

 Score = 41.7 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/176 (9%), Positives = 58/176 (32%), Gaps = 6/176 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLDRLPR 333
             +E LQ+    + ++  + + +  K +            + ++ L     + +     +
Sbjct: 814 QEEEALQNLEYQIFSKFQHQMEQRSKQENQRKIQSQLEFRSKEKELLDQIKQEQWKMDSQ 873

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           + +  +E +   + +    + N  + + + +  + N+     K   +E+  K   +    
Sbjct: 874 QQQIKVEQLKQLRMQQIQELENEAQLEEVEYQERINQFQQDLKMIQLEREKKLRDQLF-- 931

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             +E+I+   +     K           +   + E  +    K     + +  + L
Sbjct: 932 --QEQISKEELQLRDKKQVEDKKRQSSVQRRQQFEQEMERIAKQHQEKLRMQEQQL 985


>gi|328772567|gb|EGF82605.1| hypothetical protein BATDEDRAFT_86542 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 858

 Score = 41.7 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 50/166 (30%), Gaps = 6/166 (3%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           Q      E           + +      L        +     + R   L    +   + 
Sbjct: 454 QDEKRRQEELERLEKRLQEEKQRQDERRLQDEKRRQQELEELQKQRQRELKELEKQRQQE 513

Query: 342 IIFRKYRHFNHIINRIKSDFL---IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           +   + +       + +           +K  Q    +QQ +E++ KQ  + +   +K++
Sbjct: 514 LEELEKQRQEEKRLQDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQRQQELEKLEKQR 573

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK---SCHTS 441
              L  L +Q +  +  L    ++ + +++     +++        
Sbjct: 574 QQELEKLEKQRQQELEKLEKQRQQELEKLQKQRQQELEELERKRQQ 619


>gi|83765304|dbj|BAE55447.1| unnamed protein product [Aspergillus oryzae]
          Length = 405

 Score = 41.7 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%)

Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195
              N +            PTG  ++ +   +  R   +V + PV  + D    E      
Sbjct: 133 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 192

Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252
           Q   +          I    R     E+    N E++     A+  ++  + +A G +  
Sbjct: 193 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 250

Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
                      D                    +    ++    E   ++ + ++   +  
Sbjct: 251 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 310

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363
           ++   +      ++  +    +L ++  E++   +  +  K        + + +    + 
Sbjct: 311 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 370

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
             +++ RQ + EK+  +E       +        +
Sbjct: 371 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 405


>gi|156034591|ref|XP_001585714.1| hypothetical protein SS1G_13230 [Sclerotinia sclerotiorum 1980]
 gi|154698634|gb|EDN98372.1| hypothetical protein SS1G_13230 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 587

 Score = 41.3 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 23/300 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   E  +  +   E  F             N +            
Sbjct: 273 LRLTVVDTPGFGDFVNNDESWRPIVDNIEQRFDAYLDAENKVNRVNIVDNRVHACVYFIQ 332

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E   A      +          I  
Sbjct: 333 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEITAFKF--RILADIKHHDIQIFE 390

Query: 214 LARGGGSIEDLWHFNDEMI-----VRAIANSSIPIISA---IGHETDWTLA--DYAADLR 263
                   E+    N E++         ANS I         G +  W +   D      
Sbjct: 391 GPHYEKDDEETIAENKEIMDKVPFAVVGANSEITNNEGRKVRGRKYPWGVIEVDNEEHCD 450

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   +  +  +   +   +   +      ++    
Sbjct: 451 FVKLRQMLIRTHMEELKEHTNNALYENYRSEKLTAMGVTQDPNVFKEVNPAVKQEEERQL 510

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          + +    +   +++ RQ + EK+  +E
Sbjct: 511 HEQKLAKMEAEMKMVFQQKVAEKESKLKQSEEELYARHREMKEQLERQRQELEEKKSRVE 570


>gi|294630309|ref|ZP_06708869.1| single-strand binding protein [Streptomyces sp. e14]
 gi|292833642|gb|EFF91991.1| single-strand binding protein [Streptomyces sp. e14]
          Length = 194

 Score = 41.3 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109
           KD  S  +   +W+     +    + G+  +V G++   ++        + Y++ +E + 
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|42558981|sp|Q8BSS9|LIPA2_MOUSE RecName: Full=Liprin-alpha-2; AltName: Full=Protein tyrosine
           phosphatase receptor type f polypeptide-interacting
           protein alpha-2; Short=PTPRF-interacting protein alpha-2
          Length = 1257

 Score = 41.3 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +        + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|312869939|ref|ZP_07730078.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3]
 gi|311094524|gb|EFQ52829.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3]
          Length = 1188

 Score = 41.3 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/173 (9%), Positives = 48/173 (27%), Gaps = 4/173 (2%)

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
                    +      ++R    + + L  L   L +S Q +   R +      ELE   
Sbjct: 214 DYLEQKEQFDRLDQTQLVRNYDQQHDQLQRLQGKLADSRQLVDQYRKKTAAADTELEKYK 273

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
           +     +    +     I     +    +N+Q I   ++  ++  +  L       +++ 
Sbjct: 274 QQRTALQRDK-DAANQSILRQTQLIADYQNQQSISTVKRQQQEQEQHRLSEQISANQQEQ 332

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             +       K  +      + +   +++             +      L+  
Sbjct: 333 EQVQKRLAAVKQDLTAHEQTMAEHKKQLQAAEQQT---ASERLQQLQARLEEL 382


>gi|254416888|ref|ZP_05030636.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC
           7420]
 gi|196176252|gb|EDX71268.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC
           7420]
          Length = 1274

 Score = 41.3 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/188 (7%), Positives = 48/188 (25%), Gaps = 3/188 (1%)

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
           R           +      +S       +    I  L + +    + L K          
Sbjct: 741 RESATAKQLTQTLTDARETRSQTQLRLEQSRKDIQGLTEQQTQVRSLLAKNTQEVQTAAE 800

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
             +     L    +      +  +           +   +   I+     + +++Q + +
Sbjct: 801 RLQQLNQDL--PAQERQLQALREQLAQLEAEQTPQEWQQIQSQIKTQEAVLGDREQALRE 858

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTS 441
             KQ        ++    +    +   + +  +      +  I R    +  +I+     
Sbjct: 859 AEKQLQALENQHQRTNEQLATSYQRIAEYQTQHQSIQEQQAEINRQLEAIEVQIEQTQAR 918

Query: 442 VSITTRIL 449
           ++   + L
Sbjct: 919 LTQLEQRL 926


>gi|60360140|dbj|BAD90289.1| mKIAA4112 protein [Mus musculus]
          Length = 1261

 Score = 41.3 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 168 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 225

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 226 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 285

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +        + S +G    E +    D        T           ++      I
Sbjct: 286 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 344

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 345 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 404

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 405 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 447

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 448 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 501


>gi|330504719|ref|YP_004381588.1| SMC domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328919005|gb|AEB59836.1| SMC domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 1144

 Score = 41.3 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 59/205 (28%), Gaps = 3/205 (1%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E +  + D  A      P  A  +    +    S    L        +   + ++  L S
Sbjct: 528 EQEQRIQDLEAYRAQLQPGEACPLCGSHEHPAVSQYQALNVSATRQALEECRGELAQLES 587

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK- 368
              AL +    L+    +L +   + +        +  +H      +I     +  +Q+ 
Sbjct: 588 QGAALRDELTRLATQIVQLQQQLEQAQLQSTQQSAQWQQHLAEQNWQIADGNALRQLQRE 647

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           + Q + + Q  +  +  +  +        ++A       Q +  +            R +
Sbjct: 648 HEQSLAQLQDRLAAVETRQTQLAQARNVREVAERAQADMQQRQALLARDEDNLLARQREQ 707

Query: 429 FILSHKIKSCHTSVSITTRILQSFA 453
                +++           +L S  
Sbjct: 708 REHLQRLEHELQRHEQ--ALLASLD 730


>gi|118377124|ref|XP_001021744.1| hypothetical protein TTHERM_00152120 [Tetrahymena thermophila]
 gi|89303510|gb|EAS01498.1| hypothetical protein TTHERM_00152120 [Tetrahymena thermophila
           SB210]
          Length = 505

 Score = 41.3 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 54/181 (29%), Gaps = 1/181 (0%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            +    +    + +    + L    +     + N  +  ++ L +  Q +     +    
Sbjct: 158 NIPSYFENQEDNQMQENISELYVDSVICRMIEKNCYDLSIQDLYSDIQKIKEDNSKEMFF 217

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
             +    LE +I  +  H     N  K+        + +Q  L  QQ   Q + Q  +  
Sbjct: 218 QEKRIFQLESLIQIEQMHHRTYENEKKNLITKIAEMEIKQENLLSQQKQYQELIQKFKQE 277

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
               +EK+        Q K +       +K     +      +++     +    + L+ 
Sbjct: 278 MGRLQEKLEFREYELNQLKEKKNVYQAKLKDCQD-LNQEFKQRLEYKEKQLDDKDKQLED 336

Query: 452 F 452
            
Sbjct: 337 L 337


>gi|329112534|ref|NP_001192270.1| liprin-alpha-2 isoform 1 [Mus musculus]
 gi|190148193|gb|ACE63188.1| liprin-alpha 2 [Mus musculus]
          Length = 1257

 Score = 41.3 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +        + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|40789298|ref|NP_796347.2| liprin-alpha-2 isoform 2 [Mus musculus]
 gi|40674816|gb|AAH65133.1| Protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2 [Mus musculus]
 gi|148689738|gb|EDL21685.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2, isoform CRA_a
           [Mus musculus]
          Length = 1256

 Score = 41.3 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +        + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|301065253|ref|YP_003787276.1| hypothetical protein LCAZH_0128 [Lactobacillus casei str. Zhang]
 gi|300437660|gb|ADK17426.1| Protein of unknown function DUF214 [Lactobacillus casei str. Zhang]
          Length = 1185

 Score = 41.3 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/278 (8%), Positives = 88/278 (31%), Gaps = 13/278 (4%)

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI-AN 238
            ++  +   +  + +L+  + K       P+II     G S           +V +   +
Sbjct: 144 TIKFVQRADQTGSKVLKRTSFKVVGFVYSPEIISSINKGNSTSGSGDLKGYGVVTSNNFD 203

Query: 239 SSIPIISAIGH---ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           S + +++ + +   +     +    D      T    +     +   +++        + 
Sbjct: 204 SDVYMMARLTYRNTKGLDPYSSQYTDRIQAHKTALNHLLQNAPQARLAAIKKQYQAKIDA 263

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + +      LN+  + L    Q L+ ++ ++    +EL+  ++    +       +  
Sbjct: 264 GQKKLDDAKAQLNAAQEQLTTGAQQLATAKQQVAAKQQELDAGVKNGQAQIASGETQLQQ 323

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                     + ++RQ ++  +Q +   Q          +  K+++       + ++ ++
Sbjct: 324 A------STQLSQSRQQLITAKQQLVAGQQQLDDKHQALVAAKQQLDAAKQQLDNSQQQL 377

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                 +              + +    ++   + L +
Sbjct: 378 ATAKQQLTTGQQ-QLNAKQQDLTTAKQQLNAAKQQLDA 414


>gi|218440494|ref|YP_002378823.1| hypothetical protein PCC7424_3565 [Cyanothece sp. PCC 7424]
 gi|218173222|gb|ACK71955.1| protein of unknown function DUF323 [Cyanothece sp. PCC 7424]
          Length = 925

 Score = 41.3 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 55/188 (29%), Gaps = 6/188 (3%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR--LPRELE 336
           E  +           +   R  + +        +    + +     R R +     +   
Sbjct: 408 ERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQA 467

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL----RYIF 392
                    + R       + + D      +  RQ  L++Q+  E+I KQ      R   
Sbjct: 468 EAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAK 527

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           LE++ +        E  + R        ++   + +  L  + +         +   Q+ 
Sbjct: 528 LERQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQKRFNSERQQTT 587

Query: 453 AYKNTLKR 460
           +  +T+ R
Sbjct: 588 SQSSTISR 595



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 5/165 (3%)

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLN---SLLKALPNSDQTLSCSRYRLDRLPRELE 336
             Q     ++ +      R  K +             L    +     R       R  E
Sbjct: 385 EKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREE 444

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                    + R    I  + +++      +  RQ   E+ Q   ++ +Q  R    +++
Sbjct: 445 EAQRQAELDRQRREEEIQKQRQAEA-KRQAKLERQRREEEAQRQAELDRQR-REEEAQRQ 502

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            ++       E  K R        K    R E     + +     
Sbjct: 503 AELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR 547



 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 5/195 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D+ +      A + V ++E +Q        +      +  + ++       +      + 
Sbjct: 339 DIESIETEILAPIKVRLEEEVQRQKQAELEKQRREEEQQRQKQVELEKQHQEEEIQKQRQ 398

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
               R       R  E         + R       + + D      +  RQ  L++Q+  
Sbjct: 399 AEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEAQRQAELDRQRRE 458

Query: 381 EQIVKQHL----RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEFILSHKI 435
           E+I KQ      R   LE++ +        E  + R         +L   R E  +  + 
Sbjct: 459 EEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQR 518

Query: 436 KSCHTSVSITTRILQ 450
           ++     +   R  +
Sbjct: 519 QAEAKRQAKLERQRR 533


>gi|328883730|emb|CCA56969.1| Single-stranded DNA-binding protein [Streptomyces venezuelae ATCC
           10712]
          Length = 196

 Score = 41.3 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109
           KD  S  +   +W+     +    + G+  +V G++   ++        + Y++ +E + 
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|254391457|ref|ZP_05006659.1| single-stranded DNA-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294813712|ref|ZP_06772355.1| Single-stranded DNA-binding protein 1 [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442134|ref|ZP_08216868.1| single-stranded DNA-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197705146|gb|EDY50958.1| single-stranded DNA-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294326311|gb|EFG07954.1| Single-stranded DNA-binding protein 1 [Streptomyces clavuligerus
           ATCC 27064]
          Length = 197

 Score = 41.3 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109
           KD  S  +   +W+     +    + G+  +V G++   ++        + Y++ +E + 
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|242218009|ref|XP_002474799.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726047|gb|EED80010.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1244

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 66/214 (30%), Gaps = 15/214 (7%)

Query: 239  SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            + +  +    HE  ++  D   D R        +    +      S   L+ R    +  
Sbjct: 1041 ARVVCLDCDTHEKSFSTIDLCEDQRCMAAQVGLDRRSDLPTPHLPSHNVLKTRTMIHLRD 1100

Query: 299  LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
              K +   L +L +A  +S +        +             I   +          I+
Sbjct: 1101 FGKVERQALAALQRATASSAEVEEQKHELITHRLAGDRGQTRNINSGEQVCTACKGALIR 1160

Query: 359  SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              +  + I+  +Q   +++    ++     + I ++ +       M            ++
Sbjct: 1161 PCW--YCIECEKQATDKEESLEHRLDFWESKLIVMDSRIDEQGSEM------------NS 1206

Query: 419  HIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             + +L  R+   + +++      +    R+L++ 
Sbjct: 1207 RLVQLEMRLSK-VDNRLAQVDERLVHMERLLEAV 1239


>gi|328713962|ref|XP_001943041.2| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 1 [Acyrthosiphon pisum]
          Length = 5583

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499


>gi|328954373|ref|YP_004371707.1| metal dependent phosphohydrolase [Desulfobacca acetoxidans DSM
           11109]
 gi|328454697|gb|AEB10526.1| metal dependent phosphohydrolase [Desulfobacca acetoxidans DSM
           11109]
          Length = 337

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 57  LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108
           L D    I   +W     +     + G    V+G++ ++  + + Q+ I+ +
Sbjct: 40  LADKSGAIPCKVWSNVRQEFPGSFQTGDYVGVVGRVESY--NGELQLNIKKI 89


>gi|297699961|ref|XP_002827035.1| PREDICTED: centrobin-like isoform 1 [Pongo abelii]
          Length = 925

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +    +            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCALQEERDTARAGQLSEHQELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQATWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|294496570|ref|YP_003543063.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM
           5219]
 gi|292667569|gb|ADE37418.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM
           5219]
          Length = 710

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 13/92 (14%)

Query: 18  SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77
           SEL  ++  +       V + GE+   +   + G   F + D    I    ++    +  
Sbjct: 201 SELKDYVGKL-------VRIEGEVLQVKQ--TGGPTIFVISDEGGIIPCAAFESAGERAY 251

Query: 78  FLPEEGIEFLVIGKITTFPGSS-KYQIIIESL 108
              +  +   + G++          Q+ ++S+
Sbjct: 252 PDIDSDMVVSLTGEVNL---RGEDLQLEVKSM 280


>gi|169546403|ref|YP_001708789.1| single-stranded DNA binding protein [Paulownia witches'-broom
          phytoplasma]
 gi|148724156|gb|ABR08381.1| single-stranded DNA binding protein [Paulownia witches'-broom
          phytoplasma]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
          GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 25 GEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLRKGSKVYVEGSLSI 75


>gi|86610360|ref|YP_479122.1| chromosome segregation protein SMC [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558902|gb|ABD03859.1| putative chromosome segregation protein SMC [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 1188

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 58/190 (30%), Gaps = 12/190 (6%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A   +E   +  + L  +      + ++            L +   +L+  +    ++ +
Sbjct: 717 AAQAREKQLAQALLLARQDALQAQQYLERHQADCQKQQARLQHLQGSLAQRQSESHQIQQ 776

Query: 334 ELEHN------LEIIIFRKYRHFNHIIN---RIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
            L+        L+  +       + +           L   +Q+    + E QQ + Q+ 
Sbjct: 777 RLQQIQLRWDPLQQRLADLTLKLSQLEGSPVNQHWQQLQQTVQQQESRLAELQQQLTQLE 836

Query: 385 KQHLRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
           +Q          K+ +I       +++K R  YL   I +    +   +   +      +
Sbjct: 837 RQQQENSGQQHLKQAQIQHHQERLQESKQRQAYLQEQIVQAQATLGQ-IQQHLAEQRQQM 895

Query: 443 SITTRILQSF 452
           S     L   
Sbjct: 896 SQIEARLSHL 905



 Score = 40.1 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 67/218 (30%), Gaps = 4/218 (1%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS--CSRYRL 328
                       +  +  +EARL+++     + +        +      +  +    +   
Sbjct: 881  LGQIQQHLAEQRQQMSQIEARLSHLRQERDRQEFQLRAQQQQIQRLEWERYNALTQQQEK 940

Query: 329  DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQ 386
            + L  +L+  L+ +         ++   +  D L    +K  + +   +    +     +
Sbjct: 941  EALLAQLQTQLQAVAQELPDPLPNLPATLTLDELQRQKRKIEEQLRSLEPVNMLAIAEYE 1000

Query: 387  HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
              +    +   K+  LH  R +   RI    T  ++        ++   ++    +S   
Sbjct: 1001 QTQARLRDLSAKLETLHQERTELLLRIENFSTLRRQAFLDAFHAVNGHFQTIFAQLSDGD 1060

Query: 447  RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
              L+    ++    G T +       + +   ++   +
Sbjct: 1061 GHLELENPEDPFAGGLTLVAHPKGKPVRRLSAMSGGEK 1098



 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 49/162 (30%), Gaps = 11/162 (6%)

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
                 +      ++ I + ++      + L + L +    LS           +     
Sbjct: 758 QHLQGSLAQRQSESHQIQQRLQQIQLRWDPLQQRLADLTLKLSQLEGSPVNQHWQQLQQT 817

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                 +       + ++          + +Q     QQH++Q   QH +    E K++ 
Sbjct: 818 VQQQESRLAELQQQLTQL----------ERQQQENSGQQHLKQAQIQHHQERLQESKQRQ 867

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           A L     Q +  +  +  H+ +   ++   +  ++      
Sbjct: 868 AYLQEQIVQAQATLGQIQQHLAEQRQQMSQ-IEARLSHLRQE 908


>gi|156538593|ref|XP_001607521.1| PREDICTED: similar to CG11199-PA [Nasonia vitripennis]
          Length = 1187

 Score = 41.3 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 56/188 (29%), Gaps = 11/188 (5%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
                      Q + + L+  L   + +    +        ++L    + +S        
Sbjct: 280 LSKTQKDFLKAQDANVKLQRDLRENLAQKEDQEQRIATLEKRSLNAQREAISLH-----D 334

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L  +LE  L+    +       I        L     +    + E ++ ++Q ++   + 
Sbjct: 335 LKEKLEQELQHKTAQLKFQEEKIAALQAKLELTEQELQQFAKLPEMEEQLKQRMEALTQA 394

Query: 391 IFLE--KKEKIAILHMLREQTKNRIFYLHTHIKK---LITRIEFILSHKIKSCHTSVS-I 444
                  +++I  L    E+    +  L+  +K      TR+   +   +   +  +   
Sbjct: 395 QERHGSAEDRIQRLETQLEEKTAEVIRLNQRLKMNEEHNTRLSSTVDKLLSESNERLQVH 454

Query: 445 TTRILQSF 452
               + + 
Sbjct: 455 LKERMHAL 462


>gi|327202141|gb|AEA36714.1| single-stranded DNA binding protein [Periwinkle leaf yellowing
          phytoplasma]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75


>gi|222446338|dbj|BAH20799.1| single stranded DNA binding protein [Onion yellows phytoplasma]
 gi|327202128|gb|AEA36703.1| single-stranded DNA binding protein [Periwinkle leaf yellowing
          phytoplasma]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75


>gi|152988436|ref|YP_001350185.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7]
 gi|150963594|gb|ABR85619.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7]
          Length = 1211

 Score = 41.3 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/160 (6%), Positives = 41/160 (25%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
               K     L   L     +   L  +     +  ++ +  L+ +  ++          
Sbjct: 213 DEQRKQLEQRLEGSLPLAEQARTELESTLANHTQARQQEQQALQRLENQQQWFLEERRLA 272

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +  +     + + R          E + +           +++  L      ++ +    
Sbjct: 273 LSCEQAQRQLAEARHAWDGLAAERETLQQLERLAPVRGLLQRLEQLGQDLLLSQEQHRQQ 332

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
                    R+  + S   ++     +  + + ++     
Sbjct: 333 SQRHTAGSERLLQLQSQLHEARQRQAAAESTLREAQGPLR 372



 Score = 40.9 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 7/168 (4%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII------ 342
                     + ++  +    + ++ L     TL   + RL      L+H           
Sbjct: 863  RHTRAQDWQQALENAVQAAQATVETLQAPLDTLREEQLRLGEALEHLQHQQSRQQEERQR 922

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            +   ++ +      +    L   +        + ++H++Q+ ++  R   LE + +  + 
Sbjct: 923  LQADWQAWREGQENLDDSRLDALLALPDAQARQWREHLQQLQEEITRQRTLEAERQEQLQ 982

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
               R++ +     L   +++   R+       + +    +    +  +
Sbjct: 983  QHRRQRPELDHEALEDILRQQRERLAASEQAYLDAYSQ-LQADNQRRE 1029


>gi|18249854|ref|NP_543034.1| single-stranded DNA binding protein [Aster yellows phytoplasma]
 gi|18143627|dbj|BAB79698.1| single-stranded DNA binding protein [Aster yellows phytoplasma]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75


>gi|261884175|ref|ZP_06008214.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus
          subsp. venerealis str. Azul-94]
          Length = 45

 Score = 41.3 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHA 53
          +VSEL+   K ++E++   V V GEIS     HSSG  
Sbjct: 2  TVSELNEQAKALLETHKRIVEVTGEISRL-IRHSSGQW 38


>gi|169546409|ref|YP_001708794.1| single-stranded DNA binding protein [Paulownia witches'-broom
          phytoplasma]
 gi|148724162|gb|ABR08386.1| single-stranded DNA binding protein [Paulownia witches'-broom
          phytoplasma]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
          GEIS      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 25 GEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKVYVEGSLSV 75


>gi|156523116|ref|NP_001095972.1| serine/threonine-protein kinase MRCK gamma [Bos taurus]
 gi|151554127|gb|AAI49212.1| CDC42BPG protein [Bos taurus]
          Length = 1417

 Score = 41.3 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/245 (10%), Positives = 68/245 (27%), Gaps = 29/245 (11%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-YRHFNHIINRI 357
            ++ +   L+   + L    +    S+ RL+   RE E N E  I        +  ++R 
Sbjct: 634 RLQEENRRLSQEQERLMEELEREQQSKQRLEGERRETESNWEAQIADILSWVNDEKVSRG 693

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
               L   + +  + +               ++     ++  A   +  +     +    
Sbjct: 694 YLQALATKMAEELESLRNVGTQTLPSRPLDHQWKARRLQKMEASARLELQSA---LEAEI 750

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTL-----KRG---YTSIQDT 468
              + L  R+      ++    + +    +  Q+      TL      RG          
Sbjct: 751 RAKQGLQERLTQAQEAQL-RAESRLQEAEKRHQALQQELATLREELRARGPPD----TKP 805

Query: 469 NNNFI---------TQKRNL-ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
           +N+ I            ++   +   + +   +G+ +  +    P     T         
Sbjct: 806 SNSLIPFLSFRGSEDSAKDAGTSGEALELR-PEGRRSLRLGAVFPRTPAATTPPAESPPA 864

Query: 519 REKQG 523
           +    
Sbjct: 865 KPGSH 869


>gi|115636692|ref|XP_001190303.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115650720|ref|XP_790891.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1270

 Score = 41.3 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/200 (6%), Positives = 56/200 (28%), Gaps = 2/200 (1%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            D+  P       +    K     +     +      I     +        K       
Sbjct: 439 CDIHTPAEAEKKPIMKNDKVIEMDAAEKGWSAKKAKAISRKNMRKARKILAEKRAAMPVV 498

Query: 320 TL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
           ++    + R+ ++ +++    +    ++   +  +  + +    +    +        + 
Sbjct: 499 SIPCIPQQRISKILKKVTLQKKQHFMQRLVSYWTLKRQSRHGVPLLRRLQAHHQSQRNKD 558

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-EFILSHKIKS 437
            + +  ++  R     K  +     + R +    +      +K+   ++ +     +++ 
Sbjct: 559 SVSRESQKANRLKEQLKYWQRLRHDLERARLLVELIRKREKLKREQMKLSQKATDMQLQP 618

Query: 438 CHTSVSITTRILQSFAYKNT 457
            +  +  T   L+     N 
Sbjct: 619 FNILLQRTLAKLEEMDPLNI 638


>gi|20093597|ref|NP_613444.1| RecJ-like exonuclease [Methanopyrus kandleri AV19]
 gi|19886456|gb|AAM01374.1| Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn
           finger domain [Methanopyrus kandleri AV19]
          Length = 752

 Score = 41.3 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
           F+L+D    I    ++G   +     E G    VIG++TT     + Q+ I  + 
Sbjct: 255 FTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTH--DGQLQVEILDME 307


>gi|242205782|ref|XP_002468748.1| predicted protein [Postia placenta Mad-698-R]
 gi|220732133|gb|EED85971.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1237

 Score = 41.3 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/214 (10%), Positives = 65/214 (30%), Gaps = 15/214 (7%)

Query: 239  SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298
            + +  +    HE  ++  D   D R        +    +      S   L+ R    +  
Sbjct: 1034 ARVVCLDCDTHEKSFSTIDLCDDQRCMAAQVGLDRRSDLPTPHLPSHNVLKTRTMIHLRD 1093

Query: 299  LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
              K +   L +L +A  +  +        +             I   +          I+
Sbjct: 1094 FGKVERQALAALQRATASFAEVEEQKHELITHRLAGDRGQTRNINSGEQVCTACKGALIR 1153

Query: 359  SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
              +  + I+  +Q   +++    ++     + I ++ +       M            ++
Sbjct: 1154 PCW--YCIECEKQATDKEESLEHRLDFWESKLIVMDSRIDEQGSEM------------NS 1199

Query: 419  HIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             + +L  R+   + +++      +    R+L++ 
Sbjct: 1200 RLVQLEMRLSK-VDNRLAQVDERLVHMERLLEAV 1232


>gi|168756929|ref|ZP_02781936.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401]
 gi|189355999|gb|EDU74418.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401]
          Length = 1047

 Score = 41.3 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 43/163 (26%), Gaps = 16/163 (9%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW-- 296

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML------------REQTKN 411
             I ++R  +   +Q IE++  +    + L    +                     Q  +
Sbjct: 297 ERIAEHRAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356

Query: 412 RIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
           R    +  +     +     S +  ++     ++   + L + 
Sbjct: 357 RFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|297699963|ref|XP_002827036.1| PREDICTED: centrobin-like isoform 2 [Pongo abelii]
          Length = 903

 Score = 41.3 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +    +            S  + L      L   R    +   +L+ + + +    
Sbjct: 321 EAEQQRCCALQEERDTARAGQLSEHQELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQATWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|254417320|ref|ZP_05031063.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175858|gb|EDX70879.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 513

 Score = 41.3 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 41/118 (34%), Gaps = 3/118 (2%)

Query: 338 NLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
                +      +N       ++ + L   + + +  + + +Q +    +   R   L +
Sbjct: 203 AQRQRLQASQNEYNSRVAAADLEVEQLNRQLTQTQIQLADAEQVLAFNQQITDRLEKLWR 262

Query: 396 KEKIAILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +     L  LR++            +++   R+E  +    +    +++++   L++ 
Sbjct: 263 EGAFGELQYLRQKQDTDSSAAEVARLRQEQERLEKAIQQAQERKQNTMALSEEELRTL 320


>gi|195351251|ref|XP_002042148.1| GM10377 [Drosophila sechellia]
 gi|194123972|gb|EDW46015.1| GM10377 [Drosophila sechellia]
          Length = 696

 Score = 41.3 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +H      ++   L+ ++    +    TL +  +     +   S  R          +
Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395
            N       +         + +     H ++K R  +     QH+EQ  +   R I  + 
Sbjct: 358 RNERTRQRLQEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +++ L +  ++  N                   +           +   ++L + +  
Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472

Query: 456 NT 457
             
Sbjct: 473 AV 474


>gi|307329990|ref|ZP_07609142.1| single-strand binding protein [Streptomyces violaceusniger Tu 4113]
 gi|306884366|gb|EFN15400.1| single-strand binding protein [Streptomyces violaceusniger Tu 4113]
          Length = 201

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|291411235|ref|XP_002721898.1| PREDICTED: A-kinase anchor protein 13 [Oryctolagus cuniculus]
          Length = 2737

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 54/204 (26%), Gaps = 15/204 (7%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2392 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNATLVFTLKRNTEQVVQSIVHLHEL 2451

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R         + +       +++K RQ +   Q+  
Sbjct: 2452 LSTLQGVVLQQDSYIEDQKLVLSERPLTRGASRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2511

Query: 381  EQ------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR-------- 426
             Q        ++       E + + A L    EQ +     L    + L  R        
Sbjct: 2512 AQHAEERRRREREWEARERELQAREARLAEREEQVQRGQRDLEREREDLQQRKGAYQCDL 2571

Query: 427  -IEFILSHKIKSCHTSVSITTRIL 449
                    +++     +      L
Sbjct: 2572 EQLRAAQRQLEREQERLRRDAGRL 2595


>gi|302543992|ref|ZP_07296334.1| single-strand binding protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302461610|gb|EFL24703.1| single-strand binding protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 196

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|328713964|ref|XP_003245225.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 5 [Acyrthosiphon pisum]
          Length = 5304

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 306 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 365

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 366 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 422

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 423 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 482

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 483 EKLHQRWVNLRSLLHSKVLTPLATLS 508


>gi|328713960|ref|XP_003245224.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 4 [Acyrthosiphon pisum]
          Length = 5312

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 306 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 365

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 366 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 422

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 423 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 482

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 483 EKLHQRWVNLRSLLHSKVLTPLATLS 508


>gi|291244243|ref|XP_002742009.1| PREDICTED: kinesin family member 3B-like [Saccoglossus kowalevskii]
          Length = 1333

 Score = 41.3 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 4/145 (2%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHILEKQ 377
           Q L     +     +     LE       + F    +  K    L HNI+K RQ     Q
Sbjct: 817 QKLQSDYKKKVDAAKSKIKLLEKRQNDTEKIFKMQAHSEKKVSDLEHNIEKMRQQQELLQ 876

Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           + + +  ++  +     ++  +++  L +  EQ +  +      +     ++    +  +
Sbjct: 877 RRLREEAERKTKLEREMQRDQQRMKELEIRNEQQQKILKRKTEEVAAAQRKLRQGSAQMV 936

Query: 436 KSCHTSVSITTRILQSFAYKNTLKR 460
                 +    + L +   +  L+R
Sbjct: 937 GEDQHKLDEQRKWLDN-EVERVLER 960


>gi|220908912|ref|YP_002484223.1| exonuclease SbcC [Cyanothece sp. PCC 7425]
 gi|219865523|gb|ACL45862.1| exonuclease SbcC [Cyanothece sp. PCC 7425]
          Length = 1003

 Score = 40.9 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/181 (8%), Positives = 53/181 (29%), Gaps = 12/181 (6%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD-RLPRELEHNLEI 341
           +  I            + + ++         L      L      L  ++ ++    L+ 
Sbjct: 625 NHAIARGQVEYWRWAEVKQAELQQARKRQAQLAQQLPALEEQITILQTQIEQQQNSELQR 684

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR---------YIF 392
            I    +    +   ++    +    + +Q    + Q + +  + + +            
Sbjct: 685 QIEHLEQTLASLDYNLEYHHELRQTLRQQQIWTLRHQELLRAQQNYPQVQQSVQTLHQSL 744

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             +++++  +         ++   H H +++   +E  L    +     +S     LQ  
Sbjct: 745 QLRQQELGAIGEQMTNLTRQLAQTHDHSQRIRE-LETQLQADQQQREQKLSEL-GRLQQL 802

Query: 453 A 453
           +
Sbjct: 803 S 803



 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 61/172 (35%), Gaps = 3/172 (1%)

Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340
                          + +         N+L   L   +Q L+          +E   + +
Sbjct: 247 WHRQQQQNLHTEVERLQQQYTTACQQANTLFNLLQQQEQILAGYTRWHQLQEQEESLSAK 306

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
             +++  +     +   +++ L   ++   Q +  ++  IEQ  ++  + +    +   A
Sbjct: 307 FQLYQATQAQRQQLQHQQAEQL-RALKHQHQQLETQKTLIEQHQQELQQTLSRSDQVTTA 365

Query: 401 ILHMLREQTK-NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +  + R + + +R+  L T    L+ R +  L   +   H+ +S     L++
Sbjct: 366 LEELQRARVQLHRLDQLQTQAFPLLQR-QRELQLHLDRAHSRLSARLDELRA 416


>gi|169236237|ref|YP_001689437.1| hypothetical protein OE3155R [Halobacterium salinarum R1]
 gi|167727303|emb|CAP14089.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 682

 Score = 40.9 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 26  HIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84
             ++ ++   V V GEI+      +SG   F L D    +DA  +     +     E G 
Sbjct: 192 DALDDHVDDAVTVEGEIT--AARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGA 249

Query: 85  EFLVIGKITTFPGSSKYQI 103
              + G +         Q+
Sbjct: 250 VVQLTGTVE--RRRGDLQV 266


>gi|15790501|ref|NP_280325.1| hypothetical protein VNG1511C [Halobacterium sp. NRC-1]
 gi|10581003|gb|AAG19805.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
          Length = 684

 Score = 40.9 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 26  HIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84
             ++ ++   V V GEI+      +SG   F L D    +DA  +     +     E G 
Sbjct: 194 DALDDHVDDAVTVEGEIT--AARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGA 251

Query: 85  EFLVIGKITTFPGSSKYQI 103
              + G +         Q+
Sbjct: 252 VVQLTGTVE--RRRGDLQV 268


>gi|325182278|emb|CCA16732.1| myosinlike protein putative [Albugo laibachii Nc14]
 gi|325187295|emb|CCA21835.1| myosinlike protein putative [Albugo laibachii Nc14]
          Length = 1267

 Score = 40.9 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 103/364 (28%), Gaps = 38/364 (10%)

Query: 95  FPGSSKYQIIIES----LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150
           FP +S+ Q +I      ++    G L    +          L      +  PF+ ++   
Sbjct: 555 FPRTSRTQFLIRHYAAPVLYESVGFLEKHKDALLP-----DLSELMRGSCKPFLCELFKP 609

Query: 151 ITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210
           I S   A      Q    R    + +  V  Q  E  KE+   I   N       C +P+
Sbjct: 610 IESEKSA------QSGRKRGGGALTLTTVGTQFKESLKELMTTIQSTNVHYVR--CIKPN 661

Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270
            I  +        +       ++ AI  S     + + HE          D         
Sbjct: 662 AIKCSTTLNHEMVVSQLRCAGVIEAIRISRAAYPNRLQHEE-------ILDKFWLFVPEG 714

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +         Q     L   L        +   + +   L  L      L   R +   
Sbjct: 715 GKTP-------QDRCRLLMEHLELKTPEQYQMGKSRVYFQLGVLEE----LDDRRKKFLD 763

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ--HIEQIVKQHL 388
                   +     ++ ++   +   +K   +I  +   R++ +  +    ++   +   
Sbjct: 764 QKATKLQAIMKCFTQRLKYLRQLEAILKLQSVIRCVIAMRRYTIILRGFIRLQAQWRGVR 823

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFILSHKIKSCHTSVSITTR 447
                    +      ++   +         +++    R++     K++     V++  +
Sbjct: 824 ARRLATMMMRDKRAIAIQRNVRGYSKRRQYRLQRTNAIRLQAWTRMKLQRLKYLVALNEQ 883

Query: 448 ILQS 451
            LQ+
Sbjct: 884 KLQA 887


>gi|239630932|ref|ZP_04673963.1| ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527215|gb|EEQ66216.1| ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 1064

 Score = 40.9 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/278 (8%), Positives = 88/278 (31%), Gaps = 13/278 (4%)

Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI-AN 238
            ++  +   +  + +L+  + K       P+II     G S           +V +   +
Sbjct: 23  TIKFVQRADQTGSKVLKRTSFKVVGFVYSPEIISSINKGNSTSGSGDLKGYGVVTSNNFD 82

Query: 239 SSIPIISAIGH---ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
           S + +++ + +   +     +    D      T    +     +   +++        + 
Sbjct: 83  SDVYMMARLTYRNTKGLDPYSSQYTDRIQAHKTALNHLLQNAPQARLAAIKKQYQAKIDA 142

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
             + +      LN+  + L    Q L+ ++ ++    +EL+  ++    +       +  
Sbjct: 143 GQKKLDDAKAQLNAAQEQLTTGAQQLATAKQQVAAKQQELDAGVKNGQAQIASGETQLQQ 202

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                     + ++RQ ++  +Q +   Q          +  K+++       + ++ ++
Sbjct: 203 A------STQLSQSRQQLITAKQQLVAGQQQLDDKHQALVAAKQQLDAAKQQLDNSQQQL 256

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                 +              + +    ++   + L +
Sbjct: 257 ATAKQQLTTGQQ-QLNAKQQDLTTAKQQLNAAKQQLDA 293


>gi|328713966|ref|XP_003245226.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 6 [Acyrthosiphon pisum]
          Length = 5295

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499


>gi|328713958|ref|XP_003245223.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 3 [Acyrthosiphon pisum]
          Length = 5303

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499


>gi|258545882|ref|ZP_05706116.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258518898|gb|EEV87757.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 899

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 43/130 (33%), Gaps = 5/130 (3%)

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLIHNIQKNRQHILEKQQHIE 381
             R R          N+     R  R F+   N +      + +I   R+     +Q+ +
Sbjct: 7   QVRLRAFDQMSRTFANVGRAGQRLLRQFDQNRNTLHRFDAQLRDIGAYRRQQQAIRQNSQ 66

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            + +   R   L  + +             R+   +   ++ ++++E   S         
Sbjct: 67  DLTQMRQRVRDLHNQLRNGAAMGQSTAAMRRLRDEYNRARQSVSQLEQTRSR----EQQR 122

Query: 442 VSITTRILQS 451
           ++  ++ L++
Sbjct: 123 LAQLSQRLRA 132



 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/181 (8%), Positives = 49/181 (27%), Gaps = 3/181 (1%)

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329
            AE+ + V+      +    A +     RL++      N+L +         +  R +  
Sbjct: 1   MAELNLQVRLRAFDQMSRTFANVGRAGQRLLRQFDQNRNTLHRFDAQLRDIGAYRRQQQA 60

Query: 330 -RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
            R   +    +   +   +    +     +S   +  ++       +    +EQ  +   
Sbjct: 61  IRQNSQDLTQMRQRVRDLHNQLRNGAAMGQSTAAMRRLRDEYNRARQSVSQLEQ-TRSRE 119

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +    +  +++    +      +    L     +    +       ++            
Sbjct: 120 QQRLAQLSQRLRAAGIDTRNLASAEARLRREAGQTNDALNRQADR-LRRLAERQRQAEAR 178

Query: 449 L 449
           L
Sbjct: 179 L 179


>gi|328713956|ref|XP_003245222.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms
           1/2/3/5-like isoform 2 [Acyrthosiphon pisum]
          Length = 5324

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D   P+     +         ++  +    R    ++ L K       ++ +     +
Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                     +RL    +   +  I  + +    +    +        ++    + E + 
Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435
            I +  ++  R   L+ K     L      +++ I  L   ++ L   R      L  ++
Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473

Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459
           +  H        +L S       TL 
Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499


>gi|260783656|ref|XP_002586889.1| hypothetical protein BRAFLDRAFT_129914 [Branchiostoma floridae]
 gi|229272018|gb|EEN42900.1| hypothetical protein BRAFLDRAFT_129914 [Branchiostoma floridae]
          Length = 479

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 7/193 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           +L     +          + LQ+ +   E+ +  + ++L +Y+ N    +L+      Q 
Sbjct: 150 NLEHAKQSKGKNAMTEKYKELQAQIQRNESIIQMLQMQLKEYQENADVKVLR------QQ 203

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +   R +++         LE       R  +  +   KS  L    Q  R+    ++Q +
Sbjct: 204 IEELRAQMESDKATNRRMLEKQRLDLERQMHEQVKNAKSSALSQAQQLAREAEEAEKQRL 263

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTK-NRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++  Q  R   L  K++ ++      + +  R+  L     + I R++  L    ++  
Sbjct: 264 REMEAQKRRQQELMAKQEASMASNSSAEEEVKRLKKLEMKQAEEIARLKKDLDRTNRTWE 323

Query: 440 TSVSITTRILQSF 452
              +I  + L + 
Sbjct: 324 KKFAILKQSLHAL 336


>gi|154311020|ref|XP_001554840.1| hypothetical protein BC1G_06628 [Botryotinia fuckeliana B05.10]
 gi|150851032|gb|EDN26225.1| hypothetical protein BC1G_06628 [Botryotinia fuckeliana B05.10]
          Length = 587

 Score = 40.9 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 23/300 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   E  +  +   E  F             N +            
Sbjct: 273 LRLTVVDTPGFGDFVNNDESWRPIVDNIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 332

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E   A    + +          I  
Sbjct: 333 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAAFK--SRILADIKHHDIQIFE 390

Query: 214 LARGGGSIEDLWHFNDEMI-----VRAIANSSIPIISA---IGHETDWTLA--DYAADLR 263
                   E+    N E++         ANS I         G +  W     D      
Sbjct: 391 GPHYEKDDEETIAENKEIMDKVPFAVVGANSEITNSEGRKVRGRKYPWGTIEVDNEEHCD 450

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   +  +  +   +   +   +      ++    
Sbjct: 451 FVKLRQMLIRTHMEELKEHTNNALYENYRSEKLTAMGVTQDPNVFKEVNPAVKQEEERQL 510

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          + +    +   +++ RQ + EK+  +E
Sbjct: 511 HEQKLAKMEAEMKMVFQQKVAEKESKLKQSEEELYARHREMKEQLERQRQELEEKKSRVE 570


>gi|301614628|ref|XP_002936790.1| PREDICTED: switch-associated protein 70 [Xenopus (Silurana)
           tropicalis]
          Length = 563

 Score = 40.9 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/204 (9%), Positives = 58/204 (28%), Gaps = 6/204 (2%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
            + P P   A            +      +    +    + K   L  + K L  +    
Sbjct: 286 FQLPPPHKEARQKRRALRKKLLAEQEEMEKKMKELQVANETKQQELEVMRKELKEAADRA 345

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQHI 380
                +      +L+   +  + R+      +  ++           NR + + E  + +
Sbjct: 346 MEEERKRQETQTQLQDRFQTEMERELLIRRQMEAQVAQKSNELQQNLNRVRELEEMYRKL 405

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-----IFYLHTHIKKLITRIEFILSHKI 435
           ++ +    +    E+  ++    +L E+   R     +        K+    +  L    
Sbjct: 406 QEALDDEKQARQEEENARLHQARLLEEEAAKRAMLEKLHKEQETAIKMTEAEKKELEQIR 465

Query: 436 KSCHTSVSITTRILQSFAYKNTLK 459
           +    ++    + L+    +  L 
Sbjct: 466 EEKEKALQEAMQQLEQLEKERILA 489


>gi|206562276|ref|YP_002233039.1| hypothetical protein BCAM0413 [Burkholderia cenocepacia J2315]
 gi|198038316|emb|CAR54271.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 449

 Score = 40.9 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 26/198 (13%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
             LS      +R        LE      +        R+       +     +  L   +
Sbjct: 171 HMLSHLVGAANRADIRRLVALERENAELHAKLERQQARLHEMSTQRDAALQERDALHAHR 230

Query: 379 HIEQIVK--------QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           H   +            LR     + E++A+    RE  + RI       + +  R++ +
Sbjct: 231 HAPPLAAESVLRDEVHALREALAARDERLALHTSRREAAEQRIAAEQASARAMRARLDDL 290

Query: 431 LSHKIKSCHTSVSITTRILQSF--AY-------KNTLKRG----YTSIQDTNNNFITQKR 477
           +   +K+     S   + +Q+             + L RG    Y   +  +N  I +  
Sbjct: 291 M-AMVKTLRAEASALEQAVQASTDDPAEHAAHSLSIL-RGTRVVYVGGRPGSNRAIRRIV 348

Query: 478 NLATKTRILINFFDGQAN 495
             A      +   DG   
Sbjct: 349 ETAGGE---VTLHDGGIE 363


>gi|239980815|ref|ZP_04703339.1| single-stranded DNA-binding protein [Streptomyces albus J1074]
 gi|291452674|ref|ZP_06592064.1| single-stranded DNA-binding protein 2 [Streptomyces albus J1074]
 gi|291355623|gb|EFE82525.1| single-stranded DNA-binding protein 2 [Streptomyces albus J1074]
          Length = 197

 Score = 40.9 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|195578928|ref|XP_002079314.1| GD23884 [Drosophila simulans]
 gi|194191323|gb|EDX04899.1| GD23884 [Drosophila simulans]
          Length = 696

 Score = 40.9 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +H      ++   L+ ++    +    TL +  +     +   S  R          +
Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395
            N       +         + +     H ++K R  +     QH+EQ  +   R I  + 
Sbjct: 358 RNERTRQRLQEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +++ L +  ++  N                   +           +   ++L + +  
Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472

Query: 456 NT 457
             
Sbjct: 473 AV 474


>gi|86606057|ref|YP_474820.1| hypothetical protein CYA_1387 [Synechococcus sp. JA-3-3Ab]
 gi|86554599|gb|ABC99557.1| conserved domain protein [Synechococcus sp. JA-3-3Ab]
          Length = 618

 Score = 40.9 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 51/160 (31%), Gaps = 6/160 (3%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-R 356
              +     +  L + L       S     L    +  +  LE +    +         +
Sbjct: 256 EQHRAAQQRIQELEEQLRAQQDRGSAQVQALAEQLQAAQAELETLRRHCHELTEWQSQAK 315

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           +K   L   +Q+++Q   + +Q +E  +     L     E++ ++ +    + +    + 
Sbjct: 316 LKLQELGSRLQQHQQAEAQLRQALEHKEAELAALSQSLQEQQHQLQVAQSTKARLIADLA 375

Query: 415 YLHTHIKKLITRIE---FILSHKIKSCHTSVSITTRILQS 451
           +      + I R+         +++     +      LQ+
Sbjct: 376 HARQEASQTIHRLRGELQEAQTQLQVTQERLQEVQAQLQA 415


>gi|291400707|ref|XP_002716758.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 1254

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 645 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 704

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 705 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 762

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-----YKN 456
           +  L++Q  + +          +     ++   ++    ++    +   S +       N
Sbjct: 763 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 821

Query: 457 --TLKRGY 462
             TLK GY
Sbjct: 822 PSTLKEGY 829


>gi|328772569|gb|EGF82607.1| hypothetical protein BATDEDRAFT_86540 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1169

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/169 (7%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
             +   ++LE +L +     +  +      L +      +     + R   L    +   
Sbjct: 714 EDRQHELDLEQQLQHEFEEKLHQERQAWKELQQQREQDPERQHERQQRRKMLEERHKQEH 773

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                R+ +     + +           ++RQ  ++ ++ +++  +++ +    + K+K+
Sbjct: 774 HKKKEREEKQRQKELEQQPELEQRLQEFESRQRSIQLEKMLDRDFEENFKKQGRKLKQKL 833

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                 ++  + +               +     K +          + 
Sbjct: 834 E--KERQQNPEEQHERQQRRKGSEERHKQEHHKKKEREEKQRQKELEQQ 880



 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/185 (5%), Positives = 54/185 (29%), Gaps = 3/185 (1%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
               +     +   +S  +      +       + +        +   N ++     + R
Sbjct: 792 PELEQRLQEFESRQRSIQLEKMLDRDFEENFKKQGRKLKQKLEKERQQNPEEQHERQQRR 851

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
                R  + + +     + +    +  + + +       ++RQ  ++ ++ +++  +++
Sbjct: 852 KGSEERHKQEHHKKKEREEKQRQKELEQQPELE-QRLQEFESRQRSIQLEKMLDRDFEEN 910

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
            +    + K+K+      ++  + +               +     K +          +
Sbjct: 911 FKKQGRKLKQKLE--KERQQNPEEQHERQQRRKGSEERHKQEHHKKKEREEKQRQKELEQ 968

Query: 448 ILQSF 452
            LQ  
Sbjct: 969 RLQEL 973


>gi|282900460|ref|ZP_06308409.1| hypothetical protein CRC_01828 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194653|gb|EFA69601.1| hypothetical protein CRC_01828 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 363

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/159 (9%), Positives = 50/159 (31%), Gaps = 2/159 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
             L  +  + I    +       +   +L    +  +          ++    + +   R
Sbjct: 119 NELHEQSGDPITNESEKLAQEFRNFADSLTVIHRRYAQEISNASESFQDHLQRVAVAYER 178

Query: 346 KYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
               +   +NR+      L   ++ ++Q  ++ Q    Q   +    +   ++  I   +
Sbjct: 179 MLDTYELQLNRLNKKHSELSEQLETSQQKFIDTQSRYYQKHSELSEQLETSQQRFIDNQN 238

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
               Q +N I    + +    + +   L +++++     
Sbjct: 239 RYYLQMENAIEAQLSRLIAKHSELYNQLDNQLETSQQRF 277


>gi|118082455|ref|XP_416120.2| PREDICTED: similar to PTPRF interacting protein alpha 2 [Gallus
           gallus]
          Length = 1253

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 33/351 (9%), Positives = 97/351 (27%), Gaps = 19/351 (5%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 223

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++  I     +G    + I          ++  +    D          +++L    +
Sbjct: 224 AHIQRKI--AAGEGPAESEHIEGMEPGQKVHEKRLSNGSIDSNDETSQVIELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             + +               E    L+    ++     T   E+    + + +      E
Sbjct: 282 YEMAQMK-------------ERMAALSSRVGEVEQEAETARKELIKTEEMNSKYQRDIRE 328

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           A      +      +       +    S   ++            +   LE    +    
Sbjct: 329 AMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQLEDKNRQLQER 388

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408
                 +++    +   +   +   E  Q I  + K   R+  +E++ +     +  + Q
Sbjct: 389 LELAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 446

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
              R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 447 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|156399738|ref|XP_001638658.1| predicted protein [Nematostella vectensis]
 gi|156225780|gb|EDO46595.1| predicted protein [Nematostella vectensis]
          Length = 543

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/180 (9%), Positives = 63/180 (35%), Gaps = 3/180 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           ++  PV+   +    +  A   + I    +  +   N  +    +  Q  +  R +    
Sbjct: 364 KILEPVRLLWRRVEDHEFAYAISCIESAYEELMIEFNKNIHGCRDICQDFAYFRQQELDR 423

Query: 332 PRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             + E   +  + FR  +   + + R  ++     +   +  + ++     ++++  +R 
Sbjct: 424 EMKKEVDWIRKMCFRNDQIMANKLARKDTEDEARRLGMMKLRLDQEMD--LKVMEAEMRE 481

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                 E++A +    ++   +        + ++ R E  +  +++     +    + L+
Sbjct: 482 EQRLLNEELAEMVRREKERGAQDNNYLRRRQDILQRGEQAMRRQLREREKEIEEARKRLE 541


>gi|73951388|ref|XP_536182.2| PREDICTED: similar to A-kinase anchor protein 13 isoform 2 [Canis
            familiaris]
          Length = 2786

 Score = 40.9 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/205 (8%), Positives = 58/205 (28%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         L++++ +  + 
Sbjct: 2441 DSHQMNASKGGEKEEGEDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQLVQSVIHLHEL 2500

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R     +   + +       +++K RQ +   Q+  
Sbjct: 2501 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2560

Query: 381  EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q +++  R             E++ ++A       + +  +      ++          
Sbjct: 2561 AQHLEEKRRREREWEARERALQEREARLAQREQDVWRGQQDLDREREELQHKKGAYQCDL 2620

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +      L
Sbjct: 2621 ERLRTA-QKQLEREQEQLKRDAERL 2644


>gi|189031481|sp|A4IFI1|CC157_BOVIN RecName: Full=Coiled-coil domain-containing protein 157
          Length = 688

 Score = 40.9 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
           D       P  T     A   K+      L+ L                  +  L +AL 
Sbjct: 260 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 319

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
                        ++   + E   + ++          +  ++ +               
Sbjct: 320 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 378

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q   E   +          ++++ +L    +    +I +  T + K   R++ ++ H+ 
Sbjct: 379 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 437

Query: 436 KSCHTSVSITTRILQSFA 453
           +S         + L S  
Sbjct: 438 ESLQAKQRALLQQLDSLD 455


>gi|331085071|ref|ZP_08334158.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408771|gb|EGG88236.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 685

 Score = 40.9 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 17/93 (18%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL--------------KD 59
            ++V +L  +     +     V + GEI   +     G  Y +L              KD
Sbjct: 26  VFTVGDLIRYFPRGYDVYDPPVSI-GEIQEQKVQAVRGMIYGTLQVSSRGAQVTSGYLKD 84

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
               I  + ++  +  +    + G   ++ G++
Sbjct: 85  MTGTIKVVWYR--MPFLRNTLQNGQIVILRGRV 115


>gi|257387954|ref|YP_003177727.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170261|gb|ACV48020.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 636

 Score = 40.9 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 10/113 (8%)

Query: 35  VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW--KGTLNKIEFLPEEGIEFLVIGKI 92
           V VRGE+   +   + G   F L+D    +    +   G           G    V G++
Sbjct: 124 VTVRGEVLQIKQ--TGGPTIFQLRDESGVVPCAAFDEAGVRAFPAVDL--GDVAEVTGRV 179

Query: 93  TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145
                +   Q+ ++ L   G G    A+     + L+E        +P+   P
Sbjct: 180 E--SRNGGVQVEVDELTVLG-GDRERAVRDDIDEALDEAA-EPADIDPLVEWP 228


>gi|161504420|ref|YP_001571532.1| exonuclease subunit SbcC [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865767|gb|ABX22390.1| hypothetical protein SARI_02531 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 1046

 Score = 40.9 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 48/166 (28%), Gaps = 14/166 (8%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            +T    L  L   ++  +  R R   L    E   +               +++  +  
Sbjct: 239 QHTQQQHLHWLTRKNELHAELRARQQSLYEAQEAREKAQPQLAALTLAQPARQLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK------NR 412
                  +++ RQ I E    ++   +  LR I      +   L   R++ K      + 
Sbjct: 299 IQEQTTAVERVRQQINEVNARLQSAYRLRLR-IRACAYRQFTQLDATRQRLKTWLTEHDG 357

Query: 413 IFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQSFAYKN 456
           I    + +      +  +     ++      +   TR L +     
Sbjct: 358 IRVWRSELAGWRALLTQQSNERAQLSQWQRQLMSDTRQLDALPPLA 403



 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 46/139 (33%), Gaps = 7/139 (5%)

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH-ILEKQQ 378
            L+  + +      +   + E  +          ++ +     +H   + RQ  + E Q+
Sbjct: 212 LLAEEQLQQLVASLQALTDEEKRLLASQHTQQQHLHWLTRKNELHAELRARQQSLYEAQE 271

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-- 436
             E+   Q       +   ++       ++    +  +   I ++  R++     +++  
Sbjct: 272 AREKAQPQLAALTLAQPARQLRPHWERIQEQTTAVERVRQQINEVNARLQSAYRLRLRIR 331

Query: 437 ----SCHTSVSITTRILQS 451
                  T +  T + L++
Sbjct: 332 ACAYRQFTQLDATRQRLKT 350


>gi|168786234|ref|ZP_02811241.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869]
 gi|189373584|gb|EDU92000.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|320656009|gb|EFX23925.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662566|gb|EFX29955.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. USDA 5905]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|291281300|ref|YP_003498118.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615]
 gi|209744260|gb|ACI70437.1| ATP-dependent dsDNA exonuclease [Escherichia coli]
 gi|290761173|gb|ADD55134.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|209744254|gb|ACI70434.1| ATP-dependent dsDNA exonuclease [Escherichia coli]
 gi|320643765|gb|EFX12888.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. 493-89]
 gi|320649116|gb|EFX17694.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. H 2687]
 gi|320665136|gb|EFX32229.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. LSU-61]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|158259613|dbj|BAF85765.1| unnamed protein product [Homo sapiens]
          Length = 903

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L        +   +L+ + + +    
Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEEWQTWAQQEHQLKEHYQALQEES 380

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489


>gi|154149742|ref|YP_001403360.1| hypothetical protein Mboo_0194 [Candidatus Methanoregula boonei
           6A8]
 gi|153998294|gb|ABS54717.1| domain of unknown function DUF1743 [Methanoregula boonei 6A8]
          Length = 407

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 34  HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGK 91
              VRG ++G       GH  F+++DN + I  + ++      +I      G E +  G 
Sbjct: 258 SYRVRGVVTGRPVTGEGGHVSFAIRDNEAEIRCMAYEPTKNFREIIRALVPGDEIIAAGS 317

Query: 92  ITTFPGSSKYQIIIESL 108
              +       I +E +
Sbjct: 318 ---YKKG---SINLEKI 328


>gi|15800123|ref|NP_286135.1| exonuclease subunit SbcC [Escherichia coli O157:H7 EDL933]
 gi|168749849|ref|ZP_02774871.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113]
 gi|168761593|ref|ZP_02786600.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501]
 gi|168768338|ref|ZP_02793345.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486]
 gi|168776307|ref|ZP_02801314.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196]
 gi|168783253|ref|ZP_02808260.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076]
 gi|168800270|ref|ZP_02825277.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508]
 gi|195938542|ref|ZP_03083924.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. EC4024]
 gi|208806791|ref|ZP_03249128.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206]
 gi|208814881|ref|ZP_03256060.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045]
 gi|208823003|ref|ZP_03263321.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042]
 gi|209396784|ref|YP_002269034.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115]
 gi|217326260|ref|ZP_03442344.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588]
 gi|254791575|ref|YP_003076412.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. TW14359]
 gi|261223873|ref|ZP_05938154.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256413|ref|ZP_05948946.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str.
           FRIK966]
 gi|12513240|gb|AAG54743.1|AE005218_8 ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str.
           EDL933]
 gi|187768269|gb|EDU32113.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196]
 gi|188015846|gb|EDU53968.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113]
 gi|188999354|gb|EDU68340.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076]
 gi|189362387|gb|EDU80806.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486]
 gi|189368061|gb|EDU86477.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501]
 gi|189377379|gb|EDU95795.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508]
 gi|208726592|gb|EDZ76193.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206]
 gi|208731529|gb|EDZ80217.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045]
 gi|208737196|gb|EDZ84880.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042]
 gi|209158184|gb|ACI35617.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115]
 gi|209744256|gb|ACI70435.1| ATP-dependent dsDNA exonuclease [Escherichia coli]
 gi|209744258|gb|ACI70436.1| ATP-dependent dsDNA exonuclease [Escherichia coli]
 gi|209744262|gb|ACI70438.1| ATP-dependent dsDNA exonuclease [Escherichia coli]
 gi|217322481|gb|EEC30905.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588]
 gi|254590975|gb|ACT70336.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str.
           TW14359]
 gi|320192807|gb|EFW67447.1| Exonuclease SbcC [Escherichia coli O157:H7 str. EC1212]
 gi|320638385|gb|EFX08099.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. G5101]
 gi|326341154|gb|EGD64946.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1044]
 gi|326346070|gb|EGD69809.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1125]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|15829701|ref|NP_308474.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. Sakai]
 gi|13359904|dbj|BAB33870.1| ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str.
           Sakai]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|163916357|gb|AAI57670.1| LOC100135363 protein [Xenopus (Silurana) tropicalis]
          Length = 599

 Score = 40.9 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/204 (9%), Positives = 58/204 (28%), Gaps = 6/204 (2%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
            + P P   A            +      +    +    + K   L  + K L  +    
Sbjct: 322 FQLPPPHKEARQKRRALRKKLLAEQEEMEKKMKELQVANETKQQELEVMRKELKEAADRA 381

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQHI 380
                +      +L+   +  + R+      +  ++           NR + + E  + +
Sbjct: 382 MEEERKRQETQTQLQDRFQTEMERELLIRRQMEAQVAQKSNELQQNLNRVRELEEMYRKL 441

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-----IFYLHTHIKKLITRIEFILSHKI 435
           ++ +    +    E+  ++    +L E+   R     +        K+    +  L    
Sbjct: 442 QEALDDEKQARQEEENARLHQARLLEEEAAKRAMLEKLHKEQETAIKMTEAEKKELEQIR 501

Query: 436 KSCHTSVSITTRILQSFAYKNTLK 459
           +    ++    + L+    +  L 
Sbjct: 502 EEKEKALQEAMQQLEQLEKERILA 525


>gi|76802252|ref|YP_327260.1| hypothetical protein NP3224A [Natronomonas pharaonis DSM 2160]
 gi|76558117|emb|CAI49703.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 635

 Score = 40.9 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 35  VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           V + G+I   +     G   FSL+D    +    ++    +     E      + G + T
Sbjct: 124 VHLEGDIVQIKQTA--GPTIFSLRDGDGVVPCAAFESAGVRAYPAVELDDTVRITGAVET 181

Query: 95  FPGSSKYQIIIESL-IPSGSGTLLTALE 121
                  Q+ ++ L    G        E
Sbjct: 182 HE--GALQLEVDKLVRLRGEAADEVRTE 207


>gi|318040328|ref|ZP_07972284.1| secreted protein MPB70 precursor-like [Synechococcus sp. CB0101]
          Length = 576

 Score = 40.9 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/179 (7%), Positives = 43/179 (24%), Gaps = 4/179 (2%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPR 333
            P  +   S  +   +      +              +      Q  +            
Sbjct: 218 TPEGQAWLSQPVQSLSAQQWQALWEHWQSWLQAMEQQRFGFTPGQCCAYRCWQAPAPAGS 277

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                L I       H   + +R          Q+  Q +  ++  +E   +   +    
Sbjct: 278 AAPEPLAINQALASYHQQRLGSRQVQQRQHQLRQRLEQLLQRERSQMEHQQQLLDQVENS 337

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTRIL 449
           ++ ++ A   +   Q           + K   ++      ++ +++     +      L
Sbjct: 338 DQLQQQADALLCLPQPSRDQVAEAQKLYKRARKLRRSVAAITPRLEQHRQRIEQLETSL 396


>gi|320102047|ref|YP_004177638.1| hypothetical protein Isop_0494 [Isosphaera pallida ATCC 43644]
 gi|319749329|gb|ADV61089.1| protein of unknown function DUF820 [Isosphaera pallida ATCC 43644]
          Length = 320

 Score = 40.9 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%)

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
            ++     H  ++ RQ   E Q+  EQ  +         ++E+ A     R+  + R   
Sbjct: 206 FLEEAEARHQAERERQARAEAQRQAEQERQARAEAQRQAEQERQARAEAQRQAEQERQAR 265

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                +    R     + +       ++     L +
Sbjct: 266 AEAQRQAEQERQARAEAQRQAEEARRLAEEQARLIA 301



 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 1/106 (0%)

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
           E+ +            R          ++ RQ   E Q+  EQ  +         ++E+ 
Sbjct: 204 EVFLEEAEARHQAERERQARAEAQRQAEQERQARAEAQRQAEQERQARAEAQRQAEQERQ 263

Query: 400 AILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTSVSI 444
           A     R+  + R          +   R+    +  I      +  
Sbjct: 264 ARAEAQRQAEQERQARAEAQRQAEEARRLAEEQARLIAELQARLRQ 309


>gi|300698136|ref|YP_003748797.1| transmembrane protein, DUF802 [Ralstonia solanacearum CFBP2957]
 gi|299074860|emb|CBJ54428.1| putative transmembrane protein, DUF802 [Ralstonia solanacearum
           CFBP2957]
          Length = 698

 Score = 40.9 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D                   + +       NL   +   +              L    
Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSANLLEGVAARLDTTASRMSQAWTEALSQQD 399

Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +   L+    R                   L +        +  R  +      + + S
Sbjct: 400 QTHAQLTGHHQRALEAATATFEQHAVTLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459

Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
               L     +        QQ     + +              + IA +  L +      
Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAEMSRLVQAASEAP 519

Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470
                 + +L  ++   +      ++     ++    +L +  + +T +R        + 
Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574

Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502
              T    L    R+   F D         G A A V   A
Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612


>gi|189501758|ref|YP_001957475.1| ATP-dependent DNA helicase RecG [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497199|gb|ACE05746.1| hypothetical protein Aasi_0311 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 695

 Score = 40.9 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 11/135 (8%)

Query: 56  SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP----- 110
           +LKD    I  + ++     ++     GI + + GK T +  +S Y I+   +       
Sbjct: 84  TLKDETGVISLVWFQKINGILK-QLRPGILYQLFGKPTVY--NSCYTIVHPEMEIFTAQT 140

Query: 111 ---SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167
                   +    EK K   ++         N I   P  +             I+ + +
Sbjct: 141 TQEKTLIPVYHTTEKLKASYIDSKYIRRVQANLIEQFPIHLPETLPEDLCAQYKIIDKKT 200

Query: 168 CRFPLRVIIFPVKVQ 182
               +     P  +Q
Sbjct: 201 ALANIHFPATPEILQ 215


>gi|283782434|ref|YP_003373189.1| metal dependent phosphohydrolase [Pirellula staleyi DSM 6068]
 gi|283440887|gb|ADB19329.1| metal dependent phosphohydrolase [Pirellula staleyi DSM 6068]
          Length = 324

 Score = 40.9 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 49  SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
            +G+ Y  L+  D    +  ++W     ++    E G    V G    +  +   Q+I+ 
Sbjct: 30  RNGNLYLQLRMTDKTGSLTGMLW-NVTEQLGQSVEVGHYLRVQGTTQLY--NGGMQMIVT 86

Query: 107 SLIPS 111
            + P 
Sbjct: 87  RIDPV 91


>gi|260866556|ref|YP_003232958.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str.
           11128]
 gi|257762912|dbj|BAI34407.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str.
           11128]
 gi|323178341|gb|EFZ63919.1| exonuclease sbcC [Escherichia coli 1180]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQRIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|260853617|ref|YP_003227508.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str.
           11368]
 gi|257752266|dbj|BAI23768.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str.
           11368]
 gi|323152136|gb|EFZ38429.1| exonuclease sbcC [Escherichia coli EPECa14]
          Length = 1047

 Score = 40.9 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQRIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|208022624|ref|NP_001101253.2| kinesin family member 16B [Rattus norvegicus]
          Length = 1311

 Score = 40.9 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
            A  +  P  E  +     LE   +   +     +    +     L    Q +   R   
Sbjct: 587 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 644

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           + + R++    E +  R +   N + + +         +   Q  LE+Q+  E+     +
Sbjct: 645 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 704

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444
           R      +E  +     + Q    + +LH        ++  +   +++         V+ 
Sbjct: 705 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 763

Query: 445 TTRILQ 450
               L+
Sbjct: 764 LEEQLR 769


>gi|291410931|ref|XP_002721755.1| PREDICTED: apoptosis-stimulating protein of p53, 1 [Oryctolagus
           cuniculus]
          Length = 1086

 Score = 40.9 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/215 (6%), Positives = 57/215 (26%), Gaps = 17/215 (7%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D AA  +    +    +    +            + +      ++     + +    L
Sbjct: 128 LQDMAARQQQQIESQQQMLVAKEQRLHFLKQQERRQQQSLSENEKLQKLKERVEAQENKL 187

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                             + +  NL   + R    F      +++  L   + +  Q + 
Sbjct: 188 KKIRAM-----RGQVDYSKIMNGNLSAEVERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 240

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430
           + ++      + +   +      ++  L+   +         ++ +++    +       
Sbjct: 241 DLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRTAEV 300

Query: 431 --LSHKIKSCHTSVSITTRILQ----SFAYKNTLK 459
             +  +I      +      L     + + ++ L 
Sbjct: 301 AMMDRRIGELRERLYGKKAQLTRVNGTSSPQSPLS 335


>gi|260434986|ref|ZP_05788956.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109]
 gi|260412860|gb|EEX06156.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109]
          Length = 1202

 Score = 40.9 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
           +   Q+     +               + L++       ++  +  SR RL  +      
Sbjct: 344 QAQRQNLATRRQQWQLQSRELERDPHQDALSAANDNCKAAEAAVEISRRRLADVVGRSGA 403

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--K 395
            +E    R  R      +      L+   Q  ++ + ++++ +E++ ++  +        
Sbjct: 404 WVEEQKRRSGRRQELQSSVTP---LLEEHQLLQERLRQERERLEELTQEQHQDGTDGDAV 460

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451
           ++++A L    +     I      +++    +  +     +++   T +      L+S
Sbjct: 461 EQQLATLEATWQNLLQAIADGKQELQQTAESLAIQQRTRSRLEQEQTRLEREIARLES 518



 Score = 40.1 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 79/257 (30%), Gaps = 17/257 (6%)

Query: 244  ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
            I  +G + +   A+      A     +A  A   ++           +    +      +
Sbjct: 861  IERLGDQENALAAEETRLQEAVKALASAHGAWRQQQSDLQEKRKELEQQQTDLQERFGSQ 920

Query: 304  INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                ++    +    Q L  + + L+RL  + E  +E            +   +      
Sbjct: 921  RRARDAAEAEVGRQRQALQQAEWNLERLKEDREGLIEEQ-RSGAVRLQEMEQALPDPRPE 979

Query: 364  HN-------IQKNRQHILEKQQHIEQIVKQHLRYIFLEKK---------EKIAILHMLRE 407
                     ++  +  +   QQ +E +   ++  +   +          E++ +L+  RE
Sbjct: 980  IPEALQLAGLEALQTDLQAIQQRMEALEPVNMLALEELEALEERLNELNERLDVLNNERE 1039

Query: 408  QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467
            +   RI  + T  +         +    +    S+S     LQ    +  L+ G T +  
Sbjct: 1040 ELLLRIETVATLRQDAFMEAFTAVDGHFREIFASLSDGDGHLQLENPEEPLEGGLTLVAH 1099

Query: 468  TNNNFITQKRNLATKTR 484
                 + +  +++   +
Sbjct: 1100 PKGKTVRRLASMSGGEK 1116


>gi|149041259|gb|EDL95192.1| kinesin family member 16B (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1297

 Score = 40.9 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
            A  +  P  E  +     LE   +   +     +    +     L    Q +   R   
Sbjct: 573 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 630

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           + + R++    E +  R +   N + + +         +   Q  LE+Q+  E+     +
Sbjct: 631 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 690

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444
           R      +E  +     + Q    + +LH        ++  +   +++         V+ 
Sbjct: 691 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 749

Query: 445 TTRILQ 450
               L+
Sbjct: 750 LEEQLR 755


>gi|189423130|ref|YP_001950307.1| metal dependent phosphohydrolase [Geobacter lovleyi SZ]
 gi|189419389|gb|ACD93787.1| metal dependent phosphohydrolase [Geobacter lovleyi SZ]
          Length = 371

 Score = 40.9 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 48  HSSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105
             +G  Y +LK  D    ID  +W   +++++   ++G    + G  + +    K Q++ 
Sbjct: 29  AKNGKPYMNLKFMDKSGEIDGKLW-DNVDELDKTFQKGDFVRIRGTASLYM--GKMQLVA 85

Query: 106 ESL 108
           + +
Sbjct: 86  KEI 88


>gi|66819079|ref|XP_643199.1| hypothetical protein DDB_G0276361 [Dictyostelium discoideum AX4]
 gi|60471299|gb|EAL69261.1| hypothetical protein DDB_G0276361 [Dictyostelium discoideum AX4]
          Length = 789

 Score = 40.9 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/191 (7%), Positives = 46/191 (24%), Gaps = 2/191 (1%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
           ++          +            +             +++ K          L    +
Sbjct: 160 SNKSIDQTIKTIKELTFDPNEELKKIEAEIEMRKKEEEAMLEAKKQKEKQEQLKLTEQQR 219

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFR--KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                + R++R  RE +  L     R         +    +   L    Q   + I+  +
Sbjct: 220 IEREQKQRMERAEREQQQRLREEYERRLNMELQKKLEIERQEQELTRRKQLELEQIMILK 279

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           +  E  ++        ++K ++A       + +           +           +++ 
Sbjct: 280 KQEEAGLRILQEQREHQEKVRLAKEKEEELKKRTMEEEARRSAIRAQEIARMSKQQQLEE 339

Query: 438 CHTSVSITTRI 448
               +    R 
Sbjct: 340 EAKRLEQQKRQ 350


>gi|91209463|ref|YP_539449.1| exonuclease subunit SbcC [Escherichia coli UTI89]
 gi|117622658|ref|YP_851571.1| exonuclease subunit SbcC [Escherichia coli APEC O1]
 gi|218557306|ref|YP_002390219.1| exonuclease subunit SbcC [Escherichia coli S88]
 gi|237707611|ref|ZP_04538092.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA]
 gi|91071037|gb|ABE05918.1| exonuclease SbcC [Escherichia coli UTI89]
 gi|115511782|gb|ABI99856.1| ATP-dependent dsDNA exonuclease [Escherichia coli APEC O1]
 gi|218364075|emb|CAR01740.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli S88]
 gi|226898821|gb|EEH85080.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA]
 gi|294490953|gb|ADE89709.1| nuclease SbcCD, C subunit [Escherichia coli IHE3034]
 gi|307628134|gb|ADN72438.1| exonuclease subunit SbcC [Escherichia coli UM146]
 gi|315289890|gb|EFU49280.1| nuclease sbcCD, subunit C [Escherichia coli MS 110-3]
 gi|323952992|gb|EGB48860.1| exonuclease SbcC [Escherichia coli H252]
 gi|323958589|gb|EGB54292.1| exonuclease SbcC [Escherichia coli H263]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+       R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R+
Sbjct: 299 IAEYSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRL 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|212537003|ref|XP_002148657.1| septin AspB [Penicillium marneffei ATCC 18224]
 gi|210068399|gb|EEA22490.1| septin AspB [Penicillium marneffei ATCC 18224]
          Length = 464

 Score = 40.5 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 150 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 209

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 210 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQYHSIQIFE 267

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + +  G +       W +   D      
Sbjct: 268 GPRYELDDEETIAENQEIMSKVPFAVVGANAEVTTPDGRKVRGRRYPWGVIEVDNEEHCD 327

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++ +  E   ++ + ++   +  ++   +      ++  + 
Sbjct: 328 FVKLRQMLIRTHMEELKEHTNNVLYENYRSDKLTQMGVAQDPSVFKEVNPAVKQEEERAL 387

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   E  +  K        + + +    +   +++ RQ + EK+  +E
Sbjct: 388 HEQKLAKMEAEMKMVFEQKVREKESKLKQSEDELYARHREMKDQLERQRQDLEEKKARLE 447

Query: 382 QIVKQHLRYIFLEKKEK 398
                           +
Sbjct: 448 SGRPLEKESKRKGFSLR 464


>gi|257059354|ref|YP_003137242.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802]
 gi|256589520|gb|ACV00407.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802]
          Length = 1226

 Score = 40.5 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/151 (7%), Positives = 50/151 (33%), Gaps = 3/151 (1%)

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               L +  Q L     +  +  +E ++N+  +           +    +       Q++
Sbjct: 348 QRNQLEHRQQELINLSQQNQKSLQETQNNIAQLEHNLTHLTQETLELDNNTIPFLIQQRD 407

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R     +    +          +++++  ++      + T N        + +   ++  
Sbjct: 408 RTRQTLEMVRTQANAIAEASDAWVQEQSALSRKITAIQDTLNPQRTQQAKLNERRQQLNK 467

Query: 430 ILSH---KIKSCHTSVSITTRILQSFAYKNT 457
            + +   +++   T ++   + L + +++ T
Sbjct: 468 TIDNETQQLQEIETELNSQHQELNTLSHQAT 498


>gi|219112917|ref|XP_002186042.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582892|gb|ACI65512.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 809

 Score = 40.5 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 60/218 (27%), Gaps = 9/218 (4%)

Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
            +  ++  GH    T     A          A    P                      L
Sbjct: 241 PVATMATSGHTQPETPFGTPAQTATKPTNSGAPTGPPKPPIPPKPATQKAQDSAEAKEAL 300

Query: 300 IKYK--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            + +     + SL + L  ++  +   R  L+R    +E +                   
Sbjct: 301 KQVRILRRHVLSLNQELEKAESEMQAQRDELERAADRMEKDRVRRKEE-----QEKEKVR 355

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
            ++ L     ++ Q + + +   +Q V    R +   +  ++        +    I    
Sbjct: 356 HAEELRALKSQHDQILKDVKARSDQQVNDVRRQLKELENRRMQEGGDYNNELAEAIQREQ 415

Query: 418 THIKK--LITRIEFILSHKIKSCHTSVSITTRILQSFA 453
             +++  ++   +  +  +I +           L+S +
Sbjct: 416 DMMQRYSMLEDEKSTMLSQIATLQAQQESLGSRLESLS 453


>gi|149041260|gb|EDL95193.1| kinesin family member 16B (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 1256

 Score = 40.5 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
            A  +  P  E  +     LE   +   +     +    +     L    Q +   R   
Sbjct: 573 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 630

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           + + R++    E +  R +   N + + +         +   Q  LE+Q+  E+     +
Sbjct: 631 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 690

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444
           R      +E  +     + Q    + +LH        ++  +   +++         V+ 
Sbjct: 691 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 749

Query: 445 TTRILQ 450
               L+
Sbjct: 750 LEEQLR 755


>gi|242810470|ref|XP_002485588.1| septin AspB [Talaromyces stipitatus ATCC 10500]
 gi|218716213|gb|EED15635.1| septin AspB [Talaromyces stipitatus ATCC 10500]
          Length = 467

 Score = 40.5 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   +  +  +   E  F             N +            
Sbjct: 153 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 212

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      Q   +          I  
Sbjct: 213 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQYHSIQIFE 270

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     E+    N E++     A+  ++  + +  G +       W +   D      
Sbjct: 271 GPRYELDDEETIAENQEIMSKVPFAVVGANAEVTTPDGRKVRGRRYPWGVIEVDNEEHCD 330

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++ +  E   ++ + ++   +  ++   +      ++  + 
Sbjct: 331 FVKLRQMLIRTHMEELKEHTNNVLYENYRSDKLTQMGVAQDPSVFKEVNPAVKQEEERAL 390

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   E  +  K        + + +    +   +++ RQ + EK+  +E
Sbjct: 391 HEQKLAKMEAEMKMVFEQKVREKESKLKQSEDELYARHREMKDQLERQRQDLEEKKARLE 450

Query: 382 QIVKQHLRYIFLEKKEK 398
                           +
Sbjct: 451 SGRPLEKESKRKGFSLR 467


>gi|323164187|gb|EFZ49994.1| exonuclease sbcC [Shigella sonnei 53G]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|281177567|dbj|BAI53897.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE15]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEQAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|194217648|ref|XP_001504851.2| PREDICTED: similar to Centrobin (Centrosomal BRCA2-interacting
           protein) (LYST-interacting protein 8) isoform 1 [Equus
           caballus]
          Length = 894

 Score = 40.5 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            LE +    +            S  + L      L   R    +   +L+   + +    
Sbjct: 318 ELEQQRCRALQEERDEARAGQLSEHRQLETLQVALEEERQTRAQQEHQLKERYQALQEEG 377

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                      + +       + +  +++ +    +      R      + +++++    
Sbjct: 378 QAQLEREKGNTQREAQAAREAQQQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 437

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + +I         +++  R+       ++   +      + LQ   
Sbjct: 438 ESQRLQIESELAVQLEQQVTERLAQAQESSLRQAASLREHHRKQLQDLN 486


>gi|333008589|gb|EGK28057.1| exonuclease sbcC [Shigella flexneri VA-6]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|332760674|gb|EGJ90962.1| exonuclease sbcC [Shigella flexneri 4343-70]
 gi|333007760|gb|EGK27236.1| exonuclease sbcC [Shigella flexneri K-218]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|325282740|ref|YP_004255281.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus
           proteolyticus MRP]
 gi|324314549|gb|ADY25664.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus
           proteolyticus MRP]
          Length = 605

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 8/140 (5%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI-INRIKSDFLIHNIQKNRQHILEK 376
           D+ L+ +R   +    E+  NL     +     + +    ++   L   +   R  + + 
Sbjct: 81  DRLLAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQHLQVQALQGTVSAERLQLEQD 140

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLR------EQTKNRIFYLHTHIKKLITRIEFI 430
           ++ +E   +     +  E++   A     R       +   R       +     R++  
Sbjct: 141 RERLEAERQALKAEMAQEREHLSADRQEYRAERDAMNRELERQSRRAEQLDVRGERLD-A 199

Query: 431 LSHKIKSCHTSVSITTRILQ 450
           L  +++     ++     LQ
Sbjct: 200 LEERLEKQGRDLAAQAEELQ 219



 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/177 (9%), Positives = 50/177 (28%), Gaps = 9/177 (5%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                LE +     +           +   AL    +  S ++        + +   + +
Sbjct: 26  QQRERLEQQHEQQALERADTIRREAEADALALREQAR--SETQAAQAAALAQAQAQADRL 83

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAI 401
           + +           +  +      Q   +     +QH++ Q ++  +    L+ ++    
Sbjct: 84  LAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQHLQVQALQGTVSAERLQLEQDRER 143

Query: 402 LHMLREQTKNRIFYLHTHIKKLIT--RIEF-ILSHKIKSCHTSVSITT---RILQSF 452
           L   R+  K  +     H+       R E   ++ +++               L + 
Sbjct: 144 LEAERQALKAEMAQEREHLSADRQEYRAERDAMNRELERQSRRAEQLDVRGERLDAL 200


>gi|323170476|gb|EFZ56126.1| exonuclease sbcC [Escherichia coli LT-68]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|74310966|ref|YP_309385.1| exonuclease subunit SbcC [Shigella sonnei Ss046]
 gi|73854443|gb|AAZ87150.1| ATP-dependent dsDNA exonuclease [Shigella sonnei Ss046]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|333010836|gb|EGK30262.1| exonuclease sbcC [Shigella flexneri K-272]
 gi|333021335|gb|EGK40588.1| exonuclease sbcC [Shigella flexneri K-227]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|300918226|ref|ZP_07134832.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1]
 gi|300414611|gb|EFJ97921.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|154506663|ref|ZP_02043120.1| hypothetical protein RUMGNA_03930 [Ruminococcus gnavus ATCC 29149]
 gi|153793312|gb|EDN75735.1| hypothetical protein RUMGNA_03930 [Ruminococcus gnavus ATCC 29149]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 3/153 (1%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           +       L S+   + +    L     RL++   +++        +  + F  I  + +
Sbjct: 16  MGMTNEQLLQSITTVIVDRFDMLDGRIERLEQRVDKMDTEFRQKFEQIDQKFEQIDQKFE 75

Query: 359 SDFLI-HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                   I +  + I  K + I+Q  +Q  R  F +  +K   +    EQ   +   + 
Sbjct: 76  QIGQKFEQIDRKFEQIDRKFEQIDQKFEQIDR-KFEQIDQKFEQIDRKFEQIDQKFDQMD 134

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             ++++  + E  +  +++  +  +  T R L 
Sbjct: 135 RKLEQIDQKFEQ-IDRRLEDMNQRLEGTNRRLD 166


>gi|119179866|ref|XP_001241463.1| hypothetical protein CIMG_08626 [Coccidioides immitis RS]
          Length = 734

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/217 (9%), Positives = 64/217 (29%), Gaps = 1/217 (0%)

Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
             V+      I I          +L D   D+        A++    +     +++ L +
Sbjct: 256 ATVQKCPFCKIEICGMCRGPVHVSLLDCPGDIGLEATLEEADLCGWRRCPQCRAMVELIS 315

Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
              ++I +       T  +  +    ++         L     E     E+         
Sbjct: 316 GCRHMICKCRAQFCYTCGARWRTCQCTEVDQRRREEELQDRRFERNAAAELEARELADAL 375

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             I    + +      ++  +   E+++  E+  ++ +      +  ++A+  + + Q  
Sbjct: 376 AEIERLEQREAEEIVRREEARRRAEEEEAREREAQRMMAIAESTRNMRLALDRINKLQQT 435

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
             I         L  +++  +  + +     +    R
Sbjct: 436 VLIKRHEADASSLQEKLQDQMK-QFELRRQRLESALR 471


>gi|24111775|ref|NP_706285.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 301]
 gi|30061893|ref|NP_836064.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 2457T]
 gi|24050561|gb|AAN41992.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 301]
 gi|30040137|gb|AAP15870.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 2457T]
 gi|281599728|gb|ADA72712.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2002017]
 gi|313646988|gb|EFS11445.1| exonuclease sbcC [Shigella flexneri 2a str. 2457T]
 gi|332764270|gb|EGJ94506.1| exonuclease sbcC [Shigella flexneri K-671]
 gi|333022044|gb|EGK41289.1| exonuclease sbcC [Shigella flexneri K-304]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|291414864|ref|XP_002723676.1| PREDICTED: nesprin-3 [Oryctolagus cuniculus]
          Length = 1122

 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 51/184 (27%), Gaps = 4/184 (2%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            ++   +  H       L      +   L  Y+     +L        Q LS  + RL + 
Sbjct: 930  QLYWALSLHRTWMYQALSVYQTWLYWALDLYQARLYQALSLHWTRLYQALSVYQIRLYQA 989

Query: 332  PRELEHNLEIIIFRKYRHFNH---IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
                +  L   +   +        +        L  +     Q +   Q  + Q +  + 
Sbjct: 990  LDLYQARLYWALSLHWTRLYQALDLYQTRLYWALSLHQTWMYQALSVYQTRLYQALGLYQ 1049

Query: 389  RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTR 447
                       A L+        R+  L+  +     R+   LS      + ++     R
Sbjct: 1050 AQQDQALGLYQARLYQALSLHWTRLTRLYQALGLYQARLYQALSLHWTRLYQALGLALPR 1109

Query: 448  ILQS 451
             LQ+
Sbjct: 1110 RLQA 1113



 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/164 (9%), Positives = 43/164 (26%), Gaps = 9/164 (5%)

Query: 299  LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
                +   L      L  +        Y    L R   +    +          +     
Sbjct: 905  QKTRQYQALGLHQTRLYQALDLYQTQLYWALSLHRTWMYQALSVYQTWLYWALDLYQARL 964

Query: 359  SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI----- 413
               L  +  +  Q +   Q  + Q +  +   ++         L+   +  + R+     
Sbjct: 965  YQALSLHWTRLYQALSVYQIRLYQALDLYQARLYWALSLHWTRLYQALDLYQTRLYWALS 1024

Query: 414  ---FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL-QSFA 453
                +++  +    TR+   L         ++ +    L Q+ +
Sbjct: 1025 LHQTWMYQALSVYQTRLYQALGLYQAQQDQALGLYQARLYQALS 1068


>gi|116333410|ref|YP_794937.1| DNA polymerase III, alpha subunit [Lactobacillus brevis ATCC 367]
 gi|116098757|gb|ABJ63906.1| DNA polymerase III catalytic subunit, DnaE type [Lactobacillus brevis
            ATCC 367]
          Length = 1121

 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 53/179 (29%), Gaps = 25/179 (13%)

Query: 17   VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76
            VSEL+ + +  V      + V  +I   R       A+ +  D  + +   I+     +I
Sbjct: 940  VSELTANTRVTV-----LLYVI-KIRQIRTKRGEPMAFVTGSDETADVSVTIFPNQFRQI 993

Query: 77   EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
                      +V GK+         QI+ + +  +              ++  + +    
Sbjct: 994  SEWLATDQVIVVRGKV---EQQRGLQIVADQVSLA-------------DQIPVKPVADQH 1037

Query: 137  HKNPIP---FIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192
                +P        +    +      +      + R P+ VI++  +        +   
Sbjct: 1038 TTPTLPAGARWFIRVDQQHTDRAIAQQLAQFLTAHRGPVPVIVYQPQTDEKRILPKTQW 1096


>gi|165926650|ref|ZP_02222482.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165935941|ref|ZP_02224511.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275]
 gi|167421647|ref|ZP_02313400.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167468102|ref|ZP_02332806.1| hypothetical protein YpesF_09434 [Yersinia pestis FV-1]
 gi|229838813|ref|ZP_04458972.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229899381|ref|ZP_04514524.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195]
 gi|165916086|gb|EDR34693.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921578|gb|EDR38775.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166960566|gb|EDR56587.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|229687783|gb|EEO79856.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195]
 gi|229695179|gb|EEO85226.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2]
          Length = 1235

 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|194219603|ref|XP_001917261.1| PREDICTED: serine/threonine kinase 10 [Equus caballus]
          Length = 972

 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +  + ++ +   + L+K            R+ L R   
Sbjct: 725 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 782

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 783 KEREQMQRYNQRMVEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSPAEQRE 842

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  +   T+ 
Sbjct: 843 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLLIEHETQK 902

Query: 449 LQSFA 453
           L++  
Sbjct: 903 LKALD 907


>gi|190347332|gb|EDK39582.2| hypothetical protein PGUG_03680 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 321

 Score = 40.5 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 9/209 (4%)

Query: 247 IGHETDWTLADYAADL-----RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           I  E    + +   D       AP P       +   +  +    +L+      + R I 
Sbjct: 28  INPECYHNICESCVDRIFSLGPAPCPYPKCGKILRKNKFKKQVFDDLKIEKEVDLRRRIS 87

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              N        L   +  L      ++ L   L + +++    +        ++I    
Sbjct: 88  AIYNKTEDDFDDLKEYNSYLEH----VETLVFNLINGVDVEATEQEIKKYEQDHKIDILE 143

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           +     +    + + Q+ +E++ ++ L+     + E +      ++   +R+   +    
Sbjct: 144 INMRESQKTSDLEKYQEAMERMKQEKLKIQHQMELEDLEYQKQQKQSLLDRLSSSNIDSD 203

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQ 450
           ++I +    ++ ++      +   T  L+
Sbjct: 204 EIIAQNNSRVNKRLSMRKQQLQQITSQLE 232


>gi|332761698|gb|EGJ91977.1| exonuclease sbcC [Shigella flexneri 2747-71]
 gi|332768500|gb|EGJ98683.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2930-71]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|301330746|ref|ZP_07223347.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1]
 gi|300843318|gb|EFK71078.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|325661173|ref|ZP_08149800.1| hypothetical protein HMPREF0490_00533 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472680|gb|EGC75891.1| hypothetical protein HMPREF0490_00533 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 139

 Score = 40.5 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 17/93 (18%)

Query: 14  EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL--------------KD 59
            ++V +L  +     +     V + GEI   +     G  Y +L              KD
Sbjct: 26  VFTVGDLIRYFPRGYDVYDPPVSI-GEIQEQKVQAVRGMIYGTLQVSSRGAQVTSGYLKD 84

Query: 60  NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
               I  + ++  +  +    + G   ++ G++
Sbjct: 85  MTGTIKIVWYR--MPFLRNTLQNGQIVILRGRV 115


>gi|300924113|ref|ZP_07140106.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1]
 gi|300419666|gb|EFK02977.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|284165987|ref|YP_003404266.1| nucleic acid binding OB-fold tRNA/helicase-type [Haloterrigena
           turkmenica DSM 5511]
 gi|284015642|gb|ADB61593.1| nucleic acid binding OB-fold tRNA/helicase-type [Haloterrigena
           turkmenica DSM 5511]
          Length = 735

 Score = 40.5 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 26  HIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
             +E+ +  V  + GEI+G     +SG   F L+D  + ++   +
Sbjct: 237 EAIENQVGSVVRLEGEITGV--RQTSGPTVFELRDETATVECAAF 279


>gi|289192816|ref|YP_003458757.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus
           sp. FS406-22]
 gi|288939266|gb|ADC70021.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus
           sp. FS406-22]
          Length = 202

 Score = 40.5 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 80  PEEGIEFLVIGKITTFPGSSKYQIIIESL 108
            +EG    V G+I+ +    +YQII+  +
Sbjct: 102 IKEGDYVEVKGRISVY--QGRYQIILNDI 128


>gi|110804420|ref|YP_687940.1| exonuclease subunit SbcC [Shigella flexneri 5 str. 8401]
 gi|110613968|gb|ABF02635.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 5 str. 8401]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|256079983|ref|XP_002576263.1| serine/threonine protein kinase [Schistosoma mansoni]
 gi|238661527|emb|CAZ32499.1| serine/threonine kinase [Schistosoma mansoni]
          Length = 2290

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 71/234 (30%), Gaps = 2/234 (0%)

Query: 216  RGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275
            R   +   L    D++ V       +  +SAI  +    +     D      +    +  
Sbjct: 1790 RADKAETQLKSLRDQIAVMLTERGRLVSLSAIDSQRLSDMQLQLNDAIMKKESAEISLRE 1849

Query: 276  PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                  + +  + +  + + +    +   + L +    L +  +     R R+    RE+
Sbjct: 1850 ATLRLERLNTTHNQTLILDQMRNEFESTRSQLRTAQTELIHYKKNEELLRERVANYEREI 1909

Query: 336  EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
               L+  +       + + + I       N  +    I+      + +  +  +     +
Sbjct: 1910 SD-LQQEVTLLRTRHDQLQSSIAVGRTAENSSEVHNQIVTLTDEKQLLQDEIDQLRTQVE 1968

Query: 396  KEKIAILHMLREQTKNRIFYLHTHIKKLITR-IEFILSHKIKSCHTSVSITTRI 448
            + ++    +L ++   R     + +  +  + +       ++     +S  T  
Sbjct: 1969 RLRLNNTQLLSQRDTARQEARESEMATVRAKELGEATQQALEREVHRLSTITEQ 2022


>gi|163847799|ref|YP_001635843.1| SMC domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525668|ref|YP_002570139.1| SMC domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669088|gb|ABY35454.1| SMC domain protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449547|gb|ACM53813.1| SMC domain protein [Chloroflexus sp. Y-400-fl]
          Length = 1032

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 51/175 (29%), Gaps = 13/175 (7%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN--LEIIIFR 345
              +      +          +L      + + L        R          L   I R
Sbjct: 217 FWQQAVAEAEQRQHTLQQQRTALEAEFTQASEKLRHLEQEAHRQREVQNRIAILTGEIQR 276

Query: 346 KYRHFNHIINRIKS----DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
                  +  RI            I+     +   +  +E++ +   RY  L  +++   
Sbjct: 277 YSNELRELNARIAQAEQTIAQRPLIEAGLAELHAARADLERLEQLRTRYDELMARKR--- 333

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAY 454
              L+++ K  +  L+  +   I +++     + ++      V+   + L+  A 
Sbjct: 334 --ELQQELKAELNLLNERLSHAIQQLDRLYAEAQRLVGLQQRVAAIRQRLRELAP 386



 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 45/152 (29%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +   N +    +A+  ++Q     + +   L  E     E +   +         + +  
Sbjct: 209 QPIANQVPFWQQAVAEAEQRQHTLQQQRTALEAEFTQASEKLRHLEQEAHRQREVQNRIA 268

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L   IQ+    + E    I Q  +   +   +E             +   ++   +  +
Sbjct: 269 ILTGEIQRYSNELRELNARIAQAEQTIAQRPLIEAGLAELHAARADLERLEQLRTRYDEL 328

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
                 ++  L  ++   +  +S   + L   
Sbjct: 329 MARKRELQQELKAELNLLNERLSHAIQQLDRL 360


>gi|282880443|ref|ZP_06289150.1| ATP-dependent DNA helicase RecG [Prevotella timonensis CRIS 5C-B1]
 gi|281305546|gb|EFA97599.1| ATP-dependent DNA helicase RecG [Prevotella timonensis CRIS 5C-B1]
          Length = 700

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 53/439 (12%), Positives = 117/439 (26%), Gaps = 36/439 (8%)

Query: 28  VESNLSHVCVRGEISGYRGIHSSGH-----AYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82
           +  +L  V ++G+I  +       H     A+FS  D    +D + ++G    +    + 
Sbjct: 55  LRGDLPFVQLKGKILSFEEFAMGAHRKRVVAHFS--DGTGVVDLVWFRG-AQYVYKTYKV 111

Query: 83  GIEFLVIGKITTFPGSSKYQI------IIESLIPSGSGT--LLTALEKRKKKLLEEGLFS 134
             E++V G+ + +    +YQ        +  +  S  G        E+ KK  L      
Sbjct: 112 NEEYIVFGRPSIYG--GRYQFAHPDIDKVTDVQLSEMGMQPYYMTTERMKKMGLTSRSLE 169

Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194
              K  +  + +     T P    I   L  IS    L  I +P  ++  +  +      
Sbjct: 170 KLTKTLVEKLFEQTISETLPPY--IIGPLHLISRTEALHKIHYPKSLEDVQRAQVRLKFE 227

Query: 195 L----QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI----VRAIANSSIPIISA 246
                QLN L+      R     +    GS+   ++ N+        +      I    A
Sbjct: 228 ELFYVQLNILRYAHDQRRKYRGYVFTQVGSLFHFFYHNNLPFELTNAQKRVMHEIRNDMA 287

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
            G + +  +       +       + +           +   E         + K+    
Sbjct: 288 TGQQMNRLVQGDVGSGKTLV-ALMSMLIAIGNGFQACMMAPTEILAEQHFATIRKFLRQM 346

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366
              +                                +      F+ +   +      H  
Sbjct: 347 PVRIELLTGIVKGKKREEILNGLLTGEVQILVGTHAVIEDNVQFSRL--GLAVVDEQHRF 404

Query: 367 -QKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
               R  +  K Q     +        R + +     + +  +       +         
Sbjct: 405 GVAQRAKLWGKSQQPPHILVMTATPIPRTLAMTIYGDLDVSVIDELPPGRKPIQTIHKYD 464

Query: 422 KLITRIEFILSHKIKSCHT 440
             +T +   +  +I+    
Sbjct: 465 NQLTSLYQGIRQQIRQGRQ 483


>gi|194218419|ref|XP_001916972.1| PREDICTED: similar to CDC42 binding protein kinase gamma
           (predicted) [Equus caballus]
          Length = 1549

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/206 (6%), Positives = 58/206 (28%), Gaps = 9/206 (4%)

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           +++ + D   +     P  +                   +         +      L  L
Sbjct: 363 SNFDVDDDTLNHPGTLPPPSHGTFSGHHLPFVGFTYTSSSPSPESSSEQVAALEQRLRCL 422

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK-SDFLIHNIQKN 369
            +      + L  +              LE +        + +   ++ S   +   + +
Sbjct: 423 EQEKTELSRKLQEALQMPSDHRE-----LEQLRKEVQTLQDRLSEMLRESKAPVSQTEGS 477

Query: 370 RQHILEKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
                + QQ  ++++++    +     +++++      +E+   R+           ++ 
Sbjct: 478 PGQHSDLQQERDRLLQELAEAQTRLQMQEQELGRAQGRQEELLQRLQEAQEREASTASQ- 536

Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453
              L+ +++    +       + + +
Sbjct: 537 TQALNSQLEEARDARRELQAQVATLS 562


>gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1785

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 72/256 (28%), Gaps = 22/256 (8%)

Query: 244  ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
             +A G     +      D          E A P+           E      +I L    
Sbjct: 1187 CTAYGETHPRSFCPQKGDCPVNCAKRGEEKAPPLSNTRMCVSSKCEVDEREELITLESIA 1246

Query: 304  INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            ++    +     L       +  + +   L    +  +        R        ++ + 
Sbjct: 1247 MHNEKFIKAYGNLQMCTTLEALKKEQEIDLSVRFKAAIRERKEVIKRKTEEAQRSVEREK 1306

Query: 362  LIHNIQKNRQHILEKQQHIEQIVKQHLRY-----IFLEKKEKIAILHMLREQ----TKNR 412
             I    +  Q  +E Q   +  + +           L  +++    ++ R +     +N+
Sbjct: 1307 QIRESIRKAQEYIESQLRRKNSLYRREEEAVTSIKKLHLRDRQMGRNIRRCRNDMVLQNK 1366

Query: 413  IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
            + Y+   + KL+ R    +   ++     ++     + S             +Q+ +N  
Sbjct: 1367 LHYVKVEMVKLLHRHMAAIQLDMERKREELNQVEEKIHSN----------EMMQNESNEL 1416

Query: 473  ITQKRNLATKTRILIN 488
              + R    +  + + 
Sbjct: 1417 AKKVRQ-KKEQILSLQ 1431


>gi|51595265|ref|YP_069456.1| ATP-dependent dsDNA exonuclease [Yersinia pseudotuberculosis IP
           32953]
 gi|186894282|ref|YP_001871394.1| SMC domain-containing protein [Yersinia pseudotuberculosis PB1/+]
 gi|51588547|emb|CAH20155.1| putative ATP-dependent dsDNA exonuclease [Yersinia
           pseudotuberculosis IP 32953]
 gi|186697308|gb|ACC87937.1| SMC domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 1229

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|19921240|ref|NP_609632.1| CG6116 [Drosophila melanogaster]
 gi|20140917|sp|Q9VK07|UVRAG_DROME RecName: Full=UVRAG-like protein
 gi|7298036|gb|AAF53277.1| CG6116 [Drosophila melanogaster]
 gi|17862042|gb|AAL39498.1| LD05963p [Drosophila melanogaster]
 gi|220943274|gb|ACL84180.1| CG6116-PA [synthetic construct]
          Length = 696

 Score = 40.5 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             ++      ++   L+ ++    +    TL +  +     +   S  R          +
Sbjct: 298 SGDYSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395
            N       K         + +     H ++K R  +     QH+EQ  +   R I  + 
Sbjct: 358 RNERTRQLLKEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
           + +++ L +  ++  N                   +           +   ++L + +  
Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472

Query: 456 NT 457
             
Sbjct: 473 AV 474


>gi|170025495|ref|YP_001722000.1| SMC domain-containing protein [Yersinia pseudotuberculosis YPIII]
 gi|169752029|gb|ACA69547.1| SMC domain protein [Yersinia pseudotuberculosis YPIII]
          Length = 1229

 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|239636287|ref|ZP_04677289.1| chromosome segregation protein SMC [Staphylococcus warneri L37603]
 gi|239597642|gb|EEQ80137.1| chromosome segregation protein SMC [Staphylococcus warneri L37603]
          Length = 1189

 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 55/169 (32%), Gaps = 3/169 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  +        +  + +  +  +  + L      LS S   L       E  L+ +  +
Sbjct: 683 MRHQLENYQKQTQEFEKQFQSHQAQSEKLSEKYFELSQSYNNLKEKAHGYELELDRLKKQ 742

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK--EKIAILH 403
           +    +            +   K++  + +KQQ + +I  Q  +     +K  +      
Sbjct: 743 ETHLKDEHEEFEFEKNDGYQSDKSKATLEQKQQQLSEIQSQLKQLEADIEKYTKLSKEGK 802

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
               QT+  +    + +  +  RI+     +I+     +  T + L + 
Sbjct: 803 ETTTQTQQHLHQKQSDLAVVKERIK-GQQQEIERLEKQLQSTEQQLDTV 850


>gi|208019317|emb|CAQ14338.1| finTRIM family protein [Danio rerio]
          Length = 498

 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/201 (9%), Positives = 47/201 (23%), Gaps = 8/201 (3%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D     +               ++      NL     +    LI         + +   
Sbjct: 34  CDSCTGRKHKATKSCLVCLNSYCQNHLEQHENLFKGKRH---NLIDATGRLQEMICRKHD 90

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
              +    +  R   +   ++ + +               ++         Q+  Q    
Sbjct: 91  KLLEIYRRTDQRCICMLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRER 148

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           K Q + + VK H R      K+   +   L    + +   +   I+             +
Sbjct: 149 KLQELNEAVKIHERSAQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLL 208

Query: 436 KSCHTSVSITT---RILQSFA 453
           K     +         L+  +
Sbjct: 209 KQLQQEIDDLRGKNAKLEQLS 229


>gi|153949358|ref|YP_001402099.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758]
 gi|152960853|gb|ABS48314.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758]
          Length = 1229

 Score = 40.5 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|297618776|ref|YP_003706881.1| hypothetical protein Mvol_0248 [Methanococcus voltae A3]
 gi|332321758|sp|D7DRZ8|TIAS_METV3 RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS;
           Short=tRNA(Ile2)-agm2C synthetase; AltName:
           Full=tRNA(Ile2) agmatidine synthetase
 gi|297377753|gb|ADI35908.1| domain of unknown function DUF1743 [Methanococcus voltae A3]
          Length = 508

 Score = 40.5 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 37  VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFLVIGKITT 94
           + G IS      + GH    L D+   I+ I ++ T     I      G    V G I  
Sbjct: 356 LSGYISEEFTEITGGHVLIELTDSTGSINCIAYEPTKKFRHIIRELAIGDLITVYGTIRE 415

Query: 95  FPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125
                 YQ+ IE +       L   ++K + 
Sbjct: 416 -EP---YQLNIEKINVVKLNNLYEKVKKCEC 442


>gi|221632204|ref|YP_002521425.1| putative DNA helicase [Thermomicrobium roseum DSM 5159]
 gi|221156835|gb|ACM05962.1| putative DNA helicase [Thermomicrobium roseum DSM 5159]
          Length = 948

 Score = 40.5 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 18/168 (10%)

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           L      +                    +         H               + R  +
Sbjct: 632 LAQPVSDVRGIVSTEAFEEIWRAFAARPLPDLDAMLLEHRRQVEARLAPERRRIEER--L 689

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              QQ + ++ +Q  R+     + +        ++   RI  L     +L  ++   ++ 
Sbjct: 690 QTIQQTLHELTQQRFRHPCHACQRR-----KEHQRNLQRIARLEQERAELEAQLGREIAA 744

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGY--------TSIQDTNNNFI 473
           + +     +     +L+ F Y   L RGY          + DTN   I
Sbjct: 745 EERRVRELLRGIRNVLEHFGY---LHRGYPTSKADTLADVFDTNGLII 789


>gi|22124883|ref|NP_668306.1| ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10]
 gi|45440575|ref|NP_992114.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108811047|ref|YP_646814.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516]
 gi|145600099|ref|YP_001164175.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F]
 gi|166010994|ref|ZP_02231892.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212888|ref|ZP_02238923.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167423530|ref|ZP_02315283.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229896034|ref|ZP_04511204.1| Exonuclease SbcC [Yersinia pestis Pestoides A]
 gi|229901272|ref|ZP_04516394.1| Exonuclease SbcC [Yersinia pestis Nepal516]
 gi|270489461|ref|ZP_06206535.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27]
 gi|294504933|ref|YP_003568995.1| periplasmic binding transport protein [Yersinia pestis Z176003]
 gi|21957717|gb|AAM84557.1|AE013701_2 ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10]
 gi|45435432|gb|AAS60991.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108774695|gb|ABG17214.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516]
 gi|145211795|gb|ABP41202.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F]
 gi|165989994|gb|EDR42295.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205675|gb|EDR50155.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167057700|gb|EDR67446.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681201|gb|EEO77295.1| Exonuclease SbcC [Yersinia pestis Nepal516]
 gi|229700957|gb|EEO88986.1| Exonuclease SbcC [Yersinia pestis Pestoides A]
 gi|262362997|gb|ACY59718.1| periplasmic binding transport protein [Yersinia pestis D106004]
 gi|262366921|gb|ACY63478.1| periplasmic binding transport protein [Yersinia pestis D182038]
 gi|270337965|gb|EFA48742.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27]
 gi|294355392|gb|ADE65733.1| periplasmic binding transport protein [Yersinia pestis Z176003]
 gi|320016392|gb|ADV99963.1| Exonuclease SbcC [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 1229

 Score = 40.5 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|14520587|ref|NP_126062.1| hypothetical protein PAB0247 [Pyrococcus abyssi GE5]
 gi|5457803|emb|CAB49293.1| Predicted DNA-binding protein [Pyrococcus abyssi GE5]
          Length = 422

 Score = 40.5 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 18/114 (15%)

Query: 22  YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75
             +K I      +V VRG+++  +      H +F ++D   ++          ++  + K
Sbjct: 257 KKIKDI--RLYDNVIVRGKVAS-KYWEKGRHVFFEIEDETGKMRVAAFEPTKKFRNYVRK 313

Query: 76  IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
           +      G E +V G +          I +E   P     L+   E RK +   
Sbjct: 314 LLP----GDEVIVAGGVK--EHEGVLTINLEKFYPV---KLVPKREYRKPRCPR 358


>gi|162421047|ref|YP_001607635.1| nuclease SbcCD, C subunit [Yersinia pestis Angola]
 gi|162353862|gb|ABX87810.1| nuclease SbcCD, C subunit [Yersinia pestis Angola]
          Length = 1220

 Score = 40.5 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 369 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 422

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 423 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 482

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 483 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 520


>gi|296314914|ref|ZP_06864855.1| SMC family protein [Neisseria polysaccharea ATCC 43768]
 gi|296838099|gb|EFH22037.1| SMC family protein [Neisseria polysaccharea ATCC 43768]
          Length = 1161

 Score = 40.5 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + RQ     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQARQDETAAQIQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|332321829|sp|Q8PZP7|TIAS_METMA RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS;
           Short=tRNA(Ile2)-agm2C synthetase; AltName:
           Full=tRNA(Ile2) agmatidine synthetase
          Length = 428

 Score = 40.5 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 9/93 (9%)

Query: 30  SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86
            ++    + G +S        GH  F+++D   + ID   ++       +      G   
Sbjct: 267 RDMHSYRLEGTVSAAPKTLEGGHVIFAVRDREGAEIDCAAFEPTKNFRSLIRKLVPGDLI 326

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
            + G +T    S    + IE +       +   
Sbjct: 327 CLSGSVT----SGT--LNIEKIEIKSLAPVYRE 353


>gi|297517633|ref|ZP_06936019.1| exonuclease subunit SbcC [Escherichia coli OP50]
          Length = 553

 Score = 40.5 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|293413649|ref|ZP_06656298.1| exonuclease subunit SbcC [Escherichia coli B185]
 gi|291433707|gb|EFF06680.1| exonuclease subunit SbcC [Escherichia coli B185]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELHQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|21226547|ref|NP_632469.1| hypothetical protein MM_0445 [Methanosarcina mazei Go1]
 gi|20904819|gb|AAM30141.1| hypothetical protein MM_0445 [Methanosarcina mazei Go1]
          Length = 449

 Score = 40.5 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 9/93 (9%)

Query: 30  SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86
            ++    + G +S        GH  F+++D   + ID   ++       +      G   
Sbjct: 288 RDMHSYRLEGTVSAAPKTLEGGHVIFAVRDREGAEIDCAAFEPTKNFRSLIRKLVPGDLI 347

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119
            + G +T    S    + IE +       +   
Sbjct: 348 CLSGSVT----SGT--LNIEKIEIKSLAPVYRE 374


>gi|307312228|ref|ZP_07591864.1| exonuclease SbcC [Escherichia coli W]
 gi|306907730|gb|EFN38232.1| exonuclease SbcC [Escherichia coli W]
 gi|315059674|gb|ADT74001.1| ATP-dependent dsDNA exonuclease [Escherichia coli W]
 gi|323379760|gb|ADX52028.1| exonuclease SbcC [Escherichia coli KO11]
 gi|324116880|gb|EGC10793.1| exonuclease SbcC [Escherichia coli E1167]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                  +   RQ I E    ++     +   +H       + ++         Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAAKQSTELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|194438845|ref|ZP_03070930.1| nuclease SbcCD, C subunit [Escherichia coli 101-1]
 gi|253774618|ref|YP_003037449.1| exonuclease subunit SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160464|ref|YP_003043572.1| exonuclease subunit SbcC [Escherichia coli B str. REL606]
 gi|300930312|ref|ZP_07145724.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1]
 gi|194422139|gb|EDX38141.1| nuclease SbcCD, C subunit [Escherichia coli 101-1]
 gi|242376175|emb|CAQ30866.1| ATP-dependent dsDNA exonuclease, subunit of SbcCD ATP-dependent
           dsDNA exonuclease [Escherichia coli BL21(DE3)]
 gi|253325662|gb|ACT30264.1| exonuclease SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972365|gb|ACT38036.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli B str. REL606]
 gi|253976574|gb|ACT42244.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BL21(DE3)]
 gi|300461772|gb|EFK25265.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1]
 gi|323972246|gb|EGB67456.1| exonuclease SbcC [Escherichia coli TA007]
          Length = 1048

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|323963382|gb|EGB58944.1| exonuclease SbcC [Escherichia coli H489]
          Length = 1048

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|320173787|gb|EFW48970.1| Exonuclease SbcC [Shigella dysenteriae CDC 74-1112]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|312964583|ref|ZP_07778839.1| exonuclease sbcC [Escherichia coli 2362-75]
 gi|312290817|gb|EFR18694.1| exonuclease sbcC [Escherichia coli 2362-75]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRTSIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|296478393|gb|DAA20508.1| coiled-coil domain-containing protein 157 [Bos taurus]
          Length = 623

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
           D       P  T     A   K+      L+ L                  +  L +AL 
Sbjct: 209 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 268

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
                        ++   + E   + ++          +  ++ +               
Sbjct: 269 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 327

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q   E   +          ++++ +L    +    +I +  T + K   R++ ++ H+ 
Sbjct: 328 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 386

Query: 436 KSCHTSVSITTRILQSFA 453
           +S         + L S  
Sbjct: 387 ESLQAKQRALLQQLDSLD 404


>gi|134103770|ref|YP_001109431.1| single-strand DNA-binding protein [Saccharopolyspora erythraea
          NRRL 2338]
 gi|291007703|ref|ZP_06565676.1| single-strand DNA-binding protein [Saccharopolyspora erythraea
          NRRL 2338]
 gi|133916393|emb|CAM06506.1| single-strand DNA-binding protein [Saccharopolyspora erythraea
          NRRL 2338]
          Length = 151

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          KD  +  +   IW+     +      G+  +V G++
Sbjct: 40 KDGEALFLRCNIWRQAAENVAESLTRGMRVVVQGRL 75


>gi|82542886|ref|YP_406833.1| exonuclease subunit SbcC [Shigella boydii Sb227]
 gi|81244297|gb|ABB65005.1| ATP-dependent dsDNA exonuclease [Shigella boydii Sb227]
 gi|332098598|gb|EGJ03564.1| exonuclease sbcC [Shigella boydii 3594-74]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|169235665|ref|YP_001688865.1| hypothetical protein OE2141F [Halobacterium salinarum R1]
 gi|167726731|emb|CAP13517.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 630

 Score = 40.5 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 6/113 (5%)

Query: 33  SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
             V + GE+   +     G   F ++D  S I    ++    +     E G    V G  
Sbjct: 120 DTVHIEGEVVQIKQTA--GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDA 177

Query: 93  TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145
                    Q+ +++      G       +    L E+        + +   P
Sbjct: 178 D--DREGTTQLEVDAFEVLSGGDSADVARRLDAALAEQA--DPVDVDALVDWP 226


>gi|26246400|ref|NP_752439.1| exonuclease subunit SbcC [Escherichia coli CFT073]
 gi|300988104|ref|ZP_07178541.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1]
 gi|26106798|gb|AAN78983.1|AE016756_166 Exonuclease sbcC [Escherichia coli CFT073]
 gi|300407518|gb|EFJ91056.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1]
 gi|315294174|gb|EFU53525.1| nuclease sbcCD, subunit C [Escherichia coli MS 153-1]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|297158763|gb|ADI08475.1| single-stranded DNA-binding protein [Streptomyces bingchenggensis
           BCW-1]
          Length = 196

 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|215485478|ref|YP_002327909.1| exonuclease subunit SbcC [Escherichia coli O127:H6 str. E2348/69]
 gi|215263550|emb|CAS07880.1| exonuclease SbcC, dsDNA, ATP-dependent [Escherichia coli O127:H6
           str. E2348/69]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRTSIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|296193656|ref|XP_002744584.1| PREDICTED: serine/threonine-protein kinase 10 isoform 2 [Callithrix
           jacchus]
          Length = 968

 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +         L       +  + ++++   + L+K            R+ L R   
Sbjct: 721 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 778

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 779 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 838

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  V   T+ 
Sbjct: 839 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 898

Query: 449 LQSFA 453
           L++  
Sbjct: 899 LKALD 903


>gi|296193654|ref|XP_002744583.1| PREDICTED: serine/threonine-protein kinase 10 isoform 1 [Callithrix
           jacchus]
          Length = 968

 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +         L       +  + ++++   + L+K            R+ L R   
Sbjct: 721 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 778

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 779 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 838

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  V   T+ 
Sbjct: 839 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 898

Query: 449 LQSFA 453
           L++  
Sbjct: 899 LKALD 903


>gi|87125317|ref|ZP_01081163.1| putative chromosome segregation protein, SMC ATPase superfamily
           protein [Synechococcus sp. RS9917]
 gi|86167086|gb|EAQ68347.1| putative chromosome segregation protein, SMC ATPase superfamily
           protein [Synechococcus sp. RS9917]
          Length = 1185

 Score = 40.5 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 44/149 (29%), Gaps = 3/149 (2%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L+   +   +++  +  SR RL  +     H +E    R  R    + N++       
Sbjct: 353 QALDEAEQVCRDAEAAVEVSRRRLGDVAGRSGHWIEEQRQRSGRRLE-LQNQLTPLQREQ 411

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
                R    E++    Q             ++ +  L    +     +      ++ L+
Sbjct: 412 QQLLERSLQDEERLSELQAELDSDGAEDRRVQDALEQLDREWQALLQDLQAGQQQVQALV 471

Query: 425 TRI--EFILSHKIKSCHTSVSITTRILQS 451
             +  +     +++     +      L S
Sbjct: 472 DALAVQQRTRARLEQEQGRLEREIARLDS 500


>gi|306813137|ref|ZP_07447330.1| exonuclease subunit SbcC [Escherichia coli NC101]
 gi|305853900|gb|EFM54339.1| exonuclease subunit SbcC [Escherichia coli NC101]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|296201331|ref|XP_002748010.1| PREDICTED: centrobin, partial [Callithrix jacchus]
          Length = 907

 Score = 40.5 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/169 (7%), Positives = 51/169 (30%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            +E +    +            S  +AL      L   R    +   +L+ + + +    
Sbjct: 303 EVEQQRCCALQEERDAARAGQLSEHRALEALQAALEEERQTWAQQELQLKEHYQALQLES 362

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
             H      + + +       +++  +++      +      R      + +++++    
Sbjct: 363 QAHLEREKEKGQREAQAAREAQHQLALVQSDMRRLEGELDTARRERDALQLEMSLVQARY 422

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 423 ESQRIQMESELAVQLEQQVTERLAQAQESSLRQAASLREQHRKQLQDLS 471


>gi|227884597|ref|ZP_04002402.1| exonuclease subunit SbcC [Escherichia coli 83972]
 gi|227838683|gb|EEJ49149.1| exonuclease subunit SbcC [Escherichia coli 83972]
 gi|307552301|gb|ADN45076.1| exonuclease SbcC [Escherichia coli ABU 83972]
          Length = 1047

 Score = 40.5 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|157074178|ref|NP_001096803.1| coiled-coil domain-containing protein 157 [Bos taurus]
 gi|134025926|gb|AAI34592.1| LOC100125300 protein [Bos taurus]
          Length = 637

 Score = 40.5 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
           D       P  T     A   K+      L+ L                  +  L +AL 
Sbjct: 209 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 268

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
                        ++   + E   + ++          +  ++ +               
Sbjct: 269 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 327

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q   E   +          ++++ +L    +    +I +  T + K   R++ ++ H+ 
Sbjct: 328 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 386

Query: 436 KSCHTSVSITTRILQSFA 453
           +S         + L S  
Sbjct: 387 ESLQAKQRALLQQLDSLD 404


>gi|281352120|gb|EFB27704.1| hypothetical protein PANDA_011044 [Ailuropoda melanoleuca]
          Length = 2755

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 60/205 (29%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2430 DSHQMNASKGGEKEEGEDGQDLRRTESDGGLKKGGNANLVFMLKRNSEQVVQSVVHLHEL 2489

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R     +   + +       +++K RQ +   Q+  
Sbjct: 2490 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2549

Query: 381  EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q +++  R          +  E++ ++A       + +  + +    ++          
Sbjct: 2550 AQHLEEKRRREREWEARERVLQEREARLAQREQDVRRGQQDLEHERDELQLKKGAYQCDL 2609

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +      L
Sbjct: 2610 ERL-RAAQKQLEREQEQLRRDAERL 2633


>gi|301763908|ref|XP_002917361.1| PREDICTED: pleckstrin homology-like domain family B member 2-like
           [Ailuropoda melanoleuca]
 gi|281352112|gb|EFB27696.1| hypothetical protein PANDA_005585 [Ailuropoda melanoleuca]
          Length = 1247

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 10/188 (5%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 640 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQEIYSEQKTQLDNCPESMREQLQQ 699

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     +    + E+++++ Q + + +         +   
Sbjct: 700 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 757

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-----YKN 456
           +  L++Q  + +          +     ++   ++    ++    +   S +       N
Sbjct: 758 ISALKKQASHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 816

Query: 457 --TLKRGY 462
             TLK GY
Sbjct: 817 PSTLKEGY 824


>gi|218703678|ref|YP_002411197.1| exonuclease subunit SbcC [Escherichia coli UMN026]
 gi|293403514|ref|ZP_06647605.1| exonuclease subunit SbcC [Escherichia coli FVEC1412]
 gi|298379126|ref|ZP_06989007.1| exonuclease subunit SbcC [Escherichia coli FVEC1302]
 gi|300900457|ref|ZP_07118626.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1]
 gi|218430775|emb|CAR11649.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli UMN026]
 gi|291429367|gb|EFF02387.1| exonuclease subunit SbcC [Escherichia coli FVEC1412]
 gi|298280239|gb|EFI21743.1| exonuclease subunit SbcC [Escherichia coli FVEC1302]
 gi|300356048|gb|EFJ71918.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|195156401|ref|XP_002019088.1| GL26177 [Drosophila persimilis]
 gi|194115241|gb|EDW37284.1| GL26177 [Drosophila persimilis]
          Length = 672

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D         +  A PV +      + L+     I       K+  L  L +      + 
Sbjct: 208 DQLGINSPNTSRSASPVLKMSTMRHVQLKCHRQEIRRSYNLDKLLLLQRLQRLQQQKLRH 267

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           ++     + RL        E+ +  +        +   S  + H++ +    +L +QQ I
Sbjct: 268 MTEIGKEIARLSVHCVTRNELRLKPRTTSL----SGDHSHHIHHSMGRTLSVLLAEQQQI 323

Query: 381 EQIVKQHLRY---IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             +   + +         + K  +L   RE  + R       ++ L  R +  L  K+  
Sbjct: 324 APLALYNAQQLTKQIEGLRCKQRLLQAERETCQQRNEKATLRLEALAER-KEALQQKLHR 382

Query: 438 CHTSVSITTRILQSFAYKNTLKR 460
               +      LQ    ++  +R
Sbjct: 383 QRHHLEKERLELQLLQPQHLAQR 405


>gi|81908254|sp|O08815|SLK_RAT RecName: Full=STE20-like serine/threonine-protein kinase;
            Short=STE20-like kinase; AltName: Full=STE20-related
            serine/threonine-protein kinase; Short=STE20-related
            kinase
 gi|2114074|dbj|BAA20077.1| protein kinase [Rattus norvegicus]
          Length = 1206

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 883  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 943  LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             + R Q   R       +++   R+   L ++       +
Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039


>gi|157159914|ref|YP_001457232.1| exonuclease subunit SbcC [Escherichia coli HS]
 gi|170021231|ref|YP_001726185.1| exonuclease subunit SbcC [Escherichia coli ATCC 8739]
 gi|188491739|ref|ZP_02999009.1| exonuclease sbcC [Escherichia coli 53638]
 gi|193065209|ref|ZP_03046282.1| nuclease SbcCD, C subunit [Escherichia coli E22]
 gi|194428843|ref|ZP_03061378.1| nuclease SbcCD, C subunit [Escherichia coli B171]
 gi|209917608|ref|YP_002291692.1| exonuclease subunit SbcC [Escherichia coli SE11]
 gi|218552959|ref|YP_002385872.1| exonuclease subunit SbcC [Escherichia coli IAI1]
 gi|218693857|ref|YP_002401524.1| exonuclease subunit SbcC [Escherichia coli 55989]
 gi|260842595|ref|YP_003220373.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str.
           12009]
 gi|312970490|ref|ZP_07784671.1| exonuclease sbcC [Escherichia coli 1827-70]
 gi|157065594|gb|ABV04849.1| nuclease SbcCD, C subunit [Escherichia coli HS]
 gi|169756159|gb|ACA78858.1| exonuclease SbcC [Escherichia coli ATCC 8739]
 gi|188486938|gb|EDU62041.1| exonuclease sbcC [Escherichia coli 53638]
 gi|192927183|gb|EDV81804.1| nuclease SbcCD, C subunit [Escherichia coli E22]
 gi|194413146|gb|EDX29433.1| nuclease SbcCD, C subunit [Escherichia coli B171]
 gi|209910867|dbj|BAG75941.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE11]
 gi|218350589|emb|CAU96279.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli 55989]
 gi|218359727|emb|CAQ97268.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli IAI1]
 gi|257757742|dbj|BAI29239.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str.
           12009]
 gi|310337139|gb|EFQ02277.1| exonuclease sbcC [Escherichia coli 1827-70]
 gi|320201638|gb|EFW76214.1| Exonuclease SbcC [Escherichia coli EC4100B]
 gi|323160498|gb|EFZ46446.1| exonuclease sbcC [Escherichia coli E128010]
 gi|324016664|gb|EGB85883.1| nuclease sbcCD, subunit C [Escherichia coli MS 117-3]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|328784641|ref|XP_395964.4| PREDICTED: LOW QUALITY PROTEIN: nucleoprotein TPR [Apis mellifera]
          Length = 2326

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 58/205 (28%), Gaps = 4/205 (1%)

Query: 250 ETDWTLADYAADLR--APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
           E + T      D          A E  +  +           +     +   +    +  
Sbjct: 676 EENETKLKQVTDEYDTYKKERAAHERMLGDEVERLRKEAEANSARCCRLKAQLDSANDRF 735

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           N L   + +    +     +       +  + + ++  K           +++  + N++
Sbjct: 736 NLLQSNVTSYKSQIKVLEEKCFNYNVTIGKHEQSLMILKDEALAAQTRLSRAEVQLENLR 795

Query: 368 KNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + RQ + + +  +  E+ V Q  R      +  +  +    E+ +              T
Sbjct: 796 QERQLLRDSEGRLLKEREVYQRERQTQALLRADVESIKASLERVQAEGQLRAEQRLDDAT 855

Query: 426 RIEFILSHKIKSCHTSVSITTRILQ 450
           R    L  +++         +  L+
Sbjct: 856 RECAALRRRLQEEQDRFRELSAHLE 880


>gi|149040345|gb|EDL94383.1| rCG57812, isoform CRA_b [Rattus norvegicus]
          Length = 1203

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 883  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 943  LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             + R Q   R       +++   R+   L ++       +
Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039


>gi|132626321|ref|NP_062222.2| STE20-like serine/threonine-protein kinase [Rattus norvegicus]
          Length = 1203

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 883  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 943  LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             + R Q   R       +++   R+   L ++       +
Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039


>gi|113954217|ref|YP_731649.1| chromosome segregation protein SMC [Synechococcus sp. CC9311]
 gi|113881568|gb|ABI46526.1| chromosome segregation protein SMC [Synechococcus sp. CC9311]
          Length = 1201

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 71/230 (30%), Gaps = 17/230 (7%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            A      ++               I+      +    ++   ++    Q L  +R+ L+R
Sbjct: 887  AHQRWRDEQKELEERRQTLESQQQILQTKFGEERRARDAAEASVAELRQNLQQARWELER 946

Query: 331  LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
            L  E    ++  +         +   + +       +     +   Q  ++Q++K+    
Sbjct: 947  LQEE-RLAIQEQLRSGGIRLEELKPTLPNPLPEIPEEIRHAGLEALQDQLQQLLKRMEAL 1005

Query: 391  --IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR- 447
              + +   E++  L         R+  L    ++L+ RIE + + + ++   +       
Sbjct: 1006 EPVNMLALEELTALEERLGDLGERLDVLSQEREELLLRIETVATLRQEAFMEAFQAVDGH 1065

Query: 448  -------------ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                          LQ     + L+ G T +       + +   ++   +
Sbjct: 1066 FSEIFASLSEGDGKLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1115


>gi|193068718|ref|ZP_03049679.1| nuclease SbcCD, C subunit [Escherichia coli E110019]
 gi|192958081|gb|EDV88523.1| nuclease SbcCD, C subunit [Escherichia coli E110019]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAKFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|300820367|ref|ZP_07100519.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7]
 gi|331666743|ref|ZP_08367617.1| nuclease sbcCD, subunit C [Escherichia coli TA271]
 gi|331676062|ref|ZP_08376774.1| nuclease sbcCD, subunit C [Escherichia coli H591]
 gi|300527152|gb|EFK48221.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7]
 gi|331065967|gb|EGI37851.1| nuclease sbcCD, subunit C [Escherichia coli TA271]
 gi|331076120|gb|EGI47402.1| nuclease sbcCD, subunit C [Escherichia coli H591]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|259046884|ref|ZP_05737285.1| DNA polymerase III, alpha subunit [Granulicatella adiacens ATCC
            49175]
 gi|259036507|gb|EEW37762.1| DNA polymerase III, alpha subunit [Granulicatella adiacens ATCC
            49175]
          Length = 1117

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 22   YHLKHIVESNLSHVCVRGEISGYR---GIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78
              ++ + E         G I   R          AY +L+D    ID +++  TL +I  
Sbjct: 942  QAIQSVFEEGYMRF--VGLIVDIRKISTRKGEKMAYVTLQDASGMIDVVVFPSTLAEIYQ 999

Query: 79   LPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
              ++    L+ G++       ++Q+ +  + P
Sbjct: 1000 HLQQNTMVLMEGRVKR-GQKGQWQLQLNRMYP 1030


>gi|218134790|ref|ZP_03463594.1| hypothetical protein BACPEC_02693 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990175|gb|EEC56186.1| hypothetical protein BACPEC_02693 [Bacteroides pectinophilus ATCC
           43243]
          Length = 90

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 14/43 (32%)

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511
           N+  +    ++     I I F +      V +     ++   +
Sbjct: 38  NDKVVKASYDVKEGDVIEIQFGNKSVKVRVTDIRDTTKKKKPR 80


>gi|166365792|ref|YP_001658065.1| serine protease [Microcystis aeruginosa NIES-843]
 gi|166088165|dbj|BAG02873.1| serine protease [Microcystis aeruginosa NIES-843]
          Length = 426

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNNKR 519
           G+  I + +   IT    +    ++ +   DG+  +  V+   P  +    + +  N  R
Sbjct: 146 GF-IISN-DGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVEASNLPR 203

Query: 520 EKQGTQGEL 528
            K G    L
Sbjct: 204 VKLGNSDSL 212


>gi|327398212|ref|YP_004339081.1| metal dependent phosphohydrolase [Hippea maritima DSM 10411]
 gi|327180841|gb|AEA33022.1| metal dependent phosphohydrolase [Hippea maritima DSM 10411]
          Length = 319

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 37  VRGE---ISG-YRGIHSSGHAY--FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90
           + GE   +S  +     +G  Y    LKD    IDA IW   L  ++   E G    + G
Sbjct: 16  IEGEAFLVSEKHILKARNGDEYVGLKLKDRTGIIDAKIW-NNLLHLKDRFEAGDFVKIRG 74

Query: 91  KITTFPGSSKYQIIIESLI 109
           +   +     +Q+II+ L 
Sbjct: 75  ESNYYND--NWQVIIKDLE 91


>gi|317180229|dbj|BAJ58015.1| outer membrane protein HopK [Helicobacter pylori F32]
 gi|317180650|dbj|BAJ58436.1| outer membrane protein HopK [Helicobacter pylori F32]
          Length = 368

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 15/166 (9%)

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEII---IFRKYRHFNHIINRIKSDFLIHNIQ 367
             A+ +++  L+  R +     +   + L  +   I      F +I N +K+   +   +
Sbjct: 38  SHAIQHNNPFLNQERIKTISNAQNKIYKLNQVKNEITSMPNTFAYINNNLKNHSQLTPTE 97

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              +     Q  ++ I K  +    +    ++A      ++       L  ++K L  + 
Sbjct: 98  MQAEKYY-LQSTLQNIEKIVMLSGGVASNPQLAQALEKMQEPITNPLELAENLKNLEAQF 156

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKN-----------TLKRGY 462
               +  + S  + ++  +  L +    +           TL  GY
Sbjct: 157 AQSQNRMLSSLSSQIAQISNSLNALDPSSYSKNISNMYGVTLNVGY 202


>gi|301773364|ref|XP_002922103.1| PREDICTED: a-kinase anchor protein 13-like [Ailuropoda melanoleuca]
          Length = 2782

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 60/205 (29%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2441 DSHQMNASKGGEKEEGEDGQDLRRTESDGGLKKGGNANLVFMLKRNSEQVVQSVVHLHEL 2500

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R     +   + +       +++K RQ +   Q+  
Sbjct: 2501 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2560

Query: 381  EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q +++  R          +  E++ ++A       + +  + +    ++          
Sbjct: 2561 AQHLEEKRRREREWEARERVLQEREARLAQREQDVRRGQQDLEHERDELQLKKGAYQCDL 2620

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +      L
Sbjct: 2621 ERL-RAAQKQLEREQEQLRRDAERL 2644


>gi|124028238|ref|YP_001013558.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456]
 gi|123978932|gb|ABM81213.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456]
          Length = 835

 Score = 40.1 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/204 (8%), Positives = 53/204 (25%), Gaps = 22/204 (10%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           + DY    R             + ++       +E     I     +   N +  +    
Sbjct: 568 IIDYDVVARFAFSLLQLAWNEGIHDNTNPLDEYMEIMWYYIWHHEGRRWRNGVFMMGPDF 627

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL--IHNIQKNRQH 372
            +    +     +L R+   L   +++ +                        I + ++ 
Sbjct: 628 AHWFGIVDTVLDKLGRMTNYLYIAMKVRLLETELQALKQAAAGAPYTPELAAQIAELQKE 687

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +   +Q +  +            K +I  L       +  +  L T +  L+        
Sbjct: 688 LETLKQQLAAL-----EAQVPALKSQIQSLEAGYSSVEGELGTLKTDVSTLL-------- 734

Query: 433 HKIKSCHTSVSITTRILQSFAYKN 456
                    +   ++ L++ + + 
Sbjct: 735 -------QQLDELSKQLEALSPQA 751


>gi|329938667|ref|ZP_08288063.1| single-strand DNA-binding protein [Streptomyces griseoaurantiacus
           M045]
 gi|329302158|gb|EGG46050.1| single-strand DNA-binding protein [Streptomyces griseoaurantiacus
           M045]
          Length = 200

 Score = 40.1 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|149040344|gb|EDL94382.1| rCG57812, isoform CRA_a [Rattus norvegicus]
          Length = 1234

 Score = 40.1 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/181 (9%), Positives = 53/181 (29%), Gaps = 10/181 (5%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLD 329
             +       L+     ++      + +      N    ++  +  + + L     + R +
Sbjct: 890  RLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEVINEVEKAPKELRKELMKRRKE 949

Query: 330  RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
             L +      +  + ++ +  +  + +I            R+ +  KQQ +         
Sbjct: 950  ELAQSQHAQEQEFVQKQQQELDGALKKIIQQQKAELANIERECLNNKQQLLRAREAAIWE 1009

Query: 390  YIFLEKKEKIAIL--------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
                  +EK  +L         + R Q   R       +++   R+   L ++       
Sbjct: 1010 LEERHLQEKHQLLKQQLKDQYFIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERAR 1069

Query: 442  V 442
            +
Sbjct: 1070 L 1070


>gi|254416225|ref|ZP_05029979.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC
           7420]
 gi|196176907|gb|EDX71917.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC
           7420]
          Length = 687

 Score = 40.1 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 46/193 (23%), Gaps = 5/193 (2%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS----DQTLSCS 324
            A        E +      L+ +    I  L         + +  +       +Q L   
Sbjct: 62  TAIAQVYQNLEPIHEQFSQLDIQTQERISHLKDVNAQQYKAAIAKIHQLIEPLNQQLIQL 121

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             R      +     +        H   +I+ ++   L    +  +Q   + Q  ++Q+ 
Sbjct: 122 DSRSQDQLEQFNSANQQQHAEIIAHIYQLIHPLQL-HLTQLDETTQQRDRQTQTQLDQLH 180

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
                           ++  L ++             +     +      I      +  
Sbjct: 181 ALQHLQAEGILAYINPLIDTLNQELIRLDSQTQQRFAEFSVANQQQHDAIILQVQQQLEP 240

Query: 445 TTRILQSFAYKNT 457
               L +   + T
Sbjct: 241 FKTQLDTLTPQVT 253


>gi|332221013|ref|XP_003259652.1| PREDICTED: liprin-alpha-2 isoform 2 [Nomascus leucogenys]
          Length = 1232

 Score = 40.1 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + +  +     A  ++I+      
Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 203

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 204 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 263

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 264 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 322

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 323 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 382

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 383 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 425

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 426 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479


>gi|324010123|gb|EGB79342.1| nuclease sbcCD, subunit C [Escherichia coli MS 57-2]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L  + +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEDEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|296216282|ref|XP_002754499.1| PREDICTED: centrosomal protein of 164 kDa [Callithrix jacchus]
          Length = 1455

 Score = 40.1 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H       + S       +
Sbjct: 786 AKHQEVVSSLQKKIEEAQQKEETQLQKCLGQVEHRVHQKAYHMIEYEQELSSLL----RE 841

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A    LR +    +      +++   R 
Sbjct: 842 KRQEVEEEHERRLDKMKEEHHQVMAKAREQYEAEERKLRAELLGHLTGELERLQRAHERE 901

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +     ++++          R L   
Sbjct: 902 LETVRQDQHNRLEDLRRRHREQERKLHDL 930


>gi|154252903|ref|YP_001413727.1| protease Do [Parvibaculum lavamentivorans DS-1]
 gi|154156853|gb|ABS64070.1| protease Do [Parvibaculum lavamentivorans DS-1]
          Length = 487

 Score = 40.1 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 5/68 (7%)

Query: 442 VSITTRILQSFAYKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIV 498
                   +S   +    L  G+    D +   IT    +    RI + F DG    A V
Sbjct: 83  FEEFLEQQESMRPQRVQSLGSGFVI--DPDGIVITNNHVIEGADRIEVTFTDGTTLPATV 140

Query: 499 INKAPPKE 506
               P  +
Sbjct: 141 AGTDPKTD 148


>gi|332221015|ref|XP_003259653.1| PREDICTED: liprin-alpha-2 isoform 3 [Nomascus leucogenys]
          Length = 1257

 Score = 40.1 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + +  +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|331661769|ref|ZP_08362692.1| exonuclease SbcC [Escherichia coli TA143]
 gi|331060191|gb|EGI32155.1| exonuclease SbcC [Escherichia coli TA143]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|332221011|ref|XP_003259651.1| PREDICTED: liprin-alpha-2 isoform 1 [Nomascus leucogenys]
          Length = 1156

 Score = 40.1 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + +  +     A  ++I+      
Sbjct: 90  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 147

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423


>gi|126306346|ref|XP_001367142.1| PREDICTED: similar to translocated promoter region (to activated
           MET oncogene), [Monodelphis domestica]
          Length = 2364

 Score = 40.1 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 87/256 (33%), Gaps = 21/256 (8%)

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEM--------AVPVKEHLQSSLINLEARLNNIIIR 298
           I +E    L +   DLR+     + ++         +          I      N  +  
Sbjct: 693 IQNEQSEKLQEQITDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTA 752

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
             + +   +N++ + L  +++ L+ +  R + L +E E      +    +  + +  +  
Sbjct: 753 TTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRG 812

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
            + L+ N+Q  +  +   +   +Q +   +  +  E  +    L    EQ          
Sbjct: 813 QNLLLTNLQTIQGILERSETETKQRLNNQIEKLEREIAQLKKKLENEVEQRHTLTRNQDV 872

Query: 419 HIKKLITRIEFILSHKIKSC-------------HTSVSITTRILQSFAYKNTLKRGYTSI 465
            +     ++E  ++  + +                 +S     L S + +  L +G ++ 
Sbjct: 873 QLLDTKRQLETEINRHLNTKELLKNAQKEIVTLKQQLSNIEAQLASQSAQRALGKGQSTT 932

Query: 466 QDTNNNFITQKRNLAT 481
           ++  ++ I+Q R    
Sbjct: 933 KEDIDDLISQLRQAEE 948


>gi|331671944|ref|ZP_08372740.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280]
 gi|331070933|gb|EGI42292.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|194224685|ref|XP_001494184.2| PREDICTED: similar to Zinc finger protein 367 [Equus caballus]
          Length = 389

 Score = 40.1 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/277 (8%), Positives = 68/277 (24%), Gaps = 15/277 (5%)

Query: 184 DECPKEIANAILQLNTLKEGRTCPRP--DIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
                      L          C R    + ++    G++ +   +    +        +
Sbjct: 113 RGIAPVCVMCELTGTLRNPRSHCLRGIAPVCVMCELTGTLRNPRSYCLRAVAPVCVMCEL 172

Query: 242 PIISAI--GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299
             I  +  G       AD   DL       ++ +   +   +     +L+A         
Sbjct: 173 TNIKLMQDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGER 232

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRI 357
               +       KA   S Q  +  R      P        L            H   R+
Sbjct: 233 --PYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARL 290

Query: 358 KSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           K +     + K++    +   + + +  +   +     K + +      ++     +   
Sbjct: 291 KREEPTDALSKHQAVDNQAAAEWLAKYWETREQRTPSLKGKLVQKADQEQQDPLEYLQSD 350

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
               +      +     +++     +     +++   
Sbjct: 351 EEDDE------KSGAQRRLQEQRERLHGALALIELAN 381


>gi|77165172|ref|YP_343697.1| chromosome segregation protein SMC [Nitrosococcus oceani ATCC
           19707]
 gi|254434247|ref|ZP_05047755.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27]
 gi|76883486|gb|ABA58167.1| condensin subunit Smc [Nitrosococcus oceani ATCC 19707]
 gi|207090580|gb|EDZ67851.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27]
          Length = 1170

 Score = 40.1 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/177 (8%), Positives = 45/177 (25%), Gaps = 2/177 (1%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                    +           +   ++     L    +    ++  L  +   ++    E
Sbjct: 716 CQSALARVEAKQEQHQLRQRQVQEELEEIQTHLAEDERERQLAETCLQEALMDMESFAEE 775

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            E  ++     +            +   +H ++     +    +  +Q V Q  R     
Sbjct: 776 REQLIKQRDRLRASLNQLRGETGAAKDNLHRLEMEGHSLQTTLEATQQAVIQIRREYNEL 835

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            + + A+   L                 L  R+   +  ++      V+     L++
Sbjct: 836 LQRREALEVTLASGETPLQELQTQLETHLQQRM--SIERQLNEARERVTRLESQLRT 890


>gi|39970965|ref|XP_366873.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15]
 gi|149210495|ref|XP_001522622.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15]
 gi|86196677|gb|EAQ71315.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15]
 gi|145017219|gb|EDK01582.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15]
          Length = 1043

 Score = 40.1 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 19/195 (9%), Positives = 58/195 (29%), Gaps = 10/195 (5%)

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
           R PTP    +   P   +   S    E        +    +      L +          
Sbjct: 284 RQPTPPPQPKNEEPGVINDFWSNQLEEQNREYEAQQRALEERQRQQMLAQEQAQMLAQQQ 343

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
             + +     ++   +  ++  +        +  ++ + L    Q  +  ++ +Q     
Sbjct: 344 FEQQQRALAEQQQREHQALLEQQARMATQGRLAELEQENLRARAQYEQDQLMLQQ----- 398

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
              Q ++ +  E +   + L        ++I  L   +    ++ E +     +  H  +
Sbjct: 399 -YDQRVKALEGELQHIQSSLGQQMNSKDDQIRALQEQLNTWRSKYEALAKLYSQLRHEHL 457

Query: 443 SITTR----ILQSFA 453
            +  +     L++ +
Sbjct: 458 DLLQKFKSVQLKAAS 472


>gi|284920203|emb|CBG33262.1| exonuclease SbcC [Escherichia coli 042]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|218688259|ref|YP_002396471.1| exonuclease subunit SbcC [Escherichia coli ED1a]
 gi|218425823|emb|CAR06629.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli ED1a]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTTLAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|222032192|emb|CAP74931.1| exonuclease sbcC [Escherichia coli LF82]
 gi|312944974|gb|ADR25801.1| exonuclease subunit SbcC [Escherichia coli O83:H1 str. NRG 857C]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|195388716|ref|XP_002053025.1| GJ23654 [Drosophila virilis]
 gi|194151111|gb|EDW66545.1| GJ23654 [Drosophila virilis]
          Length = 1981

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 34/354 (9%), Positives = 98/354 (27%), Gaps = 31/354 (8%)

Query: 113  SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL 172
             G L  A  +    +    +     +  +  + ++     SP       +LQ    R  L
Sbjct: 963  LGALHDADFQLSGDISAADIVDGYREKTLSLLWQLCYKFRSPKFHAAARVLQVWWRRRWL 1022

Query: 173  RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL----ARGGGSIEDLWHFN 228
             V I     +      +      Q+    +     R   +I+     R   + + L+   
Sbjct: 1023 HVFIRRRIRERAAIRIQAVFRGHQMRKYAKLYRVERLRAVIVLQKYTRRYLAQKHLYQVY 1082

Query: 229  DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
              ++       +I +     H+            +      +A     +      S   L
Sbjct: 1083 QSIV-------TIQLWWRANHQG------RLCRQQFLHLRESAIFLQRIWRRRLFSRKLL 1129

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
             A     + R    K N   + ++    S +     R    R  + +      +  +   
Sbjct: 1130 AAATTARLQR--DQKHNAAAACIQMCWRSYRLAKKQRETYIRERQLIIFVQRSVRNKWLM 1187

Query: 349  HFNHIINRIKSDF---LIHNIQKNRQHILEKQQHIEQI-----VKQHLRYIFLEKKEKIA 400
                   ++       L    +   + +  ++ ++ ++     +++  R     ++++  
Sbjct: 1188 QHTRDQFQLLRQSALVLQRRYRARLKMLRTRRNYLHELQCIIDIQRRWRATLEMRRQRAY 1247

Query: 401  ILHM----LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
               +    +  Q + R        ++   R++       +     +++ T    
Sbjct: 1248 YRKLKACTILLQIQYRARLQMRQQQQRFLRLKAATLVLQQRYRARLNMLTARRN 1301


>gi|126321136|ref|XP_001368990.1| PREDICTED: similar to dystrobrevin, alpha, isoform 1 [Monodelphis
           domestica]
          Length = 743

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 46/155 (29%), Gaps = 10/155 (6%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            N  + L       +       +   +         +         F I   ++ RQ I 
Sbjct: 418 SNPSRMLDSPNRLDEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANKQQRQLIA 477

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432
           E +    +I+++  R     ++         ++       +  L     +L  R+  +  
Sbjct: 478 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 537

Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
            + +     +    ++L++        +  +T+ R
Sbjct: 538 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|110640658|ref|YP_668386.1| exonuclease subunit SbcC [Escherichia coli 536]
 gi|191173503|ref|ZP_03035030.1| nuclease SbcCD, C subunit [Escherichia coli F11]
 gi|300997417|ref|ZP_07181757.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1]
 gi|110342250|gb|ABG68487.1| exonuclease SbcC [Escherichia coli 536]
 gi|190906212|gb|EDV65824.1| nuclease SbcCD, C subunit [Escherichia coli F11]
 gi|300304236|gb|EFJ58756.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1]
 gi|324010707|gb|EGB79926.1| nuclease sbcCD, subunit C [Escherichia coli MS 60-1]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|323191313|gb|EFZ76576.1| exonuclease sbcC [Escherichia coli RN587/1]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|320197168|gb|EFW71785.1| Exonuclease SbcC [Escherichia coli WV_060327]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTTLAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|254414789|ref|ZP_05028553.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178278|gb|EDX73278.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 1006

 Score = 40.1 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 55/201 (27%), Gaps = 13/201 (6%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           +   ++    + H  +       R   I    ++     L  + +  P     L      
Sbjct: 615 SQLQQLNYNEQTHALARGEVDRWRWAEIRQAKLEDAQRRLEKIQEQKPQLQAQLDQLNQS 674

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           L+ L       L+  +         I   + +   +    ++ Q    + Q + +  + +
Sbjct: 675 LEELQTTSP--LKQQLDAIESQITEIGYNLDTHNQLRTALRHAQSWQLRHQELTKAQEHY 732

Query: 388 LR--YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL--ITRIEFILSHKIKSCHTSVS 443
            +         + +A     RE    ++  +   +++    +R    L  +I      + 
Sbjct: 733 PQLCQRLDSLTQTLAQRQGDRETLNTQLAEIVKQLEQYPDTSRDIQSLEQRILQRRRQLD 792

Query: 444 -------ITTRILQSFAYKNT 457
                     + L       T
Sbjct: 793 EHLSQIGRLQQRLTQLDTLKT 813


>gi|195118064|ref|XP_002003560.1| GI17983 [Drosophila mojavensis]
 gi|193914135|gb|EDW13002.1| GI17983 [Drosophila mojavensis]
          Length = 2091

 Score = 40.1 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 12/192 (6%), Positives = 54/192 (28%), Gaps = 3/192 (1%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D  + T    +   +          ++        + +  +        +          
Sbjct: 1378 DSHSTTTMQPSTANIVANYPRLKRYMDDGYLNYERLSKYFEANSEWQKEMDCQTLGLTIV 1437

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            +     +++ L        +I +           +    + L   + +      ++QQ  
Sbjct: 1438 IQFMSKQMEMLSCRESKA-KISLEETMALLQQTQH--SCEELRQQLHEKDVEWSQRQQEW 1494

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            E +  + L+    + +E   +      + + ++       K+ +      ++H+++    
Sbjct: 1495 EHLQLRELQQAHEKVQEVQLLAKERFRELEAQLVAKDEEKKQALQTYHQEIAHQLRHKQQ 1554

Query: 441  SVSITTRILQSF 452
             ++   + +   
Sbjct: 1555 QLTAAEQQVLQL 1566


>gi|21222314|ref|NP_628093.1| single-stranded DNA-binding protein [Streptomyces coelicolor A3(2)]
 gi|37999820|sp|Q9X8U3|SSB2_STRCO RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
           AltName: Full=Helix-destabilizing protein 2
 gi|257471775|pdb|3EIV|A Chain A, Crystal Structure Of Single-Stranded Dna-Binding Protein
           From Streptomyces Coelicolor
 gi|257471776|pdb|3EIV|B Chain B, Crystal Structure Of Single-Stranded Dna-Binding Protein
           From Streptomyces Coelicolor
 gi|257471777|pdb|3EIV|C Chain C, Crystal Structure Of Single-Stranded Dna-Binding Protein
           From Streptomyces Coelicolor
 gi|257471778|pdb|3EIV|D Chain D, Crystal Structure Of Single-Stranded Dna-Binding Protein
           From Streptomyces Coelicolor
 gi|4808403|emb|CAB42735.1| putative single-strand DNA-binding protein [Streptomyces coelicolor
           A3(2)]
          Length = 199

 Score = 40.1 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|193785708|dbj|BAG51143.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 40.1 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
            T         +         L       +  + ++++   + L+K            R+
Sbjct: 297 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 354

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381
            L R   +    ++    R          + K+        + +  +   ++ +      
Sbjct: 355 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 414

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +Q  +     ++E+        +Q +     +   + +  + +  +   + + CH  
Sbjct: 415 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 474

Query: 442 VSITTRILQSFA 453
           V   T+ L++  
Sbjct: 475 VEHETQKLKALD 486


>gi|187917992|ref|YP_001883555.1| single-strand DNA binding protein [Borrelia hermsii DAH]
 gi|119860840|gb|AAX16635.1| single-strand DNA binding protein [Borrelia hermsii DAH]
          Length = 145

 Score = 40.1 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 22/58 (37%), Gaps = 10/58 (17%)

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP---------GSSKYQIIIESLIPSGS 113
           D +I+      +    ++G + +V G +  +            SK  ++++ +   G 
Sbjct: 53  DCVIFAKRAESLSVFLKKGKQVVVSGSLK-YESWQDKNTGDKRSKCSVLVDEIQMFGM 109


>gi|145497947|ref|XP_001434962.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402090|emb|CAK67565.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1170

 Score = 40.1 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/176 (8%), Positives = 53/176 (30%), Gaps = 6/176 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLDRLPR 333
             +E LQ+    + ++    + +  K +            + ++ L     + +     +
Sbjct: 814 QEEEALQNLEYQIFSKFQQQMEQRTKQENQRKIQSQLEFRSKEKELLDQIKQEQWKMDSQ 873

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           + +  +E +   + +    + N  + + + +  + +      K   +E+      +    
Sbjct: 874 QQQIKVEQLKQLRMQQLQELENEAQIEEVEYQERIHSFQQDLKMIQLER----EKKLRDQ 929

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              E+I+         K           +   + E  +    K     + +  + L
Sbjct: 930 MFSEQISKEEQQLRDKKQVEDKKRQSSVQRRQQFEQEMERMAKQHQEKLRMQEQQL 985


>gi|14601261|ref|NP_147796.1| surface layer protein [Aeropyrum pernix K1]
 gi|5104891|dbj|BAA80205.1| surface layer protein [Aeropyrum pernix K1]
          Length = 533

 Score = 40.1 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/114 (9%), Positives = 35/114 (30%), Gaps = 8/114 (7%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L   +    +    +   ++   L   ++     +   +  + Q  +             
Sbjct: 312 LSGAVDAMSQQLQALAEDLE--SLSSRVEDLEARVGSVEDRLSQAEEDIDSLTTS----- 364

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +  L    E    R+      ++ L TR++  ++  ++     ++     LQ+ 
Sbjct: 365 LDSLRTELEDLSTRLAEAQASLEDLNTRLDQ-VASTLQQLQQRLATAEESLQAL 417


>gi|331645567|ref|ZP_08346671.1| exonuclease SbcC [Escherichia coli M605]
 gi|331045729|gb|EGI17855.1| exonuclease SbcC [Escherichia coli M605]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 H-----NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 ITEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|269958122|ref|YP_003327911.1| single-strand binding protein [Xylanimonas cellulosilytica DSM
          15894]
 gi|269306803|gb|ACZ32353.1| single-strand binding protein [Xylanimonas cellulosilytica DSM
          15894]
          Length = 189

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93
          KD  +  +   +W+     +     +G+  +V G++T
Sbjct: 48 KDGDALFMRCSVWREAAENVAESLTKGMRVIVQGRLT 84


>gi|148269803|ref|YP_001244263.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1]
 gi|147735347|gb|ABQ46687.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1]
          Length = 336

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            +L+D    + A+ W       +   +EG    V G++  F      QI +++
Sbjct: 52  MTLEDRTGTVRAVDW-YNAELNDQRLKEGTVVRVKGRVVFFENR--IQINVDN 101


>gi|257898652|ref|ZP_05678305.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           Com15]
 gi|257836564|gb|EEV61638.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           Com15]
          Length = 744

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 52  HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSKYQIIIESLI 109
           H  F L D  S++DA+ +       E      +   V+GK++   + G  K Q+++    
Sbjct: 480 HLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWNGRKKPQLMVSDFA 536

Query: 110 PSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167
             G           + + +  E+ L+     + + F+P+ I   T+     +  I   I 
Sbjct: 537 VGGLQVFDWRAKRFREQSRTYEDSLYLAFDSSTLKFVPERIQE-TAIVFEGMDSIHAVIE 595

Query: 168 CRFPLRVIIFPVK 180
            R P  ++I    
Sbjct: 596 KRKPKSLVIMDCP 608


>gi|257896024|ref|ZP_05675677.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           Com12]
 gi|257832589|gb|EEV59010.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           Com12]
          Length = 765

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 40  EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96
           +++  + I ++  H  F L D  S++DA+ +       E      +   V+GK++   + 
Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544

Query: 97  GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154
           G  K Q+++      G           + + +  E+ L+     + + F+P+ I   T+ 
Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603

Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180
               +  I   I  R P  ++I    
Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629


>gi|227551359|ref|ZP_03981408.1| recombination protein J [Enterococcus faecium TX1330]
 gi|227179478|gb|EEI60450.1| recombination protein J [Enterococcus faecium TX1330]
          Length = 765

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 40  EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96
           +++  + I ++  H  F L D  S++DA+ +       E      +   V+GK++   + 
Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544

Query: 97  GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154
           G  K Q+++      G           + + +  E+ L+     + + F+P+ I   T+ 
Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603

Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180
               +  I   I  R P  ++I    
Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629


>gi|124027865|ref|YP_001013185.1| hypothetical protein Hbut_0993 [Hyperthermus butylicus DSM 5456]
 gi|123978559|gb|ABM80840.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
          Length = 448

 Score = 40.1 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 43/123 (34%), Gaps = 3/123 (2%)

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             +E+   L+  +    +    +   +    L  ++    + +  +   I++        
Sbjct: 292 QLQEMLGELQSQLSSLAQQLGELSKGLS--VLAQDLNAKIEKLNSEITKIKEAYATKDEL 349

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                    + +   +   + +I  L+  I KL  R++ + S  I+    ++   T  LQ
Sbjct: 350 NTAINNVN-SRIDQEKASLEQQISALNEEINKLKQRLDQLESATIQQLSNNIQQLTSELQ 408

Query: 451 SFA 453
           S +
Sbjct: 409 SLS 411


>gi|330910189|gb|EGH38699.1| exonuclease SbcC [Escherichia coli AA86]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|321470448|gb|EFX81424.1| hypothetical protein DAPPUDRAFT_317679 [Daphnia pulex]
          Length = 1734

 Score = 40.1 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/221 (9%), Positives = 69/221 (31%), Gaps = 32/221 (14%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLE-----ARLNNIIIRLIKYKINTLNSLLKALPN 316
             +P PT   +M  PV    +      +      +    +    + +        +    
Sbjct: 474 ATSPPPTDDMKMMSPVSFEDKRKENFDKGQAELDKRRKALAEQQRREQEERERKEREEYE 533

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
             + L   + R  +   E +   +  I             ++         + ++ +  +
Sbjct: 534 RKEKLRLEQERRQQAELEKKLAKQREIE--MEKEEQRRKMLEQREAARKEMERQRQLEWQ 591

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--------- 427
           +Q ++++++Q  +      +EK+A+L    ++ +  +  L   + +L ++I         
Sbjct: 592 KQRLQELLQQRQKE-----QEKVALLRANHQRLQTELSVLDDRVMELSSKIIETRTGVAE 646

Query: 428 -----------EFILSHKIKSCHTSVSITTRILQSFAYKNT 457
                            ++ +  T +    + L + + +  
Sbjct: 647 TKNTIDGMRTTRDTQMAQLSTLKTQLREQNQRLLTVSQEKV 687


>gi|315299627|gb|EFU58875.1| nuclease sbcCD, subunit C [Escherichia coli MS 16-3]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|73955594|ref|XP_546602.2| PREDICTED: similar to LYST-interacting protein LIP8 isoform 1
           [Canis familiaris]
          Length = 903

 Score = 40.1 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            LE +    +            S  + L      L   R    +  R++E     +    
Sbjct: 322 ELEQQRCRSLQEERDEARAGQLSEHRQLETLKLALEEERQAWVQQERQMEGRYGALQEEV 381

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                      + +       + +  +++ +    +      R      + +++++    
Sbjct: 382 QAQLEKEKENTQREAQAAREAQKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARY 441

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ   
Sbjct: 442 ESQRIQMESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLN 490


>gi|327285129|ref|XP_003227287.1| PREDICTED: x-linked retinitis pigmentosa GTPase
           regulator-interacting protein 1-like [Anolis
           carolinensis]
          Length = 1200

 Score = 40.1 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 7/148 (4%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           D  L  SR  ++RL        E+ + R+           +S       ++ ++     Q
Sbjct: 219 DHVLEGSRAEMERLSHHSLVLAELGLDRESTSPLGKATDPESTHYQQRHEEVQERRAAIQ 278

Query: 378 Q-----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                  ++++++     + L K +   +        +     L +  + L+ ++E  L+
Sbjct: 279 DNVELIRLQKLLRTKNSELVLTKAQFAGLQEAYETHLQQNQDALRSTSEALLAQVEE-LN 337

Query: 433 HKIKSCHTSVSITTRILQSFAYKN-TLK 459
             +K     V+     L+  +    TLK
Sbjct: 338 AHLKEETQKVTALESQLEILSPLQGTLK 365


>gi|293378804|ref|ZP_06624961.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           PC4.1]
 gi|292642597|gb|EFF60750.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           PC4.1]
          Length = 765

 Score = 40.1 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 40  EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96
           +++  + I ++  H  F L D  S++DA+ +       E      +   V+GK++   + 
Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544

Query: 97  GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154
           G  K Q+++      G           + + +  E+ L+     + + F+P+ I   T+ 
Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603

Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180
               +  I   I  R P  ++I    
Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629


>gi|281347972|gb|EFB23556.1| hypothetical protein PANDA_019624 [Ailuropoda melanoleuca]
          Length = 1900

 Score = 40.1 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 67/231 (29%), Gaps = 23/231 (9%)

Query: 227 FNDEMIVRAIANSSIPIISAI-----GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
           F D  +  A   +++   S +     GH       D         P    E     +   
Sbjct: 286 FADFEMGWAGGQAALGPCSQVPAPIPGHFQATPQEDV-----ENPPAILGEPERQQRVQQ 340

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
             S ++ + +    + +  + K      L   L  +    +       RL        ++
Sbjct: 341 LESELSKKRKKCESLEQEARKKQRRCEELELQLREAQNENARLVEENSRLSGRATEKEQV 400

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
                      +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A 
Sbjct: 401 EWENAELRGQLLGVTQERDSALRKSQGLQSKLEGLEQVLKHMREAAQRRRQLEVEHEQAR 460

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           L +  +Q + R             R++   +   +    +V +    L S 
Sbjct: 461 LSLQEKQEEVR-------------RLQQAQAEAKREHEGAVQLLESTLDSM 498


>gi|29830831|ref|NP_825465.1| single-stranded DNA-binding protein [Streptomyces avermitilis
           MA-4680]
 gi|37999531|sp|Q82FG5|SSB1_STRAW RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1;
           AltName: Full=Helix-destabilizing protein 1
 gi|29607944|dbj|BAC72000.1| putative single-stranded DNA-binding protein [Streptomyces
           avermitilis MA-4680]
          Length = 202

 Score = 40.1 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|297627498|ref|YP_003689261.1| Single-strand binding protein [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
 gi|296923263|emb|CBL57860.1| Single-strand binding protein [Propionibacterium freudenreichii
          subsp. shermanii CIRM-BIA1]
          Length = 188

 Score = 40.1 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          KD  +  ++  +W+     +     +G+  +V G++
Sbjct: 48 KDGEALFLNCAVWRQAAENVAESLTKGMRVIVQGRL 83


>gi|71280402|ref|YP_271665.1| chain length determinant family protein [Colwellia psychrerythraea
           34H]
 gi|71146142|gb|AAZ26615.1| chain length determinant family protein [Colwellia psychrerythraea
           34H]
          Length = 528

 Score = 40.1 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 19/185 (10%)

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
             I        N +   + +  L     +    ++E  +++E + K     I     +  
Sbjct: 257 NSIQTTYDDRINELEVLLDN--LKLRYTEKHPDVIETSRNLEHLNKLRSSEIEKYLAQNN 314

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY----- 454
                L+  + N +          +  +   L+ +  +    +      + +        
Sbjct: 315 ENTGSLKRLSANPVIQEVQIHVNQLENLIASLNVRADNYRQRIIELENRVHTL-PEIEAE 373

Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD---GQANAIVINKAPPKEQPTKK 511
              L RGY   ++     +++K       +      D    +    VI+   P  + TK 
Sbjct: 374 LIALNRGYGITKEKYEELLSRKETAQLAQQ-----ADETTDKIQFRVID---PPRKATKP 425

Query: 512 CQLHN 516
                
Sbjct: 426 SGPKR 430


>gi|269469110|gb|EEZ80658.1| DNA polymerase III, alpha subunit [uncultured SUP05 cluster
            bacterium]
          Length = 1150

 Score = 40.1 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 25   KHIVESNLSHVCVRGEISGYRGIH-SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPE 81
            K  V  N   V V   IS  R I   SG    S+   D  +++ A+I+   L  +     
Sbjct: 980  KDTVLRNNKEVRVLALISELRYITTRSGDQMASIIIEDGSTKLSAVIFPRALGPLSDKLI 1039

Query: 82   EGIEFLVIGKITTFPGSSK-YQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
                 ++  KI         YQ+I++ +             + K K+  + LF+ 
Sbjct: 1040 ANEIVVISAKIKKNKKFGDEYQLIVDEIDSF---DSFFKSVEIKLKVEHQTLFNQ 1091


>gi|268317884|ref|YP_003291603.1| hypothetical protein Rmar_2336 [Rhodothermus marinus DSM 4252]
 gi|262335418|gb|ACY49215.1| hypothetical protein Rmar_2336 [Rhodothermus marinus DSM 4252]
          Length = 265

 Score = 40.1 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/161 (7%), Positives = 42/161 (26%)

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
           +  L  +   +     +   +            ++ L   + R   L  ++     +   
Sbjct: 102 MAELIEQARALQEEAERLSRSVETWRQVRTAALEEHLEALQQRAAALSEQVRLLPRLEWE 161

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
              RH       +          +    +   +        +  + I   +++   +   
Sbjct: 162 MYLRHVQQQDAELARQIAEEWHWEETLQLQAMRIRQMPEGPEREQAIAELRRQLEQVFER 221

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
            +E  +  I  L   ++ L  R+     ++ +     +   
Sbjct: 222 KQENRRREIARLEQQLRLLRARLSERERYRQQIIEQRLREL 262



 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 41/149 (27%), Gaps = 6/149 (4%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            + +++  L    + L     RL R            +             +     +  
Sbjct: 97  RMEAVMAELIEQARALQEEAERLSRSVETWRQVRTAALEEHLEALQQRAAALSEQVRLLP 156

Query: 366 IQKNRQHILEKQQH-----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
             +   ++   QQ       +   + H       +  +I  +    E+ +  I  L   +
Sbjct: 157 RLEWEMYLRHVQQQDAELARQIAEEWHWEETLQLQAMRIRQMPEGPER-EQAIAELRRQL 215

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +++  R +     +I      + +    L
Sbjct: 216 EQVFERKQENRRREIARLEQQLRLLRARL 244


>gi|261879120|ref|ZP_06005547.1| DNA helicase RecG [Prevotella bergensis DSM 17361]
 gi|270334216|gb|EFA45002.1| DNA helicase RecG [Prevotella bergensis DSM 17361]
          Length = 700

 Score = 40.1 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 28  VESNLSHVCVRGEISGYRGIHSSG-------HAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80
           +   +  V V+G+I  +     S        H  F+  D    +D + ++G    +    
Sbjct: 55  LSGEMPFVQVKGKILSFEEFPMSARKKRVVAH--FT--DGFGIVDLVWFRG-AQYVYKNY 109

Query: 81  EEGIEFLVIGKITTFPGSSKYQI 103
           + G E++V GK + +    +YQ 
Sbjct: 110 KVGEEYIVFGKPSVY--QGRYQF 130


>gi|301025455|ref|ZP_07189002.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1]
 gi|300395970|gb|EFJ79508.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1]
          Length = 1047

 Score = 40.1 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAVEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|212709804|ref|ZP_03317932.1| hypothetical protein PROVALCAL_00852 [Providencia alcalifaciens DSM
           30120]
 gi|212687615|gb|EEB47143.1| hypothetical protein PROVALCAL_00852 [Providencia alcalifaciens DSM
           30120]
          Length = 1479

 Score = 40.1 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 9/179 (5%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +      L +L     +  +   + K       L AL         +  + ++  + ++
Sbjct: 424 NRARELCQLPDLSIENVDEWLETFEAKEQQATEALLALEQKMSVADAAHSQFEQAYQLVK 483

Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
             L  +            + +      L   +Q  R  + E QQ ++             
Sbjct: 484 AMLGDVSRGDAYQHARTLLRDWSSQQHLAERVQPLRMQLSELQQRLDSQRNAEKLLSEFC 543

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448
           K+   ++     +     +  L   +     +    R++  +  +++     +S  +  
Sbjct: 544 KRYGQSVEPDELDALMAELEILQEELSTGVNESGEKRMQ--MRQELEQIRQRISQLSAK 600


>gi|54295457|ref|YP_127872.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens]
 gi|53755289|emb|CAH16783.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens]
          Length = 1164

 Score = 40.1 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 52/179 (29%), Gaps = 1/179 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A+  +E  +  L N   ++      + +        L      + Q     R+       
Sbjct: 306 AIQQQEREKKRLENDRQQMQVDSQLIEEQLKLDNEELHNCKLKAQQLEEHLRHLKMEFKE 365

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +     E    +          + KS+ + +  Q  +  +   +Q   Q++ +  +    
Sbjct: 366 QESLWQEKQKEQSQWEKIWQEVQTKSNTIKNQYQLTQAKLQHLEQKRHQVLVRLEKLNLE 425

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +    +  L   + + + +   L    +    ++      +       +  T + L + 
Sbjct: 426 QSAILLDDLQKNKIELQEKHSQLKETQEFDEEQLRQANETQ-SDLQNQLQNTEQQLHAL 483


>gi|302552666|ref|ZP_07305008.1| single-strand binding protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470284|gb|EFL33377.1| single-strand binding protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 195

 Score = 40.1 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|194380946|dbj|BAG64041.1| unnamed protein product [Homo sapiens]
          Length = 1048

 Score = 40.1 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 861  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKSRKKEEQEFVQKQQQELDGS 920

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 921  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 977

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 978  FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1017


>gi|193215249|ref|YP_001996448.1| ATP-dependent DNA helicase RecG [Chloroherpeton thalassium ATCC
           35110]
 gi|193088726|gb|ACF14001.1| ATP-dependent DNA helicase RecG [Chloroherpeton thalassium ATCC
           35110]
          Length = 711

 Score = 40.1 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%)

Query: 56  SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-- 113
           SL D   RID + ++G    +  +  EG    V GKI  F  +   Q+    + P     
Sbjct: 87  SLYDKTGRIDLVWFQGAN-YLSKMLREGDALAVHGKIGFF--NGTPQL----MHPDFDKL 139

Query: 114 -GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL 172
            G   +  +  K       LF+     P+  +P+ +         ++R I++ +  +   
Sbjct: 140 NGAERSDDDDLKNDF---ELFNTGKIVPLYSLPEAL-KRGGLNSRIMRRIVRNLLDKSLG 195

Query: 173 RV-IIFPVKVQGDECPKEIANAILQLN 198
            +    P  +  +     +A A  Q++
Sbjct: 196 HIEENLPASICENYRLMPLAMAYEQIH 222


>gi|149632137|ref|XP_001505810.1| PREDICTED: similar to PTPRF interacting protein alpha 2
           [Ornithorhynchus anatinus]
          Length = 1257

 Score = 40.1 bits (92), Expect = 1.00,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEEVAAANQEIVALREQN 223

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++  +     +G    + I          ++  +    D          +++L    +
Sbjct: 224 AHIQRKM--ASGEGSTESEHIDGMEPGQKVHEKRLSNGSIDSTDDTSQVVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKDRLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|198471864|ref|XP_001355753.2| GA19364 [Drosophila pseudoobscura pseudoobscura]
 gi|198139499|gb|EAL32812.2| GA19364 [Drosophila pseudoobscura pseudoobscura]
          Length = 691

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D         +  A PV +      + L+     I       K+  L  L +      + 
Sbjct: 208 DQLGINSPNTSRSASPVLKMSTMRHVQLKCHQQEIRRSYNLDKLLLLQRLQRLQQQKLRH 267

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           ++     + RL        E+ +  +        +   S  + H++ +    +L +QQ I
Sbjct: 268 MTEIGKEIARLSVHCVTRNELRLKPRTTSL----SGDHSHHIHHSMGRTLSVLLAEQQQI 323

Query: 381 EQIVKQHLRY---IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             +   + +         + K  +L   RE  + R       ++ L  R +  L  K+  
Sbjct: 324 APLALYNAQQLTKQIEGLRCKQRLLQAERETCQQRNKKATLRLEALAER-KEALQQKLHR 382

Query: 438 CHTSVSITTRILQSFAYKNTLKR 460
               +      LQ    ++  +R
Sbjct: 383 QRHHLEKERLELQLLQPQHLAQR 405


>gi|118101519|ref|XP_417710.2| PREDICTED: similar to guanylate binding protein [Gallus gallus]
          Length = 1020

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/225 (8%), Positives = 63/225 (28%), Gaps = 7/225 (3%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           N E +  A+A          G E D  L   +  +           AV +      +   
Sbjct: 728 NTEAVAEAVAEYRK------GMEQDLVLPTDSRAVLVDVHRRWERRAVTLFLSHAFADNE 781

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
              +   ++      +     +   +     + L      ++R  +  ++          
Sbjct: 782 RTYQCQLMVKLEAAKEEFCRRNEEASEQQCQKVLRELWQNVERRLQCGDYAAPGGAQLFQ 841

Query: 348 RHFNHIINRIKSDFLIH-NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
               +++ + K             +  L +++ + Q +      + + ++++ A      
Sbjct: 842 DDLGYVLEKYKWWPGKGVKADAVLEVFLREREPLAQALHATDAQLVMMERQREAAAAKEA 901

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
              +  +  L    + L      +    ++     +    R+L+ 
Sbjct: 902 AVREAEVACLKEQQRSLEEHCRQLEQRLLEEQRLRLKEQDRMLEH 946


>gi|109090486|ref|XP_001114185.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 3
            [Macaca mulatta]
          Length = 1205

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 885  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 945  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041


>gi|326428285|gb|EGD73855.1| hypothetical protein PTSG_05550 [Salpingoeca sp. ATCC 50818]
          Length = 534

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 66/213 (30%), Gaps = 7/213 (3%)

Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303
            +A  H           D +A T          +    +     LE      +  L+   
Sbjct: 275 WTATAHAPPRPEHRDDDDRKAATKAEKQRHEQQLASERRQHKRELEQ-----LQHLLSSA 329

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                +  +     ++ L   R ++D+L   L+   E     +     H      ++  I
Sbjct: 330 QQKEEAATRTNKTQERELQRLRGKIDQLQANLKGKAEAANKLEATVTAHNATIRANEETI 389

Query: 364 HNIQKNRQHILEK-QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
             ++   + +  + QQ  +++V++      L K+ +     +L  Q    +  L   I+ 
Sbjct: 390 SRLKGEVKKLNSRMQQQDKKLVEEKEISTRLTKQNESLSAQLLLVQRDTSVTALKRRIEH 449

Query: 423 LITRIEFILSHK-IKSCHTSVSITTRILQSFAY 454
           L   ++       I      +   +  LQ  + 
Sbjct: 450 LRHALQQTQDLLVIAQVKEKIRQASARLQVASP 482


>gi|300818282|ref|ZP_07098493.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1]
 gi|300529173|gb|EFK50235.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1]
          Length = 1047

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|226939763|ref|YP_002794836.1| Chain length determinant protein [Laribacter hongkongensis HLHK9]
 gi|226714689|gb|ACO73827.1| Chain length determinant protein [Laribacter hongkongensis HLHK9]
          Length = 742

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/126 (9%), Positives = 34/126 (26%), Gaps = 4/126 (3%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--NIQKNRQHILEKQQHIEQIVKQ 386
            RL       L   + ++    N  I  ++         + + R+     Q    +  + 
Sbjct: 271 MRLQDNGLQALRNEVTKRTEQLNQSIAGLEDKHPARGPALAEIRELAQRLQARENEFDQH 330

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSVSI 444
                    +  +     L ++ +  +  L         + +  +S   +I   +  +  
Sbjct: 331 VRENYLHRLQATLDQKTRLTQELEQSLAQLEGQAGTFAQQFQQAMSLTRQIAEQNERLKQ 390

Query: 445 TTRILQ 450
               L 
Sbjct: 391 VQDRLD 396


>gi|114319840|ref|YP_741523.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226234|gb|ABI56033.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 1168

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/165 (6%), Positives = 38/165 (23%), Gaps = 6/165 (3%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             ++     +   L+ L    +     R             + +               I
Sbjct: 192 ERLEDVREEVRRQLEKLRRQAEVARRYRELKQAERDTRAELITLRQASLKAQLEEQEAVI 251

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
            +           Q   E++    +  +          +     +     + + +I +  
Sbjct: 252 AAKVNAREFALATQRQAEREIEAIRATQGEAGDRLNAIQADYYGVGSEIARIEQQISHRR 311

Query: 418 THIKKLITRIE------FILSHKIKSCHTSVSITTRILQSFAYKN 456
               K +  +         L   ++     +++    L++   + 
Sbjct: 312 ELRDKQLRELRDSEGEVQALERGLEEDREKLALLEERLEALQPEQ 356


>gi|309794881|ref|ZP_07689302.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7]
 gi|308121534|gb|EFO58796.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|301771444|ref|XP_002921148.1| PREDICTED: dixin-like [Ailuropoda melanoleuca]
          Length = 822

 Score = 39.7 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/238 (9%), Positives = 71/238 (29%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D  ++ D R  +P  + E +   +   Q   
Sbjct: 370 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTSLETSWEEQLLEQQEH 429

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L       ++  + +
Sbjct: 430 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 484

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                  +   +          +  +     QQ + Q     L+      +  +    + 
Sbjct: 485 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 542

Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
            +    + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 543 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQAKLEEALRKLSEASYQQVDLER 599


>gi|17556819|ref|NP_498834.1| hypothetical protein ZC262.3 [Caenorhabditis elegans]
 gi|21903495|sp|P34595|YOD3_CAEEL RecName: Full=Uncharacterized protein ZC262.3; Flags: Precursor
 gi|13559793|gb|AAK29995.1| Hypothetical protein ZC262.3a [Caenorhabditis elegans]
          Length = 773

 Score = 39.7 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 67/241 (27%), Gaps = 19/241 (7%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            DY           +          +   +  L      +  +   + I     L +   
Sbjct: 480 LDYLDWYSYDVFN-SVFWGGLATSLIVCLISFLLNITWILTRKSALWWIQRAERLSRVRK 538

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
             +        +++ L  +    ++I+    ++    +     S        K  Q +  
Sbjct: 539 MVEAMEKYRVRQMESLHEKYTKRVQIVRDNYHQQVEALRVSYASQQEKFQNYKAAQ-VDA 597

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
              H++ +   +   +   ++        L E  + ++  + T    L  R++  +  + 
Sbjct: 598 VHSHLDAMRDGYNNQLGRVREYGSKRAEQLWESYERQVNRMRTF--SLQHRLK--MMRQY 653

Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           K     V+     LQ+ + +         +Q  N   +     +       I   DG  +
Sbjct: 654 KVKQRYVNKLLESLQATSPE---------VQLENEEKVRAALEI-PDDLATI---DGSMD 700

Query: 496 A 496
            
Sbjct: 701 T 701


>gi|297481405|ref|XP_002692090.1| PREDICTED: kinesin family member 16B [Bos taurus]
 gi|296481545|gb|DAA23660.1| kinesin family member 16B [Bos taurus]
          Length = 1339

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 54/161 (33%), Gaps = 6/161 (3%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
            R     +  ++ K   +  + +   +    L   +  ++   +E E   +  I ++   
Sbjct: 643 ERQQREELEKLESKRKLIEEMEEKQKSDKAALERMQQEVETQRQETEMA-QRQIRKQEES 701

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
                + ++S   + ++   ++   E +Q  +Q  +   +    E+  ++       ++ 
Sbjct: 702 LKRRSSHLEST--LKDLLAEKERFEEARQREQQETELQKKKQEEERFLRVQEELQRLQEL 759

Query: 410 KNRIFYLHTHIKKLITRIEFILS---HKIKSCHTSVSITTR 447
            +        I + + R++        K++     +    R
Sbjct: 760 NSHEKAEKVQIFQELERLKREKEEQYAKLEQEKQRLEEQER 800



 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/150 (10%), Positives = 44/150 (29%), Gaps = 3/150 (2%)

Query: 304  INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L   L      LS  + R+  +      +L+  ++           ++      
Sbjct: 948  QCKKRQLQDLLQQHLPRLSEEKQRVREILDRGPLDLDNTLYLVENEMEEKEEQLAQYQAS 1007

Query: 364  HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             +  +  Q   E   ++ +  ++  R      + +        E+   R+   H+ +++ 
Sbjct: 1008 ASQLQKLQATFEFTANVARQEEKVRRKEKEILESREQQQREALERAVARLERRHSALQRR 1067

Query: 424  ITRI---EFILSHKIKSCHTSVSITTRILQ 450
              R    E      ++     +    + L+
Sbjct: 1068 CARAAGGEQAGQEALEKDRERLEHEIQQLK 1097


>gi|239930203|ref|ZP_04687156.1| single-stranded DNA-binding protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291438547|ref|ZP_06577937.1| single-strand DNA-binding protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291341442|gb|EFE68398.1| single-strand DNA-binding protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 190

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|297200911|ref|ZP_06918308.1| single-strand DNA-binding protein [Streptomyces sviceus ATCC 29083]
 gi|197716409|gb|EDY60443.1| single-strand DNA-binding protein [Streptomyces sviceus ATCC 29083]
          Length = 200

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|313499852|gb|ADR61218.1| SbcC [Pseudomonas putida BIRD-1]
          Length = 1214

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 56/199 (28%), Gaps = 9/199 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY---KINTLNSLLKALPNS 317
           DL    P  A +       +   +L    A+    + +       +      L K     
Sbjct: 772 DLAGVLPKEALKALNEDPANAFLALDQQIAQRLQQLEQRKDELEEQQARQAQLDKLRDQQ 831

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
              +   +     L    E   +           H         +   +++ R    +  
Sbjct: 832 QARVQGLQQLQHTLAALDEQRQQAQTSLGELLGEHASAEAWQQHMEATLEQARALNADTA 891

Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFIL 431
           Q ++ +  Q ++     K   ++   L    +Q + +I    +   +L    + R+  + 
Sbjct: 892 QRLQDLRTQGVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMD 951

Query: 432 SHKIKSCHTSVSITTRILQ 450
             ++      +    + ++
Sbjct: 952 DAQVNELRQRLQGAEKAIE 970


>gi|195129944|ref|XP_002009414.1| GI15247 [Drosophila mojavensis]
 gi|193907864|gb|EDW06731.1| GI15247 [Drosophila mojavensis]
          Length = 872

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 93/342 (27%), Gaps = 37/342 (10%)

Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178
             EK     + E  F      P+  +P++++  T     V + I   +       +I F 
Sbjct: 461 KTEKLVLSKISESYFDKILAAPLALLPQMLSCQTLAQSEVEKAIYCLLL------LINFA 514

Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND-EMIVRAIA 237
              +     K  A            R     +  ++A    ++  +  F        A  
Sbjct: 515 SIAKKAYLDKCCALLEQPQLQYALARAMLSGNEQLVA----AMLQIAQFEHFPKAAVAKY 570

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S I    + G  +    ++ A   R  +    +                    L   + 
Sbjct: 571 VSRIG---SSGQGSPTASSEQAEQWRNLSAILKSHRTFMD------------RELAQRVS 615

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            LI     TL           Q +    +R+D L     +  + +     +  N      
Sbjct: 616 TLIDTIGQTLRRNELQSAPVSQVIELYNHRIDSLNCTTHNMQQRLEQASVQLCNSTQQIN 675

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML------REQTKN 411
             +  +   Q     +L  Q+ ++   K         K     +L          + ++ 
Sbjct: 676 VQNAELERFQTKNFELLISQERLQTQCKDLKAQAAQLKTNLSDLLKRWSETSEHLQASER 735

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           R+    + I  L    E  L   + +    +      L++ +
Sbjct: 736 RLSVKQSEIADLQKDCEE-LRRNLAAKSEELV----KLEALS 772


>gi|14591565|ref|NP_143647.1| hypothetical protein PH1812 [Pyrococcus horikoshii OT3]
 gi|74571671|sp|O59476|TIAS_PYRHO RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS;
           Short=tRNA(Ile2)-agm2C synthetase; AltName:
           Full=tRNA(Ile2) agmatidine synthetase
 gi|3258248|dbj|BAA30931.1| 424aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 424

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 16/104 (15%)

Query: 32  LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNKIEFLPEEGIE 85
             +V V+G+++  +      H +F ++D   +I          ++  + K+      G E
Sbjct: 265 YDNVIVKGKVAS-KYWERGRHVFFEIEDETGKIRVAAFEPTKKFRNYVRKLLP----GDE 319

Query: 86  FLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129
            +V G +          I +E   P     L+  +E RK K  +
Sbjct: 320 VIVAGGVK--EHEGVLTINLEKFYPI---KLVPKVEYRKPKCPK 358


>gi|224094146|ref|XP_002192005.1| PREDICTED: protein tyrosine phosphatase, receptor type, f
           polypeptide (PTPRF), interacting protein (liprin), alpha
           2 [Taeniopygia guttata]
          Length = 1199

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/351 (9%), Positives = 98/351 (27%), Gaps = 19/351 (5%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 205

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++  +     +G    + I          ++  +    D    A     +++L    +
Sbjct: 206 AHIQRKM--AAGEGSAESEHIEGMEPGQKVHEKRLSNGSIDSNDEASQVVELQELLEKQN 263

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             + +               E    L+    ++     T   E+    + + +      E
Sbjct: 264 YEMAQMK-------------ERLAALSSRVGEVEQEAETTRKELIKTEEMNSKYQRDIRE 310

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           A      +      +       +    S   ++            +   LE    +    
Sbjct: 311 AMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQLEDKNRQLQER 370

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408
                 +++    +   +   +   E  Q I  + K   R+  +E++ +     +  + Q
Sbjct: 371 LELAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 428

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
              R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 429 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479


>gi|254456582|ref|ZP_05070011.1| ATP-dependent DNA helicase RecG [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083584|gb|EDZ61010.1| ATP-dependent DNA helicase RecG [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 683

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103
           KD    ID I +      ++ +   G E  V GKI  F   ++YQ+
Sbjct: 89  KDETGEIDCIFFNSYEGYVKKILPIGKEITVSGKIGYF--RNRYQL 132


>gi|40788907|dbj|BAA13195.2| KIAA0204 protein [Homo sapiens]
          Length = 1164

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 896  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 955

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 956  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1012

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1013 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1052


>gi|241171657|ref|XP_002410681.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215494918|gb|EEC04559.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 514

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/208 (10%), Positives = 61/208 (29%), Gaps = 15/208 (7%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D  +   + TP       V          +   ++      +    ++      L+  
Sbjct: 290 LLDSGSCSSSKTPEEKMPSQVFSHLAEMKQCLEQASQRQLQHSKQKLRELQHEQEELQRQ 349

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-------FNHIINRIKSDFLIHN-- 365
            + +   +  R   DR+ ++     E    R              +  +++   L     
Sbjct: 350 RHMEMERAYRRQLEDRIRQKEALFAERKRQRSAEKESVLRKSAEELEEKLEQVRLNQREM 409

Query: 366 ---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
              +   R+ + + Q+      +Q  +     KK       +LR+    R  +     + 
Sbjct: 410 DSALDMWRERVADYQEAANLRARQRAQEALEFKKRIAQHERLLRQAEHQRNMHRVEMEES 469

Query: 423 LITRIEFILSHKIKSC-HTSVSITTRIL 449
           +  R++ ++    +    + +    + L
Sbjct: 470 I--RLQSMMERLREKEDKSRLHAQEKQL 495



 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/177 (9%), Positives = 52/177 (29%), Gaps = 15/177 (8%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E   + +   L + K     +  + L +S Q L   ++  + L R+    +E    R+  
Sbjct: 304 EKMPSQVFSHLAEMKQCLEQASQRQLQHSKQKLRELQHEQEELQRQRHMEMERAYRRQLE 363

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE------QIVKQHLRYIFLEKKEKIA-- 400
                   + ++       +    + +  + +E      ++ ++ +       +E++A  
Sbjct: 364 DRIRQKEALFAERKRQRSAEKESVLRKSAEELEEKLEQVRLNQREMDSALDMWRERVADY 423

Query: 401 --ILHMLREQTKNRIFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRILQ 450
               ++   Q           I +    +        +          +      L+
Sbjct: 424 QEAANLRARQRAQEALEFKKRIAQHERLLRQAEHQRNMHRVEMEESIRLQSMMERLR 480


>gi|114632693|ref|XP_001137318.1| PREDICTED: STE20-like kinase isoform 4 [Pan troglodytes]
          Length = 1205

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 885  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 945  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041


>gi|1944185|dbj|BAA19655.1| hSLK [Homo sapiens]
 gi|55664644|emb|CAH70403.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens]
 gi|55957392|emb|CAI12396.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens]
 gi|84105520|gb|AAI11566.1| SLK protein [Homo sapiens]
 gi|119570001|gb|EAW49616.1| STE20-like kinase (yeast), isoform CRA_b [Homo sapiens]
 gi|119570002|gb|EAW49617.1| STE20-like kinase (yeast), isoform CRA_b [Homo sapiens]
          Length = 1204

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 884  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 943

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 944  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1000

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1001 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1040


>gi|296193658|ref|XP_002744585.1| PREDICTED: serine/threonine-protein kinase 10 isoform 3 [Callithrix
           jacchus]
          Length = 860

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +         L       +  + ++++   + L+K            R+ L R   
Sbjct: 613 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 670

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 671 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 730

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  V   T+ 
Sbjct: 731 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 790

Query: 449 LQSFA 453
           L++  
Sbjct: 791 LKALD 795


>gi|291389958|ref|XP_002711489.1| PREDICTED: cytoskeleton-associated protein 4, partial [Oryctolagus
           cuniculus]
          Length = 584

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/164 (7%), Positives = 45/164 (27%), Gaps = 18/164 (10%)

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L   +        +    L+ +  +  +    + +       +  +++  Q +    +  
Sbjct: 312 LKQEQQAFKEAADKERLALQALTEKLLQSEESVSH---LPDEVRRLEEELQQLKADARRP 368

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
           E+             +EK   L    +  ++ +  +          +E +LS K +    
Sbjct: 369 EEDGGFRSSGALEALQEKSQGLDSRLQTVEDGVHAVQVAAAHQTESLESLLS-KSQEHEQ 427

Query: 441 SVSITTRILQSF--AYKNTLKRGYTSIQDTNN--NFITQKRNLA 480
            +    + L+    + +           D +   + +       
Sbjct: 428 RLGALQQRLEGLGASPEA----------DKDGLASTVRSLGEAQ 461


>gi|311273921|ref|XP_003134102.1| PREDICTED: serine/threonine-protein kinase 10-like [Sus scrofa]
          Length = 434

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +  + ++ +   + L+K            R+ L R   
Sbjct: 187 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 244

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 245 KEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 304

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  + +  +   + + CH  V   T+ 
Sbjct: 305 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMVAQCESNMSELQQLQNEKCHLLVEHETQK 364

Query: 449 LQSFA 453
           L++  
Sbjct: 365 LKALD 369


>gi|297687338|ref|XP_002821173.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 2
            [Pongo abelii]
          Length = 1205

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 885  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 945  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041


>gi|159027567|emb|CAO86939.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 426

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNNKR 519
           G+  I + +   IT    +    ++ +   DG+  +  V+   P  +    + +  N   
Sbjct: 146 GF-IISN-DGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVETSNLPT 203

Query: 520 EKQGTQGEL 528
            K G    L
Sbjct: 204 VKLGNSDSL 212


>gi|331651325|ref|ZP_08352350.1| exonuclease SbcC [Escherichia coli M718]
 gi|331051066|gb|EGI23118.1| exonuclease SbcC [Escherichia coli M718]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|170767737|ref|ZP_02902190.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627]
 gi|170123225|gb|EDS92156.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 46/162 (28%), Gaps = 14/162 (8%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +R R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQKETRRRQQTLQQALAEEEKAQPQLAALRLALPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIV------KQHLRYIFLEKKEKIAILHMLREQTKNR 412
                  +   RQ I E    ++  +      + H   +  E + +   L+   ++  +R
Sbjct: 299 IAEHSAALTHTRQQIEEVNTRLQSTMALRANIRHHATRLSAEIQHRQQTLNAWLQE-NDR 357

Query: 413 IFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
               +  +     +     S +  ++     ++   + L + 
Sbjct: 358 FRLWNNELTGWRAQFSQQASDRAHLRQWQQQLNHAGQKLNAL 399


>gi|309791512|ref|ZP_07686014.1| hypothetical protein OSCT_1965 [Oscillochloris trichoides DG6]
 gi|308226437|gb|EFO80163.1| hypothetical protein OSCT_1965 [Oscillochloris trichoides DG6]
          Length = 578

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 57/194 (29%), Gaps = 9/194 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           T    +  P      +  ++    L   +   ++      +     +  +D        R
Sbjct: 73  TLGVALLRPQPPRRVAQRLDQILDLRERLATAVELHQQQADDPTSRMQQADAHSVAQTLR 132

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD--------FLIHNIQKNRQHILEKQQH 379
             ++P  L+    +  F        ++                   +Q+  Q + + ++ 
Sbjct: 133 PAQIPWRLDRPWFLGGFLPLALATTLLFLPNPQDAVLAERQATQAALQQVEQQLAQLEEQ 192

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           I Q  +         ++E  A+   L +   +R       +     R++  L     +  
Sbjct: 193 IAQNSELSQADRERLEQELQALREALAQNPGDR-EEALAELSASEARLQQELDPNADAQR 251

Query: 440 TSVSITTRILQSFA 453
            ++    R L++ +
Sbjct: 252 AALEQMARNLETLS 265


>gi|312200938|ref|YP_004020999.1| single-strand binding protein [Frankia sp. EuI1c]
 gi|311232274|gb|ADP85129.1| single-strand binding protein [Frankia sp. EuI1c]
          Length = 196

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109
           KD  +  +   IW+     +    ++G   +V G++   TF        +  ++ ++ + 
Sbjct: 48  KDGEALFLRCSIWRQAAEHVAESLQKGARVIVQGRLKQRTFETREGEKRTVIELDVDEIG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|159491050|ref|XP_001703486.1| centriole proteome protein [Chlamydomonas reinhardtii]
 gi|158280410|gb|EDP06168.1| centriole proteome protein [Chlamydomonas reinhardtii]
          Length = 3124

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 11/212 (5%)

Query: 250  ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
            E   T+A             A            S +    A L +               
Sbjct: 1678 EARVTIASQYCAFPVSVEQAANASISTSASTSTSGIGAAMAWLRHHSDTATASVRPKGWE 1737

Query: 310  LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             L       + L   R R  +       +L  ++ + +     + +  +        QK 
Sbjct: 1738 QLPGRAPPGRGLVKHRGRGSQRRPPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQ 1797

Query: 370  R--------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                     Q   ++Q+  +Q  K  L+    E + K+  L   +++ K         ++
Sbjct: 1798 EVWAKMQQLQDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLE 1857

Query: 422  KLITRIEFILSHK---IKSCHTSVSITTRILQ 450
                R +     +   ++          + L+
Sbjct: 1858 DEQQRQKDEQQRQKDELQRQKQEAEAKMQQLE 1889



 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/149 (8%), Positives = 40/149 (26%), Gaps = 1/149 (0%)

Query: 293  NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
              ++    +                DQ  S      D   R+ +           +    
Sbjct: 1747 RGLVKHRGRGSQRRPPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQEVWAKMQQL 1806

Query: 353  IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
               + +        +   Q   ++ +   Q ++   +    E + K+  L   +++ K+ 
Sbjct: 1807 QDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLEDEQQRQKDE 1866

Query: 413  IFYLHTHIKKLITRIEFILSHKIKSCHTS 441
                   +++     E  +  +++     
Sbjct: 1867 QQRQKDELQRQKQEAEAKMQ-QLEDEQQR 1894


>gi|332027402|gb|EGI67485.1| Nesprin-1 [Acromyrmex echinatior]
          Length = 11559

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 14/187 (7%)

Query: 278   KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330
              E   + + +  +         +    N      K LP     +   R   DR       
Sbjct: 10317 WEEYLTHVQDFLSSGMPGDYNSLSEHRNLCEVHRKLLPEQQNLILTVRQEEDRNRSVTEQ 10376

Query: 331   ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
                L       L  I+ R     + I    +       +    + +  ++Q +  +   H
Sbjct: 10377 FNALTNLHNETLARILERHATVRDRISAWDRYKLDQRKLLTWLKEVERERQRM-NLQFIH 10435

Query: 388   LRYIFLEKKEKIAILHMLR---EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
             LR +    +   A+L  +     Q ++        +      +   +  +  +    ++ 
Sbjct: 10436 LRRLEKILQRIQALLDKMPVGETQIESLQEQQEYLLTNCDEALAVSIRMEHAANVQRIAN 10495

Query: 445   TTRILQS 451
                 L++
Sbjct: 10496 LRAGLET 10502


>gi|290959031|ref|YP_003490213.1| single-strand DNA-binding protein [Streptomyces scabiei 87.22]
 gi|260648557|emb|CBG71668.1| putative single-strand DNA-binding protein [Streptomyces scabiei
           87.22]
          Length = 185

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|242024665|ref|XP_002432747.1| Liprin-alpha, putative [Pediculus humanus corporis]
 gi|212518232|gb|EEB20009.1| Liprin-alpha, putative [Pediculus humanus corporis]
          Length = 1207

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/234 (8%), Positives = 62/234 (26%), Gaps = 10/234 (4%)

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
              D+   N+        ++ I        E    ++D    L               K 
Sbjct: 260 PDSDVTKVNELQSTIEKQSTEISSWQRRVAELTSRISDLEETLAKTQKELLKSQDSCSKL 319

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
                    +       I  ++ +         +L + ++ L       +   +  E  +
Sbjct: 320 QRDLRENAAQKEDQEERISTLEKRYLNAQRESTSLHDLNEKLEQELQHKEAQMKLQEDKI 379

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
             I  +       +   +K   +   +++  + + + Q+       +  R     +++  
Sbjct: 380 RAIQEKLELSEQKLEQFLKLPDMEEELKQRMEALTQAQERHGSAEDRIQRLEAQLEEKNA 439

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSF 452
            +L         R+       ++  TR+   +   +   +  +       + + 
Sbjct: 440 ELL---------RLNQRLKMNEEHNTRLGATVDKLLSESNDRLQVHLQERMHAL 484


>gi|108808691|ref|YP_652607.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua]
 gi|167399182|ref|ZP_02304706.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|108780604|gb|ABG14662.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua]
 gi|167051686|gb|EDR63094.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 1080

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
            I+          + L  ++Q L  +  RL +L           +   ++H+   +    
Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
             F    +Q+ +    E+Q H +  +   L+        +     +   + + +  YL  
Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491

Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  L  +       +  +         + L + +   
Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529


>gi|300903341|ref|ZP_07121269.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1]
 gi|301301542|ref|ZP_07207677.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1]
 gi|300404636|gb|EFJ88174.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1]
 gi|300843039|gb|EFK70799.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1]
 gi|315256219|gb|EFU36187.1| nuclease sbcCD, subunit C [Escherichia coli MS 85-1]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|56418854|ref|YP_146172.1| hypothetical protein GK0319 [Geobacillus kaustophilus HTA426]
 gi|56378696|dbj|BAD74604.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 1373

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 53/164 (32%), Gaps = 12/164 (7%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R +   I  ++   + L   ++     +   D+     E+ +        +         
Sbjct: 229 RHLSDTIENMDQAKQQLEQLERDERALKRLCDQYRLYNEYMIAEKATEYVKAVKQAEQLA 288

Query: 358 KSDFLIHNIQKN-RQHILEKQQHIEQIVKQHLRYIFL----------EKKEKIAILHMLR 406
            +   +H+ ++  R+ + E  + I ++ ++                 ++ EK   L   R
Sbjct: 289 AAQHRLHDEEEQARKTLDELDESITRLRREEDVLRSREIDLAGHEVFQQAEKYEQLKSER 348

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           E+ + R       I +   R+E     ++      +    R L+
Sbjct: 349 ERLQERWERHEQTIAE-KERLERQHRRRLDESEARLDDLERKLE 391


>gi|332022213|gb|EGI62528.1| STE20-like serine/threonine-protein kinase [Acromyrmex echinatior]
          Length = 1701

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 55/199 (27%), Gaps = 11/199 (5%)

Query: 262  LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQ 319
            +   T +          +     +   +      +++ ++ K     S          ++
Sbjct: 1165 MMTTTTSRVIYGDDENGKVYDDQIFRKQELRELKMLQKMEQKQYQDLSQKAQFNKDQQEK 1224

Query: 320  TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
                 R  L+R        L     ++                     +  + + + ++ 
Sbjct: 1225 RFEQERQILERSAEADLEALARQQRQQIERAEAQQEVDLRVSSKKIRSEQERELKQFREG 1284

Query: 380  IEQIVKQHLRYIFLEKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFI 430
            ++Q ++   + I L  K+K      +R         E+ K  +  L+   +  + R+   
Sbjct: 1285 LKQELRLLKQEIDLMPKDKRKSTFKIRKEKLEAEHEEREKLFLEKLNESHEMSLRRLSDS 1344

Query: 431  LSHKIKSCHTSVSITTRIL 449
               KI           + L
Sbjct: 1345 HREKIALMERQFLQQKQQL 1363


>gi|170288489|ref|YP_001738727.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2]
 gi|170175992|gb|ACB09044.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2]
          Length = 344

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            +L+D    + A+ W       +   +EG    V G++  F      QI +++
Sbjct: 60  MTLEDRTGTVRAVDW-YNAELNDQRLKEGNVVRVKGRVVFFENR--IQINVDN 109


>gi|168008264|ref|XP_001756827.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692065|gb|EDQ78424.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 766

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           + +  ++      + KK +     +       R     T + K        +  +++   
Sbjct: 127 LLKKSERRKDRSNIPKKVQAPKAPVRTTPPTMRTVQPSTSLSKKADMEMEEIIRRMRDLQ 186

Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFFDGQANAIV 498
             ++           KN LK+GY  I   +    +  + +L     +  NF  G   A+V
Sbjct: 187 IKLAKLEENTSINNSKNVLKQGYGIICWKDGKIGLKNREDL-----LQTNFDKGGMRALV 241

Query: 499 INKAPPKEQPTKKCQLHNNKREKQ 522
            +     E   ++   +  + + +
Sbjct: 242 QDYLKEHETVARESASYGARVDDE 265


>gi|157870327|ref|XP_001683714.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68126780|emb|CAJ05311.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 866

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/183 (8%), Positives = 51/183 (27%), Gaps = 10/183 (5%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
               +       + R  +        L   L  +   L   + + +   RE       ++
Sbjct: 21  QQARMSEETCAELRRRCQGLETEKQGLRLELQEAQVRLQARQTQTEEQRREAAEAKLTVL 80

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--QHLRYIFLEKKEKIAI 401
                         ++   +  +    +    + Q ++  +   QH + + +++   +  
Sbjct: 81  SLTAERDELAAKVQEAWDRVAELSAELRRQETEMQRLQTGITAAQHSKELAMQQHSHVEQ 140

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK-- 459
              + ++                 R+   L   ++     +S       ++ Y+ +L   
Sbjct: 141 QLRILQEQLRAHETDKHASAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLACE 195

Query: 460 -RG 461
            RG
Sbjct: 196 SRG 198


>gi|293418463|ref|ZP_06660898.1| exonuclease subunit SbcC [Escherichia coli B088]
 gi|291324991|gb|EFE64406.1| exonuclease subunit SbcC [Escherichia coli B088]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/161 (8%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L + D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTHLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +            +   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|47214811|emb|CAF89638.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 541

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            A  +  +  G A +         S  +       +   RL   +       +     + 
Sbjct: 75  CAHPQPQSSPGGALVESVDDAEGLSVAVERCPLCGSSRRRLTCARCVQAGDFVYFSGRNS 134

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
           +       RL +L  E E   + ++ +  R       + K+      +Q+ +  +   + 
Sbjct: 135 ERYKEKMERLKKLKEEKEQLQQRVVQKMSRRLQADQTKWKTMACRRTVQQLKDSVCGCRS 194

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            +    +  LR      ++++       +    RI      +  L           ++  
Sbjct: 195 QLRSDSELLLRSQEE--RQRLQRRAGRHQDKLERIERHRRRLGDL-----------LERR 241

Query: 439 HTSVSITTRILQSF 452
              +      L + 
Sbjct: 242 GRELEARLAQLAAL 255


>gi|241758637|ref|ZP_04756751.1| chromosome segregation protein SMC [Neisseria flavescens SK114]
 gi|241321148|gb|EER57344.1| chromosome segregation protein SMC [Neisseria flavescens SK114]
          Length = 1161

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|194226617|ref|XP_001914960.1| PREDICTED: protein tyrosine phosphatase, receptor type, f
           polypeptide (PTPRF), interacting protein (liprin), alpha
           2 [Equus caballus]
          Length = 1257

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLGKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|167767440|ref|ZP_02439493.1| hypothetical protein CLOSS21_01959 [Clostridium sp. SS2/1]
 gi|317498565|ref|ZP_07956858.1| HD domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710732|gb|EDS21311.1| hypothetical protein CLOSS21_01959 [Clostridium sp. SS2/1]
 gi|291558725|emb|CBL37525.1| uncharacterized domain HDIG [butyrate-producing bacterium SSC/2]
 gi|316894052|gb|EFV16241.1| HD domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 313

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114
            +L+D    ID  +W+ T     F  E     LV G++T++      Q+ I+ +  +  G
Sbjct: 36  LTLQDKTGMIDGKVWELTNAIGHF--EAMDYILVRGQVTSY--QGSNQLNIQQIRKAQEG 91

Query: 115 T 115
            
Sbjct: 92  E 92


>gi|298246203|ref|ZP_06970009.1| SMC domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297553684|gb|EFH87549.1| SMC domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 1048

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 63/204 (30%), Gaps = 5/204 (2%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           +ETD       A+    +     ++   +           E R         + ++    
Sbjct: 658 YETDIQTMRERANQLRDSEPRLQQVNEQLITLNDPRAQLREQRNIVAQAAQFQKEVAEAE 717

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
             L  L      L         L   ++   E+    +  H N++ +  ++  L    + 
Sbjct: 718 QELAELNTQLAALHEQLAVYHELDESIKGQEELRQRSQGAHQNYLKHIEQARALPERERV 777

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            RQ   E +Q  +++ +    YI          L  +R Q ++    LH  I  L  +++
Sbjct: 778 FRQQEQETEQAHQRMREAEQAYIQARATFNEQELDEVRRQRRD----LHGEISSLAEKMQ 833

Query: 429 FILSHKIKSCHTSVSITTRILQSF 452
             +   I      +    + L+  
Sbjct: 834 Q-IQRAINEAEQRIQNAEQQLREL 856


>gi|209862833|ref|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapiens]
 gi|194380694|dbj|BAG58500.1| unnamed protein product [Homo sapiens]
          Length = 746

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S+IP  +A   +       T  D              E 
Sbjct: 317 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 376

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 377 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 434

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 435 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 494

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 495 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 526


>gi|114640309|ref|XP_522179.2| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 437

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/215 (8%), Positives = 59/215 (27%), Gaps = 11/215 (5%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H  + T +  + D R  +P    E +   +   Q   +  E      +I  ++  +   +
Sbjct: 8   HFVEGTDSALSRDWRPGSPGTYLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGS 67

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                               ++L       ++  + +       +   +          +
Sbjct: 68  LPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQ 122

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITR 426
             +     QQ + Q     L+      +  +    +  +    + ++   +  + +    
Sbjct: 123 GIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKE 180

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
           +       ++     +    R L   +Y    L+R
Sbjct: 181 LGQK-DRLLQQHQAKLEEALRKLSDVSYHQVDLER 214


>gi|108804744|ref|YP_644681.1| DNA polymerase III subunit alpha [Rubrobacter xylanophilus DSM 9941]
 gi|108765987|gb|ABG04869.1| DNA polymerase III, alpha subunit [Rubrobacter xylanophilus DSM 9941]
          Length = 1084

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 34   HVCVRGEISGYRGIH-SSGH--AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90
             V V G I   +     SGH   +  ++D    + A +++    +   L   G  FL+ G
Sbjct: 973  RVRVAGLIECLQHPPTRSGHPVWFLLIEDERGLLQATVFRRVYGRYGDLLHHGGAFLLEG 1032

Query: 91   KITTFPGSSKYQIIIESLI 109
            ++   P    +  ++E + 
Sbjct: 1033 RVEQSPRRG-FAFLVERVE 1050


>gi|319637793|ref|ZP_07992559.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102]
 gi|317400948|gb|EFV81603.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102]
          Length = 1161

 Score = 39.7 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|332283756|ref|YP_004415667.1| DNA polymerase III subunit alpha [Pusillimonas sp. T7-7]
 gi|330427709|gb|AEC19043.1| DNA polymerase III subunit alpha [Pusillimonas sp. T7-7]
          Length = 1163

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 28   VESNLSHVCVRGEISGYRGI--HSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85
            +E++ S     G +S  R          Y  L D  ++++  I+     +     +E   
Sbjct: 989  LEASRSLQWFAGVLSSLRPKMTRRGKMLYALLDDGSAQVEVAIFNELYEQHRNRLKEDQL 1048

Query: 86   FLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123
             ++ GK++    S   ++  + +       L  A E R
Sbjct: 1049 VIIHGKVSNDDYSGGLRVSADEIF-----DLQLAREAR 1081


>gi|331681789|ref|ZP_08382422.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299]
 gi|331080991|gb|EGI52156.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|301762800|ref|XP_002916827.1| PREDICTED: liprin-alpha-2-like, partial [Ailuropoda melanoleuca]
          Length = 1225

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 132 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 189

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 190 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 249

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 250 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 308

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 309 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 368

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 369 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 411

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 412 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 465


>gi|194892993|ref|XP_001977785.1| GG18048 [Drosophila erecta]
 gi|190649434|gb|EDV46712.1| GG18048 [Drosophila erecta]
          Length = 1060

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 15/182 (8%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           +  V      +    N E     + +     K     +L     N  Q  +    R+ + 
Sbjct: 679 DRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQA 738

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQH 387
            ++          RK     H           H  Q+ R  + +K+Q ++Q    ++K H
Sbjct: 739 QKQYIELEMRKFKRKRMIMQH----------EHEDQQLRDELEKKEQQLQQAHAMLLKHH 788

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-SCHTSVSITT 446
            +   LE +++ ++  +  EQ   +      + +  + RI+  L  K             
Sbjct: 789 EKTQELEYRQQKSVHQLREEQINKQHDTELHNQEDYMERIKKELERKHAVELRQQPKSLK 848

Query: 447 RI 448
           + 
Sbjct: 849 QK 850


>gi|145526581|ref|XP_001449096.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416673|emb|CAK81699.1| unnamed protein product [Paramecium tetraurelia]
          Length = 573

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 50/162 (30%), Gaps = 1/162 (0%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +        L    + L +    L       ++  +     LE +      
Sbjct: 154 QEKYLEELQQQNHVLRQKLQVKKQKLASLRDQLKQGETVFEQQGQSFGKELERVQQLCEE 213

Query: 349 HFNHI-INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
             N I     ++  L   +++++  +  K   ++ +     +       +++  L    +
Sbjct: 214 FSNEIKNQEQQNRGLEVELEQSKNDLAHKMSRLDILNNYDQQQQIEGLNQQLNYLKSQLD 273

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           Q   +       + K     + +L ++       +S  + +L
Sbjct: 274 QANEKQEVTQVQLAKAEKNQQRLLQNQEVEIEKRLSQQSNLL 315


>gi|296471447|gb|DAA13562.1| CDC42 binding protein kinase gamma (DMPK-like) [Bos taurus]
          Length = 1417

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/245 (11%), Positives = 68/245 (27%), Gaps = 29/245 (11%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-YRHFNHIINRI 357
            ++ +   L+   + L    +    S+ RL+   RE E N E  I        +  ++R 
Sbjct: 634 RLQEENRRLSQEQERLMEELEREQQSKQRLEGERRETESNWEAQIADILSWVNDEKVSRG 693

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
               L   + +  + +               ++     ++  A   +  +     +    
Sbjct: 694 YLQALATKMAEELESLRNVGTQTLPSRPLDHQWKARRLQKMEASARLELQSA---LEAEI 750

Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTL-----KRG---YTSIQDT 468
              + L  R+      ++    + +    +  Q+      TL      RG          
Sbjct: 751 RAKQGLQERLTQAQEAQL-RAESRLQEAEKRHQALQQELATLREELRARGPPD----TKP 805

Query: 469 NNNFI---------TQKRNL-ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518
           +N+ I            +N   +   + +   +G+ +  +    P     T         
Sbjct: 806 SNSLIPFLSFRGSEDSAKNAGTSGEALELR-PEGRRSLRLGAVFPRTPAATTPPAESPPA 864

Query: 519 REKQG 523
           +    
Sbjct: 865 KPGSH 869


>gi|293115446|ref|ZP_05791529.2| HD domain protein [Butyrivibrio crossotus DSM 2876]
 gi|292809736|gb|EFF68941.1| HD domain protein [Butyrivibrio crossotus DSM 2876]
          Length = 322

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105
            +L+D    +D  IW      I    E G   L+ G +T F  +   Q+ +
Sbjct: 42  LTLQDKTGNLDGKIWNPNSPGIRDDFESGDYILLNGDVTVF--NGALQLNV 90


>gi|281348462|gb|EFB24046.1| hypothetical protein PANDA_005977 [Ailuropoda melanoleuca]
          Length = 713

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%)

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +   N    L  S    +       +   +             +     F I   ++
Sbjct: 386 YVNRLQNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 445

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426
            RQ I E +    +I+++  R     ++         ++       +  L     +L  R
Sbjct: 446 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 505

Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           +  +   + +     +    ++L++        +  +T+ R
Sbjct: 506 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 545


>gi|296221156|ref|XP_002756625.1| PREDICTED: STE20-like serine/threonine-protein kinase isoform 2
            [Callithrix jacchus]
          Length = 1206

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 886  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNILKNRKKEEQEFVQKQQQELDGS 945

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 946  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1002

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1003 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1042


>gi|296412224|ref|XP_002835825.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629620|emb|CAZ79982.1| unnamed protein product [Tuber melanosporum]
          Length = 491

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/317 (10%), Positives = 92/317 (29%), Gaps = 23/317 (7%)

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153
           + +  +   G G  +   E  +  +   E  F             N +            
Sbjct: 177 LRLTVVDTPGFGDFVDNDESWRPIVDNIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 236

Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213
           PTG  ++ +   +  R   +V + PV  + D    E      +   +       +  I  
Sbjct: 237 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAEFKK--RILADIDHHKIQIFE 294

Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263
             R     ++    N+E++     A+  ++  + +A G +       W +   D      
Sbjct: 295 GPRYELDDDETIAENNEIMSKVPFAVVGANSEVTNADGRKVRGRRYPWGIIEVDNEEHCD 354

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                         +    ++    E   ++ +  +   +  ++   +      ++  + 
Sbjct: 355 FVKLRQMLIRTHMEELKEHTNNFLYENYRSDKLTAMGVAQDPSVFKEVNPAVKQEEERTL 414

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381
              +L ++  E++   +  +  K          +      +   +Q+ R  + EK+  +E
Sbjct: 415 HEQKLAKMETEMKMVFQQKVAEKESKLRQSEQELYDRHRDMKEQLQRQRSELEEKKSRVE 474

Query: 382 QIVKQHLRYIFLEKKEK 398
                  +        +
Sbjct: 475 SGRPLEEKGKRKGFSLR 491


>gi|291404781|ref|XP_002718768.1| PREDICTED: serine/threonine kinase 2 isoform 2 [Oryctolagus
            cuniculus]
          Length = 1210

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 890  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNILKNRKKEEQEFVQKQQQELDGS 949

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 950  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1006

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1007 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1046


>gi|237809004|ref|YP_002893444.1| recombination and repair protein [Tolumonas auensis DSM 9187]
 gi|237501265|gb|ACQ93858.1| DNA repair protein RecN [Tolumonas auensis DSM 9187]
          Length = 555

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 62/182 (34%), Gaps = 6/182 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +     L + +      +++ +  K+  L  +   L N  Q L  ++ +++    EL 
Sbjct: 226 DSQFCLQLLHDGDDITIGTLMQNVLDKLEQLGEMDPLLKNVAQMLQDAKIQIEESHYELR 285

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L+ +     R         K+  L        + + EK + + Q +++          
Sbjct: 286 SYLDNLDIDPTRFIEVENRLSKTMELARKHHVKPEELAEKHRQLRQELQELGAA-----D 340

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYK 455
           E++  L    +Q ++        +     R    LS +I    + +++    L+     +
Sbjct: 341 ERLQELATALQQARDEYLDAAQKLSASRKRYAAELSQQITEQISQLNMPDGRLEIVFHPQ 400

Query: 456 NT 457
            T
Sbjct: 401 ET 402


>gi|237832319|ref|XP_002365457.1| trichohyalin, putative [Toxoplasma gondii ME49]
 gi|211963121|gb|EEA98316.1| trichohyalin, putative [Toxoplasma gondii ME49]
          Length = 394

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 61/183 (33%), Gaps = 8/183 (4%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
           + +  ++A L   +    + +        + L  + Q +   + +      E    L+  
Sbjct: 179 NRIEGIQANLQKKMQSAEERRNQLRAQEKERLAKALQQIEKVQGKNRLEEEEKSIRLQEK 238

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
           +    +    ++   +S       ++ R+ IL ++  +E+  K     + L  + K  I+
Sbjct: 239 LEEAEKRRKQLLEE-ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKII 297

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYK 455
              +   + +I      + +  T +E  L    +          ++ ++        +  
Sbjct: 298 EETKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPS 357

Query: 456 NTL 458
            TL
Sbjct: 358 ATL 360


>gi|146416659|ref|XP_001484299.1| hypothetical protein PGUG_03680 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 321

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 9/209 (4%)

Query: 247 IGHETDWTLADYAADL-----RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           I  E    + +   D       AP P       +   +  +    +L+      + R I 
Sbjct: 28  INPECYHNICESCVDRIFSLGPAPCPYPKCGKILRKNKFKKQVFDDLKIEKEVDLRRRIS 87

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
              N        L   +  L      ++ L   L + +++    +        ++I    
Sbjct: 88  AIYNKTEDDFDDLKEYNLYLEH----VETLVFNLINGVDVEATEQEIKKYEQDHKIDILE 143

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           +     +    + + Q+ +E++ ++ L+     + E +      ++   +R+   +    
Sbjct: 144 INMRESQKTSDLEKYQEAMERMKQEKLKIQHQMELEDLEYQKQQKQSLLDRLSSSNIDSD 203

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQ 450
           ++I +    ++ ++      +   T  L+
Sbjct: 204 EIIAQNNSRVNKRLSMRKQQLQQITSQLE 232


>gi|324021736|ref|NP_001191231.1| amyloid beta A4 protein isoform i precursor [Homo sapiens]
          Length = 733

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S+IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|41406055|ref|NP_958816.1| amyloid beta A4 protein isoform b precursor [Homo sapiens]
 gi|28721|emb|CAA30050.1| amyloid A4 protein [Homo sapiens]
 gi|41350939|gb|AAH65529.1| Amyloid beta (A4) precursor protein [Homo sapiens]
 gi|119630363|gb|EAX09958.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer
           disease), isoform CRA_b [Homo sapiens]
 gi|119630368|gb|EAX09963.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer
           disease), isoform CRA_b [Homo sapiens]
 gi|190692067|gb|ACE87808.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer
           disease) protein [synthetic construct]
 gi|254071445|gb|ACT64482.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer
           disease) protein [synthetic construct]
 gi|225936|prf||1403400A amyloid protein A4
          Length = 751

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S+IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|331656449|ref|ZP_08357411.1| exonuclease SbcC [Escherichia coli TA206]
 gi|331054697|gb|EGI26706.1| exonuclease SbcC [Escherichia coli TA206]
          Length = 1047

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+       R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|291387405|ref|XP_002710280.1| PREDICTED: kinesin family member 20A [Oryctolagus cuniculus]
          Length = 890

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 48/167 (28%), Gaps = 9/167 (5%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            ++E   +  +    +            L    + L       D +  E+   ++     
Sbjct: 546 DDIENEADISVYGKEELLQVVEAMKALLLKERQEKLQLEMQLRDEICNEMVEQMQQREQW 605

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
              H +     ++        +   + +   ++ +    ++ ++      +E  A+L   
Sbjct: 606 CSEHLDTQKELLE--------EMYEEKLKILKESLTSFYQEEIQERDERIEELEALLQEA 657

Query: 406 REQTKNRIFYLHTHIKKLITRI-EFILSHKIKSCHTSVSITTRILQS 451
           R+Q             +   R+     + +++   T +      L S
Sbjct: 658 RQQPVANQQSGSELSLRRSQRLAASASTQQLQEVKTKLEQCKAELHS 704


>gi|224087547|ref|XP_002192527.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 18
           [Taeniopygia guttata]
          Length = 1010

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
               + A E +             ++  + + +++ I+  +  L SL   +   D  +  
Sbjct: 605 HDPSSDAEEGSQTSDGTRLDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIEV 664

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
              R     RE +H L+              N  K    + N+QK +  +  +QQ +E+ 
Sbjct: 665 --QRATMADREKQHRLQSTRGNLLLEQEKQRNFEKQREELMNVQKLQSQLKLEQQRLERE 722

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
             +  R   L  + ++        Q + R+      +     R      H ++    +  
Sbjct: 723 RSRQQREFELT-EARLQEHAEEMRQLQERLSQDREEL----ERQREAYQHDLERLREAQR 777

Query: 444 ITTRILQSFAYKNTLKR 460
              +  +       LK+
Sbjct: 778 AVEKERERLDQLRKLKK 794


>gi|327202147|gb|AEA36719.1| single-stranded DNA binding protein [Periwinkle leaf yellowing
          phytoplasma]
          Length = 104

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           GEI+      +      ++KD  + I  +I++   + +     +G +  V G ++ 
Sbjct: 24 EGEITKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75


>gi|301784541|ref|XP_002927685.1| PREDICTED: serine/threonine-protein kinase 10-like [Ailuropoda
           melanoleuca]
          Length = 983

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/185 (8%), Positives = 53/185 (28%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +    ++ +   + L+K            R+ L R   
Sbjct: 736 ICDKERECLTRKQELLRDREAALWETEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 793

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + ++        + +  +   ++ +         +Q  
Sbjct: 794 KEREQMQRYNQRMVEQLKVRQQQERARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 853

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +     +  + +  +   + + CH  V   T+ 
Sbjct: 854 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMTAQCESNMSELQQLQNEKCHLLVEHETQK 913

Query: 449 LQSFA 453
           L++  
Sbjct: 914 LKALD 918


>gi|92112181|ref|YP_572109.1| peptidase M23B [Chromohalobacter salexigens DSM 3043]
 gi|91795271|gb|ABE57410.1| peptidase M23B [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
           +  ++   + + L    + +  ++ RL+      +   +  +            R+    
Sbjct: 29  WAQDSPEEVHRQLEALGENIEQTQARLEGTRDARDEA-QRELREVETRLAETHQRLTG-- 85

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
           L     +  Q + E ++   Q ++   R       +++  L+ L    + ++    +   
Sbjct: 86  LQREQDQLDQEVAELKKR-RQTLEIERRRQREALAKQLNALYRLGPTPQLKLLLNQSDPA 144

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +L  R++  L+H  ++    +    ++     
Sbjct: 145 RL-DRLQQYLNHLNQARQQRLDALAKLEDQLD 175


>gi|222099403|ref|YP_002533971.1| Metal dependent phosphohydrolase [Thermotoga neapolitana DSM 4359]
 gi|221571793|gb|ACM22605.1| Metal dependent phosphohydrolase [Thermotoga neapolitana DSM 4359]
          Length = 340

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            +L+D    + A+ W       +   +EG    V G++  F      QI +E+
Sbjct: 55  MTLEDRTGAVRAVDW-YNAELNDQRLKEGSVVKVKGRVVFFENR--IQINVEN 104


>gi|3892157|emb|CAA10033.1| DYS-1 protein [Caenorhabditis elegans]
          Length = 3674

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/191 (8%), Positives = 57/191 (29%), Gaps = 10/191 (5%)

Query: 260  ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
              L          +  P  +    +   + A  + +   L K             P    
Sbjct: 3381 GYLPIDVAEEGIPLTCPPAKVTNQATEQMNADTSQMTAHLAKLSAEHGGGAEHMEPVQSP 3440

Query: 320  TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
                    ++++ +     ++ ++ R       +   ++          +   I    + 
Sbjct: 3441 L-----QIINQVEQLQRDEMDQMLHRLQFENKQLRKELEW----KRGAASTMEIDRSSKR 3491

Query: 380  IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
             ++  +   R   L  +   +++ +   Q++N +      ++    R+E   S  ++  +
Sbjct: 3492 HQERHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQN 3550

Query: 440  TSVSITTRILQ 450
              + +  + L+
Sbjct: 3551 EQLEMQLQRLK 3561


>gi|194909438|ref|XP_001981946.1| GG11315 [Drosophila erecta]
 gi|190656584|gb|EDV53816.1| GG11315 [Drosophila erecta]
          Length = 1951

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/338 (9%), Positives = 93/338 (27%), Gaps = 26/338 (7%)

Query: 115  TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV 174
             L  A  +    +  + +     +  +  + +II    SP       +LQ+   R  L V
Sbjct: 928  ALSEANFQLGGDISAQDIVDGHREKTLSLLWQIIYKFRSPKFHAAATVLQKWWRRRWLHV 987

Query: 175  I----IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230
            I    I   ++        +  A+ + + +++         +  A    +   +  F   
Sbjct: 988  IIQRRIRHKELMRRHRAATVIQAVFRGHQMRKYVK------LFRAERTQAAIIMQKFTRR 1041

Query: 231  MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290
             + +     S   I  I                        +      E  Q+++     
Sbjct: 1042 YLAQKQLYHSYHSIVTIQ-------------RWWRAQQLGRQYRQRFLELRQAAIFLQRI 1088

Query: 291  RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350
                +  + +     T          +  +    ++R  +L +                 
Sbjct: 1089 WRRRLFAKKLLAAAETARLQRSQKQQAAASYIQVQWRSHQLGKLQRQKFLRQRDLIMFVQ 1148

Query: 351  NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ--IVKQHLRYIFLEKKEKIAILHMLREQ 408
              + ++          Q+ ++  +  QQ       +++        +   + +    R  
Sbjct: 1149 RRMRSKWIMLKQQKEFQQLKRAAINVQQRWRAKLSMRKCNADYLALRSSVLKVQAYRRAT 1208

Query: 409  TKNRIFYLHTH-IKKLITRIEFILSHKIKSCHTSVSIT 445
             + R+   H   ++K + R++  +   +K      +  
Sbjct: 1209 IQMRMDRNHYCSLRKNVIRLQQRMRATMKMREQRQNYL 1246


>gi|158260637|dbj|BAF82496.1| unnamed protein product [Homo sapiens]
          Length = 472

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/203 (8%), Positives = 54/203 (26%), Gaps = 11/203 (5%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D R  +P    E +   +   Q   +  E      +I  ++  +   +            
Sbjct: 55  DWRPGSPGTYLETSWEEQLLEQQEYLEREMEEAKKMISGLQALLLNGSLPEDEQERPLAL 114

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                   ++L       ++  + +       +   +          +  +     QQ +
Sbjct: 115 CEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRL 167

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            Q     L+      +  +    +  +    + ++   +  + +    +       ++  
Sbjct: 168 TQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQH 226

Query: 439 HTSVSITTRILQSFAYKNT-LKR 460
              +    R L   +Y    L+R
Sbjct: 227 QAKLEEALRKLSDVSYHQVDLER 249


>gi|55153744|gb|AAH85224.1| LOC495519 protein [Xenopus laevis]
          Length = 525

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 49/203 (24%), Gaps = 1/203 (0%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           +           A    +       + L        +++ +     +    S+   +   
Sbjct: 93  FCTYCVLSPVPAAKSCLLCEASLCDTHLRGHSKSAEHVLTQPTDSFMERKCSVHNKVLEY 152

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN-IQKNRQHILEK 376
                              H +E++     +    +   ++         ++  Q + E+
Sbjct: 153 YCCEDSVCVSCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLRPKREETERGAQRLQER 212

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++ + +        +    ++    L  L  Q    I      +   +T +   L  K  
Sbjct: 213 RREVAEKAAGETERVTALFRDIREQLEALERQVLRDISRQKEKLSLTLTNLIHQLEIKKD 272

Query: 437 SCHTSVSITTRILQSFAYKNTLK 459
                +     +         L+
Sbjct: 273 ELSRKIRHIEELCNMADPLTVLQ 295


>gi|227530553|ref|ZP_03960602.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus vaginalis ATCC 49540]
 gi|227349559|gb|EEJ39850.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus vaginalis ATCC 49540]
          Length = 1187

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/185 (10%), Positives = 60/185 (32%), Gaps = 20/185 (10%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             +    +  +     +   L S  + +      L     + D    + E  ++    + 
Sbjct: 718 QTQLHQASEQLHSATGQQQVLQSQRQTIERQVFALKFQSGQQDDQHADYEQKVQQNTQQL 777

Query: 347 YRHFNHI-INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                    N+ ++  L   I++ +     + Q + Q+ +     +  E+ +++      
Sbjct: 778 KDAQQQFDANKHRTGELQEQIKQLQSDESAQSQQLHQMEQWI--AVAQERLQQLKSSRHA 835

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSH-----------------KIKSCHTSVSITTRI 448
            +Q KN +     H+++ I R+   +++                 ++ +    +  T   
Sbjct: 836 LQQEKNSLQINADHLEQQIHRLNLQINNDHADDESNETALQDATQQLTTVKQQLVTTKEK 895

Query: 449 LQSFA 453
           L S +
Sbjct: 896 LNSLS 900


>gi|161018581|emb|CAK02139.1| exodeoxyribonuclease VII large subunit (fragment) [Bartonella
           tribocorum CIP 105476]
          Length = 81

 Score = 39.7 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 12/79 (15%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK------ITTFPGSSKYQIIIESL 108
           F+LKD+  +++ +I  G+  KI+          + GK      IT F  SSKYQI IE+L
Sbjct: 9   FALKDDEMQLEGVIVMGSDVKIQISSS------IRGKNDQFRQITIFLRSSKYQIFIEAL 62

Query: 109 IPSGSGTLLTALEKRKKKL 127
             +G G L T   K KK++
Sbjct: 63  EATGVGVLATLFIKSKKEI 81


>gi|215485281|ref|YP_002327712.1| hypothetical protein E2348C_0120 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966245|ref|ZP_07780471.1| uncharacterized protein yacH [Escherichia coli 2362-75]
 gi|215263353|emb|CAS07668.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|312289488|gb|EFR17382.1| uncharacterized protein yacH [Escherichia coli 2362-75]
          Length = 617

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +       ++  P + 
Sbjct: 430 AAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAAREKMQTNPQNQ 489

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370
           Q    +R R+   P E    +   +    +  +       RI+S             + R
Sbjct: 490 QRREAARQRIQSAPPEQRQAVREKMQTNPQNQQRREAARQRIQSASPEQRQVFKEKVQQR 549

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH-THIKKLITRIEF 429
               E++ +  Q V+          +EK+      R    NR   L+      +  R+  
Sbjct: 550 PLNQEQRDNARQRVQSASPEQRPFFREKVQESRPQRLNDSNRTARLNNEQRSTVRERLSE 609

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 610 RGARRLER 617



 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 7/134 (5%), Positives = 30/134 (22%), Gaps = 5/134 (3%)

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
             + R    P            +++    H  +              +Q     +Q  + 
Sbjct: 410 QFQQRTHTAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQRYQS 469

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
              +  +    + +             +          + +  +++    +         
Sbjct: 470 ASPEQRQAAREKMQTNPQNQQRREAARQRIQSAPPEQRQAVREKMQTNPQN-----QQRR 524

Query: 443 SITTRILQSFAYKN 456
               + +QS + + 
Sbjct: 525 EAARQRIQSASPEQ 538


>gi|17506447|ref|NP_492946.1| DYStrophin related family member (dys-1) [Caenorhabditis elegans]
 gi|55584033|sp|Q9TW65|DMD_CAEEL RecName: Full=Dystrophin-1
 gi|14530423|emb|CAB61012.2| C. elegans protein F15D3.1a, confirmed by transcript evidence
            [Caenorhabditis elegans]
 gi|14530444|emb|CAB61005.2| C. elegans protein F15D3.1a, confirmed by transcript evidence
            [Caenorhabditis elegans]
          Length = 3674

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/191 (8%), Positives = 57/191 (29%), Gaps = 10/191 (5%)

Query: 260  ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
              L          +  P  +    +   + A  + +   L K             P    
Sbjct: 3381 GYLPIDVAEEGIPLTCPPAKVTNQATEQMNADTSQMTAHLAKLSAEHGGGAEHMEPVQSP 3440

Query: 320  TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
                    ++++ +     ++ ++ R       +   ++          +   I    + 
Sbjct: 3441 L-----QIINQVEQLQRDEMDQMLHRLQFENKQLRKELEW----KRGAASTMEIDRSSKR 3491

Query: 380  IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
             ++  +   R   L  +   +++ +   Q++N +      ++    R+E   S  ++  +
Sbjct: 3492 HQERHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQN 3550

Query: 440  TSVSITTRILQ 450
              + +  + L+
Sbjct: 3551 EQLEMQLQRLK 3561


>gi|71018319|ref|XP_759390.1| hypothetical protein UM03243.1 [Ustilago maydis 521]
 gi|46099115|gb|EAK84348.1| hypothetical protein UM03243.1 [Ustilago maydis 521]
          Length = 1168

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 5/131 (3%)

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
           R       RE E     ++ R+        +++    L H     RQ I   Q  +  I 
Sbjct: 726 RRIGVDNIREYEERQVRLMQRQSDAKLQYESQLAR--LNHQANFERQQIENTQDRLNNIR 783

Query: 385 KQ--HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
           +     R      + +        +     I  + + + +L T+        ++   T +
Sbjct: 784 EAIARERNKLTSWQAQKQGKQQELDGMLEEISEMQSQLSELQTQ-NEAKKATLEEKRTEL 842

Query: 443 SITTRILQSFA 453
               R+L S +
Sbjct: 843 HKAARLLDSLS 853


>gi|308235863|ref|ZP_07666600.1| Single-strand DNA-binding protein [Gardnerella vaginalis ATCC
           14018]
 gi|311115042|ref|YP_003986263.1| single-strand binding protein [Gardnerella vaginalis ATCC 14019]
 gi|310946536|gb|ADP39240.1| single-strand binding protein [Gardnerella vaginalis ATCC 14019]
          Length = 213

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 8/57 (14%)

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF------PGSSKYQIIIESLIPS 111
            +  + W            +G+  +V G++    +             ++I+ + PS
Sbjct: 54  SLRCVAWGDLAEHCAQTLTKGMRVIVQGRLRANNYVDKNSNEKRYSIDLMIDEIGPS 110


>gi|16550741|dbj|BAB71039.1| unnamed protein product [Homo sapiens]
          Length = 437

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/187 (9%), Positives = 48/187 (25%), Gaps = 14/187 (7%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 29  YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 88

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +  L+++   +      L+   L 
Sbjct: 89  QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRSTQQDTSVLQLKQELLR 148

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
                  LH      + ++   +  + +    +       ++     +    R L   +Y
Sbjct: 149 ANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDVSY 207

Query: 455 KNT-LKR 460
               L+R
Sbjct: 208 HQVDLER 214


>gi|325206603|gb|ADZ02056.1| chromosome segregation protein SMC [Neisseria meningitidis
           M04-240196]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|119617780|gb|EAW97374.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2, isoform CRA_a
           [Homo sapiens]
          Length = 1210

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|15789944|ref|NP_279768.1| hypothetical protein VNG0779C [Halobacterium sp. NRC-1]
 gi|10580354|gb|AAG19248.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
          Length = 604

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 6/113 (5%)

Query: 33  SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
             V + GE+   +     G   F ++D  S I    ++    +     E G    V G  
Sbjct: 120 DTVHIEGEVVQIKQTA--GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDA 177

Query: 93  TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145
                    Q+ +++      G       +    L E+        + +   P
Sbjct: 178 D--DREGTTQLEVDAFEVLSGGDSADVARRLDAALAEQA--DPVDVDALVDWP 226


>gi|197100263|ref|NP_001127346.1| liprin-alpha-2 [Pongo abelii]
 gi|55728290|emb|CAH90890.1| hypothetical protein [Pongo abelii]
          Length = 1186

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 90  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 147

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423


>gi|307152963|ref|YP_003888347.1| hypothetical protein Cyan7822_3117 [Cyanothece sp. PCC 7822]
 gi|306983191|gb|ADN15072.1| hypothetical protein Cyan7822_3117 [Cyanothece sp. PCC 7822]
          Length = 933

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 50/163 (30%), Gaps = 6/163 (3%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
              ++     L+     + +    L   +   D    +LE      I      +   I  
Sbjct: 32  KEQLEQAKQALDEAEADVQDKQSLLRELQQGQDNQKVQLEAIYSEQIRELEAEYQAKIKD 91

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           ++          ++ ++ E +  ++  ++   +    E++           Q++  +  L
Sbjct: 92  LE------QSPVDQPNLEEIKAQLQAEIEASYQTTITERESSYQAKIEEILQSQREVQDL 145

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
                +   ++E     +I+    S     + L+    +  L+
Sbjct: 146 ERLKAEFQEQLEQSYRGQIEEIEQSYQAQIQQLKDLHQEEILQ 188


>gi|255572862|ref|XP_002527363.1| ATP binding protein, putative [Ricinus communis]
 gi|223533282|gb|EEF35035.1| ATP binding protein, putative [Ricinus communis]
          Length = 1031

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 41/180 (22%), Gaps = 6/180 (3%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
               N +   +K +        K L    + L                 L+  I      
Sbjct: 822 QYKVNELENRMKERAQEFEIHSKMLQQKIRELENKLTMERDYSDPRL--LQQKIKVLEEK 879

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
                       L    +     I      +  +   + R +    +       +L+   
Sbjct: 880 LREHEQGECISKLWSAEKLGATPIQTTSSRLGDVDSSNRRSLSASNRSMNQGSLLLKGPD 939

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
             R       I    T   F+L+  +    TS S     L+       L R     ++  
Sbjct: 940 SLREVRRKRDIPSKGTENNFLLATSLLEKKTS-SPQISKLRHLDPSKVLSR---ITRNAK 995


>gi|301784543|ref|XP_002927689.1| PREDICTED: cytoskeleton-associated protein 4-like [Ailuropoda
           melanoleuca]
          Length = 637

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 4/134 (2%)

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L   + +L          L+  +  K      + +R+  +  I  +Q+  +H+  +    
Sbjct: 367 LKQEQQKLKEAANSEHLTLQA-LTEKLLQSEEVTSRLPEE--IRKLQEELRHLETEALRA 423

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
           E+           E +EK   L    +  ++ +  + T   +    +E +L+  ++    
Sbjct: 424 EEDGVYKHSASLAELQEKSQGLDSRLQSVEDGVDAVQTASARHSENLEALLARSVEQ-EQ 482

Query: 441 SVSITTRILQSFAY 454
            ++     +     
Sbjct: 483 RLAALQERVAGLGP 496


>gi|254804429|ref|YP_003082650.1| chromosome segregation protein [Neisseria meningitidis alpha14]
 gi|254667971|emb|CBA04250.1| chromosome segregation protein [Neisseria meningitidis alpha14]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|194765787|ref|XP_001965007.1| GF23109 [Drosophila ananassae]
 gi|190617617|gb|EDV33141.1| GF23109 [Drosophila ananassae]
          Length = 690

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 63/214 (29%), Gaps = 13/214 (6%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
                +  + PV          L+ +   I       K+  L  L +      + ++   
Sbjct: 211 NSPAVSRSSSPVLRMSTMRYAQLKCQHQEIRRSYNLDKVLLLQHLQRLHQQRQKQMAVVT 270

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
             + RL  +     E+ +  +      +H  N       +  +   +Q I     +  Q 
Sbjct: 271 REIARLSVQCVTKNELRLKPRTTSMSGDHAANHHSMGRTLSVLLAEQQLIAPLTLYNAQ- 329

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
              HL       + +  +L   RE  + R       ++ L  +    L  ++      + 
Sbjct: 330 ---HLTRRIETLRSQQRLLQAERETFRQRNERARQRLEDLREQ-REALQKQLHGQRYRLE 385

Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
                L+S A ++  +R      D     I Q  
Sbjct: 386 QERLELRSVAPQHIAQR------DQRRQIIRQVE 413



 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 21/194 (10%)

Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323
                 +    + V    Q  +  L       + R I+   +    L        Q    
Sbjct: 299 HAANHHSMGRTLSVLLAEQQLIAPLTLYNAQHLTRRIETLRSQQRLLQAERETFRQRNER 358

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
           +R RL+ L  E    L+  +  +          ++S    H  Q++++            
Sbjct: 359 ARQRLEDLR-EQREALQKQLHGQRYRLEQERLELRSVAPQHIAQRDQR------------ 405

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                R I  + + +++ L +  ++  N                   +           +
Sbjct: 406 -----RQIIRQVERRMSTLVLELQEIYNVQSEGGQQFSICGIAFPH-MEQYTSESRQ--A 457

Query: 444 ITTRILQSFAYKNT 457
              ++L++ +    
Sbjct: 458 ANAQLLENVSPLAV 471


>gi|186683312|ref|YP_001866508.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
 gi|186465764|gb|ACC81565.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
          Length = 388

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHN 516
           L  G+    D N   +T    ++    + ++F DG+     V+ K    +    +    N
Sbjct: 162 LGSGFVI--DPNGRILTNAHVVSDADTVTVSFSDGRTVEGKVLGKDAVSDVAVVQIPGTN 219

Query: 517 NKREKQGTQGEL 528
               +      L
Sbjct: 220 LPTVEIANSDTL 231


>gi|325133939|gb|EGC56595.1| chromosome segregation protein SMC [Neisseria meningitidis M13399]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|316985405|gb|EFV64353.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76]
 gi|325200767|gb|ADY96222.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|301764443|ref|XP_002917641.1| PREDICTED: dystrobrevin alpha-like [Ailuropoda melanoleuca]
          Length = 743

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%)

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +   N    L  S    +       +   +             +     F I   ++
Sbjct: 412 YVNRLQNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 471

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426
            RQ I E +    +I+++  R     ++         ++       +  L     +L  R
Sbjct: 472 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 531

Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           +  +   + +     +    ++L++        +  +T+ R
Sbjct: 532 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|325674331|ref|ZP_08154020.1| single-strand binding protein [Rhodococcus equi ATCC 33707]
 gi|325555011|gb|EGD24684.1| single-strand binding protein [Rhodococcus equi ATCC 33707]
          Length = 161

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109
           KD  +  +   IW+     +      G   +V G++   ++        +  ++ ++ + 
Sbjct: 48  KDGDALFLRCTIWREAAENVAETLTRGTRVIVSGRLKQRSYETREGEKRTVVELEVDEIG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|119630362|gb|EAX09957.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer
           disease), isoform CRA_a [Homo sapiens]
          Length = 563

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S+IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|73961742|ref|XP_547610.2| PREDICTED: similar to dystrobrevin alpha isoform 1 [Canis
           familiaris]
          Length = 797

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%)

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + +   N    L  S    +       +   +             +     F I   ++
Sbjct: 412 YVNRLRNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 471

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426
            RQ I E +    +I+++  R     ++         ++       +  L     +L  R
Sbjct: 472 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 531

Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           +  +   + +     +    ++L++        +  +T+ R
Sbjct: 532 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|107102640|ref|ZP_01366558.1| hypothetical protein PaerPA_01003704 [Pseudomonas aeruginosa PACS2]
          Length = 459

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
              +  A       +MA   + +                 +  +        + +     
Sbjct: 139 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 198

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    RL  L R+ E  L           + + + +    L   +++  +   E Q
Sbjct: 199 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 256

Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422
           Q + +  +Q  R      ++               +      L  +    +      +  
Sbjct: 257 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 316

Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     L  +++     +      L +   +  L+R
Sbjct: 317 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 356


>gi|83859548|ref|ZP_00953068.1| tetratricopeptide repeat family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851907|gb|EAP89761.1| tetratricopeptide repeat family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 1048

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/236 (11%), Positives = 63/236 (26%), Gaps = 12/236 (5%)

Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRA---PTPTGAAEM 273
           G G+  D               S +            T  D  A        +     E 
Sbjct: 150 GPGAGADPAALKSVETTVGKLASRLYETER----DVRTELDNLAHKEERRRDSAERGLEK 205

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
                E  + +L +    L +++    +   + L+ L     +    +  +     R   
Sbjct: 206 LGQRLEDTEKTLTDETRALRDLVETRDERTQSLLSDLQDTSRSLQSRIISAESATQRAAE 265

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE-----KQQHIEQIVKQHL 388
            L  + E +  R  +  +   N +K + +   I    + + +     + +   QI +   
Sbjct: 266 ALAGSQEKLDARLRQLESLQSNALKEEDVQRRIDALAREVADVIRDTRSECARQIAEVTR 325

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
                  +  +A         + R       I   + R+   +  ++      +  
Sbjct: 326 NADGPRLERALAEAETRLRAAEQRQSDSLQRIGAEVARLARAVDQRLDRSEQRLQR 381


>gi|195049641|ref|XP_001992758.1| GH24042 [Drosophila grimshawi]
 gi|193893599|gb|EDV92465.1| GH24042 [Drosophila grimshawi]
          Length = 503

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/197 (10%), Positives = 54/197 (27%), Gaps = 2/197 (1%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
             +               A+   +  Q   +  E  L +   +L +     +        
Sbjct: 126 MKHLQFENHSKLGEVRAEAMTQLKVAQEHHMLQELELQSDKRQLRRMVRERIEMSDMQHR 185

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
             +   +        L     +++  +   K +     +    +  +    ++  Q I +
Sbjct: 186 QLEAHFNQQLLEQRLLFENESNDMNRLHEEKMKEQRMKLELFFNSQMFEVEERKNQQIKD 245

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN--RIFYLHTHIKKLITRIEFILSH 433
            Q H +        Y        +A++  ++EQ +   R       +    T     L  
Sbjct: 246 LQDHHDLAFNDMKNYYNDITLNNLALIGSMKEQIEQLRRQSDRSDRLAAEATAETRRLKE 305

Query: 434 KIKSCHTSVSITTRILQ 450
            ++   T +    R L+
Sbjct: 306 PLEQAKTQLKELQRKLE 322


>gi|168270852|dbj|BAG10219.1| liprin-alpha-2 [synthetic construct]
          Length = 1247

 Score = 39.4 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|221044188|dbj|BAH13771.1| unnamed protein product [Homo sapiens]
          Length = 1104

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 11  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 68

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 69  QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 128

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 129 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 187

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 188 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 247

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 248 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 290

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 291 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 344


>gi|15598287|ref|NP_251781.1| hypothetical protein PA3091 [Pseudomonas aeruginosa PAO1]
 gi|218890709|ref|YP_002439573.1| hypothetical protein PLES_19691 [Pseudomonas aeruginosa LESB58]
 gi|254236062|ref|ZP_04929385.1| hypothetical protein PACG_02020 [Pseudomonas aeruginosa C3719]
 gi|9949200|gb|AAG06479.1|AE004733_6 hypothetical protein PA3091 [Pseudomonas aeruginosa PAO1]
 gi|126167993|gb|EAZ53504.1| hypothetical protein PACG_02020 [Pseudomonas aeruginosa C3719]
 gi|218770932|emb|CAW26697.1| hypothetical protein PLES_19691 [Pseudomonas aeruginosa LESB58]
          Length = 479

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
              +  A       +MA   + +                 +  +        + +     
Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 218

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    RL  L R+ E  L           + + + +    L   +++  +   E Q
Sbjct: 219 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 276

Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422
           Q + +  +Q  R      ++               +      L  +    +      +  
Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 336

Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     L  +++     +      L +   +  L+R
Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376


>gi|67924353|ref|ZP_00517785.1| hypothetical protein CwatDRAFT_1493 [Crocosphaera watsonii WH 8501]
 gi|67853809|gb|EAM49136.1| hypothetical protein CwatDRAFT_1493 [Crocosphaera watsonii WH 8501]
          Length = 650

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 5/164 (3%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +    +       + L+ L    Q+      +     + +E   + I   +  +   I 
Sbjct: 156 HLETKAQEIEQNYEAQLQHLEQKYQSEIQELQQTLANSQSIEETEQRIRELQGAYQTQIE 215

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           N       +   Q + Q I E +Q I +I + +   I   ++     +  L    +++  
Sbjct: 216 NYQVQVQELQQAQASSQSIEETEQRIREIEQAYQTQIQDLQQSHQQAVADLENAHRHQQD 275

Query: 415 YLHTHIKKLITRIEFILSHKI----KSCHTSVSITTRILQSFAY 454
                 +  I  I+     +I    +S   ++       Q+ + 
Sbjct: 276 EREEANQTQIREIQASYQAQIVELEQSHQENIQALQEQ-QAVSP 318


>gi|117926814|ref|YP_867431.1| hypothetical protein Mmc1_3540 [Magnetococcus sp. MC-1]
 gi|117610570|gb|ABK46025.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 1153

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 60/197 (30%), Gaps = 8/197 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D  A  +   P  +   +   +  L         + +  + + +    N L++L +    
Sbjct: 469 DLTALQQLIIPAQSLLQSHTEQFQLLQKKEAQHQQHSEHLQQRMTQLQNQLHTLQQQGDL 528

Query: 317 SDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
                +   R + D L ++L H+      ++  ++  ++ +        +    + H L+
Sbjct: 529 PTPERIQQLRQQRDTLWQQLLHHWSDTSPQQQHNYAALVQQADQLADARDHHGQQIHALQ 588

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           K Q   Q  +Q L     +            +Q +         ++         +   +
Sbjct: 589 KAQTEVQHQQQLLHNHQQQGHALHQQQQQWWQQWRKLWPTSLHGLEP------QAMQRWL 642

Query: 436 KSCHTSVSITTRILQSF 452
           +   T +      L + 
Sbjct: 643 EQRQTVLQNQCD-LHAL 658


>gi|325568275|ref|ZP_08144642.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158044|gb|EGC70197.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 896

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 7/187 (3%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
            A   A    +   S     E          +          +K      Q L+    + 
Sbjct: 233 QALNEAYQENQQQLSHWGLYEEWQQMAPADTLADPQQ--VQAIKQFYQQYQQLTEEIRKK 290

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
           +    +LE   E   +  Y    H IN +    +      +R+     Q+ +       L
Sbjct: 291 EAELDQLEQGKESDKYFFYLDHEHQINHLLQQQVTMARLADREAAANHQEAVAITELNRL 350

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                  +E   ++     +   R+      +++L  R+      +++     +      
Sbjct: 351 VEKRQWSRESPPLVTASIHEQTTRLLQERVQLEELEKRMM-----RLEEKAQPLQANAAR 405

Query: 449 LQSFAYK 455
           L+    +
Sbjct: 406 LEQQHPQ 412


>gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253]
 gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253]
          Length = 1255

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/177 (5%), Positives = 47/177 (26%), Gaps = 3/177 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
             ++   +         +  +    +        L +            + R D L R  
Sbjct: 144 QERKENLTEWGKQLQTRSEQLNESKEELQQRGEQLKERGEELQARGEKLQQRSDELNRSK 203

Query: 336 EHNLEI--IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +   +    +  + +        ++      N  K +     ++   +       +    
Sbjct: 204 QDLQQRGEELKEEGQELKQRGQTLQQRSDELNESKAQLQAKGQELQAQAKQLNESKAQLR 263

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            + E++        +++  +     +++     +      ++ + + S+      ++
Sbjct: 264 NQSEELKQRAQELNESRAELEQRQANLEVRAQELNQT-QRELAARNESLQERRATIE 319


>gi|123428225|ref|XP_001307426.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121889054|gb|EAX94496.1| hypothetical protein TVAG_241820 [Trichomonas vaginalis G3]
          Length = 605

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 60/179 (33%), Gaps = 5/179 (2%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
              E+    +E  Q++   ++ +    I  L + +       +K     D+ L   R + 
Sbjct: 114 KLLEIKRKQEEEFQANQRMIQEKKEKQIKALAEAERQRQLRAIKQREALDRQLEEDRQKA 173

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
                +    ++  ++ + +    +    + +    N Q+ R     K Q   +  ++  
Sbjct: 174 LE---KQREQVKRELYLEQKRKEQLQQIKERNAAAFNAQRQRFEASLKAQQ--EQFEKKC 228

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
           + +  + +E +  +   ++  + R        + L++R         ++    +    +
Sbjct: 229 KNLERKDQESVQRVEKTKQALQERSAQSRARSQMLVSRHLAAKERVQEARSQRIEKLAK 287


>gi|157868186|ref|XP_001682646.1| kinesin [Leishmania major strain Friedlin]
 gi|68126101|emb|CAJ07154.1| putative kinesin [Leishmania major strain Friedlin]
          Length = 1034

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 60/197 (30%), Gaps = 6/197 (3%)

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ +   D           + +   E        L  R + +      ++        + 
Sbjct: 664 TIMELVKDKETLLLRACNGILIANSESAAILEKMLSEREDGLRDTKRLHEEELATQAERF 723

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                + L     +  +L       +  +  R  R          S+       K ++  
Sbjct: 724 CERLKEALDKGAVQQQQLLDRHRDAVAQLEGRLQRSHE------ISEMERRRNDKEKEEF 777

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            ++ Q  ++ ++   +      + ++      R ++++ +  L    ++ + R++  ++ 
Sbjct: 778 RQRVQLAQERMRDEYQQEIERLRARLEGDIGDRHKSRDAVRQLQEMHEREMERLKDEMNL 837

Query: 434 KIKSCHTSVSITTRILQ 450
             +S  +  +     L+
Sbjct: 838 LKRSKDSDCARLQNQLE 854


>gi|68533073|dbj|BAE06091.1| PPFIA2 variant protein [Homo sapiens]
          Length = 1258

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 175 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 232

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 233 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 292

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 293 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 351

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 352 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 411

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 412 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 454

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 455 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 508


>gi|327260119|ref|XP_003214883.1| PREDICTED: EF-hand calcium-binding domain-containing protein
           4A-like [Anolis carolinensis]
          Length = 415

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/205 (10%), Positives = 65/205 (31%), Gaps = 10/205 (4%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E  + ++ Y  D++    +    +     +H +      E     I     +      + 
Sbjct: 179 ELIFRISSYLKDVQQEKESMELVLKRREIDHDREIRCLYEEMEQQIKAEREQLLCQVNSF 238

Query: 310 LLKALPNSDQTLSCSRYRLDR--LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
           L   +   +   +C+   L++    R +     +I     +        +    L  + +
Sbjct: 239 LTLWMKAPELKATCTSQLLNQGDKSRIVPALWGLISIEDTQRKQKNQKNLFIYSLQESTK 298

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           + +  +L+K+       K+      L  ++K+ +    +   +  I   +  ++ L   +
Sbjct: 299 QGKSSLLQKELR----NKEQEFEKMLCHQKKLELQLQSQNSMQLEIRVQNERLQILNESL 354

Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452
                 +++     + +    LQ  
Sbjct: 355 LD----QLERSRWELEVAQGQLQHL 375


>gi|224044380|ref|XP_002190873.1| PREDICTED: pleckstrin homology-like domain, family B, member 2
           [Taeniopygia guttata]
          Length = 1253

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/172 (9%), Positives = 56/172 (32%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   +I     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELERNVIGEKTKEKLKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q +   +         +   
Sbjct: 707 QLKRDADILDIESKHFE--DLEFQQLEHESRLDEEKENLTQQLLHEVAEYQRSIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +     ++   ++    ++    +   + +
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSTLS 815


>gi|291222379|ref|XP_002731197.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 1220

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 10/191 (5%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            +     E    SL  L+         +  +    +    + L    +  +  R  L+ L
Sbjct: 718 RLKQENDEIAMQSLAKLKILEQQKTDLISSHHNKIMEYEDQKLTEIGKLKALHRSTLEEL 777

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH----NIQKNRQHILEKQQHIEQIVKQH 387
            ++ +  +  I        + +         +      +  N + +   Q  +E     +
Sbjct: 778 VKDHQLEINRIKRTHESEIDTVRGTHTHTRALQTVIDQVSANAKDLGSLQHKVESQHYSN 837

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIF---YLHTHIKKLITRIEFILS---HKIKSCHTS 441
           L    +E ++K   L +L+++   +          +++LI+R+E  +S    +++     
Sbjct: 838 LDEREIEARQKDEQLKILQQRLSRQQEDNDRERAKLQELISRMESHMSEQAKQLEQERWR 897

Query: 442 VSITTRILQSF 452
           V      L S 
Sbjct: 898 VKQEESKLNSL 908


>gi|221633719|ref|YP_002522945.1| putative chromosome segregation protein [Thermomicrobium roseum DSM
           5159]
 gi|221155554|gb|ACM04681.1| putative chromosome segregation protein [Thermomicrobium roseum DSM
           5159]
          Length = 1187

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/169 (9%), Positives = 44/169 (26%), Gaps = 6/169 (3%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
           +     A       R      + +    ++L +    L     +L +L  E    +  I 
Sbjct: 685 ARQERLAASLEEARRQFLAARDAVERARRSLESVRDQLRTQETKLVQLDHEWVQLVRSIQ 744

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
                      +       +    +  + + E++  +   +          ++ ++A   
Sbjct: 745 RLDDALAREAESIAAVRAALARDDEQARALHEQEDALHAALDD-----LEHQRAQVADAI 799

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
              +        L   I  L  R E   + +       +    + L + 
Sbjct: 800 ARLDTPDPEREQLLEQIATLRER-ERAGARERSQLAQRLGELRQRLAAL 847


>gi|332157642|ref|YP_004422919.1| single-stranded DNA binging protein [Chinaberry witches'-broom
          phytoplasma]
 gi|330717888|gb|AEC45511.1| single-stranded DNA binging protein [Chinaberry witches'-broom
          phytoplasma]
          Length = 104

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
          GEIS      +  H     KD  + I  ++++G  + +     +G +  V G ++ 
Sbjct: 25 GEISKLDFSIAVNH-----KDKVNYIPCVVFRGLADDMFMYLHKGSKVYVEGSLSI 75


>gi|330810113|ref|YP_004354575.1| nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378221|gb|AEA69571.1| Nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 1213

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 8/199 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D           + +   E  Q++L+ L+      + + ++          + L N  Q 
Sbjct: 700 DAWLTQQNSQLNLRISQDEQRQTALLTLQQDAAR-MTQRLREAEAASQQASQHLGNQQQE 758

Query: 321 LSCSRYRLDRLPRELEHNLEI---IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           L+  R RLD         L        R       +    +    +  +++ R  + E+ 
Sbjct: 759 LARDRQRLDEELSHFSALLPADTLQALRSEPAATFLQLDQQIAQRLEQLEQQRDELGEQL 818

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI----KKLITRIEFILSH 433
           Q  + + K+  R     ++ + A L       + +                 + +  L  
Sbjct: 819 QRQQTLEKEQDRQQTRLQQLEAARLQFSALSEQQQACQEKLTRLLGEHTSAEQWQQQLDQ 878

Query: 434 KIKSCHTSVSITTRILQSF 452
           +++    + +   + LQ  
Sbjct: 879 RLEQTRDAEATANQQLQQL 897


>gi|300692789|ref|YP_003753784.1| methylmalonyl-CoA mutase [Ralstonia solanacearum PSI07]
 gi|299079849|emb|CBJ52526.1| METHYLMALONYL-COA MUTASE [Ralstonia solanacearum PSI07]
          Length = 1099

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 100/404 (24%), Gaps = 30/404 (7%)

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIII---ESLIPSGSGTLLTALEKRKKKLLEEGLFS 134
           + PE+G    + G I          + I    +L P  +G    AL +    L    +  
Sbjct: 134 YSPEDGQRMGLAGMIADMVRRCDIDLSIYAPTTLEPVVAGD-RRALAQLITALESGRV-D 191

Query: 135 DQHKNPIPFIPKIIAV----ITSPTGAVIRDILQRISCRFPL------RVIIFPVKVQGD 184
              +  +             +T   GA    +   +  RF L      R+ +  +     
Sbjct: 192 PALRQAVHERAAATHTPVLGVTGTGGAGKSSLTDELIRRFRLDQHDRLRIAVISIDPSRR 251

Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI- 243
           +    +    +++N +       R    +  R  GS       +     RA     I + 
Sbjct: 252 KSGGALLGDRIRMNAINHPHLFVRS---MATREAGSEISDALPDAIAACRAGGFDLIMVE 308

Query: 244 ISAIGHET--DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
            S IG          D +  +  P    A+++           +   +            
Sbjct: 309 TSGIGQGDAAIVPHVDLSLYVMTPEFGAASQLEKIDMLDFADLVAINKFDRKGAQDAWRD 368

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                  +  +     +                +      +  +  +    +  R     
Sbjct: 369 VCKQVQRNREQWHAKPEAMPVFGTQASHFNDDGVTALYHALADQLAKRGLALGERTLPRP 428

Query: 362 LIHNIQKNRQHILEKQQH--IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                  +   +   +     E     H  +   E + ++A      + ++  +      
Sbjct: 429 PGTCSTSHDAIVPPARVRYLAEVADTVHGYHRRAEAQSRLARERQQLQASRRMLEQAGVT 488

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
              L       L  +       +    R L +      L+R Y 
Sbjct: 489 GDALA-----ALDTQAAERDARLGAAERKLLAMWPD--LRRAYA 525


>gi|188585991|ref|YP_001917536.1| chromosome segregation protein SMC [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350678|gb|ACB84948.1| chromosome segregation protein SMC [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 1191

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 53/153 (34%), Gaps = 3/153 (1%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +    +      + + + L N    L       + L       +E+I  R+ +   +  
Sbjct: 340 DLDNKYESLKKEKHQVEEDLHNIKNRLDKMSQENNELENAKASLIEVISHRQRKETEYDN 399

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNR 412
              +   L   + + +  + + Q   E++  +  +    +  K+ ++  L       K R
Sbjct: 400 YYKEQTRLKKELDELKTEVKKLQSRQEELDNKIKQIKEQQITKQSRLDELVTKITSEKQR 459

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
           I  L +  ++L  RI   L+ +++   +     
Sbjct: 460 IDGLESEKQQLTDRIND-LNQRLQGYKSRYEAL 491


>gi|73978155|ref|XP_532638.2| PREDICTED: similar to PTPRF interacting protein alpha 2 [Canis
           familiaris]
          Length = 1177

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 85  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 144

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++  I     +G    + +          ++  +    D          +++L    +
Sbjct: 145 VHIQRKI--ASSEGSTESEHLEGMDPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 202

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 203 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 261

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 262 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 321

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 322 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 364

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 365 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 418


>gi|73954046|ref|XP_546239.2| PREDICTED: similar to Serine/threonine-protein kinase 10
           (Lymphocyte-oriented kinase) [Canis familiaris]
          Length = 967

 Score = 39.4 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 54/185 (29%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +  + ++ +   + L+K            R+ L R   
Sbjct: 720 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELLRKHE 777

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + K+        + +  +   ++ +         +Q  
Sbjct: 778 KEREQMQRYNQRMIEQLKMRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 837

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +   + +  +    +   + + CH  V   T+ 
Sbjct: 838 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMMAQCESNTSELQQLQNEKCHLLVEHETQK 897

Query: 449 LQSFA 453
           L++  
Sbjct: 898 LKALD 902


>gi|332094545|gb|EGI99591.1| exonuclease sbcC [Shigella boydii 5216-82]
          Length = 1047

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|270483756|ref|NP_001069728.2| dystrobrevin alpha [Bos taurus]
 gi|194678038|ref|XP_001788878.1| PREDICTED: dystrobrevin, alpha [Bos taurus]
 gi|297489641|ref|XP_002697725.1| PREDICTED: dystrobrevin, alpha [Bos taurus]
 gi|296473890|gb|DAA16005.1| dystrobrevin, alpha [Bos taurus]
          Length = 743

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|156054052|ref|XP_001592952.1| hypothetical protein SS1G_05874 [Sclerotinia sclerotiorum 1980]
 gi|154703654|gb|EDO03393.1| hypothetical protein SS1G_05874 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 882

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/105 (8%), Positives = 37/105 (35%), Gaps = 11/105 (10%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +++ R       +  +++ ++  R     ++ K     ++ + T++ +       + + +
Sbjct: 648 LEELRLDKDRLLRQADELRQERSRLNSEIQELKNQNAQLIEDHTRDVLSIKAKETQLVRS 707

Query: 426 RIEF----ILSHKIKSCHTSVSI---TTRILQSFAYKNTLKRGYT 463
           R +      +  +++     +           S +      RGY+
Sbjct: 708 RADAETAEAMCAQLRREQNRLKHALSAAERANSHSP----SRGYS 748


>gi|126325691|ref|XP_001362449.1| PREDICTED: similar to synapsin Ia [Monodelphis domestica]
          Length = 1255

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/172 (10%), Positives = 56/172 (32%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 646 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQEIYSEQKTQLDNCPESMREQLQQ 705

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++ + Q + + +         +   
Sbjct: 706 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKEKLTQQLLREVAEYQRNIVTRKEK 763

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +     ++   ++    ++    +   S +
Sbjct: 764 ISALKKQASHIVQQAQREQDHFVKEKNNLML-MLQREKENLCNLEKKYSSLS 814


>gi|254241789|ref|ZP_04935111.1| hypothetical protein PA2G_02502 [Pseudomonas aeruginosa 2192]
 gi|126195167|gb|EAZ59230.1| hypothetical protein PA2G_02502 [Pseudomonas aeruginosa 2192]
          Length = 479

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
              +  A       +MA   + +                 +  +        + +     
Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 218

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    RL  L R+ E  L           + + + +    L   +++  +   E Q
Sbjct: 219 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQAREKAELQ 276

Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422
           Q + +  +Q  R      ++               +      L  +    +      +  
Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 336

Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     L  +++     +      L +   +  L+R
Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376


>gi|12585359|sp|O55098|STK10_MOUSE RecName: Full=Serine/threonine-protein kinase 10; AltName:
           Full=Lymphocyte-oriented kinase
 gi|2723475|dbj|BAA24073.1| LOK [Mus musculus]
          Length = 966

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/207 (6%), Positives = 55/207 (26%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+            
Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGET 815

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHEHQMRDMVAQCESN 875

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + C+  V   T+ L++  
Sbjct: 876 MSELQQLQNEKCYLLVEHETQKLKALD 902



 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802

Query: 440 TSV 442
             +
Sbjct: 803 ARL 805


>gi|167524637|ref|XP_001746654.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774924|gb|EDQ88550.1| predicted protein [Monosiga brevicollis MX1]
          Length = 606

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/158 (9%), Positives = 44/158 (27%), Gaps = 10/158 (6%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
               + + +      + +A+      L+     L  L   +  ++          F    
Sbjct: 237 YYEEVHQLQKQRHEEMKRAMQRLQAQLADKERELADLQAMVGPDVRRKWDDDAMAFVPTA 296

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
             +        +Q+ +  +   +    +  +Q   Y  L ++ +       R   + R+ 
Sbjct: 297 QEL-------RLQELQAEVERLRARAARDHQQRKDYEHLARRHQQREA---RAGAQERLQ 346

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +L    +    R+   + H  +       +    L   
Sbjct: 347 HLVREYEADQKRLRHQMQHLQRQHDAQAKVQEMQLSDL 384


>gi|114588423|ref|XP_001153670.1| PREDICTED: pleckstrin homology-like domain, family B, member 2
           isoform 4 [Pan troglodytes]
          Length = 1155

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/172 (10%), Positives = 57/172 (33%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +     ++   ++    ++    +   S +
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLS 815


>gi|187732182|ref|YP_001879105.1| exonuclease subunit SbcC [Shigella boydii CDC 3083-94]
 gi|187429174|gb|ACD08448.1| nuclease SbcCD, C subunit [Shigella boydii CDC 3083-94]
          Length = 1047

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++ + + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHSEQKLNAL 399


>gi|323184778|gb|EFZ70149.1| exonuclease sbcC [Escherichia coli 1357]
          Length = 1047

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|320181623|gb|EFW56538.1| Exonuclease SbcC [Shigella boydii ATCC 9905]
          Length = 1047

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|326435946|gb|EGD81516.1| hypothetical protein PTSG_02234 [Salpingoeca sp. ATCC 50818]
          Length = 973

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 40/161 (24%), Gaps = 3/161 (1%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           L         +    +        +A     +  +  R R   +                
Sbjct: 745 LIQEQREKQRKRKDKERQQKERQERAAMLLAKATAHDRVRT--VKWYGLRAWMSFHSALK 802

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
           +   H         L     K    +  +    +Q+     R +   +  K     + ++
Sbjct: 803 KQQEHAAGHHHRHLLRQCWDKWASALEARHAQQQQMADSQRREMLKRRLVKCWRAALKQQ 862

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           + + R+     H  K+  R+      + K     +    R+
Sbjct: 863 RERYRVADGRFH-AKVTRRLLARWRERTKQEQQRMLHLERL 902


>gi|237843561|ref|XP_002371078.1| plectin, putative [Toxoplasma gondii ME49]
 gi|211968742|gb|EEB03938.1| plectin, putative [Toxoplasma gondii ME49]
          Length = 3686

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 74/246 (30%), Gaps = 3/246 (1%)

Query: 210  DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
            + +   R   S E       E +   +      +    G + +   A       A     
Sbjct: 2911 EALTSLRAELSREQADRAAHEKLAEELKACKCALARERGEKEEAARAWQEELTLATRRQE 2970

Query: 270  AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC-SRYRL 328
              E  +  K+     L  ++  L   +  L            +A    D  ++   R   
Sbjct: 2971 EQEEEMKNKQAEIDVLNAMQDELQEQLEELRSRCSQLSAKEEEAPRGRDDEMAYMQRQLA 3030

Query: 329  DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
            + +  +     E+   R+         + + + L  ++Q + + + + Q+ +E +     
Sbjct: 3031 ETVEEKGRLASELATVREVYAQQSEEQKKQLEDLALSLQASEREVADLQRRLEAVTLDVE 3090

Query: 389  RYIFLEKKEKIAILHMLREQTKNRIFYLHT--HIKKLITRIEFILSHKIKSCHTSVSITT 446
            R     K E +  L + + +   +           +   R+   +  +++    +     
Sbjct: 3091 RQQQEAKAEHLRALEVKQSECMRKAGEAANASERAEATQRLLEAVQTQLEEKEKARVAVE 3150

Query: 447  RILQSF 452
            R L++ 
Sbjct: 3151 RELEAL 3156


>gi|320544544|ref|NP_001188695.1| Muscle-specific protein 300, isoform G [Drosophila melanogaster]
 gi|318068310|gb|ADV36945.1| Muscle-specific protein 300, isoform G [Drosophila melanogaster]
          Length = 13540

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278   KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                    + +  +         ++ +          L +    LS          +   L
Sbjct: 12290 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 12349

Query: 332   PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                    L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 12350 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 12409

Query: 392   FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 12410 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 12469

Query: 450   QS 451
             ++
Sbjct: 12470 KT 12471


>gi|214010133|ref|NP_001135735.1| disrupted in schizophrenia 1 [Danio rerio]
 gi|166832195|gb|ABY90095.1| disrupted in schizophrenia 1 [Danio rerio]
          Length = 994

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/185 (7%), Positives = 51/185 (27%), Gaps = 6/185 (3%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
              +    S              + I+ ++  +   L+ L    + L       +     
Sbjct: 568 SEDQRSCISQSRAQTRETLLEEKQRIQKEMCDVQRRLRDLQERSRALELQLELQEMQGPV 627

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           L       +    R    ++       +  +   + + + E+++ +   +++    + L 
Sbjct: 628 LRAADSPHLHLTARALEDLLTSEHRQRISVSPPAHIRRLEEQERVLSLSIREAETKVLLN 687

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS------HKIKSCHTSVSITTRI 448
           ++   ++   + E     +      +  +                 +      + +  R 
Sbjct: 688 QRLCFSLRQKVSESETQLLALHEAKLTAVSGNDFSSAKELKAEIRSVYRERDRLELLHRK 747

Query: 449 LQSFA 453
           LQ+ +
Sbjct: 748 LQTLS 752


>gi|195342674|ref|XP_002037925.1| GM18531 [Drosophila sechellia]
 gi|194132775|gb|EDW54343.1| GM18531 [Drosophila sechellia]
          Length = 8290

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7606 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7665

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    + + E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7666 LEQRRDNLQQLAEHWD-SFENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7724

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      +     ++   L      
Sbjct: 7725 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVGQQAKLNDTLRDKEQQ 7784

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7785 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7816


>gi|309379614|emb|CBX21785.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343



 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 40/146 (27%), Gaps = 1/146 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      R+    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVS 443
             +  + RI       +++     + 
Sbjct: 323 AAQAQLQRIHQEQQQIRVQLEENELQ 348


>gi|296191715|ref|XP_002743753.1| PREDICTED: protein SFI1 homolog [Callithrix jacchus]
          Length = 1338

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/175 (8%), Positives = 46/175 (26%), Gaps = 12/175 (6%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           L        +++   +             +   L     R     R        +     
Sbjct: 817 LVQWREIASVQIYYRQQEDHAIWEARKVLARGCLRTWFQRWRDCSRRSAQQRLQLERAAQ 876

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAI 401
            H   ++    + +  H++   R+ +L +Q      Q + Q      R     ++++   
Sbjct: 877 HHHRQLLLEGLARWKTHHLGCVRKRLLHRQSTQLLAQRLSQTCFHQWRQQLAARRQEQQA 936

Query: 402 LHMLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
                       + +++           R +  +    ++    +      R+L+
Sbjct: 937 SVRALWFWAFSLQAKVWATWLAFVLERRRKKARMQQAFQAYQGQLLQEGAMRLLR 991


>gi|145493186|ref|XP_001432589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399702|emb|CAK65192.1| unnamed protein product [Paramecium tetraurelia]
          Length = 431

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 50/161 (31%), Gaps = 1/161 (0%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                   ++     ++ + KI  +   +         +   R    +L    EH     
Sbjct: 227 QQSQEHLEQIKEKQNQIFQMKIKKIKEKIDYFQEKINIIEKKRLTNLQLTYNKEHEHHQQ 286

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
           + +      +I      + L   I K +   L + Q+  ++  +  R       ++  + 
Sbjct: 287 MNQIRARSENIFRNKSLNMLNKQILKEQTFQLVQSQNQLELESKLSRLNQKWLIQQSQVA 346

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
              + +    +  L   I +   R++  + +K++     + 
Sbjct: 347 RADKLKLSY-LQQLELKISQRDQRLKDQIQNKLEIQRRRLK 386


>gi|307320645|ref|ZP_07600058.1| SMC domain protein [Sinorhizobium meliloti AK83]
 gi|306893680|gb|EFN24453.1| SMC domain protein [Sinorhizobium meliloti AK83]
          Length = 1018

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/116 (7%), Positives = 36/116 (31%), Gaps = 3/116 (2%)

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
             ++   +++   +     +      R  + E +   E +            +E+++   
Sbjct: 116 QERWPAISNLHGYLSITHFLGQASTRRFSLREPRAQWEALKGPAGVDRINSLRERVSGQG 175

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
             R+     I      ++K    +       +      +++ +   +S + +  L+
Sbjct: 176 A-RQAFTRAIRDRTLRLEKASEALRSW--RSLIEDRDRLAVLSNSERSLSPQQVLE 228


>gi|195134458|ref|XP_002011654.1| GI11144 [Drosophila mojavensis]
 gi|193906777|gb|EDW05644.1| GI11144 [Drosophila mojavensis]
          Length = 330

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 45/164 (27%), Gaps = 11/164 (6%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
               + +   +           + L    + L   R R D L    +  L   +      
Sbjct: 128 RDRLDPLRERLDPLRERDPLCER-LDPLRERLDPLRERADPLRERADP-LRDRLDPLRER 185

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
            + +  R   D L   +  +           E++    LR      +E++  L    +  
Sbjct: 186 LDPLRERPDPDPLRERLDPDPLR--------ERLDPDPLRERLEPLRERLDPLRERADPL 237

Query: 410 KNRIFYLHTHIKKLITRIE-FILSHKIKSCHTSVSITTRILQSF 452
           ++R   L      L  R++   L  ++      +      L   
Sbjct: 238 RDRADPLRERADPLRERLDPDPLRERLDPLRERLDPLRERLDPL 281


>gi|73955596|ref|XP_859864.1| PREDICTED: similar to LYST-interacting protein LIP8 isoform 2
           [Canis familiaris]
          Length = 658

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            LE +    +            S  + L      L   R    +  R++E     +    
Sbjct: 91  ELEQQRCRSLQEERDEARAGQLSEHRQLETLKLALEEERQAWVQQERQMEGRYGALQEEV 150

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                      + +       + +  +++ +    +      R      + +++++    
Sbjct: 151 QAQLEKEKENTQREAQAAREAQKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARY 210

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ   
Sbjct: 211 ESQRIQMESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLN 259


>gi|28972093|dbj|BAC65500.1| mKIAA0204 protein [Mus musculus]
          Length = 1307

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 987  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 1046

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 1047 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1103

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 1104 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1143


>gi|281338412|gb|EFB13996.1| hypothetical protein PANDA_017489 [Ailuropoda melanoleuca]
          Length = 934

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/185 (8%), Positives = 53/185 (28%), Gaps = 7/185 (3%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +    +    L       +    ++ +   + L+K            R+ L R   
Sbjct: 687 ICDKERECLTRKQELLRDREAALWETEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 744

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388
           +    ++    R          + ++        + +  +   ++ +         +Q  
Sbjct: 745 KEREQMQRYNQRMVEQLKVRQQQERARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 804

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +     ++E+        +Q +     +     +  + +  +   + + CH  V   T+ 
Sbjct: 805 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMTAQCESNMSELQQLQNEKCHLLVEHETQK 864

Query: 449 LQSFA 453
           L++  
Sbjct: 865 LKALD 869


>gi|146184747|ref|XP_001030049.2| hypothetical protein TTHERM_01164060 [Tetrahymena thermophila]
 gi|146142674|gb|EAR82386.2| hypothetical protein TTHERM_01164060 [Tetrahymena thermophila
           SB210]
          Length = 1339

 Score = 39.4 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 10/164 (6%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
             I  +    +   K L    +    +  R   L             R  R        +
Sbjct: 302 EYIAEQKRIKDEKEKELQRLREMQEKANDRQAELDFLRAKRAMEQNERNARDKERREAEL 361

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQI-------VKQHLRYIFLEKKEKIAILHMLREQTK 410
           +       ++  RQ   EK+Q +++         ++ ++    E++ +I +     +Q K
Sbjct: 362 RQKINQELLEARRQQQYEKEQRLQEQAKNDRDEFQRIIQAQKQEREIEIKLQIEREQQIK 421

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKS---CHTSVSITTRILQS 451
                L   I     +I+    ++++        +    ++L+S
Sbjct: 422 KHADELRKQIALNEEKIKQDQRNRLEEGKKIRDQLQQQKKMLES 465


>gi|297263065|ref|XP_001088353.2| PREDICTED: liprin-alpha-2 isoform 1 [Macaca mulatta]
          Length = 1257

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|332839943|ref|XP_003313878.1| PREDICTED: liprin-alpha-2 isoform 1 [Pan troglodytes]
 gi|221042944|dbj|BAH13149.1| unnamed protein product [Homo sapiens]
          Length = 1156

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 90  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 147

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423


>gi|119617782|gb|EAW97376.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2, isoform CRA_c
           [Homo sapiens]
          Length = 1144

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|219520325|gb|AAI43486.1| PPFIA2 protein [Homo sapiens]
          Length = 1251

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|332839945|ref|XP_003313879.1| PREDICTED: liprin-alpha-2 isoform 2 [Pan troglodytes]
 gi|193785259|dbj|BAG54412.1| unnamed protein product [Homo sapiens]
          Length = 1232

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 203

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 204 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 263

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 264 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 322

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 323 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 382

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 383 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 425

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 426 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479


>gi|168702550|ref|ZP_02734827.1| hypothetical protein GobsU_23682 [Gemmata obscuriglobus UQM 2246]
          Length = 1303

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/182 (8%), Positives = 52/182 (28%), Gaps = 1/182 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A   + + Q+     +     +  RL +      +   +              +     +
Sbjct: 706 AAREQRNQQAQRDREQRENQELADRLKELARRQTDLTDRVKELQSALEQARDQKQKEELQ 765

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           +    L     +  R  + +  R++ +     +   R+ + + ++ + Q  +   R    
Sbjct: 766 QQLKKLRDQQQQVLRDTDQLQERLEQEQNRDRLAGAREQVEQSREAVRQASEALERGQLG 825

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +   +        + T+ ++            R     + K+      ++     L+  +
Sbjct: 826 QAVNEGTRAQRQLDATREQLRRETAARFGEEMRDLRQQARKLDDEQQKLTKQLDELKQ-S 884

Query: 454 YK 455
            K
Sbjct: 885 PK 886


>gi|160899599|ref|YP_001565181.1| hypothetical protein Daci_4165 [Delftia acidovorans SPH-1]
 gi|163858598|ref|YP_001632896.1| hypothetical protein Bpet4280 [Bordetella petrii DSM 12804]
 gi|160365183|gb|ABX36796.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
 gi|163262326|emb|CAP44629.1| putative membrane protein [Bordetella petrii]
 gi|327479863|gb|AEA83173.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 213

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 39/168 (23%), Gaps = 22/168 (13%)

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
              +      I       L     I   V   L Y  +  +    +L    ++ + +   
Sbjct: 1   MNTAQAPRRPISAVVLQSLMWLWLISLSVFAALSYQTMNDQADQTLLDSRLQRLEAQAVG 60

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475
           L   I+ +  R     +  +K     +      +++     TL  GY             
Sbjct: 61  LAETIEAIQQRPVVATAADLKDTRERLEARAAQVET-----TLS-GYA-----------A 103

Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523
             +L     +       Q  A             +       K E   
Sbjct: 104 AEDL---QALRAEVE--QIKARPSALRAAAPAQPRSPSRPTAKPEPPP 146


>gi|257467554|ref|NP_001158111.1| STE20-like serine/threonine-protein kinase isoform 2 [Mus musculus]
 gi|4741823|gb|AAD28717.1|AF112855_1 Ste20-related kinase SMAK [Mus musculus]
 gi|124297506|gb|AAI31675.1| Slk protein [Mus musculus]
          Length = 1202

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 882  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 941

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 942  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 998

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L ++       +
Sbjct: 999  FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1038


>gi|29171755|ref|NP_003616.2| liprin-alpha-2 [Homo sapiens]
 gi|114646073|ref|XP_509243.2| PREDICTED: liprin-alpha-2 isoform 3 [Pan troglodytes]
          Length = 1257

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|39930479|ref|NP_219493.1| dixin isoform b [Homo sapiens]
 gi|34190572|gb|AAH33034.1| DIX domain containing 1 [Homo sapiens]
 gi|119587577|gb|EAW67173.1| DIX domain containing 1, isoform CRA_b [Homo sapiens]
 gi|168270686|dbj|BAG10136.1| dixin [synthetic construct]
          Length = 472

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 64  YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 123

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 124 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 181

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 182 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 240

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 241 SYHQVDLER 249


>gi|18860017|ref|NP_572902.1| Ndc80 [Drosophila melanogaster]
 gi|7292901|gb|AAF48292.1| Ndc80 [Drosophila melanogaster]
 gi|16769462|gb|AAL28950.1| LD33040p [Drosophila melanogaster]
          Length = 675

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 48/153 (31%), Gaps = 8/153 (5%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 ++  ++ L    + L   R +      +    L+  + +       +   I + 
Sbjct: 481 NPNQEDISERVQCLELLGKLLQQHRQQN----IDRRQMLDKQVAKVKSDSIELDTEIATM 536

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE----KIAILHMLREQTKNRIFYL 416
                 QK R   +E     ++ ++   R   LE +     ++  L    +Q   ++   
Sbjct: 537 DSQLRAQKQRLTKMEASYRTKRDMQAQHRQQLLEDQYDQTARLDELEKREKQALEKLEAS 596

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + L+T  E      +K+    +    + L
Sbjct: 597 KQRNEDLLTAAEQFQEQDLKARQDRLEKCEQKL 629


>gi|281351979|gb|EFB27563.1| hypothetical protein PANDA_004929 [Ailuropoda melanoleuca]
          Length = 1141

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 63  PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 120

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 121 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 180

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 181 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 239

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 240 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 299

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 300 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 342

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 343 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 396


>gi|24459867|emb|CAD43195.1| disrupted in schizophrenia 1 protein [Danio rerio]
          Length = 963

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/185 (7%), Positives = 51/185 (27%), Gaps = 6/185 (3%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
              +    S              + I+ ++  +   L+ L    + L       +     
Sbjct: 537 SEDQRSCISQSRAQTRETLLEEKQRIQKEMCDVQRRLRDLQERSRALELQLELQEMQGPV 596

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           L       +    R    ++       +  +   + + + E+++ +   +++    + L 
Sbjct: 597 LRAADSPHLHLTARALEDLLTSEHRQRISVSPPAHIRRLEEQERVLSLSIREAETKVLLN 656

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS------HKIKSCHTSVSITTRI 448
           ++   ++   + E     +      +  +                 +      + +  R 
Sbjct: 657 QRLCFSLRQKVSESETQLLALHEAKLTAVSGNDFSSAKELKAEIRSVYRERDRLELLHRK 716

Query: 449 LQSFA 453
           LQ+ +
Sbjct: 717 LQTLS 721


>gi|304388228|ref|ZP_07370348.1| SMC structural maintenance of chromosomes partitioning protein
           [Neisseria meningitidis ATCC 13091]
 gi|304337755|gb|EFM03904.1| SMC structural maintenance of chromosomes partitioning protein
           [Neisseria meningitidis ATCC 13091]
          Length = 1161

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|291383809|ref|XP_002708418.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 1441

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 9/172 (5%)

Query: 280  HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
              +    +L A L   + RL +     L S  +      + L   +   +R  ++LE  L
Sbjct: 857  EERKQRADLLAHLTGELERLRRAHERELESTRQEQDKQREDLWRRQREQERKLQDLEVEL 916

Query: 340  EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
            EI               +         +K +   +++Q  +E+           E K++ 
Sbjct: 917  EIRTKDVKAKLAQ----LDVQEKTARKEKQQLLDVQRQVALEREEATATHRHLEEAKKEH 972

Query: 400  AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            A L     Q +  +  L      L ++++     ++++    +      L++
Sbjct: 973  AQLMESSRQLRRVLDELQARKLDLESQLD-----QLQAQSQRLQRHVSSLEA 1019


>gi|229506727|ref|ZP_04396236.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae BX
           330286]
 gi|229510479|ref|ZP_04399959.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae B33]
 gi|229517390|ref|ZP_04406835.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae RC9]
 gi|229605200|ref|YP_002875904.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae
           MJ-1236]
 gi|298499967|ref|ZP_07009773.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MAK
           757]
 gi|229345426|gb|EEO10399.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae RC9]
 gi|229352924|gb|EEO17864.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae B33]
 gi|229357078|gb|EEO21996.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae BX
           330286]
 gi|229371686|gb|ACQ62108.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae
           MJ-1236]
 gi|297541948|gb|EFH77999.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MAK
           757]
          Length = 570

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 11/124 (8%)

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHL 388
             N ++           + + +K   L          I  N+Q    KQQ + Q  +   
Sbjct: 136 AINQQVREQETDPELAELASALKQSQLQAEHELSQRRILHNKQRHFRKQQRL-QAEELPE 194

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSIT 445
           +                + Q +         I  L  R++     +    +      +  
Sbjct: 195 KEKHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAAL 254

Query: 446 TRIL 449
            + L
Sbjct: 255 QKKL 258


>gi|194226159|ref|XP_001499900.2| PREDICTED: similar to amyloid precursor protein [Equus caballus]
          Length = 751

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|193083934|gb|ACF09611.1| hypothetical protein [uncultured marine crenarchaeote
           AD1000-325-A12]
          Length = 438

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 36  CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG--TLNKIEFLPEEGIEFLVIGKIT 93
            V G IS    +   GH +  ++ N++ I+  I+    TL  I    E+G E  + G I+
Sbjct: 270 YVNGTISKKPNVIRGGHIFLKIESNNNHINCAIYAPTITLKTISRKLEKGDEVEIGGGIS 329


>gi|326663860|ref|XP_003197680.1| PREDICTED: sodium channel and clathrin linker 1 [Danio rerio]
          Length = 431

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/349 (9%), Positives = 94/349 (26%), Gaps = 11/349 (3%)

Query: 106 ESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165
            S+  +   +L     + ++K   E L  ++ K+ +  + +  A+ T      +R     
Sbjct: 78  SSIQLAEEASLQREQAQLREKQRAEEL--EKMKDAMKQLIQNAAMRTRKEVESVRKQCNV 135

Query: 166 ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225
              R    +    ++    E   E A+   +    +  +      +              
Sbjct: 136 QIHRMAEELSALQLECADKETQIERAHRERKAVEEELEKVYKEGRVGEPEMRKMEALHQR 195

Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285
             N E +           ++++ ++      +Y       +        +          
Sbjct: 196 CLNAERLKDETQ----LALNSMNNKMKKMEMEY---SEELSRCQEEVRRLQSALTTARQE 248

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
               +     + +  +     + +L K    + +        + +     E  LE  +  
Sbjct: 249 STAVSEERLTLQQENQQMHRDMEALRKECALAQRRAKQQVSSMQQELCVKEQGLESRLRE 308

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHM 404
                 +    +    L      +R     K      Q     LR     +K+++  L +
Sbjct: 309 MEESSKNSSAGLTRLLLAQQKTISRYKDEAKNLTQAFQQKLNSLRSELNRQKQRVQELEI 368

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
             E    +I      + +   +    L  ++       +  ++ L   +
Sbjct: 369 QMEADHQKILEFERQVSEQQEK-NTRLQRRLSQAEQRAASASQQLSVMS 416


>gi|318040982|ref|ZP_07972938.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Synechococcus sp. CB0101]
          Length = 718

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/189 (9%), Positives = 59/189 (31%), Gaps = 10/189 (5%)

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-------R 325
           +A+         +  L A      +  ++        + +A  N  + L          R
Sbjct: 258 IAIEDVAPGWLGVNGLVAGAAAGTLLSLRQWRRRDLQMERAKRNQLRLLRQELPGPLLSR 317

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
             L ++  + +   E  +   +     +   +  + +    +   Q +    + ++Q+  
Sbjct: 318 SELLQVIHQPDGAGEDGLSELWIAALQVKVMLFREAIRQRGEAQNQALAWLGERLQQLEH 377

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
                   E    + ++H L  + +  +  +  H+++L   +   +   +    T +  +
Sbjct: 378 TRH-LALGENNTLLQVIHPLSSEAREELSQIEHHLQELQQAMAEAMQLSVDGILTRLDSS 436

Query: 446 T--RILQSF 452
              + L   
Sbjct: 437 DVTQQLADL 445


>gi|114632699|ref|XP_001137172.1| PREDICTED: serine/threonine kinase 2 isoform 3 [Pan troglodytes]
          Length = 1009

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                +E        RL            K L      L   +       ++ +  L+  
Sbjct: 689 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 748

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
           + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 749 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 805

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
            M R Q   R       +++   R+   L ++       +
Sbjct: 806 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 845


>gi|67971130|dbj|BAE01907.1| unnamed protein product [Macaca fascicularis]
          Length = 751

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|82542245|gb|ABB82034.1| amyloid precursor protein variant 2 [Sus scrofa]
          Length = 751

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|260801311|ref|XP_002595539.1| hypothetical protein BRAFLDRAFT_64593 [Branchiostoma floridae]
 gi|229280786|gb|EEN51551.1| hypothetical protein BRAFLDRAFT_64593 [Branchiostoma floridae]
          Length = 1415

 Score = 39.4 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 49/199 (24%), Gaps = 4/199 (2%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
             PT A    +P     Q       A     +    +  +      + A  N +  L   
Sbjct: 697 SQPTIAPGRPLPTPSVPQGHTGTYGANERLSLELQQQADMFKQQQEMLARQNQEMALHMQ 756

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
           + RL +                                           L+ +    Q  
Sbjct: 757 QERLMQQISPRSQMASHSSMAPQSQMTPNYQLPTYQLPTMGHSPANVSDLDSKIRQLQAE 816

Query: 385 KQHLRYIFLEKKEKIAI-LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
           + HL+ +    K +    L  + E  K R+       ++   R+       +      + 
Sbjct: 817 RDHLQIMLESSKHRHQEELSSVEEAHKARLQLAEESFQRREARLREENEQLVTQHLARLK 876

Query: 444 ITT---RILQSFAYKNTLK 459
                   +Q+  +K  L+
Sbjct: 877 TADEEKAQVQAAHHKKVLE 895


>gi|301769383|ref|XP_002920109.1| PREDICTED: amyloid beta A4 protein-like isoform 2 [Ailuropoda
           melanoleuca]
          Length = 750

 Score = 39.4 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 321 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 380

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 381 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 438

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 439 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 498

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 499 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 530


>gi|221481711|gb|EEE20087.1| trichohyalin, putative [Toxoplasma gondii GT1]
          Length = 394

 Score = 39.4 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 12/181 (6%)

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
             NL+ ++ +   R  + +      L KAL   ++    +R   +     L+  LE    
Sbjct: 185 QANLQKKMQSAEERRNQLRAQEKERLAKALQQVEKVQGKNRLEEEEKSIRLQEKLEEAEK 244

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           R+ +         +S       ++ R+ IL ++  +E+  K     + L  + K  I+  
Sbjct: 245 RRKQLLEE-----ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKIIEE 299

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYKNT 457
            +   + +I      + +  T +E  L    +          ++ ++        +   T
Sbjct: 300 TKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPSAT 359

Query: 458 L 458
           L
Sbjct: 360 L 360


>gi|116696029|ref|YP_841605.1| signal transduction histidine kinase [Ralstonia eutropha H16]
 gi|113530528|emb|CAJ96875.1| signal transduction histidine kinase [Ralstonia eutropha H16]
          Length = 482

 Score = 39.4 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/177 (7%), Positives = 38/177 (21%), Gaps = 27/177 (15%)

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L   +    R        +    L            ++   + +        +     
Sbjct: 192 WALTRHVTGPVRRLREATQALADGELATRTPPVLARRADELGQLARDFDAMADRLQRLMD 251

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITR--IEFILSHKIKSCHTSVSITT------RI 448
            +  +L  +  + ++ +  L   ++    R  +  +   +I+     +            
Sbjct: 252 WREQLLRNIAHELRSPLGRLRLSLELARRRDAMLDLQFERIERETERLDALVERTLQLAR 311

Query: 449 LQSFAY------KNTL-------------KRGYTSIQDTNNNFITQKRNLATKTRIL 486
           L + A          L              RG        +  I         + I 
Sbjct: 312 LHAMAPVLRPIDLAELLDVIVTDARFEAAARGVAICWTPPDELIVDADAATLGSAIE 368


>gi|297193323|ref|ZP_06910721.1| single-stranded DNA-binding protein 1 [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151733|gb|EDY62267.2| single-stranded DNA-binding protein 1 [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 223

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109
           KD  S  +   +W+     +    + G+  +V G++   ++        + Y++ +E + 
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|198429709|ref|XP_002123219.1| PREDICTED: similar to intersectin 2 [Ciona intestinalis]
          Length = 1658

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/198 (9%), Positives = 51/198 (25%), Gaps = 8/198 (4%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
           L A  P     +   V    +    +   + N  + +     + +       L   ++  
Sbjct: 296 LSAMAPNNDDTLDGGVFASFEDRRRDNFQKGNLELEKRRLALLESQQKEKNRLEQQEREQ 355

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
              R +  +               + R         +   L       R+   ++Q   E
Sbjct: 356 REKREKERQEQERKRQEEIERQREQQRAIEREREEQRRKALEQKEAAQREMERQRQLEWE 415

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           ++     R   L+ K +              +      + +   ++      + +   + 
Sbjct: 416 RLR----RKELLQLKLREQESVTSLRAKTKTLDVELNTLLEKRKQL----QTRARDFESR 467

Query: 442 VSITTRILQSFAYKNTLK 459
           +      L++   +  LK
Sbjct: 468 LKEQNEQLEAVNKQRELK 485


>gi|111226185|ref|YP_716979.1| single-stranded DNA-binding protein [Frankia alni ACN14a]
 gi|111153717|emb|CAJ65475.1| Single-strand binding protein 2 (SSB 2) (Helix-destabilizing
          protein 2) [Frankia alni ACN14a]
          Length = 187

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          KD  +  +   IW+     +    ++G   +V G++
Sbjct: 48 KDGEALFLRCSIWRQAAEHVAESLQKGARVIVTGRL 83


>gi|85397968|gb|AAI04913.1| PPFIA2 protein [Homo sapiens]
          Length = 1236

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|289641252|ref|ZP_06473419.1| single-strand binding protein [Frankia symbiont of Datisca
          glomerata]
 gi|289509014|gb|EFD29946.1| single-strand binding protein [Frankia symbiont of Datisca
          glomerata]
          Length = 186

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
          KD  +  +   IW+     +    ++G   +V G++
Sbjct: 48 KDGDALFLRCSIWRQAAEHVAESLQKGARVIVQGRL 83


>gi|149720878|ref|XP_001496031.1| PREDICTED: dystrobrevin, alpha isoform 2 [Equus caballus]
          Length = 743

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|321475460|gb|EFX86423.1| hypothetical protein DAPPUDRAFT_308444 [Daphnia pulex]
          Length = 411

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/213 (9%), Positives = 61/213 (28%), Gaps = 6/213 (2%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
             D        +     P      +  I +  ++                +    +   +
Sbjct: 204 VDDEAVAEMNLSMNAHFPFAVCGSTDFIRVGNKMVRARQYPWGTVQVENENHCDFVKLRE 263

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
             +  +   L        + +   +  +   F+ + +  K        +  RQ +   + 
Sbjct: 264 MLIRTNMEDLRETTHIRHYEIYRRLRLEQMGFSDLDSDNKPQSFQQTYEHKRQLL---RM 320

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            ++Q   +  +   +  KEK   L    ++ ++R   L     +   +++     +++  
Sbjct: 321 ELQQKEDEMRQQFVIRVKEKETELKEAEKELQSRFDRLKKEHAEEKRKLDEA-KKRLEDN 379

Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
              +    + L + +   TL  G T     N  
Sbjct: 380 QNELVKRRQQLLTQS-TGTLGHG-TLTLGKNKK 410


>gi|319945375|ref|ZP_08019636.1| hypothetical protein HMPREF0551_2484 [Lautropia mirabilis ATCC
           51599]
 gi|319741368|gb|EFV93794.1| hypothetical protein HMPREF0551_2484 [Lautropia mirabilis ATCC
           51599]
          Length = 915

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/167 (10%), Positives = 47/167 (28%), Gaps = 9/167 (5%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                 A    +++  ++ K      L   L      +  +     +        L   +
Sbjct: 232 WSQYRAAVAQKVLLETLEQKHEARLELRGRLLCMKPLIDDALAHWQQHYDTRHQALTREL 291

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            +       + +      L        Q   + +Q  +Q+     R+  + +++   +L 
Sbjct: 292 GQHDTEMKRLRDEDIQ--LARQQSLAEQEEKQLRQQTDQLQALQRRFALIPERQ---LLD 346

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             R   +  I  +   I +  +R    +  +I      +      L+
Sbjct: 347 QQRAALQQDIDAIVVRIGQAQSREPAAIEREI----QRLQRELAQLE 389


>gi|297702488|ref|XP_002828208.1| PREDICTED: LOW QUALITY PROTEIN: dystrobrevin alpha-like [Pongo
           abelii]
          Length = 743

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|221502223|gb|EEE27961.1| trichohyalin, putative [Toxoplasma gondii VEG]
          Length = 394

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 12/181 (6%)

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
             NL+ ++ +   R  + +      L KAL   ++    +R   +     L+  LE    
Sbjct: 185 QANLQKKMQSAEERRNQLRAQEKERLAKALQQVEKVQGKNRLEEEEKSIRLQEKLEEAEK 244

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           R+ +         +S       ++ R+ IL ++  +E+  K     + L  + K  I+  
Sbjct: 245 RRKQLLEE-----ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKIIEE 299

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYKNT 457
            +   + +I      + +  T +E  L    +          ++ ++        +   T
Sbjct: 300 TKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPSAT 359

Query: 458 L 458
           L
Sbjct: 360 L 360


>gi|164660290|ref|XP_001731268.1| hypothetical protein MGL_1451 [Malassezia globosa CBS 7966]
 gi|159105168|gb|EDP44054.1| hypothetical protein MGL_1451 [Malassezia globosa CBS 7966]
          Length = 1065

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 70/218 (32%), Gaps = 13/218 (5%)

Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306
           +G+   +   D  AD  A TP    +       H Q S  +++          ++ ++  
Sbjct: 148 VGNLCAFLPQDRVADFAAMTPQRLLQDTEHAAGHAQLSDWHMQLIECGRQKSELQSRLEQ 207

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRL--------PRELEHNLEIIIFRKYRHFNHIINRIK 358
                  L   +  L     R +            E+          K R+      R +
Sbjct: 208 EQREHDYLEERNTVLERDVRRYEERIALEKRVCALEVRIAFAEFHDSKSRYHAAHAKREE 267

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYL 416
           +   +  I ++ + + ++ +  ++ + +        ++E       LR     + R+   
Sbjct: 268 AKRALERIFQSIEPLEQELERAQEKLDKMELVSSSHRREADDASSALRRYSTARERLDAE 327

Query: 417 HTHIKKLITRIE-FILSHK--IKSCHTSVSITTRILQS 451
              + +   R+E      +  ++   + ++   R +++
Sbjct: 328 MAALSEQEKRLEAQAAERRELMQQMRSRIADLERAIEA 365


>gi|114640307|ref|XP_001145139.1| PREDICTED: dixin isoform 2 [Pan troglodytes]
          Length = 472

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 64  YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 123

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 124 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 181

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 182 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 240

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 241 SYHQVDLER 249


>gi|85057957|ref|YP_456872.1| single-stranded DNA binding protein [Aster yellows witches'-broom
          phytoplasma AYWB]
 gi|85057962|ref|YP_456876.1| single-stranded DNA binding protein [Aster yellows witches'-broom
          phytoplasma AYWB]
 gi|84790071|gb|ABC65793.1| single-stranded DNA binding protein [Aster yellows witches'-broom
          phytoplasma AYWB]
 gi|84790093|gb|ABC65797.1| single-stranded DNA binding protein [Aster yellows witches'-broom
          phytoplasma AYWB]
 gi|307902849|emb|CBX25034.1| SSB protein [New Jersey aster yellows phytoplasma]
          Length = 104

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
           G+IS      +  +     KD    I  +I++     +     +G +  + G ++ 
Sbjct: 24 EGQISKLDFQIAVNN-----KDKTQFIPCVIFRNQAENMSMYLHKGSKVYLEGTLSI 75


>gi|296222499|ref|XP_002757206.1| PREDICTED: dystrobrevin alpha [Callithrix jacchus]
          Length = 743

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|291404779|ref|XP_002718767.1| PREDICTED: serine/threonine kinase 2 isoform 1 [Oryctolagus
            cuniculus]
          Length = 1241

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 41/145 (28%), Gaps = 14/145 (9%)

Query: 298  RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
            R    K               + +   +  LD   +++    +  +    R   +   ++
Sbjct: 947  RKELMKRRREELAQSQHAQEQEFVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQL 1006

Query: 358  KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                     +   +H+ EK Q ++Q +K                  M R Q   R     
Sbjct: 1007 MRAREAAIWELEERHLQEKHQLLKQQLKDQY--------------FMQRHQLLKRHEKET 1052

Query: 418  THIKKLITRIEFILSHKIKSCHTSV 442
              +++   R+   L ++       +
Sbjct: 1053 EQMQRYNQRLIEELKNRQTQERARL 1077


>gi|260827092|ref|XP_002608499.1| hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae]
 gi|229293850|gb|EEN64509.1| hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae]
          Length = 1975

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 57/221 (25%)

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
                  F      R      +     +GH     +A+                +   + 
Sbjct: 163 DWSQDKPFAYVKTARETEKIRLVKFDPLGHHLLTGIANVPNVRPFDAAGVVQVDSSDSET 222

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
            +     + E      +       ++ L+S+ + L    + LS +  RLD++  E+ + +
Sbjct: 223 DMLPEPDDSELPPRMSVWDRRSRVLHRLHSMEQDLRRRLELLSSAAARLDQMENEMRNMM 282

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                ++           +S       + +   I  ++     +               +
Sbjct: 283 GSFQGQEQGMLPRGRVSARSLADPTANRADSTAIRARRGGSSNMPPSLQGTAGRASSSSL 342

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
             L         RI      I +L  R+    S  +     
Sbjct: 343 HDLDARLSINHQRIRRTQEFIDRLRARLGLQPSSTLSRYEN 383


>gi|119587576|gb|EAW67172.1| DIX domain containing 1, isoform CRA_a [Homo sapiens]
          Length = 437

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 29  YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 88

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 89  QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 146

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 147 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 205

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 206 SYHQVDLER 214


>gi|317419273|emb|CBN81310.1| Myosin phosphatase Rho-interacting protein [Dicentrarchus labrax]
          Length = 1595

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/157 (7%), Positives = 44/157 (28%), Gaps = 2/157 (1%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            + +      L   L+A              L R   E +  ++            + + 
Sbjct: 772 WQRLHTLNQDLQGELEAQKRKQDLAQQQIRTLKRSYTEAQDAVDRHETDIQALQTKLASA 831

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +             ++ L+ +Q   +  ++         + ++        + +  +   
Sbjct: 832 MAEILASEQAVARMRNELKLEQERSKEQEEEHGRSETTLRAQLKDSEDRLREVEANLLER 891

Query: 417 HTHIKKLITR--IEFILSHKIKSCHTSVSITTRILQS 451
           +  ++ L  +  ++     +I+     +   T  L +
Sbjct: 892 NQALRHLERQQALQRDHMREIQRLQERLQEVTARLSA 928


>gi|126290408|ref|XP_001373148.1| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor)
           subunit 13B, [Monodelphis domestica]
          Length = 1107

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/215 (7%), Positives = 57/215 (26%), Gaps = 17/215 (7%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D AA  +         +    +            + +      ++     + +    L
Sbjct: 146 LQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKL 205

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                             + +  NL   I R    F      +++  L   + +  Q + 
Sbjct: 206 KKIRAM-----RGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 258

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430
           + ++      + +   +      ++  L+   +         ++ +++    +       
Sbjct: 259 DLKKGKLNGFQSYNGRLSGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKDLLNKRNMEV 318

Query: 431 --LSHKIKSCHTSVSITTRILQ----SFAYKNTLK 459
             +  +I      +      L     + + +++L 
Sbjct: 319 AMMDKRINELRERLYGKKIQLNRVNGTASPQSSLS 353


>gi|40950176|gb|AAR97728.1| beta amyloid precursor protein isoform APP751 [Canis lupus
           familiaris]
          Length = 751

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|3912955|sp|Q95241|A4_SAISC RecName: Full=Amyloid beta A4 protein; AltName: Full=ABPP;
           Short=APP; AltName: Full=Alzheimer disease amyloid A4
           protein homolog; Contains: RecName: Full=N-APP;
           Contains: RecName: Full=Soluble APP-alpha;
           Short=S-APP-alpha; Contains: RecName: Full=Soluble
           APP-beta; Short=S-APP-beta; Contains: RecName: Full=C99;
           Contains: RecName: Full=Beta-amyloid protein 42;
           AltName: Full=Beta-APP42; Contains: RecName:
           Full=Beta-amyloid protein 40; AltName: Full=Beta-APP40;
           Contains: RecName: Full=C83; Contains: RecName:
           Full=P3(42); Contains: RecName: Full=P3(40); Contains:
           RecName: Full=C80; Contains: RecName:
           Full=Gamma-secretase C-terminal fragment 59; AltName:
           Full=Gamma-CTF(59); Contains: RecName:
           Full=Gamma-secretase C-terminal fragment 57; AltName:
           Full=Gamma-CTF(57); Contains: RecName:
           Full=Gamma-secretase C-terminal fragment 50; AltName:
           Full=Gamma-CTF(50); Contains: RecName: Full=C31; Flags:
           Precursor
 gi|4262047|gb|AAD14347.1|S81024_1 beta-amyloid precursor protein/beta PP [Saimiri sciureus]
          Length = 751

 Score = 39.0 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|325203636|gb|ADY99089.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240355]
          Length = 1161

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKFLTAQLNRQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|296271509|ref|YP_003654141.1| single-strand binding protein [Thermobispora bispora DSM 43833]
 gi|296094296|gb|ADG90248.1| single-strand binding protein [Thermobispora bispora DSM 43833]
          Length = 171

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109
           KD  +  +   +W+ T   +    + G+  +V G++   ++        + Y++ ++ + 
Sbjct: 49  KDGEALFLTCNVWRQTAENVAESLQRGMRVIVQGRLRQRSYETKEGERRTVYEVEVDDVG 108

Query: 110 PS 111
           PS
Sbjct: 109 PS 110


>gi|12698015|dbj|BAB21826.1| KIAA1735 protein [Homo sapiens]
          Length = 493

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 85  YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 144

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 145 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 202

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 203 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 261

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 262 SYHQVDLER 270


>gi|312074974|ref|XP_003140210.1| hypothetical protein LOAG_04625 [Loa loa]
 gi|307764627|gb|EFO23861.1| hypothetical protein LOAG_04625 [Loa loa]
          Length = 1051

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 8/196 (4%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI--KYKINTLNSLLKALPNSDQTLSC 323
                  M       LQ  L  L+A+  +   R+   + +  +       L + +  L  
Sbjct: 101 ATQKEGRMEQEQINKLQHHLQELQAQREDQETRISTLESRYMSAQREATCLRDLNDKLEH 160

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
                D   R  E  +  +  R       +   +K    + +++   Q  +E     EQ 
Sbjct: 161 RLANKDAAVRLNEEKVRSLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQ- 219

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                +    E+  ++A     R     R        ++   R+   +   +   +  + 
Sbjct: 220 ----KQLSAEEQMNRLARQVEERSAELERAVQREKMNEEHNQRLSSTVDKLLSESNDRLQ 275

Query: 444 -ITTRILQSFAYKNTL 458
                 +Q+   KN L
Sbjct: 276 LHLKERMQALDEKNRL 291


>gi|294661197|ref|YP_003573073.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336348|gb|ACP20945.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 846

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
           +K R+   E+ +  E   +       L ++ + A       Q + R+      +++   R
Sbjct: 303 EKVRRQAAERLRQEEASERLAQEEERLRQEAERAAGEERIRQEEGRLQQAAERLRQEEGR 362

Query: 427 IEFILSHKIKSCHTSVSITTRILQ 450
           ++      ++     +      L+
Sbjct: 363 LQQAAER-LRQEEGRLQQAAERLK 385


>gi|195385895|ref|XP_002051640.1| GJ11172 [Drosophila virilis]
 gi|194148097|gb|EDW63795.1| GJ11172 [Drosophila virilis]
          Length = 1390

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 47/182 (25%), Gaps = 8/182 (4%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                  + +  A         ++ +          L +    L+          +   L
Sbjct: 152 WRQYLQHVQSFLACAIPEDYSSLREQQQLCAIHQNLLISQQSVLAETPLESELSEQYKAL 211

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                  L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 212 TNLHNETLSRIMQRNEELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 271

Query: 392 FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
            L+ +    +L + R  +Q+          +K     +   +  +  S +  +S     L
Sbjct: 272 HLKARLDALLLQLTRGEQQSAALKAQQQELLKYCDDALATAMRMEQASINQRISNLRAAL 331

Query: 450 QS 451
           ++
Sbjct: 332 ET 333


>gi|195129387|ref|XP_002009137.1| GI11425 [Drosophila mojavensis]
 gi|193920746|gb|EDW19613.1| GI11425 [Drosophila mojavensis]
          Length = 1983

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 54/177 (30%), Gaps = 8/177 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
                + +  + + +    N + S  + L   D+ L   R +L++       +      +
Sbjct: 222 EEEREKQDLEMRQFLDKYENQVVSWRQQLDKKDKELEQMRKKLEQTTSGQSTSDSTSSSK 281

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHM 404
           +               L H ++   Q I   +  ++ +  + +    +  + +       
Sbjct: 282 QSPRQEE-------THLRHLLELREQRIESLEGQLKSMSDEMVTSTKVMNQLREQHESKK 334

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
             +Q       +   ++    R++ +      +   +V    + L +       KRG
Sbjct: 335 NPQQPNACCKLIEERLRAANARLKQLSELLDSTEQDNVLKAKQALHALNALEAYKRG 391


>gi|227811730|ref|YP_002811740.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae
           M66-2]
 gi|254850369|ref|ZP_05239719.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           MO10]
 gi|227010872|gb|ACP07083.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae
           M66-2]
 gi|227014735|gb|ACP10944.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae
           O395]
 gi|254846074|gb|EET24488.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           MO10]
          Length = 559

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 11/124 (8%)

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHL 388
             N ++           + + +K   L          I  N+Q    KQQ + Q  +   
Sbjct: 125 AINQQVREQETDPELAELASALKQSQLQAEHELSQRRILHNKQRHFRKQQRL-QAEELPE 183

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSIT 445
           +                + Q +         I  L  R++     +    +      +  
Sbjct: 184 KEKHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAAL 243

Query: 446 TRIL 449
            + L
Sbjct: 244 QKKL 247


>gi|82775699|ref|YP_402046.1| exonuclease subunit SbcC [Shigella dysenteriae Sd197]
 gi|309786976|ref|ZP_07681588.1| exonuclease sbcC [Shigella dysenteriae 1617]
 gi|81239847|gb|ABB60557.1| ATP-dependent dsDNA exonuclease [Shigella dysenteriae Sd197]
 gi|308924554|gb|EFP70049.1| exonuclease sbcC [Shigella dysenteriae 1617]
          Length = 1045

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/161 (8%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   R+ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRRQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|332225624|ref|XP_003261983.1| PREDICTED: dystrobrevin alpha isoform 1 [Nomascus leucogenys]
          Length = 743

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|320544542|ref|NP_001188694.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster]
 gi|318068309|gb|ADV36944.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster]
          Length = 12345

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7698 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7757

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7758 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7816

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7817 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7876

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7877 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7908



 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278   KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                    + +  +         ++ +          L +    LS          +   L
Sbjct: 11095 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 11154

Query: 332   PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                    L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 11155 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 11214

Query: 392   FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 11215 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 11274

Query: 450   QS 451
             ++
Sbjct: 11275 KT 11276


>gi|157117698|ref|XP_001658893.1| serine/threonine protein kinase [Aedes aegypti]
 gi|108884560|gb|EAT48785.1| serine/threonine protein kinase [Aedes aegypti]
          Length = 960

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/185 (10%), Positives = 60/185 (32%), Gaps = 9/185 (4%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
           +     +         +    N E     + +     K     +L     N  Q  +   
Sbjct: 573 STRQEGDRKAFELHKKKEYKANKERWKRELSMDDSTPKRQRDATLQSQKDNLKQAEAQEE 632

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
            R+ R+ +           RK      +++ +++  L   + K +Q + +    +   +K
Sbjct: 633 QRMLRVQKNYIDLEMRKFRRKKMI---LLHDLENQLLRDELSKKQQQLEQAHGML---IK 686

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
            H +   LE +++ ++  +  EQ   +     + ++     ++      ++     +   
Sbjct: 687 HHEKTQDLEYRQQKSVHALREEQISKQ---HESELRNQKEYMDRAERELLRRHALELKQQ 743

Query: 446 TRILQ 450
            + L+
Sbjct: 744 PKSLK 748


>gi|609449|gb|AAA58727.1| amyloid precursor protein [Homo sapiens]
          Length = 484

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S+IP  +A   +       T  D              E 
Sbjct: 243 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 302

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 303 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 360

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 361 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 420

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 421 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 452


>gi|117924303|ref|YP_864920.1| chromosome segregation ATPase [Magnetococcus sp. MC-1]
 gi|117608059|gb|ABK43514.1| Chromosome segregation ATPases-like protein [Magnetococcus sp.
           MC-1]
          Length = 1787

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 60/198 (30%), Gaps = 8/198 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D  AD       G  +  +   E ++    + +         L +  +         L +
Sbjct: 702 DRTADALGEALQGQQQQLLTQLEGMEDLRQSQQEMRAAQQQGLQRGDVMQQLVESIHLRH 761

Query: 317 SDQTLSCSRYRLDRLPRELEHNL----EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
           +D+     R   +RL R  +  +    E ++    +         +   ++  +Q  +  
Sbjct: 762 ADRLARLQRKLANRLHRLEQQLVSANSEALLQGGQQLQQLGEAVDRQVAMMAQLQAEQIQ 821

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
             + QQ   Q ++          ++ + ++   ++Q +         ++ +  +++   S
Sbjct: 822 KGDAQQQSAQRLEAMNEEQQSRLQQVVELVQQAQQQARGEGEATERQLQGIAAQLQQAAS 881

Query: 433 HKIKSCHTSVSITTRILQ 450
           +               L 
Sbjct: 882 N----EQQRQGELGSQLD 895


>gi|307729325|ref|YP_003906549.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003]
 gi|307583860|gb|ADN57258.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003]
          Length = 1172

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 50/384 (13%), Positives = 112/384 (29%), Gaps = 22/384 (5%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 629  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196
                     +        V +   +       L++ +        +  +   +I   + +
Sbjct: 686  AAIRAEAAHSQAAQALTEVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745

Query: 197  LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254
            +N   E +   R +      R  G + +L   F D  +     +  +        + D  
Sbjct: 746  INAQIEEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEELSAARGQARDLDRA 805

Query: 255  LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
              D  +AA   A              E  +    +LE     +     +     L   L 
Sbjct: 806  ATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865

Query: 313  ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 ++ L  +R  LD L  +L    E  +          +  ++       +++    
Sbjct: 866  IRAVKEEALHAARLELDDLTAKLRAADETRLST-----ERALQPLRDRINELQLKEQAAR 920

Query: 373  ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRIE 428
            +   +Q IEQ+    +    L+ K    +     +    RI      +  +       ++
Sbjct: 921  L-NAEQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAIIALGPVNMAALDELK 979

Query: 429  FILSHK--IKSCHTSVSITTRILQ 450
                 K  + S    ++     L+
Sbjct: 980  AATERKTFLDSQSADLTSAIETLE 1003


>gi|302559694|ref|ZP_07312036.1| single-strand binding protein [Streptomyces griseoflavus Tu4000]
 gi|302477312|gb|EFL40405.1| single-strand binding protein [Streptomyces griseoflavus Tu4000]
          Length = 143

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           KD  S  +   +W+     +    + G+  +V G++   ++      +  +  L     G
Sbjct: 48  KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107

Query: 115 T 115
            
Sbjct: 108 A 108


>gi|298674036|ref|YP_003725786.1| phosphoesterase RecJ domain-containing protein [Methanohalobium
           evestigatum Z-7303]
 gi|298287024|gb|ADI72990.1| phosphoesterase RecJ domain protein [Methanohalobium evestigatum
           Z-7303]
          Length = 711

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 20/156 (12%)

Query: 9   SLDHPEY-SVSELSYHLKHIVESNLSH-----VCVRGEISGYRGIHSSGHAYFSLKDNHS 62
             +  E+ +V EL   L   + S +       V + GE+   +     G   F++ D   
Sbjct: 180 PKNIKEFHTV-ELEKELPIKLSSQIPDFIGRVVRIEGEVIQVKQTA--GPTIFTISDEAG 236

Query: 63  RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK-YQIIIESL-IPSG--SGTLLT 118
            I    ++    +     +  +     G+IT         Q+ I+S+   SG     +  
Sbjct: 237 LITGAAFEKAGERAYPHIDSNMVVTATGEIT---SRGDEVQLEIKSMKRLSGEKESAVWE 293

Query: 119 ALEKRKKK----LLEEGLFSDQHKNPIPFIPKIIAV 150
            +EK   +       E L   +  + +    K +A 
Sbjct: 294 RIEKAIDERAEPYESEFLIESEILDKLKPGMKKVAK 329


>gi|296226301|ref|XP_002758866.1| PREDICTED: pleckstrin homology-like domain family B member 2
           [Callithrix jacchus]
          Length = 1156

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/172 (10%), Positives = 56/172 (32%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   I+     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 645 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 704

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     +    + E+++++ Q + + +         +   
Sbjct: 705 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 762

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +     ++   ++    ++    +   S +
Sbjct: 763 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLS 813


>gi|262277199|ref|ZP_06054992.1| ATP-dependent DNA helicase RecG [alpha proteobacterium HIMB114]
 gi|262224302|gb|EEY74761.1| ATP-dependent DNA helicase RecG [alpha proteobacterium HIMB114]
          Length = 683

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 59  DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI-IIESLIPSGSGT 115
           D  S+ID + +    N I+ +     E ++ GK+T +    KYQI   + +  +  G 
Sbjct: 85  DEFSKIDLVFFNSRENYIKQILPLNEEVVISGKVTFYKN--KYQITNPDYIRSTDKGA 140


>gi|242240333|ref|YP_002988514.1| SMC domain protein [Dickeya dadantii Ech703]
 gi|242132390|gb|ACS86692.1| SMC domain protein [Dickeya dadantii Ech703]
          Length = 1227

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/183 (8%), Positives = 47/183 (25%), Gaps = 8/183 (4%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           ++     +  +      +  L+ +   +   +     + L       Q     R      
Sbjct: 803 QLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREETNLAIKSQHQQLAELQRSLEQAQ 862

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLR 389
            +  +     ++             ++ +     IQ    + HI      +  + +QH R
Sbjct: 863 QQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQNSQSHISHLNGELGSLEQQHQR 922

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                          LRE            +      ++    H++      ++   + +
Sbjct: 923 ADDALNAATEQFGAALRETEFQDEADFRQAL------LDESTRHQLMMLKERLNQRQQQV 976

Query: 450 QSF 452
           +S 
Sbjct: 977 ESV 979


>gi|320544538|ref|NP_001188692.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster]
 gi|318068307|gb|ADV36942.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster]
          Length = 8382

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7698 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7757

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7758 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7816

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7817 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7876

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7877 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7908


>gi|320544548|ref|NP_001188697.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster]
 gi|318068312|gb|ADV36947.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster]
          Length = 11999

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7339 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7398

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7399 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7457

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7458 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7517

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7518 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7549



 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278   KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                    + +  +         ++ +          L +    LS          +   L
Sbjct: 10736 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 10795

Query: 332   PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                    L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 10796 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 10855

Query: 392   FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 10856 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 10915

Query: 450   QS 451
             ++
Sbjct: 10916 KT 10917


>gi|320544546|ref|NP_001188696.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster]
 gi|318068311|gb|ADV36946.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster]
          Length = 11986

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7339 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7398

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7399 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7457

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7458 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7517

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7518 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7549



 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278   KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                    + +  +         ++ +          L +    LS          +   L
Sbjct: 10736 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 10795

Query: 332   PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                    L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 10796 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 10855

Query: 392   FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 10856 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 10915

Query: 450   QS 451
             ++
Sbjct: 10916 KT 10917


>gi|269926941|ref|YP_003323564.1| RNA polymerase, sigma 70 subunit, RpoD subfamily [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269790601|gb|ACZ42742.1| RNA polymerase, sigma 70 subunit, RpoD subfamily [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 596

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
           V+ I+   I + + +G E D +L D+  D +AP P  AA                 ++ L
Sbjct: 377 VQKISQEPISLENPVGEEEDTSLGDFIQDHKAPAPMDAAS----------------QSLL 420

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
            + I +++K+       +L      D      R     L       ++            
Sbjct: 421 RDQIDQVLKHLSERERGVLLMRFGLDCEPRPYREVAHILAVSPNQVMQAESRVLDMVAAR 480

Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
           +        L      +R  + E+   ++ ++ +  LR I  + +E +A + +     + 
Sbjct: 481 LSPEDYQMLLDRFGHLDRSPMSEESFRLKYKLTQTQLREIDQKLREALASVMLHVPAPER 540

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            +      +     R    +          +      
Sbjct: 541 DMMRFRFGLDIGQPRTLEEVGRAFGVTRERIRQIESK 577


>gi|196249927|ref|ZP_03148622.1| DNA polymerase III, alpha subunit [Geobacillus sp. G11MC16]
 gi|196210441|gb|EDY05205.1| DNA polymerase III, alpha subunit [Geobacillus sp. G11MC16]
          Length = 1093

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 29   ESNLSHVCVRGEISGYRGIHSS-G--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85
            E + S V V G I+  R   +  G   A+ ++ D    ++A+ +     +     EEG  
Sbjct: 936  EVHGSPVVVGGCIAELRKTRTKFGEEMAFITVSDESGELEAVAFPSVYARAAGELEEGNF 995

Query: 86   FLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
             L+ G +     + + Q+++          L 
Sbjct: 996  VLLAGTVDM--RAGRRQLVLRRAERLPVSALY 1025


>gi|47215101|emb|CAF98175.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 911

 Score = 39.0 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/175 (7%), Positives = 47/175 (26%), Gaps = 4/175 (2%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
                    +   +    +       +K        L K   N D  +       ++L  
Sbjct: 90  LWEETCTYITHCHSRIEWVWLHWSEYLKAIEEFEAWLSKHQRNLDVRIELQLGLKEKL-- 147

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                  + +   +     +   +     +HN  ++     + Q+ +++     +R    
Sbjct: 148 WQVDQQRVALSDIHGQAGLLERLLDEAAALHNRTQDPSVEAQAQERLQEAYND-VRDRAE 206

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           E+   +  +    +  +  +    + +     R+  ++     S    +     +
Sbjct: 207 ERLALLHRMAEEHQTFQECVKRFQSWLLTETKRLTTLMERD-DSAQDKLRALQAL 260


>gi|297275172|ref|XP_001102769.2| PREDICTED: dystrobrevin alpha [Macaca mulatta]
          Length = 770

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 446 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 505

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 506 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 565

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 566 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 598


>gi|258620242|ref|ZP_05715281.1| GGDEF family protein [Vibrio mimicus VM573]
 gi|258587600|gb|EEW12310.1| GGDEF family protein [Vibrio mimicus VM573]
          Length = 411

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/240 (10%), Positives = 62/240 (25%), Gaps = 28/240 (11%)

Query: 234 RAIANSSIPIISAIGHETDW-----------------TLADYAADLRA---PTPTGAAEM 273
            A   S++ I   +G E+                   T  D   +            + +
Sbjct: 15  FACTISTVLIWKMVGLESSIKGMAEIMESFQWDKFFETGIDEVDEQHQYLVNIVNRYSSL 74

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
                  L    + L            + +       +  L + +Q +   R  +  +  
Sbjct: 75  LAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSFMSEVFS 133

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                 ++      +    + + +    L  +    RQ +        +           
Sbjct: 134 MQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSAKEAYAK 187

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E++EK A    L          +    ++L+  +   L  K+      +    R L++ +
Sbjct: 188 EEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANRQLEALS 246


>gi|73998466|ref|XP_544006.2| PREDICTED: similar to serine/threonine kinase 2 isoform 1 [Canis
            familiaris]
          Length = 1242

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 925  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 984

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 985  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1038

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1039 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1078


>gi|288560822|ref|YP_003424308.1| archaea-specific RecJ-like exonuclease [Methanobrevibacter
           ruminantium M1]
 gi|288543532|gb|ADC47416.1| archaea-specific RecJ-like exonuclease [Methanobrevibacter
           ruminantium M1]
          Length = 780

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 14  EYSVSELSYHLKHI----V-ESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67
           EY V +LS ++       + ES+L   V V GE+       +SG   F++ D  S   A 
Sbjct: 218 EYVVKKLSKNIGRTKIETLDESSLKSIVKVYGEVIQI--QQTSGPTIFTITDETSITWAA 275

Query: 68  IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108
            +     ++    E G    VIG++     + + QI  ES+
Sbjct: 276 AFNEPGVRMYPEIEVGDIVEVIGEVN--QHNGEIQIESESI 314


>gi|195034074|ref|XP_001988821.1| GH10368 [Drosophila grimshawi]
 gi|193904821|gb|EDW03688.1| GH10368 [Drosophila grimshawi]
          Length = 3957

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 46/182 (25%), Gaps = 8/182 (4%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                   + +  A         ++ +          L +    LS          +   L
Sbjct: 2707 WRQYLQHVQSFLACAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2766

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                   L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 2767 TNLHNETLSRIMQRNDELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2826

Query: 392  FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             L+ +    +L + R  +Q+          +      +   +  +  S +  +S     L
Sbjct: 2827 HLKARMDALLLQLARGEQQSAALKAQQQQLLPYCDDALATAMRMEQASINQRISNLRAAL 2886

Query: 450  QS 451
            ++
Sbjct: 2887 ET 2888


>gi|149689692|ref|XP_001497765.1| PREDICTED: STE20-like kinase (yeast) isoform 2 [Equus caballus]
          Length = 1211

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 3/160 (1%)

Query: 283  SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +E        RL            K L      L   +       ++ +  L+  
Sbjct: 891  QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 950

Query: 343  IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
            + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 951  LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1007

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
             M R Q   R       +++   R+   L  +       +
Sbjct: 1008 FMQRHQLLKRHEKETEQMQRYNQRLIEELKTRQTQERARL 1047


>gi|149411138|ref|XP_001515697.1| PREDICTED: similar to dystrobrevin, alpha, isoform 3
           [Ornithorhynchus anatinus]
          Length = 743

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 45/155 (29%), Gaps = 10/155 (6%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            N  + L       +       +   +                   F I   ++ RQ I 
Sbjct: 418 SNPSRMLDSPNRLDEEHRLIARYAARLAAETSSSQPGQQRGASDISFTIDANKQQRQLIA 477

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432
           E +    +I+++  R     ++         ++       +  L     +L  R+  +  
Sbjct: 478 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 537

Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
            + +     +    ++L++        +  +T+ R
Sbjct: 538 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|86743196|ref|YP_483596.1| single-stranded DNA-binding protein [Frankia sp. CcI3]
 gi|86570058|gb|ABD13867.1| single-strand binding protein [Frankia sp. CcI3]
          Length = 186

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 58  KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI---TTFPGSSK----YQIIIESLI 109
           KD  +  +   IW+     +    ++G   +V G++   +      +     ++ ++ + 
Sbjct: 48  KDGEALFLRCSIWRQAAEHVAESLQKGARVIVTGRLKQRSFETREGEKRTVIELDVDEIG 107

Query: 110 PS 111
           PS
Sbjct: 108 PS 109


>gi|59710083|ref|NP_001011731.1| hyaluronan mediated motility receptor [Takifugu rubripes]
          Length = 834

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/178 (9%), Positives = 49/178 (27%), Gaps = 2/178 (1%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
           V  ++           +    +   ++     +  +        + L   R     +   
Sbjct: 500 VKERDEALRQREEQRGQSVAQLQDEMEKAQKLMEEVSHEKEEIREQLQHERQEKATIHAA 559

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           L+   E +      H       +K    +  + + R+ ++   +H  Q      + +   
Sbjct: 560 LQEKSEALESECINHQETRSELLKLQAELEKVCEERKTLVSHVEHANQSRLDVEKQLEKA 619

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           ++ +  +   L EQ +  + +       L       L  +++            LQ  
Sbjct: 620 EQLRNQLQAHLEEQQQKDVHFQTQL--DLSQEKNQSLRRELEQQREGSRALQEQLQVL 675


>gi|70729273|ref|YP_259010.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5]
 gi|68343572|gb|AAY91178.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5]
          Length = 1162

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L  +Q       +  R    E  E+  ++          I  + 
Sbjct: 245 GQRESVIGSQEVSFEALVAEQRNADAAIERFRDGHHELSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330


>gi|297297158|ref|XP_001086697.2| PREDICTED: a-kinase anchor protein 13-like [Macaca mulatta]
          Length = 2756

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 56/205 (27%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2415 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQVVQSIVHLHEL 2474

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R         + +       +++K RQ +   Q+  
Sbjct: 2475 LSTLQGVVLQQDSYIEDQKLVLSERALTRTLSRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2534

Query: 381  EQ----------------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             Q                   +    +  +++EK+       E+ +  +       +  +
Sbjct: 2535 AQYLEEKRRREREWEARERELREREALLAQREEKVQQGQQDLEKEREELQQKKGTYQYDL 2594

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +      L
Sbjct: 2595 ERL-RAAQKQLEREQEQLRREAERL 2618


>gi|307173985|gb|EFN64703.1| Serine/threonine-protein kinase MRCK beta [Camponotus floridanus]
          Length = 1877

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 52/163 (31%), Gaps = 11/163 (6%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE---------LEHNLEIIIFRKYR 348
             ++ +   L    + L N  + ++    ++  + +              L   +  +  
Sbjct: 792 NRLQGERRQLEDEYEELRNKKEAIAQWEAQITEIIQWVSDEKDARGYLQALATKMTEELE 851

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
              H      S      +         + Q ++++   +L+     + +    +     +
Sbjct: 852 FLKHSGGISGSVGSGTTLTDKNWR-NRRSQKLDKMELLNLQSSLQSEIQAKQAISEELTK 910

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           T++ +      +K L  R++  +SH++K     +      L +
Sbjct: 911 TRSDLIAAQKELKDLKQRLDT-MSHELKRKDMQIKELQARLDT 952


>gi|261344278|ref|ZP_05971922.1| cell division protein MukB [Providencia rustigianii DSM 4541]
 gi|282567881|gb|EFB73416.1| cell division protein MukB [Providencia rustigianii DSM 4541]
          Length = 1479

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 9/179 (5%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +      L +L     +  +   + K       L AL         +  + ++  + ++
Sbjct: 424 NRARELCQLPDLTIENADEWLETFEAKEQQATESLLALEQKMSVADAAHSQFEQAYQLVK 483

Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
             +  +   +        + +      L   +Q  R  + E QQ ++             
Sbjct: 484 TMVGDVSRSEAYQQARTLLRDWSSQQHLAERVQPLRMQLSELQQRLDSQKNAEKVLNEFC 543

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448
           K+   +      +     +  L   +     +    R+E  +  +++     +S  +  
Sbjct: 544 KRHGQSYEPDELDGLMAELEALQEELSLGVSESGERRME--MRQELEQIRQRISQLSAK 600


>gi|195385902|ref|XP_002051643.1| GJ11158 [Drosophila virilis]
 gi|194148100|gb|EDW63798.1| GJ11158 [Drosophila virilis]
          Length = 8387

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 59/212 (27%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +       +L +   +   +
Sbjct: 7703 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAALNRDWQDLVHS 7762

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R +L +L    + + E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7763 LEQRRDKLQQLAEHWD-SFENGLHGWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7821

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +  +++   L      
Sbjct: 7822 REESNELKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQSKLNDTLRDKDQQ 7881

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7882 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7913


>gi|15676451|ref|NP_273590.1| hypothetical protein NMB0545 [Neisseria meningitidis MC58]
 gi|7225771|gb|AAF40974.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|325139802|gb|EGC62335.1| chromosome segregation protein SMC [Neisseria meningitidis CU385]
          Length = 1161

 Score = 39.0 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWRQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|254282002|ref|ZP_04956970.1| peptidase s1, chymotrypsin:pdz/dhr/glgf [gamma proteobacterium
           NOR51-B]
 gi|219678205|gb|EED34554.1| peptidase s1, chymotrypsin:pdz/dhr/glgf [gamma proteobacterium
           NOR51-B]
          Length = 368

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 12/95 (12%)

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472
           I+      +    R+   L  +     T      R L           G   I   + + 
Sbjct: 58  IYTAKLVSQGRTARLNDPLLRRFPEPSTRRQRVERSL-----------GSGVIMTADGHI 106

Query: 473 ITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKE 506
           IT    +A    I +   DG+ ANA V+   P  +
Sbjct: 107 ITNNHVIAEADAIQVLLADGRSANAAVVGTDPATD 141


>gi|149203783|ref|ZP_01880752.1| Putative trypsin-like serine protease [Roseovarius sp. TM1035]
 gi|149142900|gb|EDM30942.1| Putative trypsin-like serine protease [Roseovarius sp. TM1035]
          Length = 383

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAP 503
           L  G+      +   +T    +     + +   DG+A +A VI   P
Sbjct: 110 LGSGFII--SEDGKIVTNNHVVEGAETVTVKLADGRAFDATVIGSDP 154


>gi|330502844|ref|YP_004379713.1| condensin subunit Smc [Pseudomonas mendocina NK-01]
 gi|328917130|gb|AEB57961.1| condensin subunit Smc [Pseudomonas mendocina NK-01]
          Length = 1162

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 42/146 (28%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R  +  +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQGLNQQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
            S   +   Q+     L  +Q       + LR    E  E+  ++          I  + 
Sbjct: 245 GSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAEKARLE 330


>gi|255036177|ref|YP_003086798.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
           [Dyadobacter fermentans DSM 18053]
 gi|254948933|gb|ACT93633.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
           [Dyadobacter fermentans DSM 18053]
          Length = 471

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 43/372 (11%), Positives = 88/372 (23%), Gaps = 63/372 (16%)

Query: 92  ITTFPGSSKYQIIIESLIPSGSGTLLTAL--EKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149
           ++ F      QI    L     G    +   E RK  + +  L  DQ++         I+
Sbjct: 71  VSVFKNFGTAQIRQGDLEIEFVGARKESYRSESRKPAVEDGTLADDQNRRDFTINAMGIS 130

Query: 150 VITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209
           +     G ++         R  +       ++   + P  +  AI   + L         
Sbjct: 131 LNAGTFGELVDPFEGMSDLRKKIIRTPLDPEITFSDDPLRMMRAIRFASQLNFDIEPDTF 190

Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269
           D I+  +   SI  +   +DE                                       
Sbjct: 191 DAIVKMKDRISIVSMERISDE------------------------------------LNK 214

Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329
                 P           L A +   ++ L   +            ++ Q L       D
Sbjct: 215 IIRSKTPSYGFKLLYHAGLLAIIFPEMVELQGVEHIEGKGHKDNFYHTLQVLDNVAQVSD 274

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
            L       L  I     + F+        +              E    +  ++ + ++
Sbjct: 275 DLWLRWAAILHDIAKPATKKFDKRHGWSFHNH------------EEVGARMVPVIFRRMK 322

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI- 448
               EK   +  L  L  +    I      I       +  +   +      +     + 
Sbjct: 323 LPLNEKMRFVKKLVRLHLRP---IVLSKEEIT------DSAMRRLLVEAGEDIEALMNLC 373

Query: 449 ---LQSFAYKNT 457
              + S   +  
Sbjct: 374 RADITSKNPEKV 385


>gi|218246306|ref|YP_002371677.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801]
 gi|218166784|gb|ACK65521.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801]
          Length = 1226

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/151 (7%), Positives = 48/151 (31%), Gaps = 3/151 (1%)

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               L    Q L     +  +  +E ++ +  +           +    +       Q++
Sbjct: 348 QRNQLEQRQQELLTLTQQNQKSLQETQNTIAQLEHNLTHLTQETLELDNNTIPFLIQQRD 407

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R     +    +          +++++  ++      + T N        + +   ++  
Sbjct: 408 RTRQTLEMVRTQANAIAEASDAWVQEQSALSRKITAIQDTLNPQRTQQAKLNERRQQLNK 467

Query: 430 ILSH---KIKSCHTSVSITTRILQSFAYKNT 457
            + +   +++   T ++   + L + +++ T
Sbjct: 468 TIDNETQQLQEIETELNSQHQELNTLSHQAT 498


>gi|157137156|ref|XP_001663913.1| myotonin-protein kinase [Aedes aegypti]
 gi|108869781|gb|EAT34006.1| myotonin-protein kinase [Aedes aegypti]
          Length = 1608

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/173 (9%), Positives = 59/173 (34%), Gaps = 7/173 (4%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
               +   NL   L   + +    +     +  +A    ++ +S     +    ++    
Sbjct: 629 RDQLTEADNLREMLQIELQQAHT-QRTKSTNKRQAFSQWERQISEIIQWVSD-EKDARGY 686

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L+ +  +       + +   S  L HN          + Q ++++   +L+     + + 
Sbjct: 687 LQALATKMTEELEFLKH---SGSLNHNSSDKNWR-NRRSQKLDKMELLNLQSSLQNEIQA 742

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            A++     +T+  +      +++    I    ++++K     +    + L++
Sbjct: 743 KALISEELTRTRTDLVAAQKDLREARQ-ICESFNNELKRKEGQIKELQQRLET 794


>gi|194017300|ref|ZP_03055912.1| DNA polymerase III subunit alpha [Bacillus pumilus ATCC 7061]
 gi|194011168|gb|EDW20738.1| DNA polymerase III subunit alpha [Bacillus pumilus ATCC 7061]
          Length = 1111

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 20   LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFL 79
            LS ++K  V  ++  +  +  +   R  +    A+ +  D    ++ +++     K+  L
Sbjct: 944  LSSYIKRKV--SMGGLLTK--VKSIRTKNGQSMAFITFGDETGEMEGVVFPEQFRKLSPL 999

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIES---LIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136
             EEG    V G+I     SS  QII++    L   G+       E    ++ EE      
Sbjct: 1000 LEEGAMLYVEGRIDVRNDSS--QIIVQEAVLLEEMGT----QRKESVYIRVKEE-----N 1048

Query: 137  HKNPIPFIPKIIAVITSPTGAVI 159
            H   +    K +  + S    V 
Sbjct: 1049 HTQELLEQVKRVISMHSGEADVY 1071


>gi|149202134|ref|ZP_01879107.1| putative dna polymerase iii alpha chain protein [Roseovarius sp.
           TM1035]
 gi|149144232|gb|EDM32263.1| putative dna polymerase iii alpha chain protein [Roseovarius sp.
           TM1035]
          Length = 124

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 44  YRGIH--SSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKY 101
            R     + G  + +L+D    I+ +IW+   ++       G    V G++     S   
Sbjct: 36  VRQRPGTARGVVFVTLEDETGTINVVIWRKVFDRFRRAVIAGRMLRVTGRVE--RQSGVT 93

Query: 102 QIIIESLI 109
            ++ E + 
Sbjct: 94  HLVAEEIE 101


>gi|307197024|gb|EFN78396.1| Nuclear receptor corepressor 2 [Harpegnathos saltator]
          Length = 1436

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 59/205 (28%), Gaps = 15/205 (7%)

Query: 248  GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
            G E   +L D A    +           P      ++      +   +    +    + +
Sbjct: 821  GLEAFSSLVDVAVQQPSLPVP------HPHGHPAAAAAAAATKQEMRLQEHRMMQAEHRM 874

Query: 308  NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
             + +      D+ L+  R + +      +   ++      +     I + +   L    +
Sbjct: 875  AAAVAHHHQRDRDLAHLREKEEHRLHREKELQQLEHRLVVQQREKEIQQQEHARLAQQRE 934

Query: 368  KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            K+ QH+        ++  Q        ++ ++        Q + +  + H  +     R 
Sbjct: 935  KDMQHVE------HRLPMQQREKEMQHEQHRLVPSIGTVHQHREKELHRHQLVVAAAQRD 988

Query: 428  EFILSHKIKSCHTS---VSITTRIL 449
            +    H++         +    + L
Sbjct: 989  KEHQEHRLIVQQHREKEIQQQEQRL 1013



 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/206 (8%), Positives = 56/206 (27%), Gaps = 18/206 (8%)

Query: 262  LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
                     A +    +  L       +     ++ +  K      ++ L      D   
Sbjct: 880  HHHQRDRDLAHLREKEEHRLHREKELQQLEHRLVVQQREKEIQQQEHARLAQQREKDMQH 939

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL------------IHNIQKN 369
               R  + +  +E++H    ++        H    +    L             H +   
Sbjct: 940  VEHRLPMQQREKEMQHEQHRLVPSIGTVHQHREKELHRHQLVVAAAQRDKEHQEHRLIVQ 999

Query: 370  RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            +    E QQ  +++     R   ++++  +  +  +++Q + +        + +  +   
Sbjct: 1000 QHREKEIQQQEQRLTIHQQREKDIQRERDLVHMQQIQQQQQQQQQQQQQMQQHMQQQRME 1059

Query: 430  ILSHKI------KSCHTSVSITTRIL 449
                 I      +     +   +  L
Sbjct: 1060 AERRHIVQMYREQHQQQQIDRESSRL 1085


>gi|148693707|gb|EDL25654.1| mCG130210 [Mus musculus]
          Length = 1436

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   +E     E    +K          + S       +
Sbjct: 764 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 823

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
             R+H    ++ ++++ ++H + +   ++   A     R      +      +++   R 
Sbjct: 824 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 879

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 880 LESMRQEQDQQLEDLRRRHRDHERKLQDL 908


>gi|146307770|ref|YP_001188235.1| condensin subunit Smc [Pseudomonas mendocina ymp]
 gi|145575971|gb|ABP85503.1| condensin subunit Smc [Pseudomonas mendocina ymp]
          Length = 1162

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 42/146 (28%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R  +  +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQTLNQQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
            S   +   Q+     L  +Q       + LR    E  E+  ++          I  + 
Sbjct: 245 GSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAEKARLE 330


>gi|329944198|ref|ZP_08292457.1| trypsin [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530928|gb|EGF57784.1| trypsin [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 570

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            I D   + IT    +A+ ++I +   DG+   A      P  +
Sbjct: 281 VIFDKEGHIITNNHVVASASQIQVTLADGRVYEAETTGTDPATD 324


>gi|320095529|ref|ZP_08027194.1| hypothetical protein HMPREF9005_1806 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319977535|gb|EFW09213.1| hypothetical protein HMPREF9005_1806 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 649

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 464 SIQDTNNNFITQ----KRNLATKTRILINFFDGQA-NAIVIN 500
            + D   + +T        + +  +I +   DG+  +A V+ 
Sbjct: 349 VVYDAKGDIVTNYHVIAAAVQSGGKIQVTLADGRIYDAEVVG 390


>gi|294637118|ref|ZP_06715429.1| putative sensor/kinase in regulatory system [Edwardsiella tarda
           ATCC 23685]
 gi|291089689|gb|EFE22250.1| putative sensor/kinase in regulatory system [Edwardsiella tarda
           ATCC 23685]
          Length = 903

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/237 (10%), Positives = 62/237 (26%), Gaps = 34/237 (14%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              +          ++  +NN +  +   +          L  +  T      +L     
Sbjct: 382 LHKIAAMADRHHGKVQVSINNAMYEVQMVRSQQTPHSALFLIRNLDTEVLMSQKLKLAHE 441

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           E E NL           + +   +++      +    +    +   ++ +  +      L
Sbjct: 442 EYEKNLTARKTMTDNLSHELQAPLRAIS---RLSTALREAPNQAALLDDLWLESQHAQRL 498

Query: 394 EKKEKIAILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHK------------IKSCHT 440
             +  +      +    + R F LH HI  L+ R    +  K             +    
Sbjct: 499 IDEITLLTAVESQDWHPQTRQFRLHEHIDALLLRNLPAMRRKGLMLLGRVDTDPAQQFDG 558

Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK------TRILINFFD 491
            ++   R+L+       L   Y  +            +L          R+ +   D
Sbjct: 559 DIATLERVLEML-----LH--YAIVTTAYGKI-----SLTIGLDPQQPDRLHVQLSD 603


>gi|242010332|ref|XP_002425922.1| Nesprin-1, putative [Pediculus humanus corporis]
 gi|212509905|gb|EEB13184.1| Nesprin-1, putative [Pediculus humanus corporis]
          Length = 8614

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 61/195 (31%), Gaps = 11/195 (5%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS----C 323
           +   + + P        ++    R  N  I   + +   L+S  + L     + +     
Sbjct: 263 SLMQDRSFPNSLPEIKRMVAESNRFRNEEIPAKQREKQRLHSAFRDLTKHHDSYNDFDLE 322

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ----HILEKQQH 379
               +D + +     L+    +       +    K   L   + +  +     + E +Q 
Sbjct: 323 PELHIDNIEKNWTRLLKAHQDKDLAIQEELKRLEKLQRLADKVHREMKQVDTRLEELEQQ 382

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKIK 436
           IE    +  R   ++ K  +  L M     +  I Y+ + ++ L   R      L  +++
Sbjct: 383 IEVESTRLDRLHPVDAKNIVEQLQMNIRMVEENIQYILSDVQYLREARYPQAPELYKRVE 442

Query: 437 SCHTSVSITTRILQS 451
                      +L S
Sbjct: 443 RLRQRWESLQNLLHS 457


>gi|87302289|ref|ZP_01085114.1| Na/Pi-cotransporter family protein [Synechococcus sp. WH 5701]
 gi|87283214|gb|EAQ75170.1| Na/Pi-cotransporter family protein [Synechococcus sp. WH 5701]
          Length = 544

 Score = 39.0 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 15/148 (10%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
           + L     +          +L+ +  R            +S  L       RQ +L   +
Sbjct: 395 RRLDEPEAQRLLHLLHSLDHLQRLHERCEEEPERASTVRQSGALQR----ERQDLLAALE 450

Query: 379 HIEQIVKQHL-----RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            +E +V+        R      +     +  LR+     +      ++    R+E I   
Sbjct: 451 QLEPLVEAQQWGEVARRSQATGRSLHRRVKPLRQGVMAEVASGGVEVELASQRLEAI--R 508

Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRG 461
            ++     +   +  L++      L RG
Sbjct: 509 WLRRVSQHLGRISGHLEA----AALARG 532


>gi|220931624|ref|YP_002508532.1| DNA polymerase III, alpha subunit [Halothermothrix orenii H 168]
 gi|219992934|gb|ACL69537.1| DNA polymerase III, alpha subunit [Halothermothrix orenii H 168]
          Length = 1397

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 33  SHVCVRGEISGYRGI--HSSGHAY-FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89
             V ++GE+            + Y F++ D  S I    +    + ++         +V 
Sbjct: 204 QGVVIKGEVFNLEERVTRRGKYLYIFAVTDRSSSITCKFFIDDKSDLKSTLNNEDWVMVK 263

Query: 90  GKITTFPGSSKYQIIIESLI 109
           G++     S++  I+  S+ 
Sbjct: 264 GRVQFDTYSNEIVIMCNSIE 283


>gi|312962452|ref|ZP_07776943.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6]
 gi|311283379|gb|EFQ61969.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6]
          Length = 1162

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 41/146 (28%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  + +++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEERQLKAQLSALRWQALNDQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                I   Q+     L  +Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAIIGTQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330


>gi|299136388|ref|ZP_07029571.1| metal dependent phosphohydrolase [Acidobacterium sp. MP5ACTX8]
 gi|298600903|gb|EFI57058.1| metal dependent phosphohydrolase [Acidobacterium sp. MP5ACTX8]
          Length = 343

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 46  GIHSSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103
               SG  Y   +L D   + +A +W+     ++    EG    V G+++ +    K+QI
Sbjct: 31  RKAGSG-QYLALTLADKTGQFEARMWEDFAEAVQQC-TEGSYVKVQGQVSKY--QGKFQI 86

Query: 104 IIESLIPSGSGTL 116
            +  +  +    +
Sbjct: 87  TLNKMRLAADSEI 99


>gi|257887529|ref|ZP_05667182.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           1,141,733]
 gi|257823583|gb|EEV50515.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium
           1,141,733]
          Length = 765

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 40  EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96
           +++  + I ++  H  F L D  S++DA+ +       E      +   V+GK++   + 
Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544

Query: 97  GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154
           G  K Q+++      G           + + +  E+ L+     + + F+P+ I   T+ 
Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPESIQE-TAI 603

Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180
               +  I   I  R P  ++I    
Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629


>gi|326433435|gb|EGD79005.1| hypothetical protein PTSG_01976 [Salpingoeca sp. ATCC 50818]
          Length = 6230

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/129 (9%), Positives = 49/129 (37%), Gaps = 6/129 (4%)

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
              ++ R+  L +     LE +  +K      +  ++ ++      +  ++   + Q+  E
Sbjct: 5443 EEAKKRMAELEQAHLKRLEELEAQKQAQMKELSQKVDAEI----TEAQQKAEADLQKRRE 5498

Query: 382  QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            + ++   + +  E++   A L    E+ +  +      + ++ +R++     + ++    
Sbjct: 5499 ESMQAAEQRMREEQERAKAQLSP--EEFEKFMNKHRQQLSEVQSRLDKTQQAQRQALQER 5556

Query: 442  VSITTRILQ 450
            +       +
Sbjct: 5557 LKKQRERRR 5565


>gi|332160705|ref|YP_004297282.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664935|gb|ADZ41579.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
          Length = 1229

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/194 (9%), Positives = 62/194 (31%), Gaps = 8/194 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           A +A       Q     L  +    +  LI  + ++L  L   L       + ++ +L+ 
Sbjct: 336 ANLARQQHATNQHEQETLIEQKVVPLDNLIAQQQHSLMLLGTQLEQLRTKENQNKQQLEL 395

Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
             ++ +   + +         H  +   + +  +   Q  +  + ++Q    +   Q   
Sbjct: 396 NKQQFKLAHQRLQQLTEYTQQHAHHQHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQA 455

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448
            +    +++I  L+   +Q +  +   H+    +  ++  +   +        +    + 
Sbjct: 456 TLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515

Query: 449 ------LQSFAYKN 456
                 L + +   
Sbjct: 516 RPVRQQLAALSPLA 529


>gi|322815516|gb|EFZ24159.1| hypothetical protein TCSYLVIO_9712 [Trypanosoma cruzi]
          Length = 4214

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/192 (6%), Positives = 51/192 (26%), Gaps = 9/192 (4%)

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           + ++   +      P         + +      ++++ E     + +             
Sbjct: 310 SPFSAMAFVQYQPVPYRADLPTSRIELHVDRLRAVLSREEWAILLALWREA----RDGEE 365

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L +     +  +   D       + +++ + R  +     +   +       ++  R
Sbjct: 366 YDVLRHFRPVGAEKKRPTDNARAWWTYAIQVTLHRIRQVRERRVFVWEKY---KRLKAAR 422

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           +  +   +   +   + +    L  +EK  +  +  E     I      +    T +E  
Sbjct: 423 EEYMTLFKRDRRRQLKAIWLTELTMEEKTRLQDLEMELPMESIKIAR-RLAYHRTHLERE 481

Query: 431 LS-HKIKSCHTS 441
                ++     
Sbjct: 482 QRETLLERRRQQ 493


>gi|302541166|ref|ZP_07293508.1| single-strand binding protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458784|gb|EFL21877.1| single-strand binding protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 157

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT--TFP-----GSSKYQIIIESLIPS 111
           +   +W+     +    + G+  +V+G++T   +        S Y+I  E + PS
Sbjct: 55  LGVAVWRQQAEHVAESVQRGMRVIVVGRLTQRQYEATDGSKRSSYEIQAEEVAPS 109


>gi|289434854|ref|YP_003464726.1| DNA polymerase III, alpha subunit [Listeria seeligeri serovar 1/2b
            str. SLCC3954]
 gi|289171098|emb|CBH27640.1| DNA polymerase III, alpha subunit [Listeria seeligeri serovar 1/2b
            str. SLCC3954]
          Length = 1108

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 35   VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94
            V V  EI   R        + ++ D+   + A+++  +  K     ++G    +  K  T
Sbjct: 960  VYVH-EIKSIRTKKGETMCFLTISDDTKELSAVMFPESYRKYASFAQKGQILFLQVKADT 1018

Query: 95   FPGSSKYQIIIESLI 109
               + + Q+II    
Sbjct: 1019 --RNGELQLIINQAE 1031


>gi|323945296|gb|EGB41352.1| exonuclease SbcC [Escherichia coli H120]
          Length = 1047

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/161 (8%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +            +   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|322799789|gb|EFZ20986.1| hypothetical protein SINV_06721 [Solenopsis invicta]
          Length = 841

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 65/235 (27%), Gaps = 19/235 (8%)

Query: 214 LARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA-------DYAADLRAPT 266
              G  S ++      E    A  +S++     I       ++       D + D     
Sbjct: 618 CLEGCASKKESVIEVTEKSCEASCDSAMEDCDGISKNPLEVISLECGTEFDKSCDCDLKE 677

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                    P +    SS    +   +      +  K N            +        
Sbjct: 678 ERSECMTVCPPEPEKSSSCEGSQNDCSTSAESTVDEKPNERKRTRSMCEIRNPHHRRQLR 737

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           RL              +       +  I  +  + ++   +K+R       + +  ++  
Sbjct: 738 RL------------AKMRAISVVIDAAIAMVSRNDVLRRTKKSRHRDRIATKKLYNLLTT 785

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            L Y    K E+  +   L  +  +++       ++ I R++  L+ K+K     
Sbjct: 786 RLPYSKNRKVEEYLLKRSLGGKLNDKVLKRQRKQQEQIFRLKKQLTRKLKGKEAR 840


>gi|229553938|sp|Q5DU05|CE164_MOUSE RecName: Full=Centrosomal protein of 164 kDa; Short=Cep164
          Length = 1446

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   +E     E    +K          + S       +
Sbjct: 774 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 833

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
             R+H    ++ ++++ ++H + +   ++   A     R      +      +++   R 
Sbjct: 834 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 889

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 890 LESMRQEQDQQLEDLRRRHRDHERKLQDL 918


>gi|160420304|ref|NP_001074842.2| centrosomal protein of 164 kDa [Mus musculus]
          Length = 1333

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   +E     E    +K          + S       +
Sbjct: 661 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 720

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
             R+H    ++ ++++ ++H + +   ++   A     R      +      +++   R 
Sbjct: 721 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 776

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 777 LESMRQEQDQQLEDLRRRHRDHERKLQDL 805


>gi|281338611|gb|EFB14195.1| hypothetical protein PANDA_017490 [Ailuropoda melanoleuca]
          Length = 517

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 4/134 (2%)

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L   + +L          L+  +  K      + +R+  +  I  +Q+  +H+  +    
Sbjct: 247 LKQEQQKLKEAANSEHLTLQA-LTEKLLQSEEVTSRLPEE--IRKLQEELRHLETEALRA 303

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
           E+           E +EK   L    +  ++ +  + T   +    +E +L+  ++    
Sbjct: 304 EEDGVYKHSASLAELQEKSQGLDSRLQSVEDGVDAVQTASARHSENLEALLARSVEQ-EQ 362

Query: 441 SVSITTRILQSFAY 454
            ++     +     
Sbjct: 363 RLAALQERVAGLGP 376


>gi|157155185|ref|YP_001461575.1| exonuclease subunit SbcC [Escherichia coli E24377A]
 gi|157077215|gb|ABV16923.1| nuclease SbcCD, C subunit [Escherichia coli E24377A]
          Length = 1047

 Score = 39.0 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                  +   RQ I E    ++     +   +H       + ++         Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|262165480|ref|ZP_06033217.1| GGDEF family protein [Vibrio mimicus VM223]
 gi|262025196|gb|EEY43864.1| GGDEF family protein [Vibrio mimicus VM223]
          Length = 406

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
              + +       L    + L            + +       +  L + +Q +   R  
Sbjct: 64  NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 122

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           +  +        ++      +    + + +    L  +    RQ +        +     
Sbjct: 123 MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSA 176

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 E++EK A    L          +    ++L+  +   L  K+      +    R
Sbjct: 177 KEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANR 235

Query: 448 ILQSFA 453
            L++ +
Sbjct: 236 QLEALS 241


>gi|256020364|ref|ZP_05434229.1| exonuclease subunit SbcC [Shigella sp. D9]
 gi|332281541|ref|ZP_08393954.1| nuclease SbcCD [Shigella sp. D9]
 gi|332103893|gb|EGJ07239.1| nuclease SbcCD [Shigella sp. D9]
          Length = 1047

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                  +   RQ I E    ++     +   +H       + ++         Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|268316816|ref|YP_003290535.1| SMC domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262334350|gb|ACY48147.1| SMC domain protein [Rhodothermus marinus DSM 4252]
          Length = 1019

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/186 (8%), Positives = 55/186 (29%), Gaps = 16/186 (8%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           +   +  +      +   ++    T      A+      L     +   L +  +   + 
Sbjct: 449 RCRELEQQEARYRALQEELERLKETGQGKKAAIEALQARLQELERQQQDLQQRYDTFRQA 508

Query: 342 IIFRKYRHFNHI----------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                    + +              + + L   + + R+ +   +Q  E + +Q++  +
Sbjct: 509 EADVCPVCGSELGPEHREEVERHYEEQLEELARGLDEGRRRLAALEQEREALRQQYIARL 568

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS------CHTSVSIT 445
              K+ + A   + R + +          ++ + R    L  +++           +   
Sbjct: 569 SEAKRLEKAPEELARARAQLEELQRRNARREALARQLSALQTQLEQRAFAQEQRRRLEEL 628

Query: 446 TRILQS 451
            R L++
Sbjct: 629 HRKLEA 634



 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            L   R RL RL  EL+  LE ++ R+                   ++  R+     Q+ 
Sbjct: 273 RLQEERERLVRLEAELQD-LEQLLARREEIEQAHARERTLQEERRQLEAKREQYWGIQKQ 331

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK---KLITRIEFILSHK-- 434
           ++Q+  +  R      ++K+A++   +E  + ++  L T ++   ++  R++     +  
Sbjct: 332 LDQVQSELERQRSE-LEKKLALVRKEQEHVQRQLQELTTRLQERPRIAQRLKAAEQARQE 390

Query: 435 ---IKSCHTSVSITTRILQSFA 453
              ++      S     ++  +
Sbjct: 391 MARLEQQRQQRSALEEEIRHVS 412


>gi|304392185|ref|ZP_07374127.1| serine protease [Ahrensia sp. R2A130]
 gi|303296414|gb|EFL90772.1| serine protease [Ahrensia sp. R2A130]
          Length = 502

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 5/67 (7%)

Query: 454 YKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTK 510
            +    L  G+    D     IT    +A    I I+F DG    A VI   P  +    
Sbjct: 107 PRKVSSLGSGFVI--DPAGIIITNNHVIADADEIEIDFTDGTSLKAEVIGTDPKTDIAVL 164

Query: 511 KCQLHNN 517
           +      
Sbjct: 165 RVTPEKP 171


>gi|66044959|ref|YP_234800.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a]
 gi|63255666|gb|AAY36762.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a]
          Length = 1214

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/227 (11%), Positives = 59/227 (25%), Gaps = 24/227 (10%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D    L A            + E  Q      +    +   +          + L  L +
Sbjct: 213 DALKTLTAQASNIIPLAPELLAELEQRLSDAQQQLKAHQTQQRQLEIKQQWLTELHRLRD 272

Query: 317 ----SDQTLSCSRYRLDRLPRELEHNLEI-----IIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + L+ ++   D      +   ++        R  R              I   Q
Sbjct: 273 EQLAAQEALNSAQQAWDEHSGARQTLGQLERLGPQRHRFARRVTLNAQLDPLAEQIRQHQ 332

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLIT 425
           + +  + ++QQ +E    Q    +   ++   +   +L +    +N + +L   + K   
Sbjct: 333 RQQTSLHDQQQQLESRRTQAQTSLLEAQQAHSSAKPLLLQAFEAQNTLNHLAQELAKASD 392

Query: 426 RIEFILSHKIKSC-------------HTSVSITTRILQSFAYKNTLK 459
             +      I+                  +      LQ  +    L 
Sbjct: 393 LHQQSEQLCIQGKTSLQTLLDQQQQVAQRLERIAGQLQHSSELAPLA 439


>gi|317047571|ref|YP_004115219.1| chromosome segregation and condensation protein MukB
           domain-containing protein [Pantoea sp. At-9b]
 gi|316949188|gb|ADU68663.1| chromosome segregation and condensation protein MukB domain protein
           [Pantoea sp. At-9b]
          Length = 1488

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 48/165 (29%), Gaps = 6/165 (3%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                           +      L+    A    DQ L+        + R+    +   +
Sbjct: 442 EWQETFQAREEEATEQLLRLEQKLSVAEAAHSQFDQALALVTSIAGEVNRQDAWQVGREL 501

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            R   +  H   ++ S  L  N  + R     + + +              ++     L 
Sbjct: 502 LRDAANQRHHAEQLSSLRLRLNELEQRLREQNEAERLLA-----EFCKRQGQQYDADALE 556

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            L+ + + +I  L + +     R   ++  +++     +++ T  
Sbjct: 557 GLQRELEAQIEQLSSSVADAGER-RMLMRQELEQLRERITMLTAR 600


>gi|254671447|emb|CBA08972.1| putative chromosome partition protein [Neisseria meningitidis
           alpha153]
          Length = 1161

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|229526265|ref|ZP_04415669.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae bv.
           albensis VL426]
 gi|229336423|gb|EEO01441.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae bv.
           albensis VL426]
          Length = 570

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L          I  ++Q    KQQ + Q  +   + 
Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRILHSKQRHFRKQQRL-QAEELPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|74195257|dbj|BAE28356.1| unnamed protein product [Mus musculus]
          Length = 965

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/206 (7%), Positives = 54/206 (26%), Gaps = 9/206 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +  ++   ++           +        
Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815

Query: 372 HILEKQ----QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            +   +           +Q  +     ++E+        +Q +     +   + +  + +
Sbjct: 816 RMAMYKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESNM 875

Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453
             +   + + CH  V   T+ L++  
Sbjct: 876 SELQQLQNEKCHLLVEHETQKLKALD 901



 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D        A  + +            L+     +   + K         +K      Q 
Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           +     +  RL R+     +  +    R       R   D     + K ++ + +++  +
Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742

Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            ++ +  L+      K+++     + R     +       +++   R+   L  + +   
Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802

Query: 440 TSV 442
             +
Sbjct: 803 ARL 805


>gi|27380346|ref|NP_771875.1| serine protease [Bradyrhizobium japonicum USDA 110]
 gi|2623992|emb|CAA73938.1| degP [Bradyrhizobium japonicum]
 gi|27353510|dbj|BAC50500.1| serine protease [Bradyrhizobium japonicum USDA 110]
          Length = 371

 Score = 39.0 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 11/89 (12%)

Query: 435 IKSCHTSVSITTRILQSFAY--KNTLKRGYTSIQDTNNNFITQKRNLA-------TKTRI 485
           + +  +        + S +   +  L++G   ++  +   I     L          +R+
Sbjct: 282 LAAKESYQGALIAEIASGSPAEQAGLQKG-DIVKAVDGTPIRSASQLRNLIGLTPVGSRV 340

Query: 486 LINF-FDGQANAIVINKAPPKEQPTKKCQ 513
            + F  +G A +  +   P K  P ++  
Sbjct: 341 ELRFERNGAARSASVEVGPAKAVPVRRTA 369


>gi|322516623|ref|ZP_08069537.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           vestibularis ATCC 49124]
 gi|322124893|gb|EFX96317.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           vestibularis ATCC 49124]
          Length = 744

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 14  EYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HAYFSLKDNHSR 63
           E  +SELS   +K +       +++      +    ++  R +  +G H  F +K     
Sbjct: 461 ELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDS 520

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            D + +       EF   +G+E  V   +  + G +  Q+++E     G 
Sbjct: 521 FDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570


>gi|312862866|ref|ZP_07723106.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           vestibularis F0396]
 gi|311101726|gb|EFQ59929.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus
           vestibularis F0396]
          Length = 744

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 14  EYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HAYFSLKDNHSR 63
           E  +SELS   +K +       +++      +    ++  R +  +G H  F +K     
Sbjct: 461 ELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDS 520

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
            D + +       EF   +G+E  V   +  + G +  Q+++E     G 
Sbjct: 521 FDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570


>gi|198423307|ref|XP_002120215.1| PREDICTED: similar to viral A-type inclusion protein, putative [Ciona
            intestinalis]
          Length = 3720

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/185 (9%), Positives = 51/185 (27%), Gaps = 5/185 (2%)

Query: 268  TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
                  A+  +  +                   ++   T+  L   L  + +     + R
Sbjct: 3161 NNELRHALDHEAMVARQTQEELESERKTTAEAREHDRATVADLQSILEEAKKETVRVQRR 3220

Query: 328  LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
            ++    E E  L+     +      + +  +   +   + + +Q   + Q  ++    + 
Sbjct: 3221 VEDAEEEKEVALQRAREEQISISRRLEH--ERKSMEEALMREQQARKDLQFALDTEKHRK 3278

Query: 388  LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                   ++ +      LR Q + R+                    +++S    + +   
Sbjct: 3279 HEAQQRIRELEDQRRESLRRQEEERLMPRSPRESNES---LLAQRRQLESLRQRLQLEAT 3335

Query: 448  ILQSF 452
             LQ  
Sbjct: 3336 KLQKL 3340


>gi|195035865|ref|XP_001989392.1| GH11701 [Drosophila grimshawi]
 gi|193905392|gb|EDW04259.1| GH11701 [Drosophila grimshawi]
          Length = 1857

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/142 (8%), Positives = 44/142 (30%), Gaps = 5/142 (3%)

Query: 311  LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
             +     +  L  ++   D+   E EH   ++  ++       +    +      ++   
Sbjct: 1123 QQTKARLELELQETQLSRDKHKSEAEHKQMLLAEQEQLSIQQELALGDAGRQREQLEARC 1182

Query: 371  QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            Q +L++ + ++Q +            E + +   L E         +  +    +     
Sbjct: 1183 QALLQQNETLQQQLTHLHSSSTDSSAELLKLSQQLLEH-----QQANEQLATKSSEERAA 1237

Query: 431  LSHKIKSCHTSVSITTRILQSF 452
            L  ++++    +      ++  
Sbjct: 1238 LERQLQASQQRLDTLCAQVELL 1259


>gi|145591215|ref|YP_001153217.1| SMC domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282983|gb|ABP50565.1| SMC domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 702

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 51/176 (28%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
              +   +           + + I+   + L  L + L   +  L       +RLP    
Sbjct: 169 DVYNELRARRERIGGRAEELEKRIQPLRSRLEDLRRRLGEVEAKLRELEPYQNRLPEAER 228

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             LE+                + + L H   +  + + + ++ +E+I K       L   
Sbjct: 229 RYLELRDRHNVLLAEREQLERRLEELAHAALEAEKDVEQLEEELEKIRKAAQELKTLPTF 288

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             +   +    Q  + +  +   +K            +++     ++     L+  
Sbjct: 289 GDVEKEYFELRQVVSVVEKIPLEVKSYDPSRLEEARQRLEDSSRRLAQVKSRLELL 344


>gi|147920209|ref|YP_686024.1| hypothetical protein RCIX1429 [uncultured methanogenic archaeon
           RC-I]
 gi|110621420|emb|CAJ36698.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 421

 Score = 38.6 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 37  VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKI 92
           ++G+++        GH +F + D    +    ++      +I      G E  V G +
Sbjct: 268 LKGKVTQAPHTIEGGHVFFEIGDKTGVLKCSAFEPTKNFREIVRKLVPGDEVKVYGSV 325


>gi|47124946|gb|AAH70834.1| LOC431827 protein [Xenopus laevis]
          Length = 791

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/180 (9%), Positives = 50/180 (27%), Gaps = 13/180 (7%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-----RLDR 330
             +EH        +           K+         +   + ++     R      ++D 
Sbjct: 607 MEQEHALRRRDEAKRIKTEQERDHGKFLEQLKLKKKELKTHVEKLPRQQRRETMKVQMDD 666

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++     +  + R+  H    +  I  +       K R+ + +KQQ +          
Sbjct: 667 FAQKKHIEEQHFLSRQKEHLTLALRVIVLENRKEIYNKEREFLNKKQQLLRDREGVVWDL 726

Query: 391 IFLEKKEKIAI--------LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                +E+  +          + R +   +       +++   R+   L  + +     +
Sbjct: 727 EERHLQERHQLVKQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMMEQLKLRQQQEKARL 786


>gi|325202666|gb|ADY98120.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240149]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|291570151|dbj|BAI92423.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 688

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 70/244 (28%), Gaps = 32/244 (13%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            D        A    +       S+ ++   R      + I     ++++    L   + 
Sbjct: 350 CDRLKSWLNKAGMADIEETAIRMSTQVDDVDRQLGEFWQEIDQHQISISTNRAELSKIET 409

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            L   + +L   P E    L+  +         +   + S         N Q I    Q 
Sbjct: 410 RLDDIKQKLRHFPDEDIQQLQKRLDEIESRIGELNREMGS---------NYQQIETLTQE 460

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            E++ KQ  R    E K+  A      ++           + +++ R++     +++   
Sbjct: 461 CEKLSKQIDRQQMNEIKQLTA------QRRIAATEDAIARLSQVLERLDQQFRQQLEK-- 512

Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491
             V      +         + K  LK     ++ T+     +           + ++F  
Sbjct: 513 -RVQNIFSQISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565

Query: 492 GQAN 495
           G   
Sbjct: 566 GIIE 569


>gi|282165733|ref|NP_940885.2| RUN and FYVE domain-containing protein 4 [Homo sapiens]
 gi|215273875|sp|Q6ZNE9|RUFY4_HUMAN RecName: Full=RUN and FYVE domain-containing protein 4
          Length = 571

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 44/141 (31%), Gaps = 7/141 (4%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
             L     + D      +   E+ +  +      +  + +   L   ++K  +    ++Q
Sbjct: 375 WVLQGHATKEDSTVENPQVQTEVTLVARREEQAEVSLQDEIKSLRLGLRKAEEQAQRQEQ 434

Query: 379 HIE------QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
            +       Q +++ L     E+ E  A L   +++ + R       +      +   + 
Sbjct: 435 LLREQEGELQALREQLSRCQEERAELQAQLEQKQQEAERRDAMYQEELGGQRD-LVQAMK 493

Query: 433 HKIKSCHTSVSITTRILQSFA 453
            ++           + LQ  +
Sbjct: 494 RRVLELIQEKDRLWQRLQHLS 514


>gi|195037208|ref|XP_001990056.1| GH18447 [Drosophila grimshawi]
 gi|193894252|gb|EDV93118.1| GH18447 [Drosophila grimshawi]
          Length = 1982

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 50/173 (28%), Gaps = 6/173 (3%)

Query: 267  PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS---- 322
               A         +   S    +A +   +  +   +       ++   NS Q L     
Sbjct: 1415 TQTAVSCLQLHWRNYLLSKSQRQAYVELRLAAINVQRRYRAQLEMRRQRNSYQQLKLATI 1474

Query: 323  --CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                RYR     R+     +       +       ++         Q+ RQ  +  Q+  
Sbjct: 1475 QVQRRYRAQLAMRKQRQEYQNQRALIVQIQQRYRAKLAMKTARQVYQRQRQAAISIQRRW 1534

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
              +++  L+    ++    +I+   + +            ++ + ++  +  H
Sbjct: 1535 RALLQMRLQRQNYQRMRNSSIILQRKWRATLEAQRQRQIFRQTVAKVRLLQRH 1587


>gi|146418271|ref|XP_001485101.1| hypothetical protein PGUG_02830 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1432

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/187 (7%), Positives = 49/187 (26%), Gaps = 3/187 (1%)

Query: 268  TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
                     ++ H+    ++L+ +  +      +  +         +   +  L     R
Sbjct: 821  PQVLGQNPQLQNHIHLQTLSLQMQHQHASQLQKQNAVAVQGRNDVQVQTQNPQLQNQNVR 880

Query: 328  LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
            L  L  +L+     ++ +      +       D     +Q     +  +   ++ +  Q 
Sbjct: 881  LQNLSPQLQTQSPQMLHQNASQLQNQNFTPVQDRNDVQVQTQNPQLQNQNVRLQNLSPQL 940

Query: 388  LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                     +  + L                 I+          + ++++    +     
Sbjct: 941  QTQSPQMLHQNASQLQNQNFTPVQDRNVAQVQIQNSQ---LQSQNVRLQNQGPQLQSQNM 997

Query: 448  ILQSFAY 454
             LQ+ + 
Sbjct: 998  RLQNQSP 1004



 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/199 (9%), Positives = 57/199 (28%), Gaps = 7/199 (3%)

Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322
           + P      ++       LQ+         +  +      ++   N+ ++   +    L+
Sbjct: 697 QNPHLPVHNQVVQTRSPQLQNQKTTHGQSQSPQLPVQTSPQLQNQNTQVRNQNHHSPVLN 756

Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
                           L+    +   H +  +        +HN Q   Q+     Q+  Q
Sbjct: 757 PQVQTQSPQFPAQNPRLQNQSPQLPVH-DQRVQTQGPQLPVHNQQVQTQNSQLPVQNATQ 815

Query: 383 IVKQHLR------YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +  Q+ +       +      +   L M  +            ++          + +++
Sbjct: 816 VQTQNPQVLGQNPQLQNHIHLQTLSLQMQHQHASQLQKQNAVAVQGRNDVQVQTQNPQLQ 875

Query: 437 SCHTSVSITTRILQSFAYK 455
           + +  +   +  LQ+ + +
Sbjct: 876 NQNVRLQNLSPQLQTQSPQ 894


>gi|328554543|gb|AEB25035.1| DNA polymerase III DnaE [Bacillus amyloliquefaciens TA208]
 gi|328912947|gb|AEB64543.1| DNA polymerase III (alpha subunit) [Bacillus amyloliquefaciens LL3]
          Length = 1112

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 52   HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            H  + +L D    ++A+++     ++  L +EG      GK+       K Q I+ S
Sbjct: 972  HMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKME--ERQEKIQFIMSS 1026


>gi|325958692|ref|YP_004290158.1| phosphoesterase RecJ domain-containing protein [Methanobacterium
           sp. AL-21]
 gi|325330124|gb|ADZ09186.1| phosphoesterase RecJ domain protein [Methanobacterium sp. AL-21]
          Length = 724

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 13/133 (9%)

Query: 28  VESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85
           ++       V + GE+       +SG   F++ D  S   A  +     ++      G  
Sbjct: 206 IDKRFMGKTVRIVGEVVQI--QQTSGPTIFTITDETSTTWAAAFDEPGVRVYPHINTGDI 263

Query: 86  FLVIGKITTFPGSSKYQI---IIESLIPSGSGTLLTALEKRKKKLLE----EGLFSDQHK 138
             V+G++       K QI    I+SL    S  +   +++   +  E    E L   +  
Sbjct: 264 VEVLGEVNLHG--GKIQIESESIDSLKEEDSVEMRKLIDEAIDERAEPEETEFLIESETL 321

Query: 139 NPIPFIPKIIAVI 151
           N +  +    A  
Sbjct: 322 NKLRPMMHNAAKA 334


>gi|308174617|ref|YP_003921322.1| DNA polymerase III subunit alpha [Bacillus amyloliquefaciens DSM 7]
 gi|307607481|emb|CBI43852.1| DNA polymerase III (alpha subunit) [Bacillus amyloliquefaciens DSM 7]
          Length = 1115

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 52   HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            H  + +L D    ++A+++     ++  L +EG      GK+       K Q I+ S
Sbjct: 975  HMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKME--ERQEKIQFIMSS 1029


>gi|238764768|ref|ZP_04625711.1| hypothetical protein ykris0001_7360 [Yersinia kristensenii ATCC
           33638]
 gi|238697059|gb|EEP89833.1| hypothetical protein ykris0001_7360 [Yersinia kristensenii ATCC
           33638]
          Length = 455

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 54/201 (26%), Gaps = 4/201 (1%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313
           +   +AD   P      E                  R++  I  L +          +  
Sbjct: 92  ITAESADKTLPATGREPEFYSREVTAWVKGSDGQNYRISYDIDGLREVNQQGRADEGRHE 151

Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L      +             L  NL   + +    F  +     S  L+  +++    
Sbjct: 152 ILNIPIPMIWMGVLGGLFFSTFLAWNLTRPMRQLRAGFERVAQGDLSVRLLPVMRRRHDE 211

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + E  +  + + ++    +   +++ +  +         R+       ++    +E  L 
Sbjct: 212 LTEVARDFDSMAERLKELVSA-REQLLHDVSHELRSPLARLQLAIGLARQNPKNVENSLQ 270

Query: 433 HKIKSCHTSVSITTRILQSFA 453
             I+     +      L + +
Sbjct: 271 R-IEHESERLDKMIGELLALS 290


>gi|189046678|sp|B0KWR6|SFI1_CALJA RecName: Full=Protein SFI1 homolog
 gi|167045790|gb|ABZ10459.1| spindle assembly associated Sfi1 homolog isoform a (predicted)
           [Callithrix jacchus]
          Length = 1235

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/175 (8%), Positives = 46/175 (26%), Gaps = 12/175 (6%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           L        +++   +             +   L     R     R        +     
Sbjct: 714 LVQWREIASVQIYYRQQEDHAIWEARKVLARGCLRTWFQRWRDCSRRSAQQRLQLERAAQ 773

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAI 401
            H   ++    + +  H++   R+ +L +Q      Q + Q      R     ++++   
Sbjct: 774 HHHRQLLLEGLARWKTHHLGCVRKRLLHRQSTQLLAQRLSQTCFHQWRQQLAARRQEQQA 833

Query: 402 LHMLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
                       + +++           R +  +    ++    +      R+L+
Sbjct: 834 SVRALWFWAFSLQAKVWATWLAFVLERRRKKARMQQAFQAYQGQLLQEGAMRLLR 888


>gi|154499865|ref|ZP_02037903.1| hypothetical protein BACCAP_03522 [Bacteroides capillosus ATCC 29799]
 gi|150271463|gb|EDM98720.1| hypothetical protein BACCAP_03522 [Bacteroides capillosus ATCC 29799]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 33   SHVCVRGEISGYRG---IHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89
              V + G IS  +     ++S  AY +L+D+   ++ +++   L +     +E +  L  
Sbjct: 993  QKVNIAGVISSAKTKTTRNNSLMAYVTLEDDTGSMELLVFSRVLGESGSYIKENMPVLAT 1052

Query: 90   GKITTFPGSSKYQIIIESLIP 110
            G+I+     +  Q++++S+ P
Sbjct: 1053 GRISVRDEKAP-QLMVDSVRP 1072


>gi|29124562|gb|AAH48950.1| Sfi1 protein [Mus musculus]
          Length = 545

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 14/189 (7%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           T  +++ V  +E     +   +     +           L +  +      Q  +  R++
Sbjct: 20  TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 79

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           L +  +     L  ++    R   H +  I+  FL       RQ      Q + +     
Sbjct: 80  LGQAAQHHRWQL--LMEAMARWKAHHLGCIRKKFL------QRQAAQLLAQRLSRACFCQ 131

Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442
            R     +K++       L +     + +++           R +  L   +++    + 
Sbjct: 132 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 191

Query: 443 -SITTRILQ 450
               TR+L+
Sbjct: 192 QEGATRLLR 200


>gi|312958522|ref|ZP_07773042.1| transcriptional regulator [Pseudomonas fluorescens WH6]
 gi|311287065|gb|EFQ65626.1| transcriptional regulator [Pseudomonas fluorescens WH6]
          Length = 206

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 7/116 (6%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
           F    + +          +          H+      H R++F +       L  L +  
Sbjct: 54  FERFQHELTPLLDPPADAQLEPQDYWLFLHLIIERMAHYRFLFQDLSNLAGRLPKLAKGI 113

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460
           ++ +  L   +  L+ R++     ++ S   ++           L S  Y+  L R
Sbjct: 114 RHLLTALKRTLASLLARLKAA--GQLTSGTQALGQLVEQITLTLLFSLDYQRILDR 167


>gi|296204149|ref|XP_002749209.1| PREDICTED: A-kinase anchor protein 13, partial [Callithrix jacchus]
          Length = 2656

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 56/205 (27%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2315 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2374

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  R         + +       +++K RQ +   Q+  
Sbjct: 2375 LSTLQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2434

Query: 381  EQ----------------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             Q                   +    +  +++EK+       E+ +  +       +  +
Sbjct: 2435 AQYLEEKRRREREWEARERELREREALLAQREEKVQQGQQDLEKEREELQQKKGTYQYDL 2494

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +      L
Sbjct: 2495 ERL-RAAQKQLEREQEQLHREAERL 2518


>gi|227111944|ref|ZP_03825600.1| cell division protein MukB [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 1479

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/177 (8%), Positives = 46/177 (25%), Gaps = 5/177 (2%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +      L +L A   +  +   + K      +L  L         +  + ++  + + 
Sbjct: 424 ERARSLCQLPDLTADNADEWLDSYQAKEQEATEILLMLEQKLSVADAAHGQFEQAYQLVS 483

Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
                +   +        + +     +    +Q  R  + E +Q + +            
Sbjct: 484 KIAGAVNRNEAWQVARDLLRDSSSQRYQAERVQPLRMRLSELEQRLREQQDAERLLQDFN 543

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRI 448
           K+          E  +  +      +  L+         L  +++     +   T  
Sbjct: 544 KRNGQDYQPEELESLQQELDARIETLSSLVAEAGERRMALRQELEQTQQRIQKLTAR 600


>gi|327543395|gb|EGF29820.1| membrane-bound dehydrogenase domain protein [Rhodopirellula baltica
           WH47]
          Length = 1146

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 3/50 (6%)

Query: 449 LQSF-AYKNTLKRGYT--SIQDTNNNFITQKRNLATKTRILINFFDGQAN 495
           L+S       LK GY+   I   +   I+      T   I +   +G   
Sbjct: 888 LESLLDPSARLKEGYSTRKILTEDGEVISGISIGETDDAIRLRLANGTVR 937


>gi|325207588|gb|ADZ03040.1| chromosome segregation protein SMC [Neisseria meningitidis
           NZ-05/33]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|262037471|ref|ZP_06010931.1| ATP-dependent DNA helicase RecG [Leptotrichia goodfellowii F0264]
 gi|261748506|gb|EEY35885.1| ATP-dependent DNA helicase RecG [Leptotrichia goodfellowii F0264]
          Length = 691

 Score = 38.6 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 21  SYHLKHIVESNLSHVCVRGEISG-YRGIHSSGHAYFS--LKDNHSRIDAIIWKGTLNKIE 77
           S ++  I+      V ++G +         SG   F   L+D    I+ + +      I+
Sbjct: 52  SKNISEILPEEF--VAIKGTVVNAVNQYIKSGRTMFRAMLRDETGIIELVWF--NNRFIK 107

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQII---IESLIPSGSGTLLTALEKR 123
              + G E  V GK+     ++K+Q++    + +   G        E+ 
Sbjct: 108 NSIKIGDELQVYGKV---KRAAKFQMVNPEYKKIQSDGMIRGEARHEQI 153


>gi|257388242|ref|YP_003178015.1| nucleic acid binding OB-fold tRNA/helicase-type [Halomicrobium
           mukohataei DSM 12286]
 gi|257170549|gb|ACV48308.1| nucleic acid binding OB-fold tRNA/helicase-type [Halomicrobium
           mukohataei DSM 12286]
          Length = 731

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 4/71 (5%)

Query: 33  SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92
             V + GEI       +SG   F L+D    +D   +     +      E     + G +
Sbjct: 246 DDVRLEGEIVDV--RQTSGPTVFELRDETGTVDCAAFVEAGVRAYPDIVEEDIVRLDGDV 303

Query: 93  TTFPGSSKYQI 103
                  + Q+
Sbjct: 304 R--RRRGEIQV 312


>gi|289580301|ref|YP_003478767.1| phosphoesterase RecJ domain protein [Natrialba magadii ATCC 43099]
 gi|289529854|gb|ADD04205.1| phosphoesterase RecJ domain protein [Natrialba magadii ATCC 43099]
          Length = 637

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 10/119 (8%)

Query: 28  VESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86
           +E  +   + + GE+   +   + G   F + D    +    ++    +     E G   
Sbjct: 118 LEGTVGEQIHLEGEVVQVKQ--TGGPTIFHVTDESGVVPCAAFEEAGVRAYPSVEVGDVV 175

Query: 87  LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145
            V G           Q     +   G   L     +  +  LE+ L S    + +  + 
Sbjct: 176 RVTGTPE--HREGSVQ-----IEVDGLSKLEGETAEEARDRLEDALESRAEPHDVAPLI 227


>gi|195448250|ref|XP_002071576.1| GK10058 [Drosophila willistoni]
 gi|194167661|gb|EDW82562.1| GK10058 [Drosophila willistoni]
          Length = 1035

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 8/172 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +  V      +    N E     + +     K     +L     N  Q  +    R+ +
Sbjct: 653 GDRKVYDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 712

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++          RK      +++ +    L   + K +Q + +    +   +K H + 
Sbjct: 713 AQKQYIELEMRKFKRKRMI---LLHELDDQLLRDELSKKQQQLEQAHGML---LKHHEKT 766

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440
             LE +++ ++  +  EQ   +      + K  + R++  L  K  ++    
Sbjct: 767 QELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRLKKDLLRKHALELRQQ 818


>gi|317504798|ref|ZP_07962756.1| DNA helicase RecG [Prevotella salivae DSM 15606]
 gi|315664073|gb|EFV03782.1| DNA helicase RecG [Prevotella salivae DSM 15606]
          Length = 700

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 68/227 (29%), Gaps = 37/227 (16%)

Query: 12  HPEYSVSELSYHLKHIVESNLSHVCVRG------EISGYRGIHS-SGHAYFSLKDNHSRI 64
              Y++ EL+  +          V ++G      E S          H  FS  D H  +
Sbjct: 47  SKIYTIDELNGSI--------PFVQIKGKILSFEEFSNGTRRKRIVAH--FS--DGHGVV 94

Query: 65  DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL-------- 116
           D + ++GT   I        E++V GK T F     YQ     +  +    L        
Sbjct: 95  DLVWFRGT-QYIYKTYALNTEYIVFGKPTVFGSR--YQFAHPEIEKADELQLNEMGMQPY 151

Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176
            +  E+ K   +         KN I  +PK     T P    I+  L  IS     + I 
Sbjct: 152 YSTTERMKTNGITSRTIEKLTKNLISRLPKDAISETLP--VFIQRPLHLISREAAFKGIH 209

Query: 177 FPVKVQGDECPKEIANAILQLN-----TLKEGRTCPRPDIIILARGG 218
           +P  +   +  +                        +    +  R G
Sbjct: 210 YPKSLDELQHAQVRLKFEELFYVQLNILRYASDHRRKYRGYVFQRVG 256


>gi|309792329|ref|ZP_07686799.1| ATP-dependent DNA helicase RecG [Oscillochloris trichoides DG6]
 gi|308225644|gb|EFO79402.1| ATP-dependent DNA helicase RecG [Oscillochloris trichoides DG6]
          Length = 855

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 56  SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPG 97
           +L D    I A+ +      + +    G + ++ GK++ + G
Sbjct: 208 TLGDETGIIKAVFF--NQRWLMWDLSVGDQIVLSGKVSVYGG 247


>gi|307177319|gb|EFN66492.1| Serologically defined colon cancer antigen 8-like protein
           [Camponotus floridanus]
          Length = 841

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 53/190 (27%), Gaps = 9/190 (4%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
           A   KE   +            I          +  L   L    + L  +    +R   
Sbjct: 359 AARDKETEATQKAKRSMDDRQQIEFERSQSEMEIRRLKDELERQHEKLREAAQEANRRIT 418

Query: 334 ELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
           E    +E    ++   F      +   ++      +K R+ I E ++ + Q         
Sbjct: 419 EERQQIERRYNQQIEQFTADIASHWETANKSQLESEKQRREINELKRELSQKQATIDNLK 478

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
              + +   +   L +    +       +   +T        + +   + +       + 
Sbjct: 479 KELQNKISILQSDLNQALSEKDAAEQELLTSKLTTERN--ERQARQEQSRLQA-----EI 531

Query: 452 FAYKNTLKRG 461
            +YK  L+RG
Sbjct: 532 NSYKQRLERG 541


>gi|229591995|ref|YP_002874114.1| putative chromosome partition protein [Pseudomonas fluorescens
           SBW25]
 gi|229363861|emb|CAY51329.1| putative chromosome partition protein [Pseudomonas fluorescens
           SBW25]
          Length = 1162

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 41/146 (28%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  + +++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEERQLKAQLSALRWQALNDQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                I   Q+     L  +Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQRESIIGTQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330


>gi|170059597|ref|XP_001865432.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167878321|gb|EDS41704.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 409

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/250 (9%), Positives = 65/250 (26%), Gaps = 12/250 (4%)

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL------PRELEHN 338
              L                    +    L   D  L     RL                
Sbjct: 62  PQTLTQYNAASANEAGHAWCGRRRTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKT 121

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
            +  +  +        +R+K+       Q +R    + +   +    +        +  +
Sbjct: 122 QDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSR 181

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY-KNT 457
           +       +   +R+    + +K   +R++     ++K+  + +      L++      T
Sbjct: 182 LKTQDSRLKTQDSRLKTQDSRLKTQDSRLKT-QDSRLKTKDSRLKTQDSRLKTQDPRLKT 240

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517
                + ++  ++   TQ   L T+    +   D +             +   +      
Sbjct: 241 QD---SRLKTQDSRLKTQDSRLKTQDS-RLKTQDSRLKTRDSRLETRDSRLETRDSRLKT 296

Query: 518 KREKQGTQGE 527
           +  +  TQ  
Sbjct: 297 QDSRLKTQDS 306


>gi|148675163|gb|EDL07110.1| mCG15699, isoform CRA_d [Mus musculus]
          Length = 2761

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 59/205 (28%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2421 DCHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2480

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  +         + +       +++K RQ +   Q+  
Sbjct: 2481 LSMLQGVVLQQDSYIEDQKLVLTEKVLTRSASRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2540

Query: 381  EQIVKQHLRYI---------FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q +++  R             +++ K+A       + +  +      +++         
Sbjct: 2541 AQHLEEKRRREREWEAREQELRDREAKLAEREETVRRRQQDLERDREELQQKKGTYQCDL 2600

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +   T  L
Sbjct: 2601 ERL-RAAQKQLEREQEQLRRDTERL 2624


>gi|50949385|emb|CAH10698.1| hypothetical protein [Homo sapiens]
          Length = 408

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 175 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 234

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 235 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 294

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 295 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 343


>gi|281338777|gb|EFB14361.1| hypothetical protein PANDA_009980 [Ailuropoda melanoleuca]
          Length = 664

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/238 (9%), Positives = 71/238 (29%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D  ++ D R  +P  + E +   +   Q   
Sbjct: 212 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTSLETSWEEQLLEQQEH 271

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L       ++  + +
Sbjct: 272 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 326

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                  +   +          +  +     QQ + Q     L+      +  +    + 
Sbjct: 327 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 384

Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
            +    + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 385 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQAKLEEALRKLSEASYQQVDLER 441


>gi|116051087|ref|YP_790082.1| hypothetical protein PA14_24180 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115586308|gb|ABJ12323.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 479

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/220 (9%), Positives = 55/220 (25%), Gaps = 19/220 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
              +  A       +MA   + +         A       +  +        + +     
Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAAPAEPPRKQEDEQAARLAQLVKQQRQQL 218

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                    RL  L R+ E  L           + + + +    L   +++  +   E Q
Sbjct: 219 AALARQHEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 276

Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422
           Q + +  +Q  R      ++               +      L  +    +      +  
Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAVAVAGYKEQVSI 336

Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
               +     L  +++     +      L +   +  L+R
Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376


>gi|313890133|ref|ZP_07823768.1| DNA polymerase III, alpha subunit [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121494|gb|EFR44598.1| DNA polymerase III, alpha subunit [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 1036

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 24  LKHIVESNLSHVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPE 81
           +  +++ +   + V+ E        SSG   A+ ++ D   +ID  ++     +  +L  
Sbjct: 880 ITKLLKDSEHTILVQIEKVRIIRTKSSGQQMAFLTVTDTKKKIDVTVFPQEFLQFNYLLT 939

Query: 82  EGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           EG    + G++      ++ QI+ +++  +
Sbjct: 940 EGQMVFIQGRVK--ERDNRLQIVAQTITVA 967


>gi|325109305|ref|YP_004270373.1| metal dependent phosphohydrolase [Planctomyces brasiliensis DSM
           5305]
 gi|324969573|gb|ADY60351.1| metal dependent phosphohydrolase [Planctomyces brasiliensis DSM
           5305]
          Length = 323

 Score = 38.6 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 49  SSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
            +G  Y    L+D    +  ++W  + + +      G    V GK+  +  +   QII+ 
Sbjct: 30  RNGDTYLLADLRDKTGSLHGLLWNISEDSVA-HINAGDYVKVKGKVQLY--NGNLQIILT 86

Query: 107 SLIPSGSGTLLTALEKRKKKLLEEGLFSD 135
            +       +     +       E +FS 
Sbjct: 87  RIDAVNETQIDLNDFQAGSSQDVEKMFSR 115


>gi|189181672|ref|NP_083608.1| A kinase (PRKA) anchor protein 13 [Mus musculus]
          Length = 2776

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 59/205 (28%), Gaps = 17/205 (8%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D      +   E              +           L+         +++++ +  + 
Sbjct: 2436 DCHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2495

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            LS  +  + +    +E    ++  +         + +       +++K RQ +   Q+  
Sbjct: 2496 LSMLQGVVLQQDSYIEDQKLVLTEKVLTRSASRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2555

Query: 381  EQIVKQHLRYI---------FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424
             Q +++  R             +++ K+A       + +  +      +++         
Sbjct: 2556 AQHLEEKRRREREWEAREQELRDREAKLAEREETVRRRQQDLERDREELQQKKGTYQCDL 2615

Query: 425  TRIEFILSHKIKSCHTSVSITTRIL 449
             R+      +++     +   T  L
Sbjct: 2616 ERL-RAAQKQLEREQEQLRRDTERL 2639


>gi|170079221|ref|YP_001735859.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. PCC
           7002]
 gi|169886890|gb|ACB00604.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. PCC
           7002]
          Length = 1007

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 12/208 (5%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
              L            V  K   Q S    E       ++     +   N  L AL    
Sbjct: 498 TCPLCEQNLDHDHHQNVMAKTQAQYSATEAEILTFQNELKRCDQLLRDYNQELTALDQVR 557

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
                   ++ RL + +E N + +     +    ++N  ++  L    +  R  + E Q 
Sbjct: 558 SRYESYDQQMIRLEQAIETN-QALEKELKQVEQELLNLERALRLEAYAEDLRAELAEVQH 616

Query: 379 HIEQIVKQHLRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
            +E +     +     + EK      +  +   Q + R+  L   + +    +E    H+
Sbjct: 617 QLETLKYDESQLAIARETEKEYRWAELKEVELNQARQRLDTLQRELPQQEAALET-QRHQ 675

Query: 435 IKSCHT------SVSITTRILQSFAYKN 456
           +            ++     L +  Y  
Sbjct: 676 LDQNRQTSPWQVHLTQLQEQLNALNYDR 703


>gi|332263926|ref|XP_003281001.1| PREDICTED: 5-azacytidine-induced protein 1, partial [Nomascus
           leucogenys]
          Length = 895

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/170 (5%), Positives = 44/170 (25%), Gaps = 8/170 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            + +       +   +   +   +  + L  +++         + L ++          +
Sbjct: 623 RHKQEVRRLKSLHEAELLQSDERASQRCLRQAEELREQLEREKEALGQQERERARQRFQQ 682

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                       +   L    Q+    + E+++ + Q   +    +   +++       L
Sbjct: 683 HLEQ--------EQWALQQQRQRLYSEVAEERERLGQQAARQRAELEELRQQLEESSSAL 734

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
               K          ++        L  +++    +        +  + +
Sbjct: 735 TRTLKAEFEKGREEQERRHQMELKALKQQLELERQAWEAGCARKERVSPQ 784


>gi|299769612|ref|YP_003731638.1| ABC transporter family protein [Acinetobacter sp. DR1]
 gi|298699700|gb|ADI90265.1| ABC transporter family protein [Acinetobacter sp. DR1]
          Length = 528

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/336 (9%), Positives = 104/336 (30%), Gaps = 18/336 (5%)

Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181
           +   +   + +F    +         ++ +    G     ++Q ++       I+   ++
Sbjct: 10  QLSLEFPSKDMF---QQLNFSLESHQVSALIGRNGQGKSLLMQMLNQTLKSDSILTSGQI 66

Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241
                       + +L            D+    +     + + +F+D  ++    +  I
Sbjct: 67  -SWHVKHAYLPQLHRLAAQTIAEALDILDVYHAFKRV--EQGVANFDDYDLLEGKWDLPI 123

Query: 242 PIISAIGHETDWTLADY-AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
              + +      T  D+   +L     T  A   + +K      L      L+    + +
Sbjct: 124 LWNNLLESAGLPTDLDFPVKNLSEGQKTKLALSCLFLKSDHYLLLDEPSNHLDQESRKWL 183

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
              +    +    + +    L+     +D +    EH L        + ++     +   
Sbjct: 184 IDHLRKHPAGALIISHDRSLLNE----VDHIYHLNEHGLHHTTGNYEKFYDQYQTHVA-- 237

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            L  ++Q+ ++ +   +Q   +++ +  +      K + +       Q K  + +     
Sbjct: 238 ALEQSVQQGQRDVKHMKQKQHEVLMKAHKRERAGNKLRESNS-----QAKILLDFKKEQA 292

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            + I  I+     +I +    ++   + L++   + 
Sbjct: 293 GQSIAAIQSQHQRQISNSQNDLTDKKKRLETVKPQQ 328


>gi|254671825|emb|CBA03959.1| putative chromosome partition protein [Neisseria meningitidis
           alpha275]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|254515681|ref|ZP_05127741.1| ggdef family protein [gamma proteobacterium NOR5-3]
 gi|219675403|gb|EED31769.1| ggdef family protein [gamma proteobacterium NOR5-3]
          Length = 378

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 22/211 (10%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H     L +   D  +      AE+A      +   L +          R+++       
Sbjct: 21  HHKLVGLINELGDAISSDSAYTAEIAS-----IIQQLFSYTQYHFTEEERMMRAAKVDER 75

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                L    + L   +Y    +  +                  + + +    L  +   
Sbjct: 76  HQEAHLNRHKEFLEEVQYIHANMATDPNAA--------SHLLEFLTHWLAYHILGSDQNL 127

Query: 369 NRQ-HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            RQ   +EK     Q  +   R         +A L+ L +Q   R   L         R+
Sbjct: 128 ARQIKAIEKGASPHQAFEDEERRANDATGPLLAALNALFQQVSARNRELM--------RL 179

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
              L  K+     +++     L   A+ +TL
Sbjct: 180 NQSLEAKVSERTRALTELNTQLDELAHTDTL 210


>gi|121634340|ref|YP_974585.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18]
 gi|120866046|emb|CAM09784.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18]
 gi|325131781|gb|EGC54482.1| chromosome segregation protein SMC [Neisseria meningitidis M6190]
 gi|325137671|gb|EGC60248.1| chromosome segregation protein SMC [Neisseria meningitidis ES14902]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|109108807|ref|XP_001094990.1| PREDICTED: centrosomal protein of 164 kDa isoform 2 [Macaca
           mulatta]
          Length = 1457

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 53/149 (35%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H       + S       +
Sbjct: 781 AKHQEVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHMAEYEQELSSLL----RE 836

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 837 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 896

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 897 LETVRQEQHKRLEDLRRRHREQERKLQDL 925


>gi|284807020|dbj|BAI67715.1| nuclear matrix constituent protein 1 [Apium graveolens]
          Length = 1171

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 56/162 (34%), Gaps = 25/162 (15%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
             L ++D  L+    +   +      + E+           +    + + L  NI + R+
Sbjct: 177 SKLHSADAKLAELSRKSSDIE---RKSHELEARESALRRERLSLNAERESLTDNISRQRE 233

Query: 372 HILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            + E ++ +++  ++   +R +  +++E+      L +Q +  +      I+ +I  ++ 
Sbjct: 234 DLREWERKLQEDEERLAEVRRLLNQREERANENDRLYQQKQTELEGEQKKIEIIIASLKN 293

Query: 430 --------------------ILSHKIKSCHTSVSITTRILQS 451
                                + H ++     ++     L +
Sbjct: 294 KEDDISSRIEKLNIKEKEADAMKHSLEIKERDLNELEEKLNA 335


>gi|194666702|ref|XP_001788159.1| PREDICTED: PTPRF interacting protein alpha 2, partial [Bos taurus]
          Length = 975

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|195054188|ref|XP_001994008.1| GH17953 [Drosophila grimshawi]
 gi|193895878|gb|EDV94744.1| GH17953 [Drosophila grimshawi]
          Length = 4784

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/181 (7%), Positives = 49/181 (27%), Gaps = 13/181 (7%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +       ++L    + + +  +          +  + +     S  R +      
Sbjct: 633 LHIDRIMTAKQSMDLNEVESRVWLNYMDQICEQFRGEIPHIKHPKMDFSDLRQKYRINHT 692

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV--------- 384
               +   ++  K +  + + + +     +       +   ++Q+  EQ++         
Sbjct: 693 HAPPDFSKLLQTKPKAKSPMQDAVDVPTTVQRRSVLEEERAKRQRRHEQLLNSGGGNLAA 752

Query: 385 ----KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
                            + A     R   K R      +I++   R++ I  +++     
Sbjct: 753 NSATAAAASGAASSNNVQQAQSDTPRRSKKRRQADKTANIEERQQRLQEIEENRLDRMSR 812

Query: 441 S 441
            
Sbjct: 813 R 813


>gi|68537127|ref|YP_251832.1| putative cell surface protein [Corynebacterium jeikeium K411]
 gi|68264726|emb|CAI38214.1| putative cell surface protein [Corynebacterium jeikeium K411]
          Length = 2033

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 467  DTNNNFITQK-RNLATKTRILINF--FDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522
            D N N +    ++     +I +     DG + + +V+    P    T+K    ++  +  
Sbjct: 1776 DENGNLVVDIDKDAKPGDKITVVVKDKDGNEIDRVVVEVEKPDAPETEKPDWKDDSGKPG 1835

Query: 523  GT 524
              
Sbjct: 1836 DK 1837


>gi|198451718|ref|XP_001358495.2| GA14453 [Drosophila pseudoobscura pseudoobscura]
 gi|198131613|gb|EAL27634.2| GA14453 [Drosophila pseudoobscura pseudoobscura]
          Length = 822

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/187 (5%), Positives = 41/187 (21%), Gaps = 4/187 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                 P     + +P     Q    ++    +  +  L  +        LK+    +  
Sbjct: 540 HAATKMPPLPTAIPMPTTPRTQHQHSSVNTPKDAAMEELSTFAQLKAYVELKSESKPEHL 599

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L         L       + ++           +  +    L    +     +    Q  
Sbjct: 600 LDQRLEGQQTLSSSHPGAMLLLACVLVVVLLAGLAHVYRCELPWQRRGRAGQMRPHHQRQ 659

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
                    ++  +            +    +  +         + +  + + +++    
Sbjct: 660 FNESDDAHSFLNYQGSAGSTADPARLQ----KWHHSTRREAPYSSPLHNLQARELQREQN 715

Query: 441 SVSITTR 447
            +    +
Sbjct: 716 RLQRCQQ 722


>gi|239828024|ref|YP_002950648.1| DNA polymerase III subunit alpha [Geobacillus sp. WCH70]
 gi|239808317|gb|ACS25382.1| DNA polymerase III, alpha subunit [Geobacillus sp. WCH70]
          Length = 1104

 Score = 38.6 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 26/136 (19%)

Query: 17   VSELSYHLKHIVESNLS---HVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKG 71
            V  +   ++    ++      V +   +   +    +G   A+F++ D    +D + +  
Sbjct: 936  VRSVMSVIREK--TDFPVKVGVYI---VEERKTRTKTGKEMAFFTVSDESGEMDVVAFPD 990

Query: 72   TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE------------SLIPS--GSGTLL 117
               +   + ++G   L+ GK+       K Q++I              + P    SG L 
Sbjct: 991  VYRRYSSVLKKGTVRLLEGKVEV--RKGKAQLVIRKADVPAMEALYVKIRPEHIASGKLF 1048

Query: 118  TALEKRKKKLLEEGLF 133
            T  E  KK   +  +F
Sbjct: 1049 TLKELLKKYHGKTPVF 1064


>gi|328783366|ref|XP_392064.4| PREDICTED: hypothetical protein LOC408519 [Apis mellifera]
          Length = 1602

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 54/185 (29%), Gaps = 11/185 (5%)

Query: 276  PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPR 333
               +     +   +      +++ ++ K     S          D+     R  L+R   
Sbjct: 1128 ENGKVYDDQIFRKQELRELKMLQKMEQKQFQDLSQKAQFNKDQQDKRFEQERQLLERNAE 1187

Query: 334  ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                 L     ++                     +  + + + ++ ++Q +K   + + L
Sbjct: 1188 TDLETLARQQRQQIERAEAQQEADLRLASKKIRSEQERELKQFREGLKQELKLLKQEVDL 1247

Query: 394  EKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
              K+K      +R         E+ K+ +  L+   + L+ R+      KI         
Sbjct: 1248 MPKDKRKSAFKIRKEKLEAEHEEREKHFLDKLNESHELLLRRLSDSHREKIALMERQFLQ 1307

Query: 445  TTRIL 449
              + L
Sbjct: 1308 QKQQL 1312


>gi|195576698|ref|XP_002078212.1| GD23326 [Drosophila simulans]
 gi|194190221|gb|EDX03797.1| GD23326 [Drosophila simulans]
          Length = 2547

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 56/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 1168 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 1227

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 1228 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 1286

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      +     ++   L      
Sbjct: 1287 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVGQQAKLNDTLRDKEQQ 1346

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 1347 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 1378


>gi|171914180|ref|ZP_02929650.1| Chromosome segregation protein SMC [Verrucomicrobium spinosum DSM
           4136]
          Length = 1328

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 51/175 (29%), Gaps = 11/175 (6%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
           N    ++     L        +                      +P   +  +E    R+
Sbjct: 327 NNRDMVDRQQRELAAADEQFSSIRNAIESRQYALEEHQITHNAIIPERQKLEMERRTLRE 386

Query: 347 YRHF---NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI--FLEKKEKIAI 401
                         K+  L + +  +RQ         +  V+        F   + +I  
Sbjct: 387 TFRRLEGEAATADAKAQSLTNQMATDRQRHEALAHDKQSAVQAREASQVEFDHLQRQIEE 446

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFI------LSHKIKSCHTSVSITTRILQ 450
           L  +R + ++++  L   I++   + +        L  ++    + + +  +IL+
Sbjct: 447 LETVRAELEHKLKELTNTIQEQRRQRDAASEELNNLQRQLTQRRSRLEVLQQILE 501


>gi|118086930|ref|XP_419187.2| PREDICTED: similar to dystrobrevin alpha [Gallus gallus]
          Length = 742

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 46/155 (29%), Gaps = 10/155 (6%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            N  + L  +    +       +   +                   F I   ++ RQ I 
Sbjct: 417 SNPARVLDSASRLDEEHKLIARYAARLAAETSSSQQAQQRGAADISFTIDANKQQRQLIA 476

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432
           E +    +I+++  R     ++         ++       +  L     +L  R+  +  
Sbjct: 477 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 536

Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
            + +     +    ++L++        +  +T+ R
Sbjct: 537 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 570


>gi|148652279|ref|YP_001279372.1| SMC domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148571363|gb|ABQ93422.1| condensin subunit Smc [Psychrobacter sp. PRwf-1]
          Length = 1280

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 49/152 (32%), Gaps = 1/152 (0%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +Y+     +  K L   +          +   ++ +   +      Y+     ++ +K  
Sbjct: 175 RYQARREETQKKLLRTRENLERLQDIEAELSRQKKKLAKQAESATHYQQLQQQLSEVKEQ 234

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                + + +   ++ +   EQ+ K        +   K  +  +     + +        
Sbjct: 235 LGTQQLYQAKAAQMQHKAEQEQLTKSLEAQQAQDSMLKQKLAKVSARLAEEQWLKDEARD 294

Query: 421 KKLITRIEFI-LSHKIKSCHTSVSITTRILQS 451
                 ++   + H++K  H+S+S     L++
Sbjct: 295 SLHQQDLQRQQVEHQLKELHSSLSQLEGKLRA 326


>gi|261417552|ref|YP_003251234.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC61]
 gi|297528427|ref|YP_003669702.1| RNA-binding S4 domain protein [Geobacillus sp. C56-T3]
 gi|319765209|ref|YP_004130710.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC52]
 gi|261374009|gb|ACX76752.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC61]
 gi|297251679|gb|ADI25125.1| RNA-binding S4 domain protein [Geobacillus sp. C56-T3]
 gi|317110075|gb|ADU92567.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC52]
          Length = 93

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 17/62 (27%), Gaps = 3/62 (4%)

Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVIN-KAPPKEQPTKKCQL--HNNKREKQGTQ 525
           N +      ++     + I F   +    V + K   K++            +      Q
Sbjct: 31  NGHVAKASSDVKVGDELTIQFGQKRVTVKVTDLKETTKKEEATGLYELIREERTTPAPEQ 90

Query: 526 GE 527
            +
Sbjct: 91  DD 92


>gi|322372785|ref|ZP_08047321.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus sp.
           C150]
 gi|321277827|gb|EFX54896.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus sp.
           C150]
          Length = 736

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 41  ISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           ++  R +  +G H  F +K   +  D + +       EF   +G+E  V   +  + G +
Sbjct: 489 VTQARTMGQNGAHLKFKVKQGKASFDVVAFNKGDLLQEFQQAQGLELAVTLSVNVWNGQT 548

Query: 100 KYQIIIESLIPSGS 113
             Q+++E     G 
Sbjct: 549 TLQLMLEDARVEGI 562


>gi|195352722|ref|XP_002042860.1| GM11528 [Drosophila sechellia]
 gi|194126907|gb|EDW48950.1| GM11528 [Drosophila sechellia]
          Length = 347

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/206 (9%), Positives = 63/206 (30%), Gaps = 3/206 (1%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN-LEARLNNIIIRLIKYKINTLN 308
           + D +++D + +L   +P    E+A P  +    ++   L+     +     +      +
Sbjct: 24  DIDGSVSDGSEELEEQSPERIEEIAWPQIKREIGAMNRTLDEMQAQLANDFHERDGGRPD 83

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              +    + + L     R   +    E  L  + +   R    + + ++   L      
Sbjct: 84  WEEEHEAAAAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLGDLVRCSELGRARIT 143

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITR 426
               + ++Q       +Q    +      K        ++ +    ++     + K+   
Sbjct: 144 ALDRVFQRQTKELIACRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRH 203

Query: 427 IEFILSHKIKSCHTSVSITTRILQSF 452
           ++      ++   + +       Q+ 
Sbjct: 204 LKEAYKKILERTQSRLEYAEVKRQAL 229


>gi|83816971|ref|NP_001033043.1| dixin isoform a [Homo sapiens]
 gi|147641721|sp|Q155Q3|DIXC1_HUMAN RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1;
           Short=Coiled-coil-DIX1; AltName: Full=DIX
           domain-containing protein 1
          Length = 683

 Score = 38.6 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 452 SYHQVDLER 460


>gi|219112815|ref|XP_002185991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582841|gb|ACI65461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1078

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/172 (9%), Positives = 53/172 (30%), Gaps = 3/172 (1%)

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
             Q  +  LE R   +   L + +   +     A    +Q  +  + ++     +    L
Sbjct: 579 KDQHQIDVLEHRCRVLEQSLKQAEDRVIILQQDARQRFEQDENKQQSQMMAFSEKEARLL 638

Query: 340 EIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
           +            +     ++   L H+  + R+   + +Q + Q+++         ++E
Sbjct: 639 QAAAEDHEHEMRQLRHAQELQVQSLQHSFAEEREAADKARQQLHQLLEDANARADEAERE 698

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                    +    +       +++   ++   L  ++     S+      L
Sbjct: 699 SYETKQYQEKSRTQQEQQEVRALRRAEDKLVQAL-AQLDERDESIRTLKTSL 749


>gi|195401098|ref|XP_002059151.1| GJ16188 [Drosophila virilis]
 gi|194156025|gb|EDW71209.1| GJ16188 [Drosophila virilis]
          Length = 1916

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 42/138 (30%), Gaps = 5/138 (3%)

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
               ++ L   +  LD+L  E E     +   +       +    +      ++   Q +L
Sbjct: 1161 ARLERELKDLQQSLDKLRAEAEQKQTQLGELEQLAIERDLALGDAGRQREQLEARCQALL 1220

Query: 375  EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
            ++ + ++Q +            E + +   L E         +  +    +     L  +
Sbjct: 1221 QQNETLQQQLSNLHSSSTDSNAELLKLSQQLLEH-----QQANEQLATKSSEERAALERQ 1275

Query: 435  IKSCHTSVSITTRILQSF 452
            +++    +      ++  
Sbjct: 1276 LQASQQRLDALCGQVELL 1293


>gi|194432634|ref|ZP_03064920.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012]
 gi|194419195|gb|EDX35278.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012]
 gi|332085911|gb|EGI91075.1| exonuclease sbcC [Shigella dysenteriae 155-74]
          Length = 1047

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRLDELQQEASLRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399


>gi|104780877|ref|YP_607375.1| exonuclease SbcC [Pseudomonas entomophila L48]
 gi|95109864|emb|CAK14569.1| exonuclease SbcC [Pseudomonas entomophila L48]
          Length = 1214

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 55/165 (33%), Gaps = 7/165 (4%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL-EIIIFRKYRHFNHI 353
            + + ++   +      + L    Q L+    +L++   +L   L + I+        + 
Sbjct: 733 RLNQQLQAANDAQQQAQRHLEQQHQALATDEQQLEQSLIDLASVLPQDILQALRDDPANA 792

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
              +     +   Q +++   +++Q   Q     LR     ++  +  L         + 
Sbjct: 793 FLGLDQQIALRRQQLDQRKDEQEEQQARQGQLDKLRDQQQNRQHNLQQLQHKLTALDEQH 852

Query: 414 FYLHTHIKKL------ITRIEFILSHKIKSCHTSVSITTRILQSF 452
               T + +L          +  +  +++    + + T + LQ+ 
Sbjct: 853 QLARTTLGELLGEQPTAEAWQKHMDTQLEQARATEADTAQHLQAL 897


>gi|146282218|ref|YP_001172371.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri
           A1501]
 gi|145570423|gb|ABP79529.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri
           A1501]
          Length = 1162

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQSAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L  +Q       + LR    E  E+   +          I  + 
Sbjct: 245 GQREQVIGDQEVAFEALVAEQRSADASIERLRDGHHELSERFNQVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAEQARLE 330


>gi|42558942|sp|O75334|LIPA2_HUMAN RecName: Full=Liprin-alpha-2; AltName: Full=Protein tyrosine
           phosphatase receptor type f polypeptide-interacting
           protein alpha-2; Short=PTPRF-interacting protein alpha-2
 gi|3309533|gb|AAC26100.1| liprin-alpha2 [Homo sapiens]
          Length = 1257

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 34/353 (9%), Positives = 101/353 (28%), Gaps = 23/353 (6%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L        +  +   
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQL--------QERLELA 392

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                  + + ++   +      R   L K +     +++ +R++  + +EK   L   R
Sbjct: 393 EEKLQQTMRKAETLPEVEAELAQRIAALTKAEETHGNIEERMRHLEGQLEEKNQELQRAR 452

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           ++            ++   R+   +   +   +  +       + +   KN L
Sbjct: 453 QR--------EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|320161646|ref|YP_004174871.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1]
 gi|319995500|dbj|BAJ64271.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1]
          Length = 1202

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 11/184 (5%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           E  Q +L++   R  N + R+ +     L+          + L   +   +RL    +  
Sbjct: 309 EERQRALVDQRQRTQNDLERMAEENQARLDKRQTLEEEIQRLLEEQKEAEERLRDARKAL 368

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK-- 396
                 R          R           + R H  E    IE +           K+  
Sbjct: 369 EARQAERSKLEAQLRDARRLQTQSETRQVQVRAHHTELLHRIENLQSSVQSLQQALKREQ 428

Query: 397 ---EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK------IKSCHTSVSITTR 447
              ++    H   E+ + +       +++ +   +  L  +      ++     +     
Sbjct: 429 EDLQRAQSRHAQWERNRTQAEDTWKKLEETLRTHQQTLRTREEERRALQEERNRLEAEAT 488

Query: 448 ILQS 451
            L++
Sbjct: 489 RLRA 492


>gi|313668974|ref|YP_004049258.1| hypothetical protein NLA_16940 [Neisseria lactamica ST-640]
 gi|313006436|emb|CBN87899.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 1161

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R                Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343


>gi|301763663|ref|XP_002917261.1| PREDICTED: rho-guanine nucleotide exchange factor-like [Ailuropoda
            melanoleuca]
          Length = 1723

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/136 (8%), Positives = 36/136 (26%), Gaps = 8/136 (5%)

Query: 317  SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL-- 374
                L   +                   +                L H  Q+ ++     
Sbjct: 1418 QVHRLVLQQQESLSPGPCFRGTPFQDQEKYRNLEKQREELADIHKLQHRFQQEQRRWHRS 1477

Query: 375  -EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
             ++QQ  ++     L+    E + +  +L   R +   ++      +++L          
Sbjct: 1478 CDQQQREQEAKASRLQERERECRSQEELLLRNRGELDQQLQEYQQSLERLRE-----GQR 1532

Query: 434  KIKSCHTSVSITTRIL 449
             ++     + +   +L
Sbjct: 1533 LVERERERMRVQQSLL 1548


>gi|159045272|ref|YP_001534066.1| hypothetical protein Dshi_2732 [Dinoroseobacter shibae DFL 12]
 gi|157913032|gb|ABV94465.1| hypothetical protein Dshi_2732 [Dinoroseobacter shibae DFL 12]
          Length = 137

 Score = 38.6 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 5/78 (6%)

Query: 34  HVCVRGEISGYRGIHSSGH--AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
            V V G +   R    + H   + +L+D    I+ ++W     +       G    V G+
Sbjct: 42  RVRVAG-LVLLRQRPGTAHGVIFITLEDETGTINVVVWNAIYERFRRAVIAGRMLRVTGR 100

Query: 92  ITTFPGSSKYQIIIESLI 109
           I      +   +I E + 
Sbjct: 101 IQ--REGAVLHLIAEDIE 116


>gi|296218680|ref|XP_002807423.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           MRCK gamma-like [Callithrix jacchus]
          Length = 1552

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/222 (8%), Positives = 61/222 (27%), Gaps = 12/222 (5%)

Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297
            S IP +      +++ + D   +     P  +                 L +       
Sbjct: 351 ASYIPELRGPMDTSNFDVDDDTLNHPGTLPPPSHGAFSGHHLPFVGFTYTLGSHSLESSS 410

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
                    L  L +      +     R++           LE +          +   +
Sbjct: 411 EAWAAMERKLCCLEQEKVELSR-----RHQEAPHAPADHRELEQLRKEVQTLRERLSEML 465

Query: 358 KSDFLIHNIQK----NRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKN 411
           +    +  +      +     + QQ ++++ ++    R     +++++      +E+   
Sbjct: 466 RDKAPLSQMDGPPAGSPGQASDLQQELDRLHQELAEGRAGLQAQEQELCRAQGRQEELLQ 525

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           R+           ++    LS +++    +       + S +
Sbjct: 526 RLQEAQEREAATASQ-SQALSSQLEEAQAAQRELEAQVSSLS 566


>gi|289166017|ref|YP_003456155.1| peptidase, M23 family [Legionella longbeachae NSW150]
 gi|288859190|emb|CBJ13122.1| putative peptidase, M23 family [Legionella longbeachae NSW150]
          Length = 407

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 69/205 (33%), Gaps = 8/205 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D +  +       A   +  +   L   E ++   + +L   + +  ++  K +   DQ 
Sbjct: 76  DAQISSLQQMLNSAHDKRGVINKELSETEKQIGACVQKLRSIQNDINSTENKIVGLQDQV 135

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
              ++    +      H        +Y+    +IN+   + +   +   +  +  +QQ I
Sbjct: 136 NQLNKQLTTQQQLLANHIRARYHMGEYQPLKLLINQDDPNKVSRVLTYYQYIVKSRQQLI 195

Query: 381 EQIVKQHLRYIFLEKKEKI-----AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--- 432
            QI +        ++K +        L     Q + ++     +   LI  +   +    
Sbjct: 196 TQIDETRKNLNESKEKLRSELTANKQLKSELTQHQEKLNQNKGYHTALIQSLNHEIQDKQ 255

Query: 433 HKIKSCHTSVSITTRILQSFAYKNT 457
           + +     +     R+L+S + ++ 
Sbjct: 256 NTLHEAKRNKENLARLLKSLSQQSI 280


>gi|138896305|ref|YP_001126758.1| DNA polymerase III subunit alpha [Geobacillus thermodenitrificans
            NG80-2]
 gi|134267818|gb|ABO68013.1| DNA polymerase III alpha subunit [Geobacillus thermodenitrificans
            NG80-2]
          Length = 1095

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 29   ESNLSHVCVRGEISGYRGIHSS-G--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85
            E + S V V G I+  R   +  G   A+ ++ D    ++A+ +     +     EEG  
Sbjct: 938  EVHGSPVVVGGCIAELRKTRTKFGEEMAFITVSDESGELEAVAFPSVYARAAGELEEGNF 997

Query: 86   FLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117
             L+ G +     + + Q+++       +  L 
Sbjct: 998  VLLAGTVDM--RAGRRQLVLRRAERLPTSALY 1027


>gi|330984024|gb|EGH82127.1| DNA polymerase III subunit alpha [Pseudomonas syringae pv. lachrymans
            str. M301315]
          Length = 1201

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 6/101 (5%)

Query: 16   SVSELSYHLKHIVES----NLSHVCVRGEISGYRGIHSSGHAY--FSLKDNHSRIDAIIW 69
            S+ E++  ++  V+        HV V G +S      ++   Y  F L D  +R+D  I+
Sbjct: 969  SLIEIAQSVEDDVDGVEKAKFKHVTVAGLLSDIDARSNTKGTYAFFKLDDGTARLDCSIF 1028

Query: 70   KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
                ++ +   ++    ++ G +   P ++   +II+ + P
Sbjct: 1029 NKPYHEYQEFMKDDNLVVLNGIVRINPKTNIASLIIDRVQP 1069


>gi|270159151|ref|ZP_06187807.1| M23 peptidase domain protein [Legionella longbeachae D-4968]
 gi|269987490|gb|EEZ93745.1| M23 peptidase domain protein [Legionella longbeachae D-4968]
          Length = 386

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 69/205 (33%), Gaps = 8/205 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D +  +       A   +  +   L   E ++   + +L   + +  ++  K +   DQ 
Sbjct: 55  DAQISSLQQMLNSAHDKRGVINKELSETEKQIGACVQKLRSIQNDINSTENKIVGLQDQV 114

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
              ++    +      H        +Y+    +IN+   + +   +   +  +  +QQ I
Sbjct: 115 NQLNKQLTTQQQLLANHIRARYHMGEYQPLKLLINQDDPNKVSRVLTYYQYIVKSRQQLI 174

Query: 381 EQIVKQHLRYIFLEKKEKI-----AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--- 432
            QI +        ++K +        L     Q + ++     +   LI  +   +    
Sbjct: 175 TQIDETRKNLNESKEKLRSELTANKQLKSELTQHQEKLNQNKGYHTALIQSLNHEIQDKQ 234

Query: 433 HKIKSCHTSVSITTRILQSFAYKNT 457
           + +     +     R+L+S + ++ 
Sbjct: 235 NTLHEAKRNKENLARLLKSLSQQSI 259


>gi|194224356|ref|XP_001916455.1| PREDICTED: centrosomal protein 250kDa [Equus caballus]
          Length = 2306

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 57/195 (29%), Gaps = 4/195 (2%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D    +     E     KEHL   L      +     R+   +            + +Q 
Sbjct: 1489 DQEVKSQREQIEELQRQKEHLTQDLERRGQEMLLQKERIQVLEDQRTLQTKILEEDLEQI 1548

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                R R   L       ++                ++   LI   ++      +++   
Sbjct: 1549 KLSLRERGRELA-SQRQLMQERAEEGKGQSKAQRGSLEHLKLILRDKEKEVECQQERIQE 1607

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKS 437
             Q  +  L         K+    +L  Q +  I  L  H+++   +    +  L  +++ 
Sbjct: 1608 LQEHQDQLEQQLQGLHRKVGETSLLLTQREQEIVVLQQHLQEAREQEELEKQSLQGQLEE 1667

Query: 438  CHTSVSITTRILQSF 452
               +++   + L++ 
Sbjct: 1668 AQRALAQRDQELEAL 1682


>gi|327480470|gb|AEA83780.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri
           DSM 4166]
          Length = 1162

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/147 (10%), Positives = 48/147 (32%), Gaps = 11/147 (7%)

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK-----SDFLIHNIQKNRQ 371
            +Q LS +         E           ++  FN      +         I  ++++ +
Sbjct: 354 PEQELSGAAAEESAAQLEEAEATMQAWQEQWERFNQHSAEPRRAAEVQQSRIQQLEQSLE 413

Query: 372 HILEKQQHIEQ----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
            + E+Q+ ++     +         LE  E++    +  E        L+  +++L   +
Sbjct: 414 RLAERQRRLDDERALLAADPEDRAMLELDEQLTASELDLEALAAVAEELNERLEQLRDEL 473

Query: 428 EFI--LSHKIKSCHTSVSITTRILQSF 452
           +       +++     ++     L++ 
Sbjct: 474 QQATRAQQQVQGELQRLNGRIASLEAL 500



 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQSAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L  +Q       + LR    E  E+   +          I  + 
Sbjct: 245 GQREQVIGDQEVAFEALVAEQRSADASIERLRDGHHELSERFNQVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAEQARLE 330


>gi|157824053|ref|NP_001102215.1| liprin-alpha-2 [Rattus norvegicus]
 gi|149067045|gb|EDM16778.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2 (predicted)
           [Rattus norvegicus]
          Length = 1251

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLDGMEPGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKDRLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|148710090|gb|EDL42036.1| STE20-like kinase (yeast), isoform CRA_a [Mus musculus]
          Length = 1293

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 976  FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 1035

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 1036 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1089

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1090 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1129


>gi|329663311|ref|NP_001193006.1| STE20-like serine/threonine-protein kinase [Bos taurus]
 gi|297490945|ref|XP_002698513.1| PREDICTED: Germinal Center Kinase family member (gck-4)-like [Bos
            taurus]
 gi|296472806|gb|DAA14921.1| Germinal Center Kinase family member (gck-4)-like [Bos taurus]
          Length = 1240

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 923  FQNMLKNRKKEVINEVERAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 982

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 983  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1036

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1037 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1076


>gi|284799617|ref|ZP_06390248.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703]
 gi|284797531|gb|EFC52878.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703]
          Length = 635

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHTLQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  H         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVKLE 343


>gi|241562839|ref|XP_002401475.1| protein NUF1, putative [Ixodes scapularis]
 gi|215499874|gb|EEC09368.1| protein NUF1, putative [Ixodes scapularis]
          Length = 1069

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/345 (10%), Positives = 101/345 (29%), Gaps = 16/345 (4%)

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV 174
           +L T +++ +  L E  L     +  +    + +  +     A   +  +  + R  L V
Sbjct: 610 SLATDVQRLRLALSESELGRRNQEELLREGAQKVRRLQGELSAGREEAAELRTQRTALEV 669

Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234
            +           + +      L+ L+      R D +  A     +E   H  +E +  
Sbjct: 670 ALAAANEDKRVVGEALGALTENLHKLEANFKLMRTDQVAKAAQLSQLEREKHSLEERLSE 729

Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294
           A    S+         T  + A               E  V + E              +
Sbjct: 730 AQRELSLSCQQFDSQATSRSQAWGVEANDLRRQKADLERVVQMLEGELKQASARAREAAD 789

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLS------CSRYRLDRLPRELEHNLEIIIFRKYR 348
             ++  + +     +  +AL   + +L         R   ++  +  + + +        
Sbjct: 790 ERLKRSEERCERGEAEAEALSQQNASLQSRLSELERRLSEEKARQSAQDSRKEEQASWET 849

Query: 349 HFNHIINRIKSDFLIHNIQKNRQ--HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
               +   + +  L    +  R      +  +   +  + H      + + ++A    L 
Sbjct: 850 RVRELEQTLANWELSSRWRPPRSCSVGWKSSRSRRRGAEAHHSSESSDVRRELAKEQALS 909

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +  + +IF           R+   L  ++ +    ++  ++   +
Sbjct: 910 KDLRQKIFE--------EKRLSGQLRRQLSTLKEGLTSASQSADA 946


>gi|73998472|ref|XP_863855.1| PREDICTED: similar to Serine/threonine-protein kinase 10
           (Lymphocyte-oriented kinase) isoform 4 [Canis
           familiaris]
          Length = 946

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                  +   +  E       +R    K               + +   +  LD   ++
Sbjct: 629 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 688

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 689 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 742

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                    M R Q   R       +++   R+   L ++       +
Sbjct: 743 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 782


>gi|73998468|ref|XP_863816.1| PREDICTED: similar to Serine/threonine-protein kinase 10
           (Lymphocyte-oriented kinase) isoform 2 [Canis
           familiaris]
          Length = 957

 Score = 38.6 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                  +   +  E       +R    K               + +   +  LD   ++
Sbjct: 640 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 699

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 700 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 753

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                    M R Q   R       +++   R+   L ++       +
Sbjct: 754 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 793


>gi|284051544|ref|ZP_06381754.1| hypothetical protein AplaP_08726 [Arthrospira platensis str.
           Paraca]
          Length = 688

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 69/244 (28%), Gaps = 32/244 (13%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            D        A    +       S+ ++   R      + I     +++     L   + 
Sbjct: 350 CDRLKSWLNKAGMADLEESAIRMSTQVDDVDRQLGEFWQEIDQHQISISENRAELSKIET 409

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            L   + +L   P E    L+  +         +   + S         N Q I    Q 
Sbjct: 410 RLDDIKQKLRHFPDEDIQQLQKRLDEIESRIGELNREMGS---------NYQQIETLTQE 460

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
            E++ KQ  R    E K+  A      ++           + +++ R++     +++   
Sbjct: 461 CEKLSKQIDRQQMNEIKQLTA------QRRIAATEDAIARLSQVLERLDQQFRQQLEK-- 512

Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491
             V      +         + K  LK     ++ T+     +           + ++F  
Sbjct: 513 -RVQNIFSQISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565

Query: 492 GQAN 495
           G   
Sbjct: 566 GIIE 569


>gi|188534675|ref|YP_001908472.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99]
 gi|188029717|emb|CAO97596.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99]
          Length = 1119

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/176 (9%), Positives = 57/176 (32%), Gaps = 4/176 (2%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           +   +  E R     +  +  +       L       Q L  +        +    + + 
Sbjct: 783 RQQALEEERRQQQSRLEALDARSRQQQQTLSECQQQRQRLFGNALVTSVRQQLNGESEKH 842

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
                 +       + + + L    +   + ++     +++ VK+  +   L  ++   I
Sbjct: 843 QHNLHQQQQQWQRLQDRINTLTGQHKSLNEQLVNLHSRLDEAVKRVEQPENLTAQQ--QI 900

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH--TSVSITTRILQSFAYK 455
           L    E    ++  L +   +L  +++   + +++       V+   + L+ ++Y 
Sbjct: 901 LQASLEALSQQLRELASRQGQLRQQLDHDAARRLQQQSLLAQVAANEQQLEDWSYL 956


>gi|109138673|gb|ABG25914.1| DIX domain containing 1 isoform l [Homo sapiens]
          Length = 683

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 452 SYHQVDLER 460


>gi|269216495|ref|ZP_06160349.1| single-stranded DNA-binding protein [Slackia exigua ATCC 700122]
 gi|269130024|gb|EEZ61106.1| single-stranded DNA-binding protein [Slackia exigua ATCC 700122]
          Length = 155

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 10/75 (13%)

Query: 41  ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-- 96
           ++  R    +G      KD  + ID  ++      +     +G +  + GK+  + +   
Sbjct: 42  VNDRRKDPQTGEW----KDFPNYIDCTMFGTRAQSVSRFLSKGSKVAIEGKLRWSQWERD 97

Query: 97  --GSSKYQIIIESLI 109
               SK ++I++ + 
Sbjct: 98  GQKRSKIEVIVDEIE 112


>gi|258544063|ref|ZP_05704297.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258520691|gb|EEV89550.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 905

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 25/163 (15%)

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
           +  + + +  +  RL R   +  + L  +  +      +   +        NI++ R  +
Sbjct: 16  MSRTFRNIGAANSRLMRTFDQNRNALRRLNDQLRNVEAYRRQQESMRQTADNIERMRNRM 75

Query: 374 LEKQQHIEQIVKQHLRYIFLEKK-----EKIAILHMLREQTKNRIFYLHTHIKKL----- 423
              QQ +  +     R+  L  +       +A L  ++ + + R+  L   ++       
Sbjct: 76  QRLQQQMGGLRHGSQRWRELASQFDRASRDLARLESIQNREQQRLVELTQRLRAAGINTR 135

Query: 424 -----ITRIEFILSHK---IKSCHTSVSIT-------TRILQS 451
                  R+    +     ++     +           R LQ+
Sbjct: 136 ELAREEDRLRNSANRTNAELERQAQRLQRIAERHQRNERRLQT 178


>gi|237786617|ref|YP_002907322.1| Single-stranded DNA-binding protein [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237759529|gb|ACR18779.1| Single-stranded DNA-binding protein [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 192

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 59  DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114
           D  +  +   +W+          ++G+  +V G++   +F      Q  +  +     G
Sbjct: 50  DGDAMFLTCNVWRQAAENAAESLKKGMRVIVNGRLRQRSFETRDGEQRRVFEIEVDEVG 108


>gi|195397187|ref|XP_002057210.1| GJ16968 [Drosophila virilis]
 gi|194146977|gb|EDW62696.1| GJ16968 [Drosophila virilis]
          Length = 1045

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +  V      +    N E     + +     K     +L     N  Q  +    R+ +
Sbjct: 661 GDRKVFDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 720

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++          R+      +++ ++   L   + K +Q + +    +   +K H + 
Sbjct: 721 AQKQYIELEMRKFKRRRMI---LLHELEDQLLRDELSKKQQQLEQAHGML---LKHHEKT 774

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440
             LE +++ ++  +  EQ   +      + K  + RI+  L  K  ++    
Sbjct: 775 QELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQ 826


>gi|146308553|ref|YP_001189018.1| SMC domain-containing protein [Pseudomonas mendocina ymp]
 gi|145576754|gb|ABP86286.1| SMC domain protein [Pseudomonas mendocina ymp]
          Length = 1144

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 66/203 (32%), Gaps = 4/203 (1%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E +  + D  A      P  A  +    +    S    L+       +   +  +  L S
Sbjct: 528 EQEQRIQDLEAYRAHLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLES 587

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK- 368
               L +    L+    +L +   + +  +     +  +       +I     +  +Q+ 
Sbjct: 588 QGGTLRDELTRLATQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQRE 647

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
           + QH+ + QQ + Q+  +  +    + +    I        + R+  L    + L  R +
Sbjct: 648 HEQHLGQLQQRLAQVETR--QAELTQARSAREIAERALADMQQRLALLARDEENLQAR-Q 704

Query: 429 FILSHKIKSCHTSVSITTRILQS 451
              + +++     +    + L +
Sbjct: 705 REQNERLQGLEQELRHHDQALLA 727


>gi|160872306|ref|ZP_02062438.1| chromosome segregation protein SMC [Rickettsiella grylli]
 gi|159121105|gb|EDP46443.1| chromosome segregation protein SMC [Rickettsiella grylli]
          Length = 1176

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 61/198 (30%), Gaps = 3/198 (1%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
           ADY       +     + A   +       +  E +  + + +  + K+       K   
Sbjct: 713 ADYITQQADLSARQKVKHAQINQAQQHLLKLEKELKETDRLYKTTEEKLQQSIKEKKIAD 772

Query: 316 NSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            + + +   R   L+   +   H  E     K        + +      H ++    H+ 
Sbjct: 773 TALKQIEKQRLEHLENKEKRERHYNESARIAKMHEKELHQHALYLQETQHQLKTECTHLT 832

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
             +Q    + ++ ++       E  I  L        ++   L+  +K+  T++E  +  
Sbjct: 833 NLKQQYHPLEQRLIQLQHQLNAENSIDSLQQQLNAFISKRDTLYLQLKENKTQLET-IER 891

Query: 434 KIKSCHTSVSITTRILQS 451
            IK     +      L S
Sbjct: 892 HIKHAEERLHTLENRLNS 909


>gi|303244571|ref|ZP_07330905.1| phosphoesterase RecJ domain protein [Methanothermococcus
           okinawensis IH1]
 gi|302485119|gb|EFL48049.1| phosphoesterase RecJ domain protein [Methanothermococcus
           okinawensis IH1]
          Length = 643

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 14/97 (14%)

Query: 11  DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHSRIDAII 68
             P  ++ E++   K I+E     V ++GEI         G   F++ D  + + I A  
Sbjct: 97  SIPLTTIKEITD--KGILEMRDEVVHIQGEIIQITQTP--GPTIFTITDGTDTAWIAA-- 150

Query: 69  WKGTLNKIEFLPE--EGIEFLVIGKITTFPGSSKYQI 103
               +  +   PE   G    V+G ++      K QI
Sbjct: 151 --FEVAGLRTHPEIMVGDIVDVVGTVSI--RDGKLQI 183


>gi|296212471|ref|XP_002752847.1| PREDICTED: liprin-alpha-2 [Callithrix jacchus]
          Length = 1257

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +       +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGLEPGQKIHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|262171751|ref|ZP_06039429.1| GGDEF family protein [Vibrio mimicus MB-451]
 gi|261892827|gb|EEY38813.1| GGDEF family protein [Vibrio mimicus MB-451]
          Length = 371

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
              + +       L    + L            + +       +  L + +Q +   R  
Sbjct: 29  NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 87

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           +  +        ++      +    + + +    L  +    RQ +        +     
Sbjct: 88  MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSA 141

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 E++EK A    L          +    ++L+  +   L  K+      +    R
Sbjct: 142 KEAHAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANR 200

Query: 448 ILQSFA 453
            L++ +
Sbjct: 201 QLEALS 206


>gi|194044511|ref|XP_001929443.1| PREDICTED: centrosome-associated protein CEP250 isoform 1 [Sus
            scrofa]
          Length = 2440

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 58/195 (29%), Gaps = 4/195 (2%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D    +     E     KEHL   L   E  +  +  R+   +            + +Q 
Sbjct: 1629 DQEMTSQQDQTEELQRQKEHLTQDLKRREQEIVLLKERIQVLEDQRTLQTKILEEDLEQI 1688

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                R R   L       ++                ++   LI   ++      ++    
Sbjct: 1689 KMSLRERGRDLA-SQRQLMQERAEEGKGQSKAQRGSLEHMKLILRDKEKEVECQQEHIQE 1747

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKS 437
             Q  K  L         K+    +L  Q +  I  L  H+++   +    E  L  +++ 
Sbjct: 1748 LQEHKAQLEQQLQGLHRKMGETSLLLTQREQEIVALQRHLQEAREQGELKEQSLQGQLEE 1807

Query: 438  CHTSVSITTRILQSF 452
               +++   + L++ 
Sbjct: 1808 AQRALARRDQELKAL 1822


>gi|114640305|ref|XP_001144981.1| PREDICTED: dixin isoform 1 [Pan troglodytes]
          Length = 683

 Score = 38.6 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   +Y    +    K +      L       D   R L           
Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451

Query: 453 AYKNT-LKR 460
           +Y    L+R
Sbjct: 452 SYHQVDLER 460


>gi|307110431|gb|EFN58667.1| hypothetical protein CHLNCDRAFT_140952 [Chlorella variabilis]
          Length = 2507

 Score = 38.2 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/200 (7%), Positives = 53/200 (26%), Gaps = 10/200 (5%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
             A   A       + A+          +    +  + +++ +           +    +
Sbjct: 454 LLAHTAAQQAARDVQAAMEEALATGREEVEKVKQRYDSMLQEMAAFRAERQQWEEGQAAA 513

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           ++ L+  R   +   +     LE    +    F  ++ + +           ++     Q
Sbjct: 514 ERRLADERQSFEATAKSQREQLEADREQLRSDFEQLVAQQQERAAEWEEAAKQEEAALGQ 573

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--- 434
               +     +       + +   L  +    + RI      +     R+   ++     
Sbjct: 574 HKQARAAAPEVEAAEQRLQRRTEELSGV----ERRITAAQQRLDGEAERLRKAMAGLEEE 629

Query: 435 ---IKSCHTSVSITTRILQS 451
              ++     ++     L++
Sbjct: 630 GAGLRERADELAAREESLEA 649


>gi|78213768|ref|YP_382547.1| condensin subunit Smc [Synechococcus sp. CC9605]
 gi|78198227|gb|ABB35992.1| chromosome segregation protein SMC [Synechococcus sp. CC9605]
          Length = 1202

 Score = 38.2 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 71/231 (30%), Gaps = 17/231 (7%)

Query: 270  AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329
            +A  A   ++           +  + +      +    ++    +    Q L  + + L+
Sbjct: 887  SAHGAWRQQQSDLQDKRKQLEQQQSDLQERFGSQRRARDAAEAEVGRQRQALQQAEWNLE 946

Query: 330  RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN-------IQKNRQHILEKQQHIEQ 382
            RL  + E  +E            +   +               ++  +  +   QQ +E 
Sbjct: 947  RLKEDREGLIEEQ-RSGAVRLQEMEQALPDPRPEIPDSLRLAGLEALQADLQAIQQRMEA 1005

Query: 383  IVKQHLRYIFLEKK---------EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            +   ++  +   +          E++ +L+  RE+   RI  + T  +         +  
Sbjct: 1006 LEPVNMLALEELEALEERLNELNERLEVLNSEREELLLRIETVATLRQDAFMEAFTAVDG 1065

Query: 434  KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
              +    S+S     LQ       L+ G T +       + +  +++   +
Sbjct: 1066 HFREIFASLSDGDGHLQLENPDEPLEGGLTLVAHPKGKTVRRLASMSGGEK 1116


>gi|332230539|ref|XP_003264450.1| PREDICTED: liprin-alpha-4-like [Nomascus leucogenys]
          Length = 1204

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 50/190 (26%), Gaps = 3/190 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            +A   +      L +           L +        L + L  ++Q L  +  + + L
Sbjct: 305 YLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRKAETL 364

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
           P       + I      H    + R  +      +        E  +   Q +++     
Sbjct: 365 PEVEAELAQRIAALTKGHRGRALARDTATKSGRRLAGEGGGGQESGERGSQRMRRGQGRE 424

Query: 392 FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRI 448
                   + L       Q   ++       +    R+   +   +   +  +       
Sbjct: 425 SNPSGRGWSSLGGRPGARQAAVQVRQREKMNEDHNKRLSDTVDRLLSESNERLQLHLKER 484

Query: 449 LQSFAYKNTL 458
           + +   KNTL
Sbjct: 485 MAALEEKNTL 494


>gi|302870944|ref|YP_003839580.1| hypothetical protein COB47_0240 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302573803|gb|ADL41594.1| hypothetical protein COB47_0240 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 205

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 4/57 (7%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           K+++  +    ++ + R+  +   +  +  R++  +  ++ +    +    + L + 
Sbjct: 26  KQRLDRVEERLDRVEERLNRVEERLDMVEQRLD-AVERRLDAVEQRLDAVEQRLDAV 81



 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 4/64 (6%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
           +      +E++  +     + + R+  +   +  +  R++  +  ++ +    +    + 
Sbjct: 26  KQRLDRVEERLDRVEERLNRVEERLDMVEQRLDAVERRLD-AVEQRLDAVEQRLDAVEQR 84

Query: 449 LQSF 452
           L + 
Sbjct: 85  LDTV 88


>gi|301025779|ref|ZP_07189291.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1]
 gi|299879982|gb|EFI88193.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1]
          Length = 1048

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +        +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|293408541|ref|ZP_06652380.1| nuclease SbcCD [Escherichia coli B354]
 gi|291471719|gb|EFF14202.1| nuclease SbcCD [Escherichia coli B354]
          Length = 1047

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L +L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNSLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHTRQQIKEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +  +     +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|300798535|ref|NP_001178306.1| liprin-alpha-1 [Bos taurus]
 gi|297492266|ref|XP_002699470.1| PREDICTED: PTPRF interacting protein alpha 1-like [Bos taurus]
 gi|296471377|gb|DAA13492.1| PTPRF interacting protein alpha 1-like [Bos taurus]
          Length = 1202

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 51/181 (28%), Gaps = 2/181 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            +A   +      L +           + +   +    L + L  ++Q L  +  R + L
Sbjct: 329 YLAAQREATSVHDLNDKLENEIANKDSMHRQTEDKNRQLQERLELAEQKLQQTLRRAETL 388

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
           P       + +         H     +   +   +++  Q +   +Q  +   + + R  
Sbjct: 389 PEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLS 448

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
               K        L+   K R+  L      L       +  +++            L++
Sbjct: 449 DTVDKLLSESNERLQLHLKERMAALEDKNSLLRE--VENVKKQLEEMQNDKDQLILNLET 506

Query: 452 F 452
            
Sbjct: 507 L 507


>gi|115372000|ref|ZP_01459312.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310824624|ref|YP_003956982.1| hypothetical protein STAUR_7399 [Stigmatella aurantiaca DW4/3-1]
 gi|115370965|gb|EAU69888.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309397696|gb|ADO75155.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1012

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/187 (8%), Positives = 49/187 (26%), Gaps = 2/187 (1%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
               +    +E        L  +    +  L +                D+    +R R+
Sbjct: 659 MMESLNNAQQEFGGEQYPELTEKFGKFMEDLQQTVQEQQQVSEATKSLRDKARQQNRERI 718

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
               + ++  L   + +  + +  +            + + +  +   +  ++Q      
Sbjct: 719 SERGKAMKDELMRQVEQVQKSYAELGPEQLDSRAAAPMAEAQSQLENLKNALKQEDFDLA 778

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
                  +E    L  L E+ +                    ++ +++     V    + 
Sbjct: 779 SEAAQRAEEMAQQLAALGERQRQLDEMFGNPPDAREQ--SAQMAQRLQRDANRVQEVNQQ 836

Query: 449 LQSFAYK 455
           LQS   +
Sbjct: 837 LQSLFPQ 843


>gi|257467552|ref|NP_033315.2| STE20-like serine/threonine-protein kinase isoform 1 [Mus musculus]
 gi|94730572|sp|O54988|SLK_MOUSE RecName: Full=STE20-like serine/threonine-protein kinase;
            Short=STE20-like kinase; Short=mSLK; AltName: Full=Etk4;
            AltName: Full=STE20-related kinase SMAK; AltName:
            Full=STE20-related serine/threonine-protein kinase;
            Short=STE20-related kinase; AltName:
            Full=Serine/threonine-protein kinase 2
 gi|124297201|gb|AAI31676.1| STE20-like kinase (yeast) [Mus musculus]
          Length = 1233

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 916  FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 975

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 976  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1029

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1030 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1069


>gi|2773156|gb|AAB96682.1| serine/threonine protein kinase [Mus musculus]
          Length = 1233

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 916  FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 975

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 976  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1029

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1030 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1069


>gi|13507876|ref|NP_109825.1| hypothetical protein MPN137 [Mycoplasma pneumoniae M129]
 gi|12230685|sp|P75261|Y137_MYCPN RecName: Full=UPF0134 protein MPN_137
 gi|1673664|gb|AAB95665.1| hypothetical protein MPN_137 [Mycoplasma pneumoniae M129]
          Length = 228

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 7/144 (4%)

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
               DQ L   +  L  +        +  +       N  +  +    L+H  Q N+   
Sbjct: 62  HKQLDQKLKEFKQDLM-VELHDTFATKADLRDSEARINQKLEALVQVVLLHGEQINKLTQ 120

Query: 374 LEKQQ----HIEQIVKQHLRYIFLEKKEKI-AILHMLREQTKNRIFYLHTHIKKLITRIE 428
           + ++Q       Q+ ++  R  F  + +++  +L    E T  R   +   +  + +R++
Sbjct: 121 IVEKQGEQIRELQVEQKAQRQEFNARMDRLENLLVESIESTNKRFDSIEGRLDSMDSRLD 180

Query: 429 FILSHKIKSCHTSVSITTRILQSF 452
             + +++ S    +      L S 
Sbjct: 181 -SMENRLDSIEGRLDSVEGRLDSV 203


>gi|31242225|ref|XP_321543.1| AGAP001568-PA [Anopheles gambiae str. PEST]
 gi|19572387|emb|CAD27933.1| 30E5.11 [Anopheles gambiae]
 gi|30173787|gb|EAA43164.1| AGAP001568-PA [Anopheles gambiae str. PEST]
          Length = 615

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 59/197 (29%), Gaps = 5/197 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D   P    +A     V +  +        +     +R       TL+     L +    
Sbjct: 178 DKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGDR 237

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L   R R D   REL+  +      + +    +I   +    +   +  RQ   ++    
Sbjct: 238 LLEDRQRFDNYKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALE 297

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFIL---SHKIK 436
                +    +   +  +     + RE   ++ +  ++   ++ I   +  +    H+++
Sbjct: 298 ASKEMRRKNALEAIRMAEDRRTRLRRESEIEDALLQIYCEGQQNIASFKQAIHVNKHRLR 357

Query: 437 SCHTSV-SITTRILQSF 452
                +     R   + 
Sbjct: 358 DNSHQLVDALERQRAAL 374


>gi|323943202|gb|EGB39358.1| exonuclease SbcC [Escherichia coli E482]
          Length = 1048

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +        +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|315180370|gb|ADT87284.1| GGDEF family protein [Vibrio furnissii NCTC 11218]
          Length = 382

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 57/164 (34%), Gaps = 3/164 (1%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                 + R  ++       L++ +  ++  LS     + R       +++  +      
Sbjct: 46  RMALFELSRYAEFHFKEEEQLMRDVGIAEAHLSEHI-DVHRTFMSEIFSMQAFLSESDER 104

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
               +      +L ++I    Q++  + + IEQ +     Y   E++++ +    L    
Sbjct: 105 PAVQLLEFLIHWLAYHILGIDQNMARQVKAIEQGLSAQHAY-EQEERQRDSATEPLLNAL 163

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
                 +    ++LI R+   L  K+      +    R L++ +
Sbjct: 164 NGLFEQVSERNRELI-RVNQSLEEKVHERTQQLMQANRQLEALS 206


>gi|268316126|ref|YP_003289845.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252]
 gi|262333660|gb|ACY47457.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252]
          Length = 356

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI-- 341
                      ++   +      +  L++A   +++ L     RLDRL   +   +E   
Sbjct: 18  HPEWRAELRRLVLSEELLRLPELVQQLIEAHRRAEERLQHVEERLDRLEATVAQLVEAQR 77

Query: 342 ----IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY--IFLEK 395
                +       + +   +    LI   +K  + +   +  + Q+V+ H R        
Sbjct: 78  KAEERLQHVEERLDRLEATVAQ--LIEAQRKAEERLDRLEATVAQLVEAHRRAEERLDRL 135

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           +  +A L   + + + R+  L   + +LI   +     +++     +    + L+
Sbjct: 136 EATVAQLIEAQRKAEERLDRLEATVAQLIE-AQRKAEERLQRTEARLERVEKRLE 189


>gi|170088352|ref|XP_001875399.1| kinesin heavy chain [Laccaria bicolor S238N-H82]
 gi|164650599|gb|EDR14840.1| kinesin heavy chain [Laccaria bicolor S238N-H82]
          Length = 965

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 52/154 (33%), Gaps = 8/154 (5%)

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK---YRHFNHIINRIKSDFLIHNIQ 367
            + L  + + ++      D + + L H+L+    +        + I  +  +     N +
Sbjct: 759 AQDLERTRKAINVQLAEFDGVKKSLMHDLQNRCEKVVELEIQLDEIKEQYNNVIRNSNSK 818

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++ +   ++++EQ+     + +      K++  I          RI  L   ++    
Sbjct: 819 AQQKKMAFLERNLEQLTLVQKQLVDQNSTLKKEAGIAERKLLARNERIQNLEALLQDADR 878

Query: 426 RI---EFILSHKIKSCHTSVSITTRILQSFAYKN 456
           R+         ++++    +        + +  N
Sbjct: 879 RLSVQNQKFEAQLQAVKERLDQARAQKAASSPLN 912


>gi|16128382|ref|NP_414931.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12
           substr. MG1655]
 gi|89107267|ref|AP_001047.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12
           substr. W3110]
 gi|170079983|ref|YP_001729303.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899685|ref|YP_002925481.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952]
 gi|256023986|ref|ZP_05437851.1| exonuclease subunit SbcC [Escherichia sp. 4_1_40B]
 gi|300947958|ref|ZP_07162103.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1]
 gi|300957956|ref|ZP_07170123.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1]
 gi|301647314|ref|ZP_07247128.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1]
 gi|307137039|ref|ZP_07496395.1| exonuclease subunit SbcC [Escherichia coli H736]
 gi|331640911|ref|ZP_08342046.1| nuclease sbcCD, subunit C [Escherichia coli H736]
 gi|134253|sp|P13458|SBCC_ECOLI RecName: Full=Nuclease sbcCD subunit C
 gi|42914|emb|CAA34104.1| unnamed protein product [Escherichia coli K-12]
 gi|1657593|gb|AAB18121.1| exonuclease SbcC [Escherichia coli str. K-12 substr. MG1655]
 gi|1786597|gb|AAC73500.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12
           substr. MG1655]
 gi|85674537|dbj|BAE76177.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K12
           substr. W3110]
 gi|169887818|gb|ACB01525.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861057|gb|ACR63055.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952]
 gi|260450416|gb|ACX40838.1| exonuclease SbcC [Escherichia coli DH1]
 gi|300315350|gb|EFJ65134.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1]
 gi|300452457|gb|EFK16077.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1]
 gi|301074539|gb|EFK89345.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1]
 gi|315135079|dbj|BAJ42238.1| exonuclease subunit SbcC [Escherichia coli DH1]
 gi|315616665|gb|EFU97282.1| exonuclease sbcC [Escherichia coli 3431]
 gi|323938581|gb|EGB34830.1| exonuclease SbcC [Escherichia coli E1520]
 gi|331037709|gb|EGI09929.1| nuclease sbcCD, subunit C [Escherichia coli H736]
 gi|332341758|gb|AEE55092.1| exonuclease subunit SbcC [Escherichia coli UMNK88]
 gi|1586769|prf||2204364A sbcC gene
          Length = 1048

 Score = 38.2 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +        +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|326934576|ref|XP_003213364.1| PREDICTED: rho guanine nucleotide exchange factor 18-like, partial
           [Meleagris gallopavo]
          Length = 1048

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 7/196 (3%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
             P  A E +       Q     ++  + + +++ I+  +  L SL   +   D  +   
Sbjct: 737 DPPFDAEEGSQTSNTTRQDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIEL- 795

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             R   + RE ++ L+              N  K    + ++QK +  +  +QQ  E+  
Sbjct: 796 -QRATMVDREKQYRLQSTRGNLLLEQEKQRNFEKQREELMHVQKLQSQLKLEQQRWER-E 853

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
           +   R      +  +        Q K ++      +     R      H ++    +   
Sbjct: 854 RSQQRRELEISEAHLQRREEETRQLKEKLIQDREEL----ERQREAYQHDLERLREAQRA 909

Query: 445 TTRILQSFAYKNTLKR 460
             +  +       LK+
Sbjct: 910 VEKERERLDQLRKLKK 925


>gi|326913030|ref|XP_003202845.1| PREDICTED: pleckstrin homology-like domain family B member 2-like
           [Meleagris gallopavo]
          Length = 1258

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/172 (9%), Positives = 57/172 (33%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
              L    A L   +I     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 647 LDHLNRKIAELERNVIGEKAKEKLKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R     +      +   L     ++   + E+++++ Q + + +         +   
Sbjct: 707 QLKRDADLLDIESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRSIVSRKEK 764

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +     ++   ++    ++    +   + +
Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSTLS 815


>gi|317492789|ref|ZP_07951213.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918911|gb|EFV40246.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 1228

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 54/192 (28%), Gaps = 9/192 (4%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP---------NS 317
            +   +    +++ +Q+    L         +    +        + L            
Sbjct: 736 TSHTIQQITLLEQSIQTQRRQLAEWREEYHKQTSHQQQRQERLATELLELHLVAPLAGEE 795

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           ++ L+          +   H+ ++ +       +          L       +Q   E++
Sbjct: 796 NEWLAAREQEFSLWQQRQLHSQKLTLENTRLSADEQNLSQTLATLEKQWLTQQQLCAEQE 855

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           + + Q+  +    +     + +    +  EQ          H +  + +    LS ++ S
Sbjct: 856 KLLAQMQAERQTLLDGRSVDDVRRSLVQTEQLAEHQLQQAQHAESTVRQQLDKLSGELSS 915

Query: 438 CHTSVSITTRIL 449
               +S   + L
Sbjct: 916 AQQQLSQLEQRL 927


>gi|109090484|ref|XP_001114162.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 2
            [Macaca mulatta]
          Length = 1236

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 919  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 979  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072


>gi|300726791|ref|ZP_07060221.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775904|gb|EFI72484.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 472

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/176 (8%), Positives = 49/176 (27%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
                      L ++ +    +L        +++        +    +    +   +   
Sbjct: 21  SNNKHHQQETQLMSQRDIFQTKLESITQQNQHAIESLNKQLQEERERNAQEKEEARKLFL 80

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
           +    +     R    I  + K      +   N Q     ++ ++Q  ++  +    +  
Sbjct: 81  YEKNELRTEYVRQLEIIRQQHKESLEQQSKLINEQIHHASEEILKQRSEELSQTNQQQLS 140

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
             +  LH   +Q K  +          + R++  +   +K          ++ Q+ 
Sbjct: 141 AILTPLHENIKQMKEAVEKNDRDQSLSLERLDASIKANLKQAQEVGERADKLAQAL 196


>gi|300694449|ref|YP_003750422.1| transmembrane protein, duf802 [Ralstonia solanacearum PSI07]
 gi|299076486|emb|CBJ35806.1| putative transmembrane protein, DUF802 [Ralstonia solanacearum
           PSI07]
          Length = 698

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 62/232 (26%), Gaps = 42/232 (18%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYR 348
                 L     ++ TL+    R                   L +  E     ++ R  +
Sbjct: 389 QAWAEALSRQDQTNATLTGHHQRAMEAATAAFEQHASRLLHTLHQSHEDLQAGLVSRDQQ 448

Query: 349 HFNHIINRIKSDF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAIL 402
                   + S    L    ++       +QQ     + +              E I  +
Sbjct: 449 RLAAWTETLGSMAATLSQEWEQAGTRTASRQQEICETLARTAHDISARTQAHASETINEI 508

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLK 459
             L +            + +L  ++   +      ++     ++    +L +  + +T +
Sbjct: 509 SRLVQAASEAPRAAAEVVAELRQKLADSMVRDTEMLEERGRLLATLETLLDAVNHASTEQ 568

Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFD---------GQANAIVINKA 502
           R  +++   +    T    L    R+   F D         G A A +   A
Sbjct: 569 R--SAV---DGLISTSADLL---DRVGTRFADKVEAEGERLGTAAAQITGSA 612


>gi|258624398|ref|ZP_05719345.1| GGDEF family protein [Vibrio mimicus VM603]
 gi|258583245|gb|EEW08047.1| GGDEF family protein [Vibrio mimicus VM603]
          Length = 371

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
              + +       L    + L            + +       +  L + +Q +   R  
Sbjct: 29  NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 87

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           +  +        ++      +    + + +    L  +    RQ +        ++    
Sbjct: 88  MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRLGMSA 141

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 E++EK A    L          +    ++L+  +   L  K+           R
Sbjct: 142 KEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQFYQANR 200

Query: 448 ILQSFA 453
            L++ +
Sbjct: 201 QLEALS 206


>gi|18858271|ref|NP_571888.1| angiopoietin-1 [Danio rerio]
 gi|15077794|gb|AAK83347.1| angiopoietin-1 [Danio rerio]
          Length = 513

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318
           D   P    + +    ++  +++    L+   N I   +     ++             +
Sbjct: 81  DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              S      ++  +  +   +++          + N + ++ L   +      I +   
Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436
               + ++ ++ +    ++++  L   +   +  +    + I++L  ++     +   ++
Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259

Query: 437 SCHTSVSITTRILQSF 452
                +  + R L S 
Sbjct: 260 RQQQDLMESMRSLLSL 275


>gi|75907930|ref|YP_322226.1| exonuclease SbcC [Anabaena variabilis ATCC 29413]
 gi|75701655|gb|ABA21331.1| Exonuclease SbcC [Anabaena variabilis ATCC 29413]
          Length = 1008

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 53/196 (27%), Gaps = 4/196 (2%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN- 316
              D          ++   +++   +   +  AR      R  + K   +    K L   
Sbjct: 598 QVGDFALDQQAELRQLEQYLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDASKRLATL 657

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
           + +             R  +   +    ++       I  +      HN  +      + 
Sbjct: 658 AARKPELQAQITQLQTRIQQEQTDSEDAQQIAALEEQIAELGYSSEQHNNLRLAVRQSQA 717

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHK 434
            Q   Q +    +     +     +      + + R   L T I  L+ ++        +
Sbjct: 718 WQLRYQQLLSAQQQYPQLQGRLQDLEVSKLARLQER-QQLATQIDSLVEQLAQAANPREQ 776

Query: 435 IKSCHTSVSITTRILQ 450
           I++    ++   R L 
Sbjct: 777 IQALEQQLATRRRQLD 792



 Score = 37.0 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/181 (8%), Positives = 44/181 (24%), Gaps = 16/181 (8%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           E  +     ++        + +         L   +      +   +   +   +     
Sbjct: 633 EVERWRWAEIKQGQIKDASKRLATLAARKPELQAQITQLQTRIQQEQTDSEDAQQI--AA 690

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV------------KQ 386
           LE  I           N   +       Q   Q +L  QQ   Q+             + 
Sbjct: 691 LEEQIAELGYSSEQHNNLRLAVRQSQAWQLRYQQLLSAQQQYPQLQGRLQDLEVSKLARL 750

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--KIKSCHTSVSI 444
             R     + + +          + +I  L   +     +++  ++   +++     +  
Sbjct: 751 QERQQLATQIDSLVEQLAQAANPREQIQALEQQLATRRRQLDEQITQLGRLEQLAHQLET 810

Query: 445 T 445
            
Sbjct: 811 L 811


>gi|309700658|emb|CBI99954.1| exonuclease SbcC [Escherichia coli ETEC H10407]
          Length = 1048

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
                  L  L   D+    +  R   L + L    +                ++  +  
Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298

Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413
                  +   RQ I E    ++  +           K+   +           Q  +R 
Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358

Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
              +        +     S +  ++     ++   + L + 
Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|291405461|ref|XP_002718960.1| PREDICTED: myosin 18A [Oryctolagus cuniculus]
          Length = 2038

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/196 (8%), Positives = 61/196 (31%), Gaps = 5/196 (2%)

Query: 254  TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
             + D+  +        A       +     +      +   + I  +  +I+ +     A
Sbjct: 1669 VMLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKTKTA 1728

Query: 314  LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQH 372
            L      L   +  +     E + ++  ++ +           +     L   +++  + 
Sbjct: 1729 LEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKE 1788

Query: 373  ILEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIE 428
              E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++
Sbjct: 1789 KQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLEGLASRLK 1848

Query: 429  FILSHKIKSCHTSVSI 444
              +    +     ++ 
Sbjct: 1849 ENMEKLTEERDQRIAA 1864


>gi|222153151|ref|YP_002562328.1| DNA polymerase III DnaE [Streptococcus uberis 0140J]
 gi|222113964|emb|CAR42236.1| DNA polymerase III alpha subunit [Streptococcus uberis 0140J]
          Length = 1034

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           + ++ D   + D  ++    +K+  L  EG    + G++       + Q+++E++  + S
Sbjct: 910 FLTVTDTKKKCDVTVFPEQFSKVHSLLVEGQMVFIQGRVK--ERDGRLQVVLENIEMASS 967

Query: 114 GTLLTALE 121
                 +E
Sbjct: 968 KNFWLLVE 975


>gi|195438429|ref|XP_002067139.1| GK24176 [Drosophila willistoni]
 gi|194163224|gb|EDW78125.1| GK24176 [Drosophila willistoni]
          Length = 1944

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/131 (8%), Positives = 35/131 (26%), Gaps = 2/131 (1%)

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
               +   D L +    +LE            I   +         +  ++      Q  E
Sbjct: 1137 QELKEIQDALSKLKAESLEKQTQLTQLEEQSIQKELALGDASRQQENLKERCQALAQQNE 1196

Query: 382  QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
             + +Q              ++ + ++  + +        K    R    L  ++++    
Sbjct: 1197 TLQQQLNALQNSSTDSNAELVKLSQKLVEEQQAKEELSAKSNEER--ASLESQLQANQQR 1254

Query: 442  VSITTRILQSF 452
            +      +++ 
Sbjct: 1255 LDTLCSQVEAL 1265


>gi|195388517|ref|XP_002052926.1| GJ19558 [Drosophila virilis]
 gi|194149383|gb|EDW65081.1| GJ19558 [Drosophila virilis]
          Length = 1983

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/132 (8%), Positives = 44/132 (33%), Gaps = 3/132 (2%)

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            +     ++D L  +     +  +           +    + L   + +      ++QQ  
Sbjct: 1330 VQYMSKQMDMLSCQESKA-KSTLEETIALLQQTQH--SCEELRQQLHEKDVEWAQRQQER 1386

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            E + +  L+    + +E   I      + ++++       K+ +      ++H+++    
Sbjct: 1387 EHLQRTELQQAQEKVQEVQLIAKERFRELESQLQAKDEEKKEALQAYHQEIAHQLRHKQQ 1446

Query: 441  SVSITTRILQSF 452
             ++   + +   
Sbjct: 1447 QLTFAEQQVLQL 1458


>gi|311263904|ref|XP_003129917.1| PREDICTED: dixin-like [Sus scrofa]
          Length = 818

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 9/236 (3%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D   + D R  +P    E +   +   Q   
Sbjct: 364 SESIITQSEEKADFVIIPSEGIENRTEEIDSPLSRDWRPGSPGTYLETSWEEQLLEQQEH 423

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L        + +   
Sbjct: 424 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEEN 483

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
           +      +  + ++  L       +Q + ++   + Q+ ++ LR    + +     LH  
Sbjct: 484 QDLKKELLKYKQEARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDE-----LHNQ 538

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
               + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 539 NVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSEASYQQVDLER 593


>gi|301614754|ref|XP_002936852.1| PREDICTED: STE20-like serine/threonine-protein kinase [Xenopus
            (Silurana) tropicalis]
          Length = 1329

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 43/130 (33%), Gaps = 3/130 (2%)

Query: 313  ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 ++       +     ++ +  L+  + +        +  I+ D L H  Q  R  
Sbjct: 1039 MKRKKEELAQSQHAQEQEFVQKQQQELDGSLKKIIHQQKTELANIERDCLNHKQQLMRAR 1098

Query: 373  ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                 +  E+ +++  + +  + K++     M R Q   R       +++   R+   L 
Sbjct: 1099 EAAIWELEERHLQEKHQLLKQQLKDQ---YFMQRHQLLKRHEKEMEQMQRYNQRLIEELK 1155

Query: 433  HKIKSCHTSV 442
            ++       +
Sbjct: 1156 NRQTQERARL 1165


>gi|183598375|ref|ZP_02959868.1| hypothetical protein PROSTU_01767 [Providencia stuartii ATCC 25827]
 gi|188020551|gb|EDU58591.1| hypothetical protein PROSTU_01767 [Providencia stuartii ATCC 25827]
          Length = 1481

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/178 (7%), Positives = 49/178 (27%), Gaps = 9/178 (5%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
           +      L +L     +  +   + +       L  L         +  + ++  + ++ 
Sbjct: 425 RARELCQLPDLSIENADEWLETFEAREQQATEALLTLEQKISVADAAHSQFEQAYQLVKS 484

Query: 338 NLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
            +  +   +        + +      L   +Q  R  + E QQ ++             K
Sbjct: 485 MVGEVSRSEAYQQARALLRDWSSQQHLAERVQPLRMQLAELQQRLDSQQNAERLLNEFCK 544

Query: 396 KEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448
           +   +      +     +      +     +    R++  +  +++     + + T  
Sbjct: 545 RHNKSYEPDELDGLMAELEAQQEELSVGVNESGERRMQ--MRQELEQIRQRIQVLTAK 600


>gi|167538540|ref|XP_001750933.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770571|gb|EDQ84258.1| predicted protein [Monosiga brevicollis MX1]
          Length = 544

 Score = 38.2 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/163 (8%), Positives = 46/163 (28%), Gaps = 9/163 (5%)

Query: 297 IRLIKYKINTLNSL-------LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           +  +                  K+LP + + L  +  RL    +     L          
Sbjct: 355 MHRVDTLRQRAQCSDVSAPLSAKSLPEAWEQLCQAHERLSSPKQNGLEQLADWRAEHDYE 414

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIFLEKKEKIAILHMLRE 407
                           +Q+ +  I  + + +    + +++   I     +++  +H    
Sbjct: 415 HQDWYLAFVLHETQALLQQLQDMIDWQAKTLSVVTLCEEYASSITQSSADQVVSIHEEVA 474

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           + + +I      +  +   +   +   +      +S   + L+
Sbjct: 475 ELQKKIQATTAFLAFVSDDMRAGIQANLDEEKERLSTLQQQLE 517


>gi|312385329|gb|EFR29856.1| hypothetical protein AND_00897 [Anopheles darlingi]
          Length = 742

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/218 (7%), Positives = 60/218 (27%), Gaps = 19/218 (8%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D+   L+       A      +E  Q   +N   +      R    +    +  L+ L 
Sbjct: 488 LDHKTRLQWIAALQLAITYSTGREGFQRDTVNRRRQQRESEQRRRLEEEQLRSQHLRKLE 547

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
            +   L   +        +      +      R       ++  + ++ +  + ++    
Sbjct: 548 ETHVQLEREKQARMAAESQARQYEAVAREDSRRVAELEDVKLCLEKMLEDEIQAKRDEEI 607

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE-FILSHK 434
            +    +++ +        ++ +     +L ++ + RI +     +     +E   +  +
Sbjct: 608 VRALQARVLAEEWEKREELEQLQAEQTSLLEQERQKRIEFEGRQQQNEQKLLEAQAMLRQ 667

Query: 435 IKSCHTSVSI------------------TTRILQSFAY 454
           ++     +                        LQ+ + 
Sbjct: 668 LEEERKRLDRELKLARQKIQLSEDNKGIVEAKLQAMSP 705


>gi|159029839|emb|CAO90893.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1009

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 62/207 (29%), Gaps = 24/207 (11%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           +         +E     L  L+   N       + +        + L    + L   +  
Sbjct: 213 STQINQINQEQEVNNWRLQQLQGEENQRQNWEKQLQWQREREQERVLLAEIERLDREKVS 272

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           LD    +++  L         H   I    K   L   +Q  +Q   +KQQ  +++ ++ 
Sbjct: 273 LDNQLNQIKTILHRKNDIITAHERLINLDQKEASLSSQLQAWQQAQYDKQQLEQKLQQKI 332

Query: 388 LRYIFLEKKEKIAILHMLREQTKNR--------IFYLHTHIKKLITRIEFI--------- 430
             +    ++    +  + R++ + +        I      +     R++ +         
Sbjct: 333 NEFTLPIQQTSARLEELRRQEQETQKIIEQAGDIQAALEKLNYHRQRLQELDRLALKYAP 392

Query: 431 -------LSHKIKSCHTSVSITTRILQ 450
                  L+ +++     ++     LQ
Sbjct: 393 LNSRKADLNMQLEREKARINARREQLQ 419


>gi|60360056|dbj|BAD90247.1| mKIAA1052 protein [Mus musculus]
          Length = 1172

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 42/145 (28%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   +E     E    +K          + S       +
Sbjct: 501 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 560

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             R+H  +  +  E+  ++        + E+      L       +  L    ++ +  +
Sbjct: 561 VEREHERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERELESM 620

Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452
                 +++          R LQ  
Sbjct: 621 RQEQDQQLEDLRRRHRDHERKLQDL 645


>gi|332212748|ref|XP_003255481.1| PREDICTED: LOW QUALITY PROTEIN: STE20-like serine/threonine-protein
            kinase-like [Nomascus leucogenys]
          Length = 1236

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 919  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 979  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072


>gi|318604578|emb|CBY26076.1| exonuclease SbcC [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 1229

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/194 (9%), Positives = 62/194 (31%), Gaps = 8/194 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           A +A       Q     L  +    +  LI  + ++L  L   L       + ++ +L+ 
Sbjct: 336 ANLARQQHATNQHEQETLIEQKVIPLDNLIAQQQHSLMLLGTQLEQLRTKENQNKQQLEL 395

Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
             ++ +   + +         H  +   + +  +   Q  +  + ++Q    +   Q   
Sbjct: 396 SKQQSKLAHQRLQQLTEYTQQHAHHQHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQA 455

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448
            +    +++I  L+   +Q +  +   H+    +  ++  +   +        +    + 
Sbjct: 456 TLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515

Query: 449 ------LQSFAYKN 456
                 L + +   
Sbjct: 516 RPVRQQLAALSPLA 529


>gi|194760671|ref|XP_001962561.1| GF14378 [Drosophila ananassae]
 gi|190616258|gb|EDV31782.1| GF14378 [Drosophila ananassae]
          Length = 8003

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 56/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       +A +     R  +        L ++  +   +
Sbjct: 7319 HFNIQKLSHAIGNVQSQSSDLALVNQQAQALIRQADARNRQLIEQDNAGLNRSWQDLVHS 7378

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7379 LEQRRDNLQQLAEHWDG-FENGLHGWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7437

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7438 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLREKEQQ 7497

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7498 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7529


>gi|190337593|gb|AAI63531.1| Angiopoietin 1 [Danio rerio]
 gi|190339926|gb|AAI63513.1| Angiopoietin 1 [Danio rerio]
          Length = 513

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318
           D   P    + +    ++  +++    L+   N I   +     ++             +
Sbjct: 81  DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              S      ++  +  +   +++          + N + ++ L   +      I +   
Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436
               + ++ ++ +    ++++  L   +   +  +    + I++L  ++     +   ++
Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259

Query: 437 SCHTSVSITTRILQSF 452
                +  + R L S 
Sbjct: 260 RQQQDLMESMRSLLSL 275


>gi|114570243|ref|YP_756923.1| RND family efflux transporter MFP subunit [Maricaulis maris MCS10]
 gi|114340705|gb|ABI65985.1| efflux transporter, RND family, MFP subunit [Maricaulis maris
           MCS10]
          Length = 421

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 48/179 (26%), Gaps = 18/179 (10%)

Query: 336 EHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
              LE  I         + +    +   L   +   R  + E      Q   +  R + L
Sbjct: 110 NPALEREIADSLVRLGRDSLAIEAQIADLNRRVSDARSQLREISFRKRQAETELERNLVL 169

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E++   +   M R + +   +          + +              ++     L+  +
Sbjct: 170 EQRGFASPARMARLRDEVAFYAAEE---LDASNVLNAARLDADRRSERLNAAQARLERLS 226

Query: 454 YKNTLKR--GYTSIQDTNNNFITQKRNLATKTRILI-----NFFDG---QANAIVINKA 502
            ++   R  G       +         L+    ++         +G   +  A V+  A
Sbjct: 227 -QSIADRLDGLAIRAPGDGQI--SGLALSVGEPVVAGDVLFTLTEGRPDRVTAQVMESA 282


>gi|45383530|ref|NP_989639.1| amyloid beta A4 protein [Gallus gallus]
 gi|9837547|gb|AAG00594.1|AF289219_1 beta-amyloid precursor protein 751 isoform [Gallus gallus]
          Length = 751

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S +P  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDSEEYCMAVCGSVLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSFLYN 531


>gi|313679014|ref|YP_004056753.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM
           14977]
 gi|313151729|gb|ADR35580.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM
           14977]
          Length = 583

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 47/137 (34%), Gaps = 4/137 (2%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
              L   R RL    +     L      +    +    R + +      ++ R+    + 
Sbjct: 49  RSRLEAERRRLVEETQREVEQLRQSAREEAARLSEQARR-ELEEARAEARQLRERAEAEA 107

Query: 378 QHIEQIVKQHLRYIFLEKKEKI-AILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--K 434
             +   ++  ++    E+++++ A L   RE+ +  +  +    ++L  + E +     +
Sbjct: 108 DRLRAKLEAEMKERLAEERQRLEADLARDRERIERDLEAIRREREELKRQDERLARRGEQ 167

Query: 435 IKSCHTSVSITTRILQS 451
           + +    +      L +
Sbjct: 168 LDARAARLDELEEKLNA 184


>gi|296234646|ref|XP_002762551.1| PREDICTED: hypothetical protein LOC100393763 [Callithrix jacchus]
          Length = 376

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 20/171 (11%)

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           + RL + +     SL     +  + L+     L  L     H   +   +       +  
Sbjct: 1   MGRLAENRRQQAQSL-----SPLKILTEHLQSLSPLKILTGHLRWLSPLKILAPLKILAG 55

Query: 356 RIKSDFLIHNIQKNRQHILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
            ++S   +  + ++ Q +   +   +H++ +    +    L+    + IL    +     
Sbjct: 56  HLQSLSPLKILTEHLQSLSPLKILTEHLQSLSPLKILTEHLQSLSPLKILAEHLQSLSP- 114

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTS----VSITTRILQSFAYKNTLK 459
                  +K L   ++ +   KI + H      + I T  LQS +    L 
Sbjct: 115 -------LKILTEHLQSLAPLKILTEHLQSLSPLKILTEHLQSLSPLKILA 158


>gi|194041975|ref|XP_001929465.1| PREDICTED: STE20-like kinase isoform 2 [Sus scrofa]
          Length = 1237

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 920  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 979

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 980  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1033

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1034 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1073


>gi|148724939|emb|CAK03873.2| angiopoietin 1 [Danio rerio]
 gi|148725450|emb|CAN87998.1| angiopoietin 1 [Danio rerio]
 gi|148725995|emb|CAN87959.1| angiopoietin 1 [Danio rerio]
          Length = 513

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318
           D   P    + +    ++  +++    L+   N I   +     ++             +
Sbjct: 81  DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              S      ++  +  +   +++          + N + ++ L   +      I +   
Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436
               + ++ ++ +    ++++  L   +   +  +    + I++L  ++     +   ++
Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259

Query: 437 SCHTSVSITTRILQSF 452
                +  + R L S 
Sbjct: 260 RQQQDLMESMRSLLSL 275


>gi|48257281|gb|AAH41626.2| DIXDC1 protein [Homo sapiens]
          Length = 357

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/125 (7%), Positives = 35/125 (28%), Gaps = 6/125 (4%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           ++  + +       +   +          +  +     QQ + Q     L+      +  
Sbjct: 13  IQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRAN 70

Query: 399 IAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
           +    +  +    + ++   +  + +    +       ++     +    R L   +Y  
Sbjct: 71  MDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDVSYHQ 129

Query: 457 T-LKR 460
             L+R
Sbjct: 130 VDLER 134


>gi|41281453|ref|NP_055535.2| STE20-like serine/threonine-protein kinase [Homo sapiens]
 gi|74762732|sp|Q9H2G2|SLK_HUMAN RecName: Full=STE20-like serine/threonine-protein kinase;
            Short=STE20-like kinase; Short=hSLK; AltName: Full=CTCL
            tumor antigen se20-9; AltName: Full=STE20-related
            serine/threonine-protein kinase; Short=STE20-related
            kinase; AltName: Full=Serine/threonine-protein kinase 2
 gi|11385654|gb|AAG34908.1|AF273048_1 CTCL tumor antigen se20-9 [Homo sapiens]
 gi|55664645|emb|CAH70404.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens]
 gi|55957391|emb|CAI12395.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens]
 gi|119570000|gb|EAW49615.1| STE20-like kinase (yeast), isoform CRA_a [Homo sapiens]
 gi|119570003|gb|EAW49618.1| STE20-like kinase (yeast), isoform CRA_a [Homo sapiens]
          Length = 1235

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 918  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 977

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 978  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1031

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1032 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1071


>gi|332225632|ref|XP_003261987.1| PREDICTED: dystrobrevin alpha isoform 5 [Nomascus leucogenys]
          Length = 452

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 187

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280


>gi|297687336|ref|XP_002821172.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 1
            [Pongo abelii]
          Length = 1236

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 919  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 979  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072


>gi|291409887|ref|XP_002721232.1| PREDICTED: coiled-coil domain containing 157-like [Oryctolagus
           cuniculus]
          Length = 704

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 8/198 (4%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
           L A T    A         +   +  L   +  +  +L + +        +     +Q L
Sbjct: 267 LPAATMGHWAAEQSKDLARISKHVGALTQLVGPLRAQLEEAEGQKDRLGTRV-AELEQAL 325

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHI 380
              + R  +   E E  L      + +      + ++K   L   +++ ++     +   
Sbjct: 326 RQEQERGRQQAEEAEQRLAAWEDNRQQLLAETSDLKMKVAALEGELKQQQESTQAVEAKA 385

Query: 381 EQIVKQHLRYIFLEKK-----EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           +Q++++       E++     E++ +L    +  + +I +  T + K   R++ ++ H+ 
Sbjct: 386 QQMLEEREHRAAAERQVQRLEEQVQLLAAQLDGARQQIHWASTELDKEKARVDSMVRHQ- 444

Query: 436 KSCHTSVSITTRILQSFA 453
           +S         + L S  
Sbjct: 445 ESLQAKQRALLQQLDSLD 462


>gi|260768669|ref|ZP_05877603.1| GGDEF family protein [Vibrio furnissii CIP 102972]
 gi|260616699|gb|EEX41884.1| GGDEF family protein [Vibrio furnissii CIP 102972]
          Length = 382

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 57/164 (34%), Gaps = 3/164 (1%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
                 + R  ++       L++ +  ++  LS     + R       +++  +      
Sbjct: 46  RMALFELSRYAEFHFKEEEQLMRDVGIAEAHLSEHI-DVHRTFMSEIFSMQAFLSESDER 104

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
               +      +L ++I    Q++  + + IEQ +     Y   E++++ +    L    
Sbjct: 105 PAVQLLEFLIHWLAYHILGIDQNMARQVKAIEQGLSAQHAY-EQEERQRDSATEPLLNAL 163

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
                 +    ++LI R+   L  K+      +    R L++ +
Sbjct: 164 NGLFEQVSERNRELI-RVNQSLEEKVHERTQQLMQANRQLEALS 206


>gi|183601022|ref|ZP_02962515.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827]
 gi|188019360|gb|EDU57400.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827]
          Length = 1225

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/155 (6%), Positives = 41/155 (26%), Gaps = 6/155 (3%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +      + + +        L   + R   +    E   + +I ++    +      +  
Sbjct: 180 EIYSQISSYIYRQHKQVKNDLEILKARAQSIHLLTESEHQALIEQQTVLADQERQLNQKR 239

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                    +Q   +    + Q+     +     +  +     +        +  L   +
Sbjct: 240 TQNQQALYWQQRQQQLTARLHQLELDQQQAEKAYQDAEPQFKKLSDNLPAENLRPLWQDV 299

Query: 421 KKLITRI------EFILSHKIKSCHTSVSITTRIL 449
           ++    +      +  LS + ++    ++     L
Sbjct: 300 ERQQQALNELLEKQQSLSQQCENNTQQLTPLQAQL 334


>gi|114675004|ref|XP_001145436.1| PREDICTED: rho guanine nucleotide exchange factor 18, partial [Pan
           troglodytes]
          Length = 782

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 7/154 (4%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            L   L + +++ I+     L +L   + + D  +     R     RE +  L+      
Sbjct: 400 RLSTVLESELVQRIQTLSQLLLNLQAVIAHQDSYVET--QRAAIQEREKQFRLQSTRGNL 457

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                   N  K       ++K +  + ++QQ  E+  +   + + L    ++       
Sbjct: 458 LLEQERQRNFEKQREERAALEKLQSQLRQEQQRWERERQWQHQELEL-AGARLQEREGEA 516

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            Q + R+      +     R      H ++    
Sbjct: 517 RQLRERLEQERAEL----ERQRQAYQHDLERLRE 546


>gi|114632691|ref|XP_508017.2| PREDICTED: STE20-like kinase isoform 5 [Pan troglodytes]
          Length = 1236

 Score = 38.2 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 919  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 979  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072


>gi|333010611|gb|EGK30044.1| hypothetical protein SFVA6_0407 [Shigella flexneri VA-6]
          Length = 615

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 487

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372
           Q    +R R+     E    +   +    +  +       RI+S          +K +Q 
Sbjct: 488 QRREAARQRIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 547

Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            L +QQ     ++I         + +++           + + +   +     +  R+  
Sbjct: 548 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSTVRERLSE 607

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 608 RGARRLER 615


>gi|295695654|ref|YP_003588892.1| DNA polymerase III, alpha subunit [Bacillus tusciae DSM 2912]
 gi|295411256|gb|ADG05748.1| DNA polymerase III, alpha subunit [Bacillus tusciae DSM 2912]
          Length = 1022

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 53   AYFSLKDNHSRIDAIIWKGTLNKIE---FLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109
             +FSL+D    +DA++++    +     F P + I   V G +         Q++++ + 
Sbjct: 963  VFFSLEDETGIVDAVMFEKEYRRSGGDLFRP-DAIALGVHGTVE--RRRGHLQLVVDRVR 1019


>gi|168047899|ref|XP_001776406.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672250|gb|EDQ58790.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 676

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 71/250 (28%), Gaps = 21/250 (8%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                    +  +I    ++          L N  + +     R           +E + 
Sbjct: 105 RERRQRIGNSKAMIERKLWQPKPCKHWSIKLINLMEAIFQELLREFERQYYQLSKVEKLT 164

Query: 344 FRKYRH---FNHIINRIKSDF-LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
               +          ++K    L    ++  + +  K +++E  +    +    + +  I
Sbjct: 165 LEPNKVDLFLQAADRKLKGKLELFLKDKEEDEGLTTKWKNVENAMGLLTKRERKKDRSNI 224

Query: 400 AILHMLREQTKNRIFYLHTHIKK---LITRIEFILSHKIKSCHT---SVSITTRILQSFA 453
                  +            ++    L  + +  +   I+        ++       +  
Sbjct: 225 PKTIQAPKAPIRTTRPTMPTVQPSTSLSKKADIGMEEIIQGMRDLQIKLARLEENTSTNN 284

Query: 454 YKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512
            KN LK+GY      +    +  + +L     +  NF  G+  A+V +     +   ++ 
Sbjct: 285 SKNVLKQGY-----KDGKIALRDREDL-----LQTNFGKGRMRALVQDYLKEHKIAARES 334

Query: 513 QLHNNKREKQ 522
             H  + +  
Sbjct: 335 ASHGARVDDD 344


>gi|114319988|ref|YP_741671.1| hypothetical protein Mlg_0827 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226382|gb|ABI56181.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 1137

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/177 (7%), Positives = 50/177 (28%), Gaps = 7/177 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
           P+          +  RL+ +     + +            ++ +  + +           
Sbjct: 457 PLPAPEVWEEAAVRQRLDELEQAWHQARSLQQRRQEADQLHAQRGRARTEQAEAEQALHR 516

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLE 394
                 +       F+  +  +         Q  ++ +L++Q Q ++ +      ++   
Sbjct: 517 HAAALGLDAELPLAFDRAVRLLSRHQEAREQQAAQEAVLDRQAQELDTLRDTLHHFLATW 576

Query: 395 ----KKEKIAILHMLREQTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSVSIT 445
               ++E+   L    +  + R        ++     R+   L  +++     +   
Sbjct: 577 HTAPREERSEALGAALDDLRQRCEAAERARQQADNATRLIRELERQLRDTRRQLDQL 633


>gi|195972857|ref|NP_001124427.1| rho guanine nucleotide exchange factor 18 isoform b [Homo sapiens]
 gi|296439444|sp|Q6ZSZ5|ARHGI_HUMAN RecName: Full=Rho guanine nucleotide exchange factor 18; AltName:
           Full=114 kDa Rho-specific guanine nucleotide exchange
           factor; Short=p114-Rho-GEF; Short=p114RhoGEF; AltName:
           Full=Septin-associated RhoGEF; Short=SA-RhoGEF
          Length = 1173

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             + +L + L N    ++         R     RE +  L+              N  K 
Sbjct: 802 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 861

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +  +QQ  E+  +   + +      ++        Q + R+      
Sbjct: 862 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 920

Query: 420 IKKLITRIEFILSHKIKSCHT 440
           +     R      H ++    
Sbjct: 921 L----ERQRQAYQHDLERLRE 937


>gi|221632119|ref|YP_002521340.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159]
 gi|221156495|gb|ACM05622.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159]
          Length = 807

 Score = 38.2 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 37  VRGEISGYRGIHSS-GHAYFS--LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93
           V GE+       +S G  Y S  L+D    I  I +      I    E G    V G++ 
Sbjct: 182 VIGEVVQIETRETSGGRRYVSVQLRDETGTIPVIWF---NPYIARQLEAGQRIAVSGRL- 237

Query: 94  TFPGSSKY 101
              G   Y
Sbjct: 238 --EGHGPY 243


>gi|301118911|ref|XP_002907183.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262105695|gb|EEY63747.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2213

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 7/175 (4%)

Query: 277  VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
              EH ++S+  LE+    + +RL +      +       ++       R +L +L     
Sbjct: 1360 EIEHWKASVHQLESDKRGLELRLQEVMRQATDQFETQKHSAAMATEDGRTQLQKLTA--- 1416

Query: 337  HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                 ++ R  +         +   ++ ++++  +    + + ++    Q    +   + 
Sbjct: 1417 ----QLVQRDAQMTEGHQQLRRMQEMVRSLEEKLRTQQYESESLQMKNDQLNGQLDALRN 1472

Query: 397  EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            EK  + H++R  T      L   + + + R+   +  +++      +    +L S
Sbjct: 1473 EKRGLEHVMRRHTSTLRDGLEEDLSQRLERLARDMERRVQEESEKTAQLQSVLDS 1527


>gi|208019305|emb|CAQ14332.1| finTRIM family protein [Danio rerio]
          Length = 498

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 48/187 (25%), Gaps = 5/187 (2%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
               V +  + Q+ L   E         LI         + +      +    +  R   
Sbjct: 46  KSCLVCLNSYCQNHLEQHENLFKGKRHNLIDATGRLQEMICRKHDKLLEIYCRTDQRCIC 105

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           +   ++ + +               ++         Q+  Q    K Q + + VK H R 
Sbjct: 106 MLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRERKLQELNEAVKIHERS 163

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT---R 447
                K+   +   L    + +   +   I+             +K     +        
Sbjct: 164 AQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLLKQLQQEIDDLRGKNA 223

Query: 448 ILQSFAY 454
            L+  +Y
Sbjct: 224 KLEQLSY 230


>gi|195437272|ref|XP_002066564.1| GK24496 [Drosophila willistoni]
 gi|194162649|gb|EDW77550.1| GK24496 [Drosophila willistoni]
          Length = 7988

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/211 (9%), Positives = 57/211 (27%), Gaps = 21/211 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +       +L +      + 
Sbjct: 7304 HFNIQKLSHAIGNVQSQSSELTLVNQQAQSLIRQADSRNRQLIEQDNANLNRLWQELIRG 7363

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    + + E  +    +    + ++ ++   I   +++ +      Q +
Sbjct: 7364 LEQRRDNLQQLAEHWD-SFENSLHAWEKSLGRLEDKFRNVDPIVRSRRHLEDTKNAIQEL 7422

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7423 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLREKEQQ 7482

Query: 433  ------------HKIKSCHTSVSITTRILQS 451
                         +I      ++     LQS
Sbjct: 7483 VSKDLDEIEQVFRRISQLQDKLNSLNEQLQS 7513


>gi|118366791|ref|XP_001016611.1| hypothetical protein TTHERM_00189350 [Tetrahymena thermophila]
 gi|89298378|gb|EAR96366.1| hypothetical protein TTHERM_00189350 [Tetrahymena thermophila
           SB210]
          Length = 1238

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/172 (8%), Positives = 56/172 (32%), Gaps = 4/172 (2%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            + E++      +  +  I   +    ++ +  +    +  + ++L ++      I    
Sbjct: 519 NSFESQQKWNQNQGNQSPIYQQSPQQNSIQSPKEIFPINSLQFNQLKQKPSQYPPISAVN 578

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
             +       ++K            + +L  +Q ++   K+  + +   K++        
Sbjct: 579 PVQKLYENSQKLK----EAQQNSQNEDLLNLRQELQNQTKKIQQDLQKMKEDMSNQQKET 634

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            ++  N +      I   I +IE  +  +++    ++    +  Q  +    
Sbjct: 635 DKKQLNALQSQERLIVNEIAKIENQIKQQLEDQKKALQQQQQQQQQLSPSKI 686


>gi|16329814|ref|NP_440542.1| DNA ligase [Synechocystis sp. PCC 6803]
 gi|1652299|dbj|BAA17222.1| DNA ligase [Synechocystis sp. PCC 6803]
          Length = 562

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/269 (7%), Positives = 71/269 (26%), Gaps = 31/269 (11%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           +H  +   ++++     + +L +  +    +L   L  +   ++ +R +L +L   +  N
Sbjct: 116 QHQLAHYDDIQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRN 175

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
            ++     Y   N      +       + + R    + Q + +    +        ++++
Sbjct: 176 QQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQ 235

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH------KIKSCHTSVSITTRILQSF 452
           +        Q          +++  + R+            ++ +    +    + L   
Sbjct: 236 VQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALA 295

Query: 453 A-YKNT-LKRGYTSIQDTNNNFITQ-----KRNLATKTRILINF-------------FDG 492
                  L+           + +          L +    +                  G
Sbjct: 296 NAELKVKLE-----TTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQENLAKAKG 350

Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREK 521
           +  + V  K         +     +    
Sbjct: 351 EPPSEVPEKTKAVATAPAQEAPVVSPSPP 379


>gi|297474366|ref|XP_002687237.1| PREDICTED: protein tyrosine phosphatase, receptor type, f
           polypeptide (PTPRF), interacting protein (liprin), alpha
           2-like, partial [Bos taurus]
 gi|296487994|gb|DAA30107.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2-like [Bos taurus]
          Length = 880

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             + +    V  +G    + +          ++  +    D          +++L    +
Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281

Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
             + +     +  + S +G    E +    D        T           ++      I
Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
               +      R      +  + L   L N +  L     +  +L   LE   + +    
Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405
                               +   +   E  Q I  + K   R+    E+   +      
Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           + Q   R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497


>gi|161055|gb|AAA29914.1| paramyosin [Schistosoma mansoni]
          Length = 439

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 52/180 (28%), Gaps = 5/180 (2%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD----QTLSCSRYRLDRLP 332
             E     +          +  L       L    + L +      +T+      +  + 
Sbjct: 160 DAEEALHDMDQKYQASQAALNHLKSEMEQRLRERDEELESLRKSTTRTIEELTVTITEME 219

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
            + +  L  +  R   +   +  ++ +    +         L ++    +      R + 
Sbjct: 220 VKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRVKDLETFLDEERRLR 279

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
              +  + I    R Q  N I  + + ++ L  R+      +++   + VS  T  L   
Sbjct: 280 EAAENNLQITEHKRLQLANEIEEIRSTLENL-ERLRKHAETELEEAQSRVSELTIQLNIL 338


>gi|73998474|ref|XP_863878.1| PREDICTED: similar to Serine/threonine-protein kinase 10
           (Lymphocyte-oriented kinase) isoform 5 [Canis
           familiaris]
          Length = 951

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                  +   +  E       +R    K               + +   +  LD   ++
Sbjct: 634 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 693

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 694 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 747

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                    M R Q   R       +++   R+   L ++       +
Sbjct: 748 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 787


>gi|319651827|ref|ZP_08005952.1| DNA polymerase III subunit alpha [Bacillus sp. 2_A_57_CT2]
 gi|317396479|gb|EFV77192.1| DNA polymerase III subunit alpha [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R       A+ SL D    ++A+++    N+      +G      G+I       
Sbjct: 769 EVKKIRTKKGEPMAFLSLSDQTGDMEAVVFPKVFNRFSMQCSQGSIVFAEGRIE--ERDG 826

Query: 100 KYQIIIESLIPSGSGTLLTALEKRKKK 126
           K Q+I++ L       +  A+EK + K
Sbjct: 827 KKQLIVQHLD-----DVKEAIEKMQNK 848


>gi|297296250|ref|XP_001105580.2| PREDICTED: stAR-related lipid transfer protein 9 [Macaca mulatta]
          Length = 4520

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 52/197 (26%), Gaps = 9/197 (4%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D   DL A        +    +   +    + +   +       + +       ++ L 
Sbjct: 428 LDLDGDLTASRLGLFPLLWKEGRALEEQCDEDRQPPRDGETSHRAQIQQQQS--YVEDLR 485

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           +  Q L+        L  +     + I   +          + S           +  LE
Sbjct: 486 H--QILAEEIQAEKELEFDQSWISQQIKENQQCLLRE-ETWLASLQQQQQEDHVAEKELE 542

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
               ++  ++           +    +  L+   ++ +     +++    ++ F L   I
Sbjct: 543 ASVALDAWLQTDPEIQPSPFVQSQKRVVQLQLLRRHTLRAAERNVR--RKKVSFQLERII 600

Query: 436 KSCHTSVSITTRILQSF 452
                 +    + L+  
Sbjct: 601 --KKQRLLEAQKRLEQL 615


>gi|195145856|ref|XP_002013906.1| GL23139 [Drosophila persimilis]
 gi|194102849|gb|EDW24892.1| GL23139 [Drosophila persimilis]
          Length = 817

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/187 (5%), Positives = 40/187 (21%), Gaps = 4/187 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                 P     + +P     Q    ++    +  +  L  +        LK     +  
Sbjct: 535 HAATKMPPLPTAIPIPTTPRTQHQHSSVNTPKDAAMEELSTFAQLKAYVELKTESKPEHL 594

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L         L       + ++           +  +    L    +     +    Q  
Sbjct: 595 LDQRLEGQQTLSSSHPGAMLLLACVLVVVLLAGLAHVYRCELPWQRRGRPGQMRPHHQRQ 654

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
                    ++  +            +    +  +         + +  + + +++    
Sbjct: 655 FNESDDAHSFLNYQGSAGSTADPARLQ----KWHHSTRREAPYSSPLHNLQARELQREQN 710

Query: 441 SVSITTR 447
            +    +
Sbjct: 711 RLQRCQQ 717


>gi|163848943|ref|YP_001636987.1| hypothetical protein Caur_3413 [Chloroflexus aurantiacus J-10-fl]
 gi|222526896|ref|YP_002571367.1| hypothetical protein Chy400_3674 [Chloroflexus sp. Y-400-fl]
 gi|163670232|gb|ABY36598.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450775|gb|ACM55041.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 556

 Score = 38.2 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 6/100 (6%)

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            I++  Q +   ++ +              ++    +   L     +R   L   I +  
Sbjct: 179 MIEEVNQQLAALEEELANRQDLTPEQREELQQILRQLQEELARNPGDRQEAL-ADIAQAE 237

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFA-----YKNTLK 459
            R+   L  +      ++    R L+  +      + TL 
Sbjct: 238 MRLRQQLDPQTDLRQAALEQLARRLEQLSNDQTTPRPTLD 277



 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 10/122 (8%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN--IQKNRQHILEKQQHIEQIVKQHLRY 390
            +     +  +       N  +  ++ +         + R+ + +  + +++ + ++   
Sbjct: 166 MDRILAEQAAVAEMIEEVNQQLAALEEELANRQDLTPEQREELQQILRQLQEELARNPGD 225

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                 +       LR+Q   +       +++L  R+E + + +  +   ++    + L+
Sbjct: 226 RQEALADIAQAEMRLRQQLDPQTDLRQAALEQLARRLEQLSNDQ-TTPRPTLDQLRQQLE 284

Query: 451 SF 452
           S 
Sbjct: 285 SL 286


>gi|323526496|ref|YP_004228649.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001]
 gi|323383498|gb|ADX55589.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001]
          Length = 1172

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 49/384 (12%), Positives = 112/384 (29%), Gaps = 22/384 (5%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 629  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196
                              V +   +       L++ +        +  +   +I   + +
Sbjct: 686  AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745

Query: 197  LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254
            ++   E +   R +      R  G + +L   F D  +     + ++        + D  
Sbjct: 746  IHAQVEEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEALTTARGESRDLDRA 805

Query: 255  LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
              D  +AA   A              E  +    +LE     +     +     L   L 
Sbjct: 806  ATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865

Query: 313  ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 ++ L  +R  LD L  +L    E  +          +  ++       +++    
Sbjct: 866  IRAVKEEALHAARLELDDLTAKLRAADETRLST-----ERALQPLRDRINELQLKEQAAR 920

Query: 373  ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRIE 428
            +   +Q IEQ+    +    L+ K    +     +    RI      +  +       ++
Sbjct: 921  LNG-EQFIEQLAAAGVDEAELQAKLTPDMKPSYLQGEVTRINNAIIALGPVNMAALDELK 979

Query: 429  FILSHK--IKSCHTSVSITTRILQ 450
                 K  + S    ++     L+
Sbjct: 980  AATERKTFLDSQSADLTSAIETLE 1003


>gi|254414886|ref|ZP_05028650.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC
           7420]
 gi|196178375|gb|EDX73375.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC
           7420]
          Length = 292

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 9/142 (6%)

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
             L  +RY L +L  E  + +  +       +   +    +   +    ++   +L   +
Sbjct: 159 HRLQNNRYVLQQLTAEGRYWIPELELFLGIWYGTRLGLTSNW--LRWWDESGNLLLWSSE 216

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
             EQ      R    +++++        EQ + R        ++   R +  +++ ++  
Sbjct: 217 QAEQ-----ERQRAEQERQRAEQERQRAEQERQRAEQERQRAEQERQRAD-AVTNNLEQE 270

Query: 439 HTSVSITTRILQSFAYK-NTLK 459
                     LQ      NTL 
Sbjct: 271 RQRNQALIAKLQELGIDPNTLS 292


>gi|34533778|dbj|BAC86801.1| unnamed protein product [Homo sapiens]
          Length = 1173

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             + +L + L N    ++         R     RE +  L+              N  K 
Sbjct: 802 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 861

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +  +QQ  E+  +   + +      ++        Q + R+      
Sbjct: 862 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 920

Query: 420 IKKLITRIEFILSHKIKSCHT 440
           +     R      H ++    
Sbjct: 921 L----ERQRQAYQHDLERLRE 937


>gi|326772158|ref|ZP_08231443.1| trypsin domain-containing protein [Actinomyces viscosus C505]
 gi|326638291|gb|EGE39192.1| trypsin domain-containing protein [Actinomyces viscosus C505]
          Length = 622

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            I D   + IT    +A  ++I +   DG+  +A      P  +
Sbjct: 340 VIFDKEGHIITNNHVVAGASKIQVTLADGRVYDAETTGTDPATD 383


>gi|325184393|emb|CCA18884.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 1013

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/181 (9%), Positives = 51/181 (28%), Gaps = 9/181 (4%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-DRLPR 333
           +  + +     + L  +    I    + K        +        L     R    L  
Sbjct: 151 MENRVNELEHEVELRDQREKEIQHQYQVKRMEFLQGQEQWKAQMDDLERQYDRTIQELED 210

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN--IQKNRQHILEKQQHIEQIVKQHLRYI 391
               +L+ +   +        +      +      +  +  +   +  IE + ++ + Y+
Sbjct: 211 ANAKSLQQMQTIEQLRVESAQDTRARVDMECKAVTEHWQAQLKPLRNEIESLSQEKINYM 270

Query: 392 FLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              ++      H L +    K +I    T ++         ++  ++     +S     L
Sbjct: 271 NERQRLVAENQHRLMQSENEKQQIQDQFTKLQYEY----QHVTRDLEQAKHRLSSLENAL 326

Query: 450 Q 450
           +
Sbjct: 327 K 327


>gi|325067522|ref|ZP_08126195.1| 2-alkenal reductase [Actinomyces oris K20]
          Length = 365

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            I D   + IT    +A  ++I +   DG+  +A      P  +
Sbjct: 83  VIFDKEGHIITNNHVVAGASKIQVTLADGRVYDAETTGTDPATD 126


>gi|195472759|ref|XP_002088666.1| GE11346 [Drosophila yakuba]
 gi|194174767|gb|EDW88378.1| GE11346 [Drosophila yakuba]
          Length = 8015

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +        L ++  +  ++
Sbjct: 7331 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7390

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7391 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7449

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7450 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7509

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7510 VSKDLEEIEQVFRRISQLQDKLNALHDQLQSV 7541


>gi|119493201|ref|ZP_01624076.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106]
 gi|119452766|gb|EAW33943.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106]
          Length = 800

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 52/176 (29%), Gaps = 2/176 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD-RLPRE 334
            ++   Q +   LE   + +     + +   +             +       +    + 
Sbjct: 492 QLQSDYQHNQAELEQTHSQLHQSQTELEQLKIQHNQIIEEWEKSKIQVQTVHKELETSQT 551

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               L+  + +   H   +  +++   +     + +    + Q    Q   Q L+    E
Sbjct: 552 HSQKLQTELEQSQTHSQQLQTQLEESQVQSQQLQTQLKDSQTQLKDSQTHSQQLQTQLEE 611

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            +     L    EQ++     L T +++  T     L  +++   T        L+
Sbjct: 612 SQTHSQQLQTELEQSQTHSQQLQTQLEESQTH-SQQLQTELEQSQTHSQQLQTQLE 666


>gi|308161701|gb|EFO64138.1| Liver stage antigen-like protein [Giardia lamblia P15]
          Length = 1810

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 68/202 (33%), Gaps = 22/202 (10%)

Query: 277  VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY---RLDRLPR 333
              +    + +++E R+  +  +L K     +      L   +Q L+  +    + +RL  
Sbjct: 1204 STDPFSYASLDIERRIKEMKAQLEKEMAEKIALEHADLNALEQELAAKKLSTLQAERLLN 1263

Query: 334  ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
             +  +    +  + R FN  ++  + + L+   Q        + Q    + +Q       
Sbjct: 1264 TVASDTVARLDDEDRLFNESMDAKRQELLLLKEQYGLMRHQNESQRALHLEEQVKAEKLA 1323

Query: 394  EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-------------------EFILSHK 434
               E++A L   + + + +I +      K  +++                      L  +
Sbjct: 1324 RLIEQVAELAEKKHKLERKIAHESKEFHKKESKLVASNSKGALKALRKEHAKEHEALETQ 1383

Query: 435  IKSCHTSVSITTRILQSFAYKN 456
            + S    +    + L++ + + 
Sbjct: 1384 LASISEQLRKAKKQLKALSPQK 1405


>gi|297578815|ref|ZP_06940743.1| GGDEF family protein [Vibrio cholerae RC385]
 gi|297536409|gb|EFH75242.1| GGDEF family protein [Vibrio cholerae RC385]
          Length = 372

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 8/186 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
              +E+       LQ     L            + +       + AL + ++ +   R  
Sbjct: 29  NRYSELLSENHVSLQEIRTALFELSRYAEYHFKEEEQLMREVGISAL-HLEEHIQVHRTF 87

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           +  +        ++      +    +I+ +    L  +    RQ I        +     
Sbjct: 88  MSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA------IRSGMSA 141

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 E++EK A    L          +    ++L+  +   L  K+      +    R
Sbjct: 142 EEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTQQLYQVNR 200

Query: 448 ILQSFA 453
            L++ +
Sbjct: 201 QLEALS 206


>gi|301756234|ref|XP_002913949.1| PREDICTED: STE20-like serine/threonine-protein kinase-like
            [Ailuropoda melanoleuca]
 gi|281352089|gb|EFB27673.1| hypothetical protein PANDA_001804 [Ailuropoda melanoleuca]
          Length = 1242

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275  VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                   +   +  E       +R    K               + +   +  LD   ++
Sbjct: 925  FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 984

Query: 335  LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 985  IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1038

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                     M R Q   R       +++   R+   L ++       +
Sbjct: 1039 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1078


>gi|117926781|ref|YP_867398.1| diguanylate cyclase [Magnetococcus sp. MC-1]
 gi|117610537|gb|ABK45992.1| diguanylate cyclase [Magnetococcus sp. MC-1]
          Length = 442

 Score = 38.2 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 60/200 (30%), Gaps = 9/200 (4%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
           +  R    T   +     +      L      +   I +   +   TL  L K       
Sbjct: 64  SHERQAQLTRLQKELSKQRVPDLEKLNGDLQTITPWITQPPDWDRQTLAELDKPPAAFRT 123

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNIQKNRQHIL 374
            L  + + L      L  +L+    ++   +  + N +               + +  +L
Sbjct: 124 HLLNALHLLGEADPWLTEHLQHFPPQQEPTWKQLYNLLTELPNQELKRERRWNRQKADLL 183

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRIEFI 430
           +  Q + + + Q L+ +     E   +L  L++  +      +  +      L  R    
Sbjct: 184 QTLQRLAESLSQGLKDLGQAGGESETMLARLQQSPETVDLLELKQVLIQEADLFRRYAKR 243

Query: 431 LSHKIKSCHTSVSITTRILQ 450
           + H+++     +      L+
Sbjct: 244 VHHQLEQSSDRLQQAHNRLK 263


>gi|332022061|gb|EGI62386.1| hypothetical protein G5I_09272 [Acromyrmex echinatior]
          Length = 1500

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 8/210 (3%)

Query: 248  GHETD-WTLAD-YAADLRAPTPT-GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304
            GHE    T+AD   AD           E+ +                +   + +      
Sbjct: 842  GHEGLGKTMADRLLADRYDNNRAFREQEIRLQEHRMAAMQAAEHRLAVAAAVQQHHHRDR 901

Query: 305  NTLNSLLKALPNSDQTLS---CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            +    L+      +  L      +    RL    +H+ +     + +    +  R K   
Sbjct: 902  DRERDLVHLREKEEHRLHREKELQQLEHRLA-VQQHHQQREKDLQQQEHRLVQQREKDMH 960

Query: 362  LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYLHTHI 420
            + H     +Q   +  QH  ++     R   + +K   A      E      +       
Sbjct: 961  VEHARLSVQQAREKDIQHEHRLSVHQQREKEIHQKMVAAAAQREIEHEHRLAVQQQQQRE 1020

Query: 421  KKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            K++  +    +    K     +++  R   
Sbjct: 1021 KEMQQQERLAIQQHEKDVERRLAMQHRERD 1050


>gi|320105836|ref|YP_004181426.1| metal dependent phosphohydrolase [Terriglobus saanensis SP1PR4]
 gi|319924357|gb|ADV81432.1| metal dependent phosphohydrolase [Terriglobus saanensis SP1PR4]
          Length = 327

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 45  RGIHSSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQ 102
           R     G  Y   +L D     +A +W+   + +      G    V G+I  +    +YQ
Sbjct: 29  RDKKGGGGQYLALTLADKTGSFEARMWEDFADALNTC-SSGCYVKVQGRIDKY--QGRYQ 85

Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLEEGL 132
           I +  +  +    + TA  +   +     L
Sbjct: 86  ITLSKMRSAAESEIDTADFQPTTQYDIAAL 115


>gi|229525824|ref|ZP_04415229.1| GGDEF family protein [Vibrio cholerae bv. albensis VL426]
 gi|229339405|gb|EEO04422.1| GGDEF family protein [Vibrio cholerae bv. albensis VL426]
          Length = 372

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 8/186 (4%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
              +E+       LQ     L            + +       + AL + ++ +   R  
Sbjct: 29  NRYSELLSENHVSLQEIRTALFELSRYAEYHFKEEEQLMREVGISAL-HLEEHIQVHRTF 87

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           +  +        ++      +    +I+ +    L  +    RQ I        +     
Sbjct: 88  MSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA------IRSGMSA 141

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 E++EK A    L          +    ++L+  +   L  K+      +    R
Sbjct: 142 EEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTQQLYQVNR 200

Query: 448 ILQSFA 453
            L++ +
Sbjct: 201 QLEALS 206


>gi|322373155|ref|ZP_08047691.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150]
 gi|321278197|gb|EFX55266.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150]
          Length = 1177

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 63/211 (29%), Gaps = 20/211 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
           NL+ +   +   L + +        +     +   +  + +   L ++ E  L+    + 
Sbjct: 761 NLQDKAERLKAELTQMQSKREAINDRIEAIKEDKDTLGQQKQGLLDKQSELQLKERDLQA 820

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI---LH 403
              F           L   ++++   +      ++Q     L ++  ++ E I     L 
Sbjct: 821 ELRFAKTETNRLKADLSELMKESESLLALLNNQVDQNQSDRLPHLLAQRDEAIQRKDDLE 880

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRIL-QSF-------- 452
               + K ++      ++ L  R+    +    +    T +    R + QS         
Sbjct: 881 QSLVRAKIQVQDYEGQLEDLEERLAKAGNRNEDLIRQQTRLEEGERQISQSLRKFATQLA 940

Query: 453 -AYKNTLKRGYTSIQDTNNNFITQKRNLATK 482
             Y+ TL+     +       +     +   
Sbjct: 941 EDYQMTLE-----VAKGQTQVLVNVEQVRQN 966


>gi|320197727|gb|EFW72335.1| Phage tail length tape-measure protein 1 [Escherichia coli EC4100B]
          Length = 911

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   ++Q     + R +     L 
Sbjct: 392 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAEQNYQEQQKRRNAENAALN 451

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I +   +D  + +    R++    ++ +    K+       E  
Sbjct: 452 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 510

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 511 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 569

Query: 457 TLKR 460
            L R
Sbjct: 570 VLAR 573


>gi|312877418|ref|ZP_07737382.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795807|gb|EFR12172.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 212

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 4/57 (7%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           K+++  +    ++ + R+  +   +  +  R++  +  ++ +    +    + L + 
Sbjct: 26  KQRLDRVEERLDRVEERLDRVEKRLDAVEQRLD-AVEQRLDAVEQRLDAVEQRLDTL 81


>gi|301627401|ref|XP_002942860.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus
           (Silurana) tropicalis]
          Length = 513

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/204 (9%), Positives = 54/204 (26%), Gaps = 10/204 (4%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            D   P           + ++           +         ++  + +  L    +  +
Sbjct: 95  CDSPVPAAKSCLHCEASLCDYHVREHSRAAEHVLTDPTASFGHRKCSEHMELLRY-HCTE 153

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQ 378
             +C      +     EH +E +     +    + N +    L     + R Q + E  +
Sbjct: 154 DGACICATGLQSGEHKEHKVETVNEASKKKKEKLWNILLQLSLSRREAEIRAQRLQECSR 213

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            + Q        +    +     L  L ++    I +    +   +  +      +++  
Sbjct: 214 DVAQKAADETERVTALFRVIGERLEALEKRLLRDISWEQEKVSLQLNDLIQ----QLEIK 269

Query: 439 HTSVSITTRILQSF----AYKNTL 458
              +S   R ++           L
Sbjct: 270 KDELSGKIRHIEELCNMGDPLTVL 293


>gi|90660382|gb|ABD97496.1| cowpox A-type inclusion protein [Cowpox virus]
          Length = 1276

 Score = 38.2 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 23/171 (13%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419
           L   + + R +  E    ++  +    R +   ++         R  ++ +NRI YL   
Sbjct: 681 LERQLSECRGNTTEIS-RLQSRISDLERQLNDCRRNNENNADTEREMQRLRNRITYLERQ 739

Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
           +       E    +  +++     +    R L         KR      + N    T   
Sbjct: 740 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------NGNG---TSSE 784

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            +    R+     D + +  + +K   +     K +L   + +    Q  L
Sbjct: 785 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 832


>gi|261211055|ref|ZP_05925345.1| GGDEF family protein [Vibrio sp. RC341]
 gi|260840030|gb|EEX66630.1| GGDEF family protein [Vibrio sp. RC341]
          Length = 372

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 7/139 (5%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I 
Sbjct: 75  RHLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA 134

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
                  +           E++EK A    L          +    ++L+  +   L  K
Sbjct: 135 ------LRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEK 187

Query: 435 IKSCHTSVSITTRILQSFA 453
           +      +    R L++ +
Sbjct: 188 VIERTQQLYQVNRQLEALS 206


>gi|148244870|ref|YP_001219564.1| DNA polymerase III alpha subunit [Candidatus Vesicomyosocius okutanii
            HA]
 gi|146326697|dbj|BAF61840.1| DNA polymerase III alpha subunit [Candidatus Vesicomyosocius okutanii
            HA]
          Length = 1141

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 67/151 (44%), Gaps = 23/151 (15%)

Query: 11   DHP--EYSVSELSYHLKHIVESNL-----SHVCVRGEISGYRGIH-SSGH--AYFSLKDN 60
            +HP  EY+V++L  ++  ++ SN+       V V   IS  R     +G   A  +++D 
Sbjct: 949  NHPTNEYTVADL-KNINVVLPSNIVFRKNRDVRVLALISDLRYRSIKNGERIALITIEDG 1007

Query: 61   HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120
             + ++A+++  TL  +          ++ GKI       ++Q+++  +           +
Sbjct: 1008 SASLNAVVFTKTLTLVSNQLMTDEVVVISGKINK-DFRDQWQLVVNKIE---------NI 1057

Query: 121  EKRKKKLLE--EGLFSDQHKNPIPFIPKIIA 149
            E+ K    +  E L + +H++    + KI+ 
Sbjct: 1058 EQVKISYAKGFEVLLNTKHQSIFDKLIKILI 1088


>gi|33864877|ref|NP_896436.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus
            sp. WH 8102]
 gi|33632400|emb|CAE06856.1| putative chromosome segregation protein, SMC ATPase superfamily
            [Synechococcus sp. WH 8102]
          Length = 1203

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/229 (10%), Positives = 71/229 (31%), Gaps = 17/229 (7%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
              +   ++       +   +  + +      +    ++    +    Q L  + + L+RL
Sbjct: 890  HTSWREQQLQLQQQRSSLQQQQSDLQERFGEQRRARDAAEAEVGRQRQALQQAEWNLERL 949

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLR 389
              E E  +E            +   +         +     +   Q  ++  Q   + L 
Sbjct: 950  KEEREGLIEEQ-RSGAVRLQEMEQALPDPQPEIPEELRLAGLEALQADLQTIQQRMEALE 1008

Query: 390  YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-----------SC 438
             + +   E++  L     +   R+  L++  ++L+ RIE + + + +             
Sbjct: 1009 PVNMLALEELEALEQRLAELNERLEVLNSEREELLLRIETVATLRQEAFMEAFTAVDGHF 1068

Query: 439  HTSVSITT---RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484
                +  +     LQ     + L+ G T +       + +   ++   +
Sbjct: 1069 REIFASLSDGDGQLQLENPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1117



 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 48/168 (28%), Gaps = 3/168 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              +  L+           N+L +       ++  +  SR RL  +       LE    R
Sbjct: 352 NRRQDWLHQSRELEQDPHQNSLAAAEATCRGAEAAVEVSRRRLGDVAGRSGAWLEEQKRR 411

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
             R    +   +          + R     ++    Q  +Q         ++++  L   
Sbjct: 412 SGRR-QELQVALAPLLEEQQQLQERLRQDAERLTELQQEQQQDGNDEQAVQQRLEQLEQD 470

Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451
            +     +      +++    +  +     +++   T +      L+S
Sbjct: 471 WQALLQSLSSGKQALQQTADSLAIQQRTRSRLEQEQTRLEREIARLES 518


>gi|296109728|ref|YP_003616677.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus
           infernus ME]
 gi|295434542|gb|ADG13713.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus
           infernus ME]
          Length = 202

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 82  EGIEFLVIGKITTFPGSSKYQIIIESL 108
           EG    V GK++ +    +YQII+  +
Sbjct: 102 EGDYVEVKGKVSVY--KGRYQIILRDI 126


>gi|159896636|ref|YP_001542883.1| WD-40 repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889675|gb|ABX02755.1| WD-40 repeat protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1209

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 16/170 (9%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                   +    L+    RL    +EL + L   I R       + + +      H + 
Sbjct: 375 QHEELIFGDVRTILAQQFERLSDQEQELLYWL--AIERHTVKLAELKHDLVRSKYQHMLL 432

Query: 368 KN-----RQHILEKQQ-----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +      R+ ++E+ Q     H   +     R I    +E +     L  +         
Sbjct: 433 ETLESLLRRSLVERHQDGFMLHNVVLEYTTDRLIDQIAQELLDGTQGLLYRHALIKANSL 492

Query: 418 THIKKLITR--IEFILSHKIKSCHTS--VSITTRILQSFAYKNTLKRGYT 463
             I++  +R  +  +L            ++   ++LQ+    + L+ GY 
Sbjct: 493 DSIREHQSRAILRPLLHRIFVELGQERLLASLRQLLQTMQPLSALEMGYA 542


>gi|89057725|ref|YP_512179.1| lipopolysaccharide biosynthesis [Jannaschia sp. CCS1]
 gi|88866279|gb|ABD57155.1| lipopolysaccharide biosynthesis [Jannaschia sp. CCS1]
          Length = 517

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 73/219 (33%), Gaps = 12/219 (5%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
                    + S  +         +      ++  +    N E +   + +         
Sbjct: 207 NRQALLQERIGSAERERATLQDQRARVIAIFEQTGQINSGNPETLSPEEQQLHAAEAELA 266

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
            +  +        Q +  + + + + +   +     E +   A     R  T+  +    
Sbjct: 267 NALTIFSETNPQVQLLQRQVERLREQIAAGIETGQEEGENDDA-----RSSTRTVLDLQL 321

Query: 418 THIKKLITRIEFIL---SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474
           T I   IT ++ ++     +++    ++S T     + +   +L+R Y +I+D  +  + 
Sbjct: 322 TQIDTQITALDTLIAETQQELQRLEDAISRTPSNAITLS---SLERNYENIRDQYDQAVA 378

Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513
           +  + +T  RI +    GQ  +++ +   P+   +    
Sbjct: 379 RLADASTGERIELT-SRGQRISLIESANVPRSPSSPDRP 416


>gi|332095406|gb|EGJ00429.1| hypothetical protein SB521682_0116 [Shigella boydii 5216-82]
          Length = 617

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 430 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQLQ 489

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372
           Q    +R R+     E    +   +    +  +       RI+S          +K +Q 
Sbjct: 490 QRREAARQRIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 549

Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            L +QQ     ++I         + +++           + + +   +     +  R+  
Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 610 RGARRLER 617


>gi|295108759|emb|CBL22712.1| Trypsin-like serine proteases, typically periplasmic, contain
           C-terminal PDZ domain [Ruminococcus obeum A2-162]
          Length = 502

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 16/81 (19%)

Query: 463 TSIQDTNNNFITQKRNL-------ATKTRILINF--FDG----QANAIVI---NKAPPKE 506
           + I + +   +     L            + +     DG    +    V    NK     
Sbjct: 391 SIITEFDGKRVRSIDELVSRLEYYEPGEEVEVTLEVADGGEYKEKTVTVTLGENKDTDSN 450

Query: 507 QPTKKCQLHNNKREKQGTQGE 527
           + +K      +  E    QG+
Sbjct: 451 KDSKDDSKDESDAEDSQDQGD 471


>gi|260827871|ref|XP_002608887.1| hypothetical protein BRAFLDRAFT_129932 [Branchiostoma floridae]
 gi|229294241|gb|EEN64897.1| hypothetical protein BRAFLDRAFT_129932 [Branchiostoma floridae]
          Length = 991

 Score = 38.2 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/174 (9%), Positives = 51/174 (29%), Gaps = 3/174 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             ++ Q        R    +   +  +   +           + L+  + R   +  + +
Sbjct: 559 HMKNFQERQDGERERQREQLDAKLAQRRRKMEEQSATSQAEQKMLNDQQERAITMLLDTQ 618

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L     ++    +       ++ L  +  + ++ + +K       ++   +    EKK
Sbjct: 619 AGLTEEARKQIMKEHEQNMIAVNNQLQISRTRQQKILEQKLAQRRAKLEAKTKAKQDEKK 678

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                   + +Q +         + +L  R+       +K+    +      LQ
Sbjct: 679 MLEEEYEEMVQQLE---EERQQALTELRKRLAEETDQALKAQDEQLGKVIARLQ 729


>gi|297690339|ref|XP_002822578.1| PREDICTED: centrosomal protein of 164 kDa-like isoform 2 [Pongo
           abelii]
          Length = 1454

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 785 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 840

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 841 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 900

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 901 LETVRQEQHKRLEDLRRRHREQERKLQDL 929


>gi|297666364|ref|XP_002811499.1| PREDICTED: forkhead-associated domain-containing protein 1-like
           [Pongo abelii]
          Length = 1010

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 5/237 (2%)

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
           S ++    N E +  ++ +    +  +          D    L+   P    +  V    
Sbjct: 126 SKQEETTENIEKLRTSLDSCQACMKMSCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVL 185

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
               S +    +L   +           +  L  L    + L      L       +   
Sbjct: 186 RHSLSWLEEVEQLLQDLGISRSSPNKGFSLYLINLLEHYKKLMSQAQELQIKFNSSQETQ 245

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIH--NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
           + ++  K R       ++  + L      +   + + E++  +E+ + Q         +E
Sbjct: 246 QSLLQEKLREHLAEKEKLNEERLEQEEKHKAKIRQLTEEKAALEECITQERNRAKETLEE 305

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL---SHKIKSCHTSVSITTRILQS 451
           +   +  L      +   L   I +   R++  L     +++     ++    +L+S
Sbjct: 306 ERKRMQELESLLAQQQKALAESITQEKNRVKEALEVEQTRVQELEKRLARQKEVLES 362


>gi|327289646|ref|XP_003229535.1| PREDICTED: apolipoprotein A-IV-like [Anolis carolinensis]
          Length = 425

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 19/250 (7%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII-RLIKYKINTLNSLLKAL 314
           AD  AD+     +     A         +   +  +LN++    L       L    + +
Sbjct: 81  ADQVADVVWSYFSQLGNNAKEAVAGQIPTSTEISQKLNSLFQDNLDTVSAYALELQKQVV 140

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
           P ++Q          +L  +L   L+ +  R       +  ++        IQ  +  + 
Sbjct: 141 PFAEQLHGRMAEDSQKLKEQLREELDQLRARITPRAEEVRQQM-----TGAIQNLQAQLG 195

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              + +   V    R     ++    +   +R + +  +  LH  +     R++  +  +
Sbjct: 196 PYAEELRSQV---NRNAAELRQGLEPLAEEMRAKLQENVGDLHGALSPYADRLQQRIEAQ 252

Query: 435 IKSCHTSVSITTRILQSFAYKNTLK--R-GYT-SIQDTNNNFITQKR----NLATK-TRI 485
           + +   ++      L++ A   TL+  R G     QD       Q       +      +
Sbjct: 253 VGTLKAALDPYANKLKAEA-DRTLEELRAGLAPFAQDAQGQLNRQLEGLSFQMQKGIEEL 311

Query: 486 LINFFDGQAN 495
                +G  +
Sbjct: 312 RAKLSEGTLD 321


>gi|320160268|ref|YP_004173492.1| hypothetical protein ANT_08580 [Anaerolinea thermophila UNI-1]
 gi|319994121|dbj|BAJ62892.1| hypothetical protein ANT_08580 [Anaerolinea thermophila UNI-1]
          Length = 1423

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 60/221 (27%), Gaps = 20/221 (9%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE-------------ARLNNI 295
           HE   T++    DL + T +    +  P           L+                  +
Sbjct: 60  HEDWNTVSAILTDLLSITRSQQIVIIEPDGSIPVRVYTQLDLQPPPLPFIEKSLKNPEWV 119

Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355
           +    K       S + +L +    L+    R   L      +   ++         +  
Sbjct: 120 VWDAEKDIAWIGVSFIPSLSSPPVVLARQVNRSRSLGMLRATHQRNLMLSL---LTSLFI 176

Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
                 L+  I       LE      Q      R   L   E +  L  +  Q  +RI  
Sbjct: 177 GAVIYALVRIIGTKPLERLEALTASIQQGDWGKRAPSLPLYE-LDRLGKVFNQMLDRIQI 235

Query: 416 LHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSFA 453
            H  + ++   +E  +      ++  +  +      L+S  
Sbjct: 236 QHEQLTQINQNLELAIQASVASLQEANEQLRHRASQLESLN 276


>gi|149041630|gb|EDL95471.1| rCG58154, isoform CRA_a [Rattus norvegicus]
          Length = 436

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LEA     ++   ++    +    K +      L       D   R +           
Sbjct: 29  YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 88

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               +   + +       +   +          +  +     QQ + Q     L+     
Sbjct: 89  QLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 146

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 147 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDA 205

Query: 453 AYKNT-LKR 460
           +Y+   L+R
Sbjct: 206 SYQQVDLER 214


>gi|302524167|ref|ZP_07276509.1| conserved hypothetical protein [Streptomyces sp. AA4]
 gi|302433062|gb|EFL04878.1| conserved hypothetical protein [Streptomyces sp. AA4]
          Length = 364

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE--IIIFRKYRHFNHIINRIKSDFLIH 364
            + +   L  + +     + ++     ++   L     +    +  + + +R +   L  
Sbjct: 12  FDRMRNMLVRAAEVRESEQQQIFDALDDIYARLAPVDSLGAVRKRLSELPDRTEVGVLAE 71

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
            + +    + E Q +    +   +  I  +  +  A L    +    R   +   +  L 
Sbjct: 72  RLDEAMTRL-ESQDNAIAALTHAVESIVDKLAKPFAQLDGRLDGVAARFEGVAGRMDGLE 130

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457
            ++   +  ++      +      L+S   + T
Sbjct: 131 DKL-QNIHRRLDELGGHLDKQDAKLESL-PQAT 161


>gi|213691156|ref|YP_002321742.1| single-strand binding protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522617|gb|ACJ51364.1| single-strand binding protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457214|dbj|BAJ67835.1| single-strand DNA-binding protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 219

 Score = 38.2 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 20/59 (33%), Gaps = 3/59 (5%)

Query: 59  DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT--TFPGSSKYQIIIESLIPSGSG 114
           D  +  +    W+   +      ++G+  +  G++   ++      Q  +  +     G
Sbjct: 49  DGQALFMRCAAWRDLADHCVQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEIG 107


>gi|297690337|ref|XP_002822577.1| PREDICTED: centrosomal protein of 164 kDa-like isoform 1 [Pongo
           abelii]
          Length = 1459

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 782 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 837

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 838 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 897

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 898 LETVRQEQHKRLEDLRRRHREQERKLQDL 926


>gi|170589343|ref|XP_001899433.1| Liprin-alpha 2 [Brugia malayi]
 gi|158593646|gb|EDP32241.1| Liprin-alpha 2, putative [Brugia malayi]
          Length = 1190

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 8/196 (4%)

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI--KYKINTLNSLLKALPNSDQTLSC 323
                  M       LQ  L  LEA+  +   R+   + +          L + +  L  
Sbjct: 298 ATQKEGRMEQEQVNKLQHHLQELEAQREDQEARISTLESRYMGAQREATCLRDLNDKLEH 357

Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383
                D   R  E  +  +  R       +   +K    + +++   Q  +E     EQ 
Sbjct: 358 RLANKDAAVRLNEEKVRSLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQ- 416

Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
                +    E+  ++A     R     R        ++   R+   +   +   +  + 
Sbjct: 417 ----KQLSAEEQMNRLARQVEERSAELERAVQREKMNEEHNQRLSSTVDKLLSESNDRLQ 472

Query: 444 -ITTRILQSFAYKNTL 458
                 +Q+   KN L
Sbjct: 473 LHLKERMQALDEKNRL 488


>gi|1373041|gb|AAC52648.1| AT1-46 [Rattus norvegicus]
          Length = 472

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/207 (7%), Positives = 55/207 (26%), Gaps = 10/207 (4%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311
           D+ A  +        ++    +  +     +   +   ++           +        
Sbjct: 202 DFVAKQKEDLELAMKKLTAENRREICDKERDCLNKKQELLRDREAALWEMEEHQLQERHQ 261

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                        R+ L R   +    ++    R          + K+          + 
Sbjct: 262 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 321

Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +   ++ +         +Q  +     ++E+        +Q +     +   + +  + 
Sbjct: 322 RMAMYKKSLHINGAGSASEQREKVKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 381

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +  +   + + CH  V   T+ L++  
Sbjct: 382 MNELQQLQNEKCHLLVEHETQKLKALD 408


>gi|291405103|ref|XP_002719106.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform
           3 [Oryctolagus cuniculus]
          Length = 930

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
             +    +  + +E + +  + +          S  + L      L   +    +  R+L
Sbjct: 311 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 370

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +   + +               + +       + +  + + +    +      R      
Sbjct: 371 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 430

Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           + +++++    E  + ++         +++  R+       I+   +      + LQ   
Sbjct: 431 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 490


>gi|237713163|ref|ZP_04543644.1| recombination enzyme [Bacteroides sp. D1]
 gi|237721681|ref|ZP_04552162.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262409445|ref|ZP_06085987.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|229446821|gb|EEO52612.1| recombination enzyme [Bacteroides sp. D1]
 gi|229449477|gb|EEO55268.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262352657|gb|EEZ01755.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 487

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/147 (10%), Positives = 45/147 (30%), Gaps = 1/147 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
            +  L   L   ++     R R          + E           +I  ++        
Sbjct: 201 RMKMLHDELSQVNEKWQLERGRNVSETGARHRSTEEYRRYLSEECTNIEEQVVQHKKALA 260

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             K    + E++      +  +LR    EK+ +++ L    +  +     +    ++L  
Sbjct: 261 DLKVEISLAERRVKGLTSMVDNLRKAKAEKESQLSALERTLQSHQGDTATIIAERERLEK 320

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSF 452
            +   +  K++     +    + L++ 
Sbjct: 321 EL-ASIQTKLEDKQDKLRTADQQLEAL 346


>gi|260822731|ref|XP_002606755.1| hypothetical protein BRAFLDRAFT_82396 [Branchiostoma floridae]
 gi|229292099|gb|EEN62765.1| hypothetical protein BRAFLDRAFT_82396 [Branchiostoma floridae]
          Length = 744

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/172 (8%), Positives = 42/172 (24%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           +     + A  +   + +   +      LL             R  +  +       + +
Sbjct: 267 REHREAILAMEDMHRLAMEANEEQHEQVLLTREKEQALLTEEHRQAIMTMEDRHRLAMGV 326

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI---EQIVKQHLRYIFLEKKEK 398
              R  +      ++ +   L    ++       KQ  +   E+            K+  
Sbjct: 327 NEERHKQALQASKDQHEQVLLARENEQAVLTEEHKQAILAMEERYRHAMHATEEQHKQVL 386

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            A  +  +E     +      I  +  R    +          +  +   L+
Sbjct: 387 QARENENKEALLAIVGEHKKAIVTMEERHRLAMQASENRHKQELQASKEKLE 438


>gi|68383801|ref|XP_695006.1| PREDICTED: WD repeat-containing protein 67 [Danio rerio]
          Length = 1070

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNL------EIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
                 +       +R+ ++    L      + +     R         K   L+   ++
Sbjct: 674 KYPTFIVEYQSQERERIRQQEVEYLRERQEVQKLHAEAVRQQAEFEAWYKQQELLLQGEE 733

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
            R+ IL++++   ++ +Q  R   ++++ K+  L ++    +  + +     +  + R++
Sbjct: 734 QRRLILQEEE--SKLAQQRARLAAMKRELKVKELSLIDSSRRRFLKHQQDQRRVHLKRLD 791

Query: 429 FILSHKIKSCHTSVSITTRILQ 450
             +  K+       +   + ++
Sbjct: 792 DEIQRKMALRDQETAAAVQEVE 813


>gi|327278928|ref|XP_003224211.1| PREDICTED: LOW QUALITY PROTEIN: probable serine protease HTRA3-like
           [Anolis carolinensis]
          Length = 586

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522
            + +   + ++    +  + ++ +   DG    A + +     +  T K           
Sbjct: 319 IVTNA--HVVSSSSTVTGRQQLKVQLQDGDTYEAKIKDIDKKSDIATIKINPRKKLPALS 376

Query: 523 GTQ-GEL 528
             Q G+L
Sbjct: 377 IGQSGDL 383


>gi|302896802|ref|XP_003047280.1| hypothetical protein NECHADRAFT_54135 [Nectria haematococca mpVI
           77-13-4]
 gi|256728210|gb|EEU41567.1| hypothetical protein NECHADRAFT_54135 [Nectria haematococca mpVI
           77-13-4]
          Length = 455

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 60/176 (34%), Gaps = 2/176 (1%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
             V+  +  +   L+  +  +          +   L        Q +       +     
Sbjct: 221 QEVQREIAVAKAQLQEEIKELREMQEDMTKQSNERLAHEFATQRQAMEKQLKDANEAQAS 280

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           L+ +LE ++  K   +  ++   ++      +++ R+   E +Q  ++  ++       E
Sbjct: 281 LKISLETLLEEKTAEYEEMLK--RAQEEQRRMEEERKRKEEDEQKKQRAEQERRDKEIEE 338

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           KK +IA    + E+    +       ++L +R+  +L  + +            L+
Sbjct: 339 KKREIAEKKRILEEKTRILEEKKRKQRQLESRMRALLQEQEEMKRQQQEEQEAALR 394


>gi|300022462|ref|YP_003755073.1| efflux transporter RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524283|gb|ADJ22752.1| efflux transporter, RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 463

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 6/63 (9%)

Query: 466 QDTNNNFITQKRNLATKTRILI----NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521
           QD     I     + +   +++       DG   A+   K PP        Q H    + 
Sbjct: 339 QDEKQAVI--AEGVKSGDTLVVNGFGRLKDGATVAVSDGKTPPASADAPAKQRHRQGGKA 396

Query: 522 QGT 524
            G 
Sbjct: 397 AGD 399


>gi|307154953|ref|YP_003890337.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822]
 gi|306985181|gb|ADN17062.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822]
          Length = 1204

 Score = 37.8 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 95/290 (32%), Gaps = 23/290 (7%)

Query: 184  DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW---HFNDEMIVRAIANSS 240
             E  +++     +   L+      + DI    R  G  EDL      N E + +A +   
Sbjct: 737  KELSQKLTTFKQKERELQLQYAQHQKDI---ERLSGQKEDLNRQLWQNREELQQATSRLQ 793

Query: 241  -----IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295
                 IPI+    H+    LA+  A       +   E+   +K          +A     
Sbjct: 794  QLTQEIPILETQLHQEQQRLAELEASQTH---SQWLEIQAEIKATEVQLQQQEQAVRQAE 850

Query: 296  IIRLI-KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFN 351
                  + K   L   +       +        +D    E++  L   E  I    + F 
Sbjct: 851  ENAKDLQTKTQRLEEKILEAQQRIEGFHQQTLTIDEQKAEIQQQLLKSEANIAETEQLFQ 910

Query: 352  HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
             +  ++       +  +     L+ QQ   Q     L  +   ++E+ A L  L +Q +N
Sbjct: 911  QLTEKLGETKKERDRTEAALRSLQTQQ---QKTSWSLEKLLQTQQERKAALESLEQQLEN 967

Query: 412  RIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
            +   L   + +L   I  +  L+  ++   + +    + L++    N L 
Sbjct: 968  QRSELPEPLPELPETIMNQENLAQYLEQLQSEIKNGKKRLEAMEPVNMLA 1017


>gi|261378219|ref|ZP_05982792.1| SMC family protein [Neisseria cinerea ATCC 14685]
 gi|269145294|gb|EEZ71712.1| SMC family protein [Neisseria cinerea ATCC 14685]
          Length = 1161

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L  L   L    + L       +R         +      Y  +   +         H
Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              + +Q     Q          L+     +++ +  L   R   + +I  L   I+   
Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311

Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450
                  R +     +++  +         L+
Sbjct: 312 NLHQRIERDKQAAQAQLQRIYQEQQQIRVQLE 343


>gi|168334752|ref|ZP_02692880.1| putative multidrug efflux pump, membrane protein [Epulopiscium sp.
            'N.t. morphotype B']
          Length = 1192

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 55/193 (28%), Gaps = 5/193 (2%)

Query: 258  YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
               D +      A       +E LQ     LE     I     +          + L N 
Sbjct: 984  LILDKKEKRGKKARYQTTQDQEELQLERQQLEKEQFKIEYEREELLKQLQPIENEILQNK 1043

Query: 318  DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
            +         + +L    +   E  +    +       + +         ++ Q   E+Q
Sbjct: 1044 ESQ-ELQNREMQKLQEAQDLAEEQRVQAWQKLRREQEMQERQRQQDLQDGQDWQEQHEQQ 1102

Query: 378  QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
            +  EQ   + +  +   ++ +       R   K  +   +T   K +  ++      I+ 
Sbjct: 1103 RDQEQQKMEEMEDLHERQRIQDQR---KRRDLKELLDIRNTQKIKKLQELQKS-KEYIEQ 1158

Query: 438  CHTSVSITTRILQ 450
                +SI    L+
Sbjct: 1159 MLQKLSIREERLK 1171


>gi|119365083|sp|P85001|CE290_DANRE RecName: Full=Centrosomal protein of 290 kDa; Short=Cep290
          Length = 2439

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 76/255 (29%), Gaps = 32/255 (12%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D  +      A   +   +        +  +  N++ +  + +        + +    Q 
Sbjct: 1510 DSESQPTLKVAHQTINNLQGRLDQKEEVLKKYQNLLGKARQEQEEIAKRHEEEVRALHQK 1569

Query: 321  LSCS------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-----FLIHNIQKN 369
            L         R++   L    +  + +   +       +   +         L   ++  
Sbjct: 1570 LDVYMDTSLDRFKQTALELIKKPTITVPTSKHLVRLAEMEQTVAEQDNSLSSLSQKLKIV 1629

Query: 370  RQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIFYLHTHIKKLITR 426
             Q + +++Q    Q ++       LE K    +  L    E+ + ++  +   +  L T 
Sbjct: 1630 TQELDQQRQVTAAQAMEHAADMARLEDKHAAQMKGLSQEAEELRAQLIQMEKELHYLRTE 1689

Query: 427  IE-----------FILSHKIKSCHTSVSITTRILQSFAYKNTLK-RGYT-SIQDTNNNFI 473
            +E             + + ++     +++  + L++ + K  L+ R             I
Sbjct: 1690 LEAQKEANVRSPSNTMKNLVERLKNQLALKEKQLKALS-KALLELR--AELTSQAEQQII 1746

Query: 474  TQKRNLATKTRILIN 488
            T       +  + + 
Sbjct: 1747 TNAAQ--KEEALNVQ 1759


>gi|7500308|pir||T21636 hypothetical protein F32B4.3a - Caenorhabditis elegans
          Length = 1165

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/119 (8%), Positives = 40/119 (33%), Gaps = 1/119 (0%)

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
               +E      + +          +++ +        +   I    +  ++  +   R  
Sbjct: 935  RHWVEQLQRDEMDQMLHRLQFENKQLRKELEWKRGAASTMEIDRSSKRHQERHQSESRGG 994

Query: 392  FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
             L  +   +++ +   Q++N +      ++    R+E   S  ++  +  + +  + L+
Sbjct: 995  TLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQNEQLEMQLQRLK 1052


>gi|320036057|gb|EFW17997.1| hypothetical protein CPSG_05634 [Coccidioides posadasii str.
           Silveira]
          Length = 756

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/318 (9%), Positives = 84/318 (26%), Gaps = 6/318 (1%)

Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189
           EG+               +   ++     + +  Q       L + I  +    +   +E
Sbjct: 182 EGITDKNLIRLECQHRYCLKCFSTLVTTAMHNETQFPPRCCLLEIPIKVILHNLNNANRE 241

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249
           +        ++ E                G             V+      I I      
Sbjct: 242 LFKEKTHEFSIPEQDRWYCHSATC-----GKWIPPKKVKSGATVQKCPFCKIEICGMCRG 296

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
               +L D   D+        A++    +     +++ L +   ++I +       T  +
Sbjct: 297 PVHVSLLDCPGDIGLEATLEEADLCGWRRCPQCRAMVELISGCRHMICKCRAQFCYTCGA 356

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             +    ++         L     E     E+           I    + +      ++ 
Sbjct: 357 RWRTCQCTEVDQRRREEELQDRRFERNAAAELEARELADALAEIERLEQREAEEIVRREE 416

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            +   E+++  E+  ++ +      +  ++A+  + + Q    I         L   ++ 
Sbjct: 417 ARRRAEEEEAREREAQRMMAIAESTRNMRLALDRINKLQQTVLIKRHEADASSLQEELQD 476

Query: 430 ILSHKIKSCHTSVSITTR 447
            +  + +     +    R
Sbjct: 477 QVK-QFELRRQRLESALR 493


>gi|301102708|ref|XP_002900441.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262102182|gb|EEY60234.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1212

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/177 (9%), Positives = 52/177 (29%), Gaps = 6/177 (3%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD-----QTLSCSR 325
             +      +     +  L  +L +      +       S+ +           + L    
Sbjct: 998  LQQLCCDFDERLHEIEMLREKLADEKAHTTRVMRERDESVAQLAEQRRVLENLRRLDGVH 1057

Query: 326  YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV 384
                 L ++     +  + +   H N + +  +   +  NI  + R       +  E+ +
Sbjct: 1058 RSQLELLQKHILPKDRELVQMQEHLNQLHDANQEVVVQANISDRLRVEASSLARKQEREL 1117

Query: 385  KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
            +   + +   +   + +   L E  +       + I   I R+   ++ ++ +    
Sbjct: 1118 ETTSKRLERVRHSIVVLQEELGELVRRSAVQEKSAIVTEIGRLHKRMTRQLDALQAR 1174


>gi|307206052|gb|EFN84145.1| Nesprin-1 [Harpegnathos saltator]
          Length = 5147

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 60/255 (23%), Gaps = 39/255 (15%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330
             E   + + +  +         +    N      K LP     +   R   DR       
Sbjct: 3864 WEEYLTHVRDFLSSGVPGDYNGLSEYRNICEVHRKLLPEQQNLILTVRQEEDRDRSVAEQ 3923

Query: 331  ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
               L       L  I+ R     + I    K       +    + +  ++Q +       
Sbjct: 3924 FNALTNLHNETLARILERHTTVRDRISAWDKYRQDQGRLLTWLKEVERERQRMHLQFIHL 3983

Query: 388  LRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
             R   I    +  +  L     Q  +        +      +   +  +  +    ++  
Sbjct: 3984 KRLDKILQRIQALLDKLPSGEAQVGSLQEQQEYLLTDCDEALAVSIRMEHAASVQRIANL 4043

Query: 446  TRILQS----------FAYKNTLKRGYTSIQ---DTNNNFITQK------------RNLA 480
               L++             ++  + G   +          ++                L 
Sbjct: 4044 RAGLETWRDFVQRVQKLHAQHVEQSG--LVTATFREIGQALSSAFHAGPTSLSRTKEQLE 4101

Query: 481  TKTRILINFFDGQAN 495
            +   +     +GQ N
Sbjct: 4102 SLQHLRTRLAEGQRN 4116


>gi|281412313|ref|YP_003346392.1| metal dependent phosphohydrolase [Thermotoga naphthophila RKU-10]
 gi|281373416|gb|ADA66978.1| metal dependent phosphohydrolase [Thermotoga naphthophila RKU-10]
          Length = 336

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 55  FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            +L+D    + A+ W       +   +EG    V G++  F      QI +++
Sbjct: 52  MTLEDRTGTVRAVDW-YNAELNDQRLKEGTVVRVKGRVVFFENR--IQINLDN 101


>gi|86609420|ref|YP_478182.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557962|gb|ABD02919.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 1205

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 55/188 (29%), Gaps = 10/188 (5%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             + L     +LE R + +  +L  ++   L    +        +   + +L    R+ +
Sbjct: 487 ELQPLCERQASLEQRHSQLGEKLASFQALRLELKQRETEQEQGQVQLQQLQLQLRQRQAD 546

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                 I         +  ++         Q+  Q + E+           +R +  E +
Sbjct: 547 LERVAAIPALETQQERLQTQLSRIAAARQFQQELQALFEQGSDQLAQHHHSIRQLLDELE 606

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK---------SCHTSVSITTR 447
            +      L +    RI  + T    L  ++   +   ++              +S   +
Sbjct: 607 AQRHNYPQL-QSLWQRIPEVLTRSSALSQQLLQSIHQILQDLAPQTSEPQLRQQLSNIQK 665

Query: 448 ILQSFAYK 455
            L++    
Sbjct: 666 QLRTLQPL 673



 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/188 (7%), Positives = 52/188 (27%), Gaps = 22/188 (11%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP--RELEHNLEIIIF 344
             + +     ++     ++    +   L    + LS  +     L          E +  
Sbjct: 311 EKQQQQRLEWLKQRDALLSQKQHIENQLARLQEKLSQQQRWKQELEELTPQIQAQEELER 370

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           ++      +   +        IQ       E+ Q ++  V++  +     ++ ++     
Sbjct: 371 QQTYWTQQLNTLLHLHREWEQIQAEWTAHAERCQLLQSRVQEAEQAQATCRQHQLTYNRY 430

Query: 405 L-----------REQTKNRIFYLHTHIKKLITRI---------EFILSHKIKSCHTSVSI 444
           L             +T+  +      ++  + R+         +  +  K+++    +  
Sbjct: 431 LQLETLIAEQEALRRTRQTLLAQRETLQHQLHRLELQGSEYQQQLQIFQKMEAEKLELQP 490

Query: 445 TTRILQSF 452
                 S 
Sbjct: 491 LCERQASL 498


>gi|34327964|dbj|BAA31587.2| KIAA0612 protein [Homo sapiens]
          Length = 1810

 Score = 37.8 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 300 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 359

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 360 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 419

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 420 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 450


>gi|301629770|ref|XP_002944007.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus
           (Silurana) tropicalis]
          Length = 556

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/218 (8%), Positives = 58/218 (26%), Gaps = 2/218 (0%)

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
            IS     ++  +     D   PT          + +            +          
Sbjct: 91  FISCYLEPSETGIPCSYCDSPVPTVISCLHCEASLCDTHLRGHCQSAEHVLTEPTTSFMG 150

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +  ++++      +  +  +C             H +E++     +    +   ++    
Sbjct: 151 RKCSVHNEPLKY-HCCEDSACICASCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLSP 209

Query: 363 IHN-IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                ++  Q + E+++ +E+        +    +     L  L ++  + I      + 
Sbjct: 210 EREETERGAQRLQERRRKLEEKATIETERVTALFRGIREELEALEKRLLSDISRQKEELS 269

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
             +T +   L  K       +     +         L+
Sbjct: 270 LTLTELIQQLEIKKDELSRKIRHIEELCNMADPLTVLQ 307


>gi|2149320|gb|AAB58543.1| dystrobrevin isoform DTN-1 [Homo sapiens]
          Length = 743

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17]
 gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17]
          Length = 465

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 9/161 (5%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDF 361
              ++L   L  +      ++ ++D L  +L       + +  ++      +     +  
Sbjct: 157 QRRDALTSDLNAALAKQGDAQNQIDELTTQLTQATGQADTLTQQRDDLTATLTATQSAAN 216

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421
                 +NR   LEKQ           R    + +  +A     R+    +       + 
Sbjct: 217 AQQTDAQNRIAELEKQLAEANAALADARQEVRQHQSALASATEQRQSVAEQYQQAREQLA 276

Query: 422 KLITRIEFI------LSHKIKSCHTSVSITTRILQSFAYKN 456
               R +        L  ++     +       LQS +++ 
Sbjct: 277 LQQARSQSATETINVLEARMAQEKAATDNLQSRLQSLSHEK 317


>gi|114672736|ref|XP_512087.2| PREDICTED: dystrobrevin alpha isoform 11 [Pan troglodytes]
          Length = 743

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|42718005|ref|NP_001381.2| dystrobrevin alpha isoform 1 [Homo sapiens]
 gi|229462840|sp|Q9Y4J8|DTNA_HUMAN RecName: Full=Dystrobrevin alpha; Short=DTN-A; AltName:
           Full=Alpha-dystrobrevin; AltName:
           Full=Dystrophin-related protein 3
          Length = 743

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571


>gi|301626985|ref|XP_002942662.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus
           (Silurana) tropicalis]
          Length = 541

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 16/193 (8%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           Y  D   P  T  +   +                  + +      + +          + 
Sbjct: 91  YCTDCYFPNATACSTCLLCNVSLCYEHAREHRKLAEHELTAPTPSQRDRY-----CPKHP 145

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           +  L     +         + +      +    N   +  K + L   ++K      E +
Sbjct: 146 ELLLEYYCPQDGVCICASCYRVGEHRGHRVEPLNEETSEKKKEKLREVLEKLSPEREETE 205

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             I+++ ++       E K   A+   +R             ++ L  R+   +S + + 
Sbjct: 206 GQIQRLQERRREGAAGETKGVTALFRGIR-----------ERLEALEKRLLRDISREQEK 254

Query: 438 CHTSVSITTRILQ 450
               +    + L+
Sbjct: 255 VSRQLHCLIQQLE 267


>gi|301774711|ref|XP_002922771.1| PREDICTED: kinesin-like protein KIF20A-like [Ailuropoda
           melanoleuca]
 gi|281342955|gb|EFB18539.1| hypothetical protein PANDA_011785 [Ailuropoda melanoleuca]
          Length = 889

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 47/167 (28%), Gaps = 9/167 (5%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
            ++E   +  +    +                 + L       D +  E+   ++     
Sbjct: 546 DDIENEADISMYGKEELLQVVEAMKALLCKERQEKLQLEMQLRDEICNEMVEQMQQREQW 605

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
              H +     ++        +   + +   ++ +    ++ L+    + +E  A+LH  
Sbjct: 606 CSEHLDTQKELLE--------EMYEEKLKILKESLTSFYQEELQERDEKIEELEALLHEA 657

Query: 406 REQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQS 451
           R+Q             +   R+     + ++      +      L S
Sbjct: 658 RQQPVAPQQSGSELSLRRSQRLAASASNQQLHEVKAKLEQCRAELNS 704


>gi|291302592|ref|YP_003513870.1| PDZ/DHR/GLGF domain-containing protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571812|gb|ADD44777.1| PDZ/DHR/GLGF domain protein [Stackebrandtia nassauensis DSM 44728]
          Length = 614

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 3/46 (6%)

Query: 464 SIQDTNNNFITQ--KRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            + D   + IT       A+  ++ + F DG    A V+   P  +
Sbjct: 343 VVYDDKGHIITNNHVAETASGGKLEVTFADGTTSQASVVGTDPAGD 388


>gi|224046212|ref|XP_002196791.1| PREDICTED: similar to dystrobrevin, alpha [Taeniopygia guttata]
          Length = 739

 Score = 37.8 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/155 (9%), Positives = 47/155 (30%), Gaps = 10/155 (6%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L  +    +       +   +         +         F I   ++ RQ I 
Sbjct: 414 SSPARVLDSASRLDEEHKLIARYAARLAAETSSSQPSQQRGASDISFTIDANKQQRQLIA 473

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432
           E +    +I+++  R     ++         ++       +  L     +L  R+  +  
Sbjct: 474 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 533

Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
            + +     +    ++L++        +  +T+ R
Sbjct: 534 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 567


>gi|322785580|gb|EFZ12235.1| hypothetical protein SINV_00990 [Solenopsis invicta]
          Length = 1719

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/181 (9%), Positives = 53/181 (29%), Gaps = 2/181 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           E  +  +          ++     +   +    +   +L   +      +     + +  
Sbjct: 191 EKMLSEEVEKLRKEAEAKSGRCCALKAQLDSANDRFTNLQTHIATYKTQIKALEDKCNNY 250

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389
              +  + + I+  K           +++  + NI++ RQ + + +  +  E+ V Q  R
Sbjct: 251 SVTISKHEQSIMMLKDETLAAQSRLSRAEVQLDNIRQERQLLKDSETRLLKEREVFQRER 310

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +        +  +    E+ +               R    L  +++         T  L
Sbjct: 311 HSQALLYADVESIKASLERVQAEGQLRAEQRLDDANRECAALRRRLQEEQDRFRELTAHL 370

Query: 450 Q 450
           +
Sbjct: 371 E 371


>gi|307180375|gb|EFN68401.1| Citron Rho-interacting kinase [Camponotus floridanus]
          Length = 2946

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 13/203 (6%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEA--RLNNIIIRLIKYKINTLNSLLKALPNSD 318
              R      A E+A    +  Q  L  ++A     +  I  ++ ++      +  L  S+
Sbjct: 1639 HCRESRLNVALELAQNELKDCQEQLRTIQATLPARDAEIETLRKQLQEKAKQIDDLKTSE 1698

Query: 319  QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
            Q L+  + +L+R+  E E   + +   K      +IN  +S+ L  N+++  Q  +  Q+
Sbjct: 1699 QMLTSLQEQLERMNLENEQLKQQLEVTKSDLNETMINLEQSEALALNLEQAAQDKVTLQK 1758

Query: 379  HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------- 430
             ++  + +      L K   +  L    E +  ++   +  +K+L               
Sbjct: 1759 RLQDSLNKEEEQ--LRKVYNLEELLKRLEHSVTKLETENASLKELDQAQATNCAITDTKY 1816

Query: 431  -LSHKIKSCHTSVSITTRILQSF 452
             ++ KI      +    + LQ+ 
Sbjct: 1817 EVNAKIDHWQEKIEKLEQQLQAL 1839


>gi|302848217|ref|XP_002955641.1| centriole protein [Volvox carteri f. nagariensis]
 gi|300259050|gb|EFJ43281.1| centriole protein [Volvox carteri f. nagariensis]
          Length = 480

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 3/170 (1%)

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           +++    + +   +  L KAL ++   L   R RL  L  E +      I  +      +
Sbjct: 66  HVLEWEARKRAEEVRDLQKALSDAHNFLFDERQRLLALQAENDDLRLQEIQDRKTIQQLL 125

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
                +          +            +      ++ L+ +   A L+  ++    RI
Sbjct: 126 AGGPHAAQGPRQQPGQQGRGAAAAASSSAVPGPSTDHLLLQIESLHAQLNEQKQLAAERI 185

Query: 414 FYLHTHIKKLIT---RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
             L    +            L+ +++     +    + L++      L R
Sbjct: 186 AALQEDRRIREQEEEAHRRALTQQLEVATERLQRLEQQLRTTTKDYILGR 235


>gi|296234418|ref|XP_002807906.1| PREDICTED: LOW QUALITY PROTEIN: myosin-14-like [Callithrix jacchus]
          Length = 1991

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/238 (7%), Positives = 61/238 (25%), Gaps = 26/238 (10%)

Query: 276  PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
               +    S    +      + ++          + ++  + ++  + +R    RL    
Sbjct: 1666 EELKAQLVSAGQGKEEAVKQLRKMQAQMKELWREVEESRSSREEIFAQNRESDKRLKGLE 1725

Query: 336  EHNLE----IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
               L      +    +   + +  R+         +++   +L  +     +  + L   
Sbjct: 1726 AEVLRLQEVRLGASNFDEKDQLXGRLGQLEXELEEEQSNSELLNDRYRKLLLQVESLTSE 1785

Query: 392  FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
               ++   A     R+Q + +I  L   + +            I +  + ++     L+ 
Sbjct: 1786 LSAERSFSAKAESGRQQLERQIQELRGRLGEEDAGARARQKMTIAALESKLAQAEEQLEQ 1845

Query: 452  FAYKNTLKRGYTSIQDTNNNFITQKR--------NL----ATKTRILINFFDGQANAI 497
             + +  L              + +           +        ++      G     
Sbjct: 1846 ESRERILS----------GKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEKGNLRVK 1893


>gi|171906567|ref|NP_077729.1| peripheral-type benzodiazepine receptor-associated protein 1
           isoform b [Homo sapiens]
          Length = 1797

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437


>gi|168700440|ref|ZP_02732717.1| hypothetical protein GobsU_12992 [Gemmata obscuriglobus UQM 2246]
          Length = 1288

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/179 (8%), Positives = 44/179 (24%), Gaps = 9/179 (5%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
             +  E    +      + +   L      L    Q LS  R          E       
Sbjct: 261 DQVQSEREALDAERAAHEPRAQALRDGETRLAAQAQELSRQRDMFAADRDIFERERTTFE 320

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            +K      +            +  +R+ ++   +   +  +   +      + + A L 
Sbjct: 321 AQKAADAERLTAWEADLSTRERVVSDRETLVRAARDEFEAERARFQDDLARLERRTAALE 380

Query: 404 MLREQTKNRIFYLHTHIKKLITR---------IEFILSHKIKSCHTSVSITTRILQSFA 453
                   R   ++  + +L            +      +++S    +      L + +
Sbjct: 381 AAERAVAVRTQEVNVRLDQLKRDATEWEETVGLAAAEQERLRSEAERLDHQRTELDAQS 439


>gi|149179155|ref|ZP_01857724.1| CMP-binding protein [Planctomyces maris DSM 8797]
 gi|148842015|gb|EDL56409.1| CMP-binding protein [Planctomyces maris DSM 8797]
          Length = 323

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 56  SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
            L+D+   ++A +W   L +     + G      GK+  F      QII+  + P 
Sbjct: 39  DLRDSTGVVNARMW-NVLEERMQHFQSGNYVQAKGKVHLF--QGTLQIILTYIEPV 91


>gi|119621725|gb|EAX01320.1| dystrobrevin, alpha, isoform CRA_b [Homo sapiens]
          Length = 740

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 416 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 475

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 476 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 535

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 536 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 568


>gi|332848618|ref|XP_003315685.1| PREDICTED: LOW QUALITY PROTEIN: peripheral-type benzodiazepine
           receptor-associated protein 1-like [Pan troglodytes]
          Length = 1873

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|327357041|gb|EGE85898.1| hypothetical protein BDDG_08843 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 702

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +  +   L E  + R+      +K    R++     ++K+    +      L++
Sbjct: 8   RAELQRQLAEAIRARLEAKQERLKAQRARLK-AQRARLKAKQARLKAKQARLKA 60


>gi|291405099|ref|XP_002719104.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform
           1 [Oryctolagus cuniculus]
          Length = 898

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
             +    +  + +E + +  + +          S  + L      L   +    +  R+L
Sbjct: 305 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 364

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +   + +               + +       + +  + + +    +      R      
Sbjct: 365 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 424

Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           + +++++    E  + ++         +++  R+       I+   +      + LQ   
Sbjct: 425 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 484


>gi|269954670|ref|NP_001161739.1| centrosomal protein of 290 kDa [Danio rerio]
          Length = 2439

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 76/255 (29%), Gaps = 32/255 (12%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D  +      A   +   +        +  +  N++ +  + +        + +    Q 
Sbjct: 1510 DSESQPTLKVAHQTINNLQGRLDQKEEVLKKYQNLLGKARQEQEEIAKRHEEEVRALHQK 1569

Query: 321  LSCS------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-----FLIHNIQKN 369
            L         R++   L    +  + +   +       +   +         L   ++  
Sbjct: 1570 LDVYMDTSLDRFKQTALELIKKPTITVPTSKHLVRLAEMEQTVAEQDNSLSSLSQKLKIV 1629

Query: 370  RQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIFYLHTHIKKLITR 426
             Q + +++Q    Q ++       LE K    +  L    E+ + ++  +   +  L T 
Sbjct: 1630 TQELDQQRQVTAAQAMEHAADMARLEDKHAAQMKGLSQEAEELRAQLIQMEKELHYLRTE 1689

Query: 427  IE-----------FILSHKIKSCHTSVSITTRILQSFAYKNTLK-RGYT-SIQDTNNNFI 473
            +E             + + ++     +++  + L++ + K  L+ R             I
Sbjct: 1690 LEAQKEANVRSPSNTMKNLVERLKNQLALKEKQLKALS-KALLELR--AELTSQAEQQII 1746

Query: 474  TQKRNLATKTRILIN 488
            T       +  + + 
Sbjct: 1747 TNAAQ--KEEALNVQ 1759


>gi|195132935|ref|XP_002010895.1| GI21796 [Drosophila mojavensis]
 gi|193907683|gb|EDW06550.1| GI21796 [Drosophila mojavensis]
          Length = 1041

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 8/171 (4%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           +  +      +    N E     + +     K     +L     N  Q  +    R+ + 
Sbjct: 660 DRKLFDSTRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMIQA 719

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
            ++          R+      +++ ++   L   + K +Q + +    +   +K H +  
Sbjct: 720 QKQFVELEMRKFKRRRMI---LLHGLEDQLLRDELSKKQQQLEQAHAML---LKHHEKTQ 773

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440
            LE +++ ++  +  EQ   +      + K  + RI   L  K  ++    
Sbjct: 774 ELEYRQQKSVHQLREEQINKQHDTELHNQKDYMERITKELLRKHALELRQQ 824


>gi|194856553|ref|XP_001968775.1| GG25055 [Drosophila erecta]
 gi|190660642|gb|EDV57834.1| GG25055 [Drosophila erecta]
          Length = 8391

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 58/212 (27%), Gaps = 21/212 (9%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
                   + A          L       ++ +     R  +       +L ++  +  ++
Sbjct: 7707 HFNIQKLSHAIGNVQSQSSDLTLVNQQAQSLIRQADARNRQLIEQDNAALNRSWQDLVRS 7766

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L   R  L +L    +   E  +    +    + ++ ++       +++ +      Q +
Sbjct: 7767 LEQRRDSLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7825

Query: 381  E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432
                  +K   + I    K  +  L  + + +   I      + +   ++   L      
Sbjct: 7826 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7885

Query: 433  ------------HKIKSCHTSVSITTRILQSF 452
                         +I      ++     LQS 
Sbjct: 7886 VSKDLEEIEQVFRRISQLQDKLNALHDQLQSV 7917


>gi|152012816|gb|AAI50280.1| BZRAP1 protein [Homo sapiens]
 gi|208967661|dbj|BAG72476.1| benzodiazapine receptor (peripheral) associated protein 1
           [synthetic construct]
          Length = 1797

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437


>gi|119614875|gb|EAW94469.1| benzodiazapine receptor (peripheral) associated protein 1, isoform
           CRA_b [Homo sapiens]
          Length = 1797

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437


>gi|119602251|gb|EAW81845.1| protein phosphatase 1, regulatory (inhibitor) subunit 13B, isoform
           CRA_a [Homo sapiens]
          Length = 957

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/219 (7%), Positives = 56/219 (25%), Gaps = 21/219 (9%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           L D AA  +         +    +            + +      ++     + +    L
Sbjct: 131 LQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKL 190

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                             + +  NL   I R    F      +++  L   + +  Q + 
Sbjct: 191 KKIRAM-----RGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 243

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430
           + ++      + +   +      ++  L+   +         ++ +++    +       
Sbjct: 244 DLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEV 303

Query: 431 --LSHKIKSCHTSVS----ITTRILQ----SFAYKNTLK 459
             +  +I      +          L     + + ++ L 
Sbjct: 304 AMMDKRISELRERLYGKKIQACEKLNRVNGTSSPQSPLS 342


>gi|57999440|emb|CAI45931.1| hypothetical protein [Homo sapiens]
          Length = 2039

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNKLMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|3043566|dbj|BAA25447.1| KIAA0521 protein [Homo sapiens]
          Length = 1050

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             + +L + L N    ++         R     RE +  L+              N  K 
Sbjct: 679 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 738

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +  +QQ  E+  +   + +      ++        Q + R+      
Sbjct: 739 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 797

Query: 420 IKKLITRIEFILSHKIKSCHT 440
           +     R      H ++    
Sbjct: 798 L----ERQRQAYQHDLERLRE 814


>gi|261202654|ref|XP_002628541.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239590638|gb|EEQ73219.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 720

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +  +   L E  + R+      +K    R+      ++K+    +      L++
Sbjct: 8   RAELQLQLAEAIQARLEAKQERLKAQRARL-QAQRARLKAQRARLKAKQARLKA 60


>gi|217964278|ref|YP_002349956.1| DNA polymerase III subunit alpha [Listeria monocytogenes HCC23]
 gi|217333548|gb|ACK39342.1| DNA polymerase III subunit alpha [Listeria monocytogenes HCC23]
          Length = 1108

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|148548924|ref|YP_001269026.1| SMC domain-containing protein [Pseudomonas putida F1]
 gi|148512982|gb|ABQ79842.1| SMC domain protein [Pseudomonas putida F1]
          Length = 1214

 Score = 37.8 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/199 (9%), Positives = 55/199 (27%), Gaps = 9/199 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL---KALPNS 317
           DL    P  A +       +   +L    A+    + +    +           K     
Sbjct: 772 DLAGVLPEEALKALNDDPANAFLALDQQIAQRLQQLEQRKDEQEEQQARQAQLDKLRDQQ 831

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
              +   +     L    E   +           H         +   +++ R    +  
Sbjct: 832 QARVQGLQQLQHTLAALDEQRQQAQTSLGELLGEHASAEACQQHMEATLEQARALDADTA 891

Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFIL 431
           Q ++ +  Q ++     K   ++   L    +Q + +I    +   +L    + R+  + 
Sbjct: 892 QRLQDLRTQGVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMD 951

Query: 432 SHKIKSCHTSVSITTRILQ 450
             ++      +    + ++
Sbjct: 952 DAQVNELRQRLQGAEKAIE 970


>gi|326434950|gb|EGD80520.1| hypothetical protein PTSG_01111 [Salpingoeca sp. ATCC 50818]
          Length = 1133

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 27/96 (28%), Gaps = 1/96 (1%)

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
            N +         +     I   QQ  ++  K          + +   +     + + RI
Sbjct: 208 SNPLMQPPPHICSRGRVHIINFLQQEKQRAAKATQDLQASAAQARDVDVEDASAKEQERI 267

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                 + +   R++  +  +++     +      L
Sbjct: 268 NEREKQMAEEAQRLQQ-MRAQLEQKEQELQAAQERL 302


>gi|322492254|emb|CBZ27528.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 866

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/165 (7%), Positives = 43/165 (26%), Gaps = 2/165 (1%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
               +       + R  +        L   L  + + L   + + +   RE       ++
Sbjct: 21  QQARMSEETCAELRRRCQGLETEKQGLRLELQQAQERLQARQAQTEEQRREAAEAKLTVL 80

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--QHLRYIFLEKKEKIAI 401
                         ++   +       +    + Q ++  +   QH + + L++   +  
Sbjct: 81  SLTAERDELSAKVQEAWDRVAEFSAALRRQETEMQRLQAGITTAQHSKELTLQQHSHMEQ 140

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
              + ++                 R+   L   ++     +S   
Sbjct: 141 QLRILQEQLRVHETDEHANAAARQRLSAALQSALERLAELLSNVA 185


>gi|307571155|emb|CAR84334.1| dnaE [Listeria monocytogenes L99]
          Length = 1095

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 951  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1008

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1009 ELQLIINKAE 1018


>gi|291405101|ref|XP_002719105.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform
           2 [Oryctolagus cuniculus]
          Length = 906

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
             +    +  + +E + +  + +          S  + L      L   +    +  R+L
Sbjct: 311 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 370

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +   + +               + +       + +  + + +    +      R      
Sbjct: 371 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 430

Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           + +++++    E  + ++         +++  R+       I+   +      + LQ   
Sbjct: 431 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 490


>gi|290894457|ref|ZP_06557416.1| DNA polymerase III [Listeria monocytogenes FSL J2-071]
 gi|290555995|gb|EFD89550.1| DNA polymerase III [Listeria monocytogenes FSL J2-071]
          Length = 1108

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|260796647|ref|XP_002593316.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae]
 gi|229278540|gb|EEN49327.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae]
          Length = 1260

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/182 (8%), Positives = 52/182 (28%), Gaps = 9/182 (4%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
             + V  +            R  +   ++++ + +T  +  + L    + L+     +  
Sbjct: 361 KAIRVESERDQLLQQAEALQREVDNFNQMLETERSTFRAQEEELQKQLELLTEKHQEVVD 420

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             +   H          +  +   N I    +  N     +  L+ +  +++      R+
Sbjct: 421 QEKAAVHAESQKAQEHQKALSSAHNEIGQLKMELNAANRDKENLKMELSLQEA-----RF 475

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK----SCHTSVSITT 446
              + K +         +   ++   H  + +   R+      +I+         +    
Sbjct: 476 EASQSKLESEYQAEQERKMSQQLSEAHDQLTQTEERLREQHRRQIQEVADRHRQDLDTHM 535

Query: 447 RI 448
           + 
Sbjct: 536 KQ 537


>gi|114658386|ref|XP_001151672.1| PREDICTED: golgi autoantigen, golgin subfamily a, 6 isoform 1 [Pan
           troglodytes]
          Length = 712

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 53/180 (29%), Gaps = 14/180 (7%)

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
                  K+ I+ +  L ++L      ++  R+            L+    +  +    +
Sbjct: 255 RPWKEEKKHDIHRIQELERSLSELQNQVAEPRFPAPPAGTSELEQLQDEAKQLRKEVEGL 314

Query: 354 INRIKSD-------FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
             ++ S         L+   Q  R    E+++  EQ           E+++++       
Sbjct: 315 EGKLPSQVENNQTLSLLSKEQNERLQEQEERRVREQERLCEQNERLQEQQKRLGEQGERL 374

Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH------TSVSITTRILQSFAYKNTLKR 460
            + + R+      ++K   R+                    +      L + +  + L +
Sbjct: 375 RKQEQRLQKQEERLQKEEERLRKQEERLWDQEKRLWDKEERLQKQEERL-TLSQNHKLDK 433


>gi|118371099|ref|XP_001018749.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89300516|gb|EAR98504.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1823

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
                   A  +   + +   ++  N   R+ ++   + + + N LN   +      + +
Sbjct: 712 RYYQAKNEAEMLLEKLHQAKLANATNERNRIQSLENEIEQLRQNQLNIYSEE----GKLI 767

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQH 379
              + + + L ++  H  +++   + +    +  +  +    L   I+K +    E +Q+
Sbjct: 768 QQYKKQNEDLTKKYNHLQKLLEENEKQKLEDLKKQQDAHQKELQEKIEKEKLEQKEPEQN 827

Query: 380 IEQIVK----QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           ++ +V+       +  +  KK+K   L    +     +  +         +I   L+ +I
Sbjct: 828 LQPVVQDIESNRYKMKYEAKKQKYKNLKTEMKNMYEELKQMTQENIDNNQKIN-SLNQQI 886

Query: 436 KSCHTSVSITTRILQSF 452
           +  +  +    + L   
Sbjct: 887 QHYNHQLQQANQQLHLL 903


>gi|34535742|dbj|BAC87417.1| unnamed protein product [Homo sapiens]
 gi|109731129|gb|AAI13713.1| FLJ46536 protein [Homo sapiens]
 gi|313882966|gb|ADR82969.1| RUN and FYVE domain containing 4 (RUFY4) [synthetic construct]
          Length = 398

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            + ++ +L +Q+   Q +++ L     E+ E  A L   +++ + R       +      
Sbjct: 256 AQRQEQLLREQEGELQALREQLSRCQEERAELQAQLEQKQQEAERRDAMYQEELGGQRD- 314

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453
           +   +  ++           + LQ  +
Sbjct: 315 LVQAMKRRVLELIQEKDRLWQRLQHLS 341


>gi|297302892|ref|XP_001119791.2| PREDICTED: involucrin-like, partial [Macaca mulatta]
          Length = 376

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 58/180 (32%), Gaps = 6/180 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
             +E     L + E +L     +  + K        LK L + +  L     ++ +L   
Sbjct: 47  EQQEGQLKHLEHQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQEVQLDLPEQQVGQLKHM 106

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +   +  +    +    + +  +    + ++++ +  +   +Q   Q+     +   L+
Sbjct: 107 EQQVEQ--LKHLEQQEEQLEHLEQQKGQLEHLEQQKGQLEHLEQQEGQVEHLEQQEGQLK 164

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
             E+        EQ + ++      + +L   +E        ++     +      L+  
Sbjct: 165 HLEEEKGQLKHLEQQEGQLELPEQQVGQL-KHLEQQEEQLEHLEQQKGQLEQQEGQLEHL 223


>gi|194212722|ref|XP_001502736.2| PREDICTED: similar to centrosomal protein 164kDa [Equus caballus]
          Length = 1404

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/149 (8%), Positives = 48/149 (32%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   +E     E    +K          +         +
Sbjct: 771 AKHRQVVSSLQKKMEEAQQKEEAQLQESLGRAEQRAQQKVHQVLEYEQELSGLLREKRQE 830

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
             R+H    ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 831 VEREH----ERKLDKMKEEHRQVVAEAREQYEAEERKQRAELLGHLTGELERLRRAHERE 886

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 887 LETMRQDQDRQLEDLRRRHREQERKLQDL 915


>gi|209525347|ref|ZP_03273888.1| conserved hypothetical protein [Arthrospira maxima CS-328]
 gi|209494198|gb|EDZ94512.1| conserved hypothetical protein [Arthrospira maxima CS-328]
          Length = 688

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/244 (9%), Positives = 70/244 (28%), Gaps = 32/244 (13%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            D        A    +       S+ ++   R      + I +   +++     L   + 
Sbjct: 350 CDRLKSWLNKAGMADIEETAIRMSTQVDDVDRQLAEFWQEIDHHQISISKNRAELSQIET 409

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
            L   + +L   P E    L+  +         +   + S+     I+   Q   +  + 
Sbjct: 410 RLDDIKKKLRNFPDEDIQKLQKRLDEIESSIGELNREMGSNS--QQIETLTQECEKLSKQ 467

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439
           I++     ++ I  +++                       + +++ R++     +++   
Sbjct: 468 IDRQQMNEMKQITAQRRIAAT-------------EDAIARLSQVLERLDQQFRQQLE--- 511

Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491
           + V      +         + K  LK     ++ T+     +           + ++F  
Sbjct: 512 SRVQNIFAKISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565

Query: 492 GQAN 495
           G   
Sbjct: 566 GIIE 569


>gi|145509184|ref|XP_001440536.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407753|emb|CAK73139.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1093

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 63/213 (29%), Gaps = 8/213 (3%)

Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300
           I +           L D     +        ++    ++  +      +A  N+I+I+  
Sbjct: 710 IVVKEKTSQFDTQNLRDQLQQYKQANTQLNQDIQTLREQVQKYRSEIGQANQNHIVIQRE 769

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                     ++ L    + L     +      +L+ +L     R               
Sbjct: 770 TQLNKQNQGEIEKLMARIRELDFESQQKTSQINQLQMDLRNQEIRVRNELEQQF------ 823

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                +   RQ++  K Q       Q+L+Y     +++++      +Q + +       I
Sbjct: 824 --TSRLTIERQNLESKMQTQSSGETQNLQYQLKSLQQELSQYKQRYQQLEQQFNQSKIEI 881

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
            +  ++   +   ++K     ++      Q+  
Sbjct: 882 TQFRSQQSNVNLDQVKQLQQRIAKLESENQTLN 914


>gi|119589445|gb|EAW69039.1| hCG22253, isoform CRA_a [Homo sapiens]
 gi|119589446|gb|EAW69040.1| hCG22253, isoform CRA_a [Homo sapiens]
 gi|208965454|dbj|BAG72741.1| rho/rac guanine nucleotide exchange factor (GEF) 18 [synthetic
           construct]
          Length = 1015

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             + +L + L N    ++         R     RE +  L+              N  K 
Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +  +QQ  E+  +   + +      ++        Q + R+      
Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 762

Query: 420 IKKLITRIEFILSHKIKSCHT 440
           +     R      H ++    
Sbjct: 763 L----ERQRQAYQHDLERLRE 779


>gi|41327769|ref|NP_056133.2| rho guanine nucleotide exchange factor 18 isoform a [Homo sapiens]
          Length = 1015

 Score = 37.8 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%)

Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
             + +L + L N    ++         R     RE +  L+              N  K 
Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                 ++K +  +  +QQ  E+  +   + +      ++        Q + R+      
Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 762

Query: 420 IKKLITRIEFILSHKIKSCHT 440
           +     R      H ++    
Sbjct: 763 L----ERQRQAYQHDLERLRE 779


>gi|224499768|ref|ZP_03668117.1| hypothetical protein LmonF1_08799 [Listeria monocytogenes Finland
            1988]
          Length = 1108

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|47096787|ref|ZP_00234369.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 1/2a
            F6854]
 gi|254898259|ref|ZP_05258183.1| hypothetical protein LmonJ_00550 [Listeria monocytogenes J0161]
 gi|254912248|ref|ZP_05262260.1| DNA polymerase III [Listeria monocytogenes J2818]
 gi|254936575|ref|ZP_05268272.1| DNA polymerase III [Listeria monocytogenes F6900]
 gi|47014820|gb|EAL05771.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 1/2a
            F6854]
 gi|258609171|gb|EEW21779.1| DNA polymerase III [Listeria monocytogenes F6900]
 gi|293590225|gb|EFF98559.1| DNA polymerase III [Listeria monocytogenes J2818]
          Length = 1108

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|317049112|ref|YP_004116760.1| phosphate ABC transporter inner membrane subunit PstA [Pantoea sp.
           At-9b]
 gi|316950729|gb|ADU70204.1| phosphate ABC transporter, inner membrane subunit PstA [Pantoea sp.
           At-9b]
          Length = 532

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 8/105 (7%)

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH--IKKLITR 426
            R      QQ +E  V   LR     ++  +A L+   E  + +            L   
Sbjct: 134 ARDRDALLQQRLE-AVHDQLRQASRIRRIDMARLNAQLENLQQQAEEQQRKGEFSALRQS 192

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
                S  ++    +++     LQ+ + ++ L      ++D    
Sbjct: 193 EFDANSAALQRRFNALANQLSQLQTASQRDVL-----VLRDVQGQ 232


>gi|294814013|ref|ZP_06772656.1| putative serine protease [Streptomyces clavuligerus ATCC 27064]
 gi|326442417|ref|ZP_08217151.1| putative serine protease [Streptomyces clavuligerus ATCC 27064]
 gi|294326612|gb|EFG08255.1| putative serine protease [Streptomyces clavuligerus ATCC 27064]
          Length = 332

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            I  ++   IT    ++    + +   DG+   A V+   P K+
Sbjct: 131 VIITSDGEIITNNHVISGADTVSVRLSDGRVLTADVVGTDPGKD 174


>gi|254388577|ref|ZP_05003811.1| serine protease [Streptomyces clavuligerus ATCC 27064]
 gi|197702298|gb|EDY48110.1| serine protease [Streptomyces clavuligerus ATCC 27064]
          Length = 396

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506
            I  ++   IT    ++    + +   DG+   A V+   P K+
Sbjct: 195 VIITSDGEIITNNHVISGADTVSVRLSDGRVLTADVVGTDPGKD 238


>gi|268557102|ref|XP_002636540.1| C. briggsae CBR-LIN-5 protein [Caenorhabditis briggsae]
          Length = 803

 Score = 37.8 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 55/182 (30%), Gaps = 6/182 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
              ++  ++L +   RL   I  L +  +  +N     +    + L   R   + L   L
Sbjct: 412 QDADNAMTTLGDERERLKQTISTLQREHVERMNMSKSTIERIQRELEEERKDKNELSSLL 471

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
               E  +       +     + +   +   +K  Q +  + +  E       R I   K
Sbjct: 472 NELNEKALGTDKETHDQAEGFLSARACLEGAKKRIQQLELELKGKEGFNAVLERQIEKSK 531

Query: 396 KEKIAILHMLRE------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +     L +  +        K  +     +  + I  ++  + + I      +      L
Sbjct: 532 EILQTELMIREQSAIQFHNVKAELEEQSVNKDREIVLLKENMQNLIARHQNQMEEQQSAL 591

Query: 450 QS 451
           ++
Sbjct: 592 KA 593


>gi|322490482|emb|CBZ25742.1| putative kinesin [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 1034

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 59/197 (29%), Gaps = 6/197 (3%)

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           T+ +   D  A        + +   E        L  R +++      ++        + 
Sbjct: 664 TVMELVKDKEALLLRACNGVLIANNESAAMLGKMLSEREDDLRNTKRLHEEELATQAERF 723

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                + L     +  +L       +  +  R  R                   K ++ +
Sbjct: 724 CERLKEALDEGAVQQQQLLDRHREAVAQLEGRLQRSHEINEME------RKRNDKEKEEL 777

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            ++ Q  ++ ++   +      + ++      R ++ + +  L    ++ + R+   ++ 
Sbjct: 778 RQRVQLAQERMRNEYQQEIERLRARVEGDIGDRYKSGDAVRQLQAMHEREMERLRDEINL 837

Query: 434 KIKSCHTSVSITTRILQ 450
             +S  +  +     L+
Sbjct: 838 LKRSKDSDCARLHNQLE 854


>gi|307546311|ref|YP_003898790.1| chromosome segregation protein [Halomonas elongata DSM 2581]
 gi|307218335|emb|CBV43605.1| K03529 chromosome segregation protein [Halomonas elongata DSM 2581]
          Length = 1164

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 44/178 (24%), Gaps = 1/178 (0%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
              +             I   +  +++ L     A                 L       
Sbjct: 180 TENRMRRTQENLERLEDIREELDKQLDKLKRQADAARRYQTLKQEEYRLKGELALLRGRA 239

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           L+     +      +   ++ + L     + R      +        +  +  F E    
Sbjct: 240 LKASQDEEEARVGELETAVEREVLGLRQCETRLEEARAEHDRLASELEGYQARFHETTTA 299

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
           IA L    E T+ R   L   ++     ++  L    +     ++     L++   + 
Sbjct: 300 IARLEQDLEHTRARDQQLARDLESARRELDD-LKRVGEDDGERLTRLDERLETLGPEQ 356


>gi|300705406|ref|YP_003747009.1| methylmalonyl-CoA mutase [Ralstonia solanacearum CFBP2957]
 gi|299073070|emb|CBJ44427.1| METHYLMALONYL-COA MUTASE [Ralstonia solanacearum CFBP2957]
          Length = 1099

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 49/403 (12%), Positives = 103/403 (25%), Gaps = 28/403 (6%)

Query: 78  FLPEEGIEFLVIGKITTFPGSSKYQIIIES---LIPSGSGTLLTALEKRKKKLLEEGL-- 132
           + PE+G    + G I          +  ++   L P  +G    AL +    L    +  
Sbjct: 134 YSPEDGQRMGLAGMIADMARRCDIDLSTDAPATLEPVAAGD-RRALAQLITALESGRIDP 192

Query: 133 -FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL--RVIIFPVKVQGDECPKE 189
                 +      P  +  IT   GA    +   +  RF L     +    +  D   ++
Sbjct: 193 VLRQAVRERALATPTPVLGITGTGGAGKSSLTDELIRRFRLDQHDRLRIAVISIDPSRRK 252

Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII--SAI 247
              A+L           P   +  +A    + E      D +         + I+  S I
Sbjct: 253 SGGALLGDRIRMNAINHPHLFVRSMATREAASEIADALPDAIAACRAGGFDLIIVETSGI 312

Query: 248 GHET--DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305
           G        L D +  +  P    A+++           +   +                
Sbjct: 313 GQGDAAIVPLVDLSLYVMTPEFGAASQLEKIDMLDFADLVAINKFDRKGAQDAWRDVCKQ 372

Query: 306 TLNSLLKALPNSDQTL---SCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSD 360
              +  +     +      + + +  D     L H L   +           +       
Sbjct: 373 VQRNREQWDARPEAMPVFGTQASHFNDDGVTALYHALADRLAECGLALGERTLPRPPGPC 432

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
              H+       +    +  + +   H R    E + ++A      + ++  +       
Sbjct: 433 STSHDAIVPPARVRYLAEVADTVRGYHRR---AEAQSRLARERQQLQASRRMLEQAGAAG 489

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463
             L                  +    R L +      L+R Y 
Sbjct: 490 DALAALDTQAAER-----DARLGAAERKLLAMWPD--LRRAYA 525


>gi|242001050|ref|XP_002435168.1| septin, putative [Ixodes scapularis]
 gi|215498498|gb|EEC07992.1| septin, putative [Ixodes scapularis]
          Length = 426

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 62/204 (30%), Gaps = 9/204 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D  +     +    +P+     +  + +  ++                +    +   +  
Sbjct: 224 DETSAEINQSMNAHIPLAVVGSTDFVRVGNKMVRARQYPWGTVQVENENHCDFVKLREML 283

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH- 379
           +  +   L        + L   +  +   F+ +    K        ++ RQ  L + Q  
Sbjct: 284 VRTNMEDLREQTHSRHYELYRRMRLEQMGFSDLGTDNKPVSFQETYEQKRQEHLAELQRK 343

Query: 380 ---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
              + Q+    ++    E KE    LH   +  K +       +++   R+E  +    +
Sbjct: 344 EDEMRQMFVVRVKDKEAELKEAEKELHAKFDALKKQHAEEKRKLEEDRKRLEDDMRRLAE 403

Query: 437 SCHTSVSITTRILQSFAYKNTLKR 460
                     + +Q+ ++  TL +
Sbjct: 404 KK-----AMVQQMQTHSHTLTLGK 422


>gi|326676547|ref|XP_003200605.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
 gi|94732192|emb|CAK10889.1| novel protein [Danio rerio]
          Length = 561

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/201 (9%), Positives = 47/201 (23%), Gaps = 8/201 (3%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
            D     +               ++      NL     +    LI         + +   
Sbjct: 97  CDSCTGRKHKAIKSCLVCLNSYCQNHLEQHENLFKGKRH---NLIDATGRLQEMICRKHD 153

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
              +    +  R   +   ++ + +               ++         Q+  Q    
Sbjct: 154 KLLEIYCRTDQRCICMLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRER 211

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
           K Q + + VK H R      K+   +   L    + +   +   I+             +
Sbjct: 212 KLQELNEAVKIHERSAQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLL 271

Query: 436 KSCHTSVSITT---RILQSFA 453
           K     +         L+  +
Sbjct: 272 KQLQQEIDDLRGKNAKLEQLS 292


>gi|34328010|dbj|BAA23698.3| KIAA0402 [Homo sapiens]
          Length = 3284

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                +     +   +     L+      +  ++        S  + + N  +       
Sbjct: 765 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 824

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +L         +LE  +  +      +   + SD  +H  Q  R+     Q      +  
Sbjct: 825 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 883

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
                      +   L   +E T+         +++   +    L    +     +   T
Sbjct: 884 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 943

Query: 447 RILQS 451
             L++
Sbjct: 944 AELEA 948


>gi|332208869|ref|XP_003253534.1| PREDICTED: centrosomal protein of 164 kDa [Nomascus leucogenys]
          Length = 1422

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 745 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 800

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 801 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 860

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 861 LETVRQEQHKRLEDLRRRHREQERKLQDL 889


>gi|309354987|emb|CAP39769.2| CBR-LIN-5 protein [Caenorhabditis briggsae AF16]
          Length = 808

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 55/182 (30%), Gaps = 6/182 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
              ++  ++L +   RL   I  L +  +  +N     +    + L   R   + L   L
Sbjct: 417 QDADNAMTTLGDERERLKQTISTLQREHVERMNMSKSTIERIQRELEEERKDKNELSSLL 476

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
               E  +       +     + +   +   +K  Q +  + +  E       R I   K
Sbjct: 477 NELNEKALGTDKETHDQAEGFLSARACLEGAKKRIQQLELELKGKEGFNAVLERQIEKSK 536

Query: 396 KEKIAILHMLRE------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +     L +  +        K  +     +  + I  ++  + + I      +      L
Sbjct: 537 EILQTELMIREQSAIQFHNVKAELEEQSVNKDREIVLLKENMQNLIARHQNQMEEQQSAL 596

Query: 450 QS 451
           ++
Sbjct: 597 KA 598


>gi|149041631|gb|EDL95472.1| rCG58154, isoform CRA_b [Rattus norvegicus]
          Length = 664

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 11/177 (6%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
            LEA     ++   ++    +    K +      L       D   R +      +   +
Sbjct: 275 YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 334

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                     I    L  ++++N+      QQ + Q     L+      +  +    +  
Sbjct: 335 -------QLIIIRSRLDQSMEENQDLKDALQQRLTQQDTSVLQLKQELLRANMDKDELHN 387

Query: 407 EQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
           +    + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 388 QNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDASYQQVDLER 443


>gi|83320096|ref|NP_001032743.1| dixin [Rattus norvegicus]
 gi|123779818|sp|Q2VUH7|DIXC1_RAT RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1;
           Short=Coiled-coil-DIX1; AltName: Full=DIX
           domain-containing protein 1
 gi|62199652|gb|AAX76925.1| dixin [Rattus norvegicus]
          Length = 674

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LEA     ++   ++    +    K +      L       D   R +           
Sbjct: 280 YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 339

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               +   + +       +   +          +  +     QQ + Q     L+     
Sbjct: 340 QLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 397

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 398 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDA 456

Query: 453 AYKNT-LKR 460
           +Y+   L+R
Sbjct: 457 SYQQVDLER 465


>gi|268590142|ref|ZP_06124363.1| cell division protein MukB [Providencia rettgeri DSM 1131]
 gi|291314416|gb|EFE54869.1| cell division protein MukB [Providencia rettgeri DSM 1131]
          Length = 1480

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/178 (7%), Positives = 47/178 (26%), Gaps = 9/178 (5%)

Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337
           +      L  L     +  +   + +       L AL         +  + ++  + + +
Sbjct: 425 RARELCQLPELSIDNADEWLDTFEAREQQATQALLALEQKMSVADAAHSQFEQAYQLVRN 484

Query: 338 NLE--IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
            +          +    + +      L   +Q  R  + E QQ +              K
Sbjct: 485 MVGEVSRSDAYQQARALLRDWSSQQHLADRVQPLRMQLSELQQRLNSQQNAERLLAEFCK 544

Query: 396 KEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448
           +   +      +     +      +     +    R++  +  +++     +S  +  
Sbjct: 545 RYGQSYEPDELDALMAELEAQQEELSIGVNESGERRMQ--MRQELEQIRQRISQLSSK 600


>gi|195163982|ref|XP_002022828.1| GL14776 [Drosophila persimilis]
 gi|194104851|gb|EDW26894.1| GL14776 [Drosophila persimilis]
          Length = 1036

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 11/181 (6%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +  V      +    N E     + +     K     +L     N  Q  +    R+ +
Sbjct: 654 GDRKVFDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 713

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++          RK    +H           H+ Q+ R  + +K+Q +EQ     L++
Sbjct: 714 AQKQYIELEMRKFKRKRMVVHH----------EHDDQQLRDELSKKEQQLEQAHAMLLKH 763

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               ++ +      + +  + +I   H   +      ++ I    ++     +    + L
Sbjct: 764 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQPKSL 823

Query: 450 Q 450
           +
Sbjct: 824 K 824


>gi|88810520|ref|ZP_01125777.1| pyochelin synthetase F [Nitrococcus mobilis Nb-231]
 gi|88792150|gb|EAR23260.1| pyochelin synthetase F [Nitrococcus mobilis Nb-231]
          Length = 1833

 Score = 37.8 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 10/213 (4%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H+    +   +AD             + V++    +   LE  L      +     +T  
Sbjct: 122 HDMLRAVI--SADGYQRVLPEVPCYRIAVQDGRDWAPSELEQHLRASRAEMDHRLYDTGK 179

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLIHNIQ 367
                       L  +R R   +       L          F+ +   ++     +  + 
Sbjct: 180 W-------PLFELRLTRTRGGDILHFSLDALIADWASAGILFSELNQILRGHGDTLPALD 232

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              +  L  ++ +   V       +   + +                      ++   R+
Sbjct: 233 IRFRDYLLAERRLRDGVAYRRARDYWMDRVEALPSAPELPLLSRTAVENRARFRRHHWRL 292

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
                  ++   +  S+T   +   AY   L+R
Sbjct: 293 PRGHWEALRRQASMFSLTASNVVLAAYVAVLQR 325


>gi|321157879|emb|CBZ05906.1| putative transcriptional regulator of the TetR family [Pseudomonas
           extremaustralis]
          Length = 202

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 7/116 (6%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
           F    + +          +   H      H+      H R++F +       L  L +  
Sbjct: 54  FERFQSELAPLLDPPAEAQLEAHDYWLFLHLIVERMAHYRFLFQDLSNLAGRLPKLAKGM 113

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460
           ++ +  L   +  L+ R++     ++ S   ++           L S  Y+  L R
Sbjct: 114 RHLLTALKRTLASLLARLQAA--GQLVSDTQALGQLVEQITLTLLFSLDYQRILDR 167


>gi|269303263|gb|ACZ33363.1| single-strand binding protein [Chlamydophila pneumoniae LPCoLN]
          Length = 159

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110
           KD        IW    +K+    ++G   +V G I+   +        S   I ++SL  
Sbjct: 38  KDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKF 97

Query: 111 SGSG 114
           S  G
Sbjct: 98  SPFG 101


>gi|15618301|ref|NP_224586.1| single-stranded DNA-binding protein [Chlamydophila pneumoniae
           CWL029]
 gi|15835919|ref|NP_300443.1| single-strand DNA-binding protein [Chlamydophila pneumoniae J138]
 gi|16752652|ref|NP_444917.1| single-strand DNA-binding protein [Chlamydophila pneumoniae AR39]
 gi|33241731|ref|NP_876672.1| single-strand DNA-binding protein [Chlamydophila pneumoniae TW-183]
 gi|6647829|sp|Q9Z8F7|SSB_CHLPN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
           AltName: Full=Helix-destabilizing protein
 gi|4376665|gb|AAD18530.1| SS DNA Binding Protein [Chlamydophila pneumoniae CWL029]
 gi|7189295|gb|AAF38218.1| single-strand binding protein [Chlamydophila pneumoniae AR39]
 gi|8978758|dbj|BAA98594.1| SS DNA binding protein [Chlamydophila pneumoniae J138]
 gi|33236240|gb|AAP98329.1| putative ssDNA binding protein [Chlamydophila pneumoniae TW-183]
          Length = 160

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110
           KD        IW    +K+    ++G   +V G I+   +        S   I ++SL  
Sbjct: 39  KDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKF 98

Query: 111 SGSG 114
           S  G
Sbjct: 99  SPFG 102


>gi|288574754|ref|ZP_06393111.1| protease Do [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570495|gb|EFC92052.1| protease Do [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 465

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPP 504
           G+  +   +   +T    +A    I +   DG+  +A ++ K P 
Sbjct: 95  GF-IV-SEDGKILTNNHVVADADTITVTLSDGRTFDAKIVGKDPT 137


>gi|187955498|gb|AAI46853.1| Benzodiazapine receptor (peripheral) associated protein 1 [Homo
           sapiens]
          Length = 1857

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|33112218|sp|O73683|A4_TETFL RecName: Full=Amyloid beta A4 protein; AltName: Full=ABPP;
           Short=APP; AltName: Full=Alzheimer disease amyloid A4
           protein homolog; Contains: RecName: Full=Beta-amyloid
           protein; AltName: Full=A-beta; AltName: Full=Beta-APP;
           Flags: Precursor
 gi|3093586|gb|AAC41275.1| amyloid precursor protein [Tetraodon fluviatilis]
          Length = 780

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/242 (10%), Positives = 68/242 (28%), Gaps = 10/242 (4%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPI-----ISAIGHETDWTLADYAADLRAPTPTGAAE 272
           GG   ++ +F  E    ++ +S +P        A+ H  +   AD            + E
Sbjct: 359 GGCGGNMNNFESEEYCLSVCSSVVPTDMPSSPDAVDHYLETP-ADENEHAHFQKAKESLE 417

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
                +            R    + R    K   +    + +   +Q  +  R +L    
Sbjct: 418 AKHRERMSQVMREWEEAERQAKNLPR--ADKKIVIQRFQEKVEALEQEAASERQQLVETH 475

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
                 L     R          +       H     ++++  +Q+  +  +K       
Sbjct: 476 MARVEALLNDRRRLALENYLTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRM 535

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQ 450
           ++ K+   I   +    +     ++  +  L         +  +++      +   + L 
Sbjct: 536 VDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQLA 595

Query: 451 SF 452
           + 
Sbjct: 596 NL 597


>gi|119776443|ref|YP_929183.1| hypothetical protein Sama_3311 [Shewanella amazonensis SB2B]
 gi|119768943|gb|ABM01514.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 483

 Score = 37.8 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/173 (9%), Positives = 46/173 (26%), Gaps = 3/173 (1%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
            +   P   +      +E    + +N   R         + +    +S  + + +     
Sbjct: 312 SQQHNPQVRSRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSRERDMGHQSHDR 371

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
              +    R   +    ++    R+           +  F     Q+ RQ   E+Q+  +
Sbjct: 372 ELRQQLNSRERADSRERMDN---RERMESRERSQPQQRGFEQREPQRERQQFQERQRDAQ 428

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
               +  +     ++E        R+Q +          +    R       +
Sbjct: 429 PAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRER 481


>gi|332252671|ref|XP_003275477.1| PREDICTED: LOW QUALITY PROTEIN: putative golgin subfamily A member
           6D-like [Nomascus leucogenys]
          Length = 722

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/180 (5%), Positives = 46/180 (25%), Gaps = 6/180 (3%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
              +   +           +              +  +   +++LS  + ++        
Sbjct: 233 EYSYHIKAERARWQERMRKMSVETLTLKEEKKRDIHRIEELERSLSQLQNQMAEPQSLAP 292

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
                 + +       +   ++        Q      L  Q   ++   +      L ++
Sbjct: 293 PAGTSELEQLQDEAKQLRKEVEVLEGKLQSQVENNQALSLQSKEQKQRLREQEERMLWER 352

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIE------FILSHKIKSCHTSVSITTRILQ 450
           E++   +   ++ +  +      ++K   R+            +++     +      L+
Sbjct: 353 ERLCETNKKLQEQQEMLQEKGDRLQKQEQRLRKQEGWLQKEEGRLRKEEERLRKQEGRLR 412


>gi|261821331|ref|YP_003259437.1| cell division protein MukB [Pectobacterium wasabiae WPP163]
 gi|261605344|gb|ACX87830.1| chromosome segregation and condensation protein MukB domain protein
           [Pectobacterium wasabiae WPP163]
          Length = 1479

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/177 (9%), Positives = 44/177 (24%), Gaps = 5/177 (2%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +      L +L A   +  +     K      +L  L         +  + +   + + 
Sbjct: 424 ERARTLCQLTDLTADNADEWLDSYHAKEQEATDILLMLEQKLSVADAAHGQFEEAYQLVS 483

Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
                I   +        + +     +    +Q  R  + E +Q + +            
Sbjct: 484 KIAGAINRNEAWQVARDLLRDSASQRYQAERVQPLRMRLSELEQRLREQQDAERLLQDFS 543

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRI 448
           K+          E  +  +      +  L+         L  +++     +   T  
Sbjct: 544 KRNGQDYQPEELESLQQELDARIDTLSSLVAEAGERRMALRQELEQTQQRIQKLTTR 600


>gi|296122713|ref|YP_003630491.1| metal-dependent phosphohydrolase HD sub domain protein
           [Planctomyces limnophilus DSM 3776]
 gi|296015053|gb|ADG68292.1| metal-dependent phosphohydrolase HD sub domain protein
           [Planctomyces limnophilus DSM 3776]
          Length = 328

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 53  AYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110
            Y    L+D    I+  +W  +   +    + G    V GK+  F      Q+I+    P
Sbjct: 34  LYLNVDLRDKSGVINGRMWNVSEESVA-HIQAGQYVRVRGKVQLF--QGVLQLILTGAHP 90


>gi|170692134|ref|ZP_02883297.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M]
 gi|170142564|gb|EDT10729.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M]
          Length = 1172

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 49/383 (12%), Positives = 109/383 (28%), Gaps = 20/383 (5%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 629  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196
                              V +   +       L++ +        +  +   +I   + +
Sbjct: 686  AAIRAEAAHTQAAQVLTDVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745

Query: 197  LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254
            +N   + +   R +      R  G + +L   F D  +     +  +        + D  
Sbjct: 746  INAQIDEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEELTTARGQARDLDRA 805

Query: 255  LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
              D  +AA   A              E  +    +LE     +     +     L   L 
Sbjct: 806  ATDARFAARNMAARIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865

Query: 313  ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
                 ++ L  +R  LD L  +L    E  +          +  ++       +++    
Sbjct: 866  IRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAAR 920

Query: 373  ILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            +  +Q   Q     V +      L    K + L     +  N I  L       +  ++ 
Sbjct: 921  LNGEQFVEQLAAAGVDEAELQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDELKA 980

Query: 430  ILSHK--IKSCHTSVSITTRILQ 450
                K  + +    ++     L+
Sbjct: 981  ATERKTFLDAQSADLTSAIETLE 1003


>gi|171906559|ref|NP_004749.2| peripheral-type benzodiazepine receptor-associated protein 1
           isoform a [Homo sapiens]
 gi|145559522|sp|O95153|RIMB1_HUMAN RecName: Full=Peripheral-type benzodiazepine receptor-associated
           protein 1; Short=PRAX-1; AltName: Full=Peripheral
           benzodiazepine receptor-interacting protein;
           Short=PBR-IP; AltName: Full=RIMS-binding protein 1;
           Short=RIM-BP1
          Length = 1857

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|47215978|emb|CAF96380.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1386

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/194 (9%), Positives = 64/194 (32%), Gaps = 17/194 (8%)

Query: 274  AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
             +  +  + + L          ++R ++    +L +  + L    Q L+  + +      
Sbjct: 1008 MLEEQLQVLAQLEVAIREHKQEMVRKVESLQQSLEAKERELRQVQQELADKKLKESHRVC 1067

Query: 334  ELEHNLEII---IFRKYRHFNHIINRIKSDFLIHNIQK-----------NRQHILEKQQH 379
              +  LE +   +         +  ++ S  L    ++           +++    + + 
Sbjct: 1068 ACQQKLERLAEELVEAQNRCEALTRQLDSHKLHSKEKEVQLCAVEKDLASKEACWLELEA 1127

Query: 380  IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL---SHKIK 436
              Q     L      ++E+        +QT+ ++  + + +     ++   L    ++++
Sbjct: 1128 ELQGTITSLEKELELEREEHNRELESLQQTRGQLLKVSSTMSSTQDKLSAKLDQSQNQLE 1187

Query: 437  SCHTSVSITTRILQ 450
               +    T+  L+
Sbjct: 1188 QARSQFQQTSSQLE 1201


>gi|125982899|ref|XP_001355215.1| GA12831 [Drosophila pseudoobscura pseudoobscura]
 gi|54643528|gb|EAL32272.1| GA12831 [Drosophila pseudoobscura pseudoobscura]
          Length = 1034

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 11/181 (6%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +  V      +    N E     + +     K     +L     N  Q  +    R+ +
Sbjct: 652 GDRKVFDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 711

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
             ++          RK    +H           H+ Q+ R  + +K+Q +EQ     L++
Sbjct: 712 AQKQYIELEMRKFKRKRMVVHH----------EHDDQQLRDELSKKEQQLEQAHAMLLKH 761

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               ++ +      + +  + +I   H   +      ++ I    ++     +    + L
Sbjct: 762 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQPKSL 821

Query: 450 Q 450
           +
Sbjct: 822 K 822


>gi|240949653|ref|ZP_04753988.1| cell division protein MukB [Actinobacillus minor NM305]
 gi|240295911|gb|EER46587.1| cell division protein MukB [Actinobacillus minor NM305]
          Length = 1492

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/161 (9%), Positives = 49/161 (30%), Gaps = 3/161 (1%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           E ++       ++ K++ +   L    N+++ L+    +          +LE     +  
Sbjct: 530 EQKMQAAQAVGLRQKLHEIEQRLHQQQNAERLLAEFNQKAQT-ELTDAESLESYFEEQQA 588

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +   +     + + Q+ ++  L +Q +                           E 
Sbjct: 589 RLEDLEAELAEFVEVRSTQRQQREQLNQQYNQLAKNAPAWHTAQSALARLEEQCGEKFEA 648

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +++ + ++ T +     R   +L  ++      +      L
Sbjct: 649 SQSVMQFMQTMLS--KEREATLLRDELARKEQQLDEQISRL 687


>gi|229527911|ref|ZP_04417302.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae
           12129(1)]
 gi|229334273|gb|EEN99758.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae
           12129(1)]
          Length = 570

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|224162362|ref|XP_002199997.1| PREDICTED: similar to hCG2043248, partial [Taeniopygia guttata]
          Length = 936

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 98/348 (28%), Gaps = 35/348 (10%)

Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDI--LQRISCRFPL 172
            L    +  ++++    L + +  + +  +P  +           R    L  I  R  +
Sbjct: 299 ALSCQRDILQEQVKHHKLLNQKIISLLYALPTNVGNSQGKGRLGQRRAKRLVYIFRRAVI 358

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
            V+            +  A A                  I +  G      +  F +E +
Sbjct: 359 AVL---------AAHRLRALARHSCTFFVWTDGSRGCTGIQVCVGESRGRHVSRFEEEGV 409

Query: 233 -----VRAIANSSIPI-ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286
                +  + +S++   I +   E +  L            +  +       + + +  I
Sbjct: 410 DCIEALDWLTSSNLYTAIVSSISELEDVLCKQDVHSWLSGHSLISAARNCFAKLMDNLSI 469

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-LEIIIFR 345
            +E             + ++L   L    +     +      DRLP       L+  IF 
Sbjct: 470 LMETVQGKPCGGRAYLERDSLIQRLARGLHRVNAQALEAGLYDRLPSTRNIAILQQEIFE 529

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
             +        ++S  L   + + R    E ++  E+  +   +   L+ K     +H  
Sbjct: 530 FSQRL--HAAEVESRSLQLQLAECRWAFNEMRKDAEKAHRLQEQLNELQHKISQDNIHEE 587

Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
            E    R               E  +   ++     +   +  L+S +
Sbjct: 588 LENALQR---------------EQEVRLLLQEYQRRLQELSNKLESCS 620


>gi|145508383|ref|XP_001440141.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407347|emb|CAK72744.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2778

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 55/194 (28%), Gaps = 7/194 (3%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT-LSCSRYRLD 329
            E     +             +  I   +                      +  +  + +
Sbjct: 656 KEFVASSQFQDYDQAKIYLQTIQQICKFMESLLHQNKKLFQHLHNFKQSLQIESAHGKFN 715

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK----NRQHILEKQQHIEQIVK 385
            L       L+       + F+  +  +K D L    ++    N+Q      Q++ Q  K
Sbjct: 716 DLLNLWTMILQTTTELDSQQFDQAVFLVKFDQLQQKQEQIIKLNQQIRWPFNQYLSQYFK 775

Query: 386 QHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
              +   + ++ K    +        +NR   L  ++K++       +   ++  +  V 
Sbjct: 776 MLTQLDTIFQELKTFKTYDSTADPNTQNRYDSLRLNLKQICQSQIQRIKSTLEQYNQGVD 835

Query: 444 ITTRILQSFAYKNT 457
                L + ++ + 
Sbjct: 836 QLQNKLDNQSHLSI 849


>gi|114632697|ref|XP_001136998.1| PREDICTED: similar to protein kinase isoform 2 [Pan troglodytes]
          Length = 968

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                  +   +  E       +R    K               + +   +  LD   ++
Sbjct: 651 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 710

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           +    +  +    R   +   ++         +   +H+ EK Q ++Q +K         
Sbjct: 711 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 764

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                    M R Q   R       +++   R+   L ++       +
Sbjct: 765 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 804


>gi|81295809|ref|NP_006022.3| pericentrin [Homo sapiens]
 gi|313104312|sp|O95613|PCNT_HUMAN RecName: Full=Pericentrin; AltName: Full=Kendrin; AltName:
           Full=Pericentrin-B
          Length = 3336

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                +     +   +     L+      +  ++        S  + + N  +       
Sbjct: 738 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 797

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +L         +LE  +  +      +   + SD  +H  Q  R+     Q      +  
Sbjct: 798 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 856

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
                      +   L   +E T+         +++   +    L    +     +   T
Sbjct: 857 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 916

Query: 447 RILQS 451
             L++
Sbjct: 917 AELEA 921


>gi|71414609|ref|XP_809401.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70873776|gb|EAN87550.1| hypothetical protein Tc00.1047053511523.30 [Trypanosoma cruzi]
          Length = 1116

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/201 (8%), Positives = 46/201 (22%), Gaps = 3/201 (1%)

Query: 250  ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTL 307
              D  + +          T     A       +        ++ + + R           
Sbjct: 831  HLDSVIEEQLGGKCHQKYTEKLNRAHECLLREREKSELRRKQMESALERKRSKSEASRMA 890

Query: 308  NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                    N    L   + R  R   +   +      +       + ++I        + 
Sbjct: 891  REQEVQEKNKKLLLRQHQSRAVRDKIQQARDDFNETIQAQMLLQEMESKITRQVREEVMS 950

Query: 368  KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              RQ      Q + +  K+         K+        RE    R   L    ++ + + 
Sbjct: 951  FRRQETDRLTQRLCEERKRREAAAIQAAKKNERRSVQ-RELCVQRTKELQESRRRHVMQK 1009

Query: 428  EFILSHKIKSCHTSVSITTRI 448
            +  +  + +     +      
Sbjct: 1010 QLDMQQRQQRAAERLERAREQ 1030


>gi|321452419|gb|EFX63808.1| hypothetical protein DAPPUDRAFT_118832 [Daphnia pulex]
          Length = 841

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 3/165 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
                            +        +AL    + L       +R  R  +  L     R
Sbjct: 217 RQQHQARKRAADDTETAEEQRARLQAQALR--KKYLRRDESEAERSSRLQDQALRQKSLR 274

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHM 404
                    +R++   L  +  + ++   E+   ++ Q  +Q        + E  + L  
Sbjct: 275 NEESEAEKSSRLREQALRQHSLRKKESEAERSARLQDQAQRQKSLRNEESEAENSSRLRE 334

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              +  +         K    R + +    +++  T +    R L
Sbjct: 335 QTLRQNSLRKEESEAEKWARQRTQALHQKNLRTKETELGAANRQL 379


>gi|229846773|ref|ZP_04466880.1| cell division protein MukB [Haemophilus influenzae 7P49H1]
 gi|229810262|gb|EEP45981.1| cell division protein MukB [Haemophilus influenzae 7P49H1]
          Length = 1510

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN---LEIIIFRKYRHFNHIINR 356
            K +      L   L   +Q  +  +  +  L    +     L+     +  H       
Sbjct: 548 QKLQAQQTPQLRTKLHELEQRYAQQQSAVKLLNDFNQRANLSLQTAEELEDYHAEQEALI 607

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                 +    +NR  + +K++++  +  +++R        + A L  L +Q+  R+ + 
Sbjct: 608 EDISARLSEQVENRSTLRQKRENLTALYDENVRKAPAWLTAQAA-LERLEQQSGERLEHS 666

Query: 417 HTHIKKLITRI----EFILSH-KIKSCHTSVSITTRIL 449
              +  + +++    E  +   +++     +      L
Sbjct: 667 QDVMNFMQSQLVKERELTMQRDQLEQKRLQLDEQISRL 704


>gi|229514608|ref|ZP_04404069.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TMA 21]
 gi|229348588|gb|EEO13546.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TMA 21]
          Length = 570

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|126327036|ref|XP_001381334.1| PREDICTED: similar to DIX domain containing 1 [Monodelphis
           domestica]
          Length = 668

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D  +  D  A +P    E +   +   Q   
Sbjct: 218 SESIISQSEERADFVIIPSEGQENRTEETDSPFPRDWLAGSPGTYLETSWEDQLLEQQEH 277

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L       ++  + +
Sbjct: 278 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALFEPGANPEEQL-----IIIQSRLDQ 332

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                  +   +          +  +     QQ + Q     L+      +  +    + 
Sbjct: 333 SMEENQDLKKELLKCKQEIRNLQGIK--DALQQRLTQQDTSVLQLKQELLRTNMDKDELH 390

Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
            +    + ++      + +    +       I+     +    R L   +Y+   L+R
Sbjct: 391 NQNVDLQRKLDERSRLLGEYKKELGQK-DRLIQQHQVKLEEALRKLSEASYQQVDLER 447


>gi|119614874|gb|EAW94468.1| benzodiazapine receptor (peripheral) associated protein 1, isoform
           CRA_a [Homo sapiens]
          Length = 1857

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|31296687|gb|AAP46636.1|AF515282_1 pericentrin B [Homo sapiens]
 gi|119629685|gb|EAX09280.1| pericentrin (kendrin), isoform CRA_d [Homo sapiens]
          Length = 3336

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                +     +   +     L+      +  ++        S  + + N  +       
Sbjct: 738 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 797

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +L         +LE  +  +      +   + SD  +H  Q  R+     Q      +  
Sbjct: 798 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 856

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
                      +   L   +E T+         +++   +    L    +     +   T
Sbjct: 857 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 916

Query: 447 RILQS 451
             L++
Sbjct: 917 AELEA 921


>gi|4104812|gb|AAD11957.1| peripheral benzodiazepine receptor interacting protein [Homo
           sapiens]
          Length = 1857

 Score = 37.8 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|219521686|gb|AAI71787.1| BZRAP1 protein [Homo sapiens]
          Length = 1848

 Score = 37.8 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + +    + +  + K      L   L  +    +       RL        ++       
Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    + D  +   Q  +  +   +Q ++ + +   R   LE + + A L +  +Q
Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            + R             R++   +   +    +V +    L S 
Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497


>gi|300021639|ref|YP_003754250.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523460|gb|ADJ21929.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 567

 Score = 37.8 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/164 (10%), Positives = 53/164 (32%), Gaps = 13/164 (7%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
                          +  + +  ++E+       + + LR      +   A    ++ +T
Sbjct: 20  HEAAAQCGHLAAQTLDAAETQNRLIEETNQRTSSLAESLRAANQGLETCSANATNIQTET 79

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR---ILQSFAYKNTLK------- 459
           ++ +  +   +    + +  I+S K +     ++        ++  +    ++       
Sbjct: 80  RDALRSMSDALDGDFSALTEIISRKSEDTKKILATIVEIGHQIKILSINARIEAARAGEA 139

Query: 460 -RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502
            RG+  + +          + A +  +L+NF D    A +   A
Sbjct: 140 GRGFAVVANEVGRLAETTMDHAKEAEVLLNFAD--VEAQIDKSA 181


>gi|229522777|ref|ZP_04412191.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TM
           11079-80]
 gi|229339994|gb|EEO05002.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TM
           11079-80]
          Length = 570

 Score = 37.8 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|157363099|ref|YP_001469866.1| hypothetical protein Tlet_0232 [Thermotoga lettingae TMO]
 gi|157313703|gb|ABV32802.1| hypothetical protein Tlet_0232 [Thermotoga lettingae TMO]
          Length = 384

 Score = 37.8 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/177 (7%), Positives = 46/177 (25%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            K           +     I    K     L     ++ +          ++     +  
Sbjct: 82  DKLGNLEKNQQNLSTKIMGIEAAYKTYEQRLKDFEMSVASLQSQTDKLSQQIYAQLHKEI 141

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             +      +      +++R+++   + +  +      +   ++       L+    E  
Sbjct: 142 EEILNQHQNQISRLEPVLSRVEALEKLASSLQKSIESTDSNLNLLSSKIAELQANQTELS 201

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
              +    L       +      I+KL  +    ++ + K     ++     L + +
Sbjct: 202 RSFSSSENLLNSLLKNVNENSQSIQKLSEQFNVQMNAQGKLYDQKITELAARLDALS 258


>gi|153825763|ref|ZP_01978430.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           MZO-2]
 gi|149740602|gb|EDM54713.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           MZO-2]
          Length = 570

 Score = 37.8 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRISALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|302846877|ref|XP_002954974.1| hypothetical protein VOLCADRAFT_95794 [Volvox carteri f. nagariensis]
 gi|300259737|gb|EFJ43962.1| hypothetical protein VOLCADRAFT_95794 [Volvox carteri f. nagariensis]
          Length = 3311

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/172 (7%), Positives = 48/172 (27%), Gaps = 4/172 (2%)

Query: 282  QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
             ++       L   + +  +   +   +L   +    +       +L  L          
Sbjct: 1920 LTACEARATSLERQLQKRQRQAEDREATLDGEIRALQEHAEDLERQLRGLQVSEREARRN 1979

Query: 342  IIFRKYRHFNHIINRIKSDFLI-HNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEK 398
                  R    +             + + R+ + E++  +  +Q      +     ++ +
Sbjct: 1980 QDADMERQLEQLREERTRLRDEGRQLDERRRQLDEQKWQLDEQQRQLDDRQRQLDNRQRQ 2039

Query: 399  IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            +       +  ++++      +     +++   S K+      V +  R L 
Sbjct: 2040 LEEQQQQVQAAQSKLDERSETLAARQRQLDERAS-KLDERSQQVELQARRLD 2090



 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/162 (6%), Positives = 42/162 (25%), Gaps = 3/162 (1%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
            E +      +             +      Q    +         E     +  +  +  
Sbjct: 2014 EQKWQLDEQQRQLDDRQRQLDNRQRQLEEQQQQVQAAQSKLDERSETLAARQRQLDERAS 2073

Query: 349  HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
              +    +++       +    +   E+ + ++ +++       LE + +     +    
Sbjct: 2074 KLDERSQQVELQA--RRLDDQARLQDERGRQLDDLLRWAEADQRLENRPEGQAKQVDNTP 2131

Query: 409  TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
              +        + K   ++E  L  +++     +    R L 
Sbjct: 2132 QSSEQEERARQLDKREGQLEE-LQRQLRLQRMQLDERARQLD 2172


>gi|295101009|emb|CBK98554.1| exonuclease RecJ [Faecalibacterium prausnitzii L2-6]
          Length = 709

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%)

Query: 52  HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTF-PGSSKYQII--IESL 108
           H    L+  +S I A+ +     ++ +    G        ++ +       Q+   I  L
Sbjct: 534 HCRLRLRQGNSSIYAVWFGMHPEQVPYS--TGDVVDAAISLSVYDSPRGA-QLSGRIIEL 590

Query: 109 IPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151
            P+G G          + L      + + K  I      I  +
Sbjct: 591 HPAGLGNTAAEQAALVQALRRGTPLTPEQKESIAPERSHIITV 633


>gi|119629684|gb|EAX09279.1| pericentrin (kendrin), isoform CRA_c [Homo sapiens]
          Length = 3139

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                +     +   +     L+      +  ++        S  + + N  +       
Sbjct: 620 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 679

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +L         +LE  +  +      +   + SD  +H  Q  R+     Q      +  
Sbjct: 680 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 738

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
                      +   L   +E T+         +++   +    L    +     +   T
Sbjct: 739 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 798

Query: 447 RILQS 451
             L++
Sbjct: 799 AELEA 803


>gi|114365|sp|P16602|ATI_COWPX RecName: Full=A-type inclusion protein; Short=ATI
 gi|221141|dbj|BAA00222.1| A-type inclusion protein [Cowpox virus]
          Length = 1284

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 23/171 (13%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419
           L   +++ R +  E    ++  +    R +   ++         R  ++ ++RI  L   
Sbjct: 680 LERQLRECRGNATEIS-RLQYRITDLERQLNDCRRNNENNADTEREMQRLRDRITDLERQ 738

Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
           +       E    +  +++     +    R L         KR      D N    T   
Sbjct: 739 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------DGNG---TSSE 783

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            +    R+     D + +  + +K   +     K +L   + +    Q  L
Sbjct: 784 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 831


>gi|188992504|ref|YP_001904514.1| hypothetical protein xccb100_3109 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734264|emb|CAP52474.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas
           campestris pv. campestris]
          Length = 246

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
               +++ARGGG   +    +   + RA+  + +P   A+GH  D  L D  AD    TP
Sbjct: 94  GVKGLVIARGGGERLETIG-DSRNVTRALIETGLPFYVALGHANDVLLLDKHADDVFLTP 152

Query: 268 TGAAEMA--VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
           +                       +   + +I+L        + L +   + ++ L  S+
Sbjct: 153 SDFGHRLRDCLDAAQEAEDARAEASDAEDKLIQLSTKLDRRESELDETRRHLNELLQQSK 212

Query: 326 YRLDRLPRELEHN 338
                L  EL   
Sbjct: 213 LNGQGLKAELRQW 225


>gi|20178521|ref|NP_619942.1| Ati or CPXV158 protein [Cowpox virus]
 gi|20153139|gb|AAM13600.1|AF482758_151 Ati or CPXV158 protein [Cowpox virus]
          Length = 1284

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 23/171 (13%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419
           L   +++ R +  E    ++  +    R +   ++         R  ++ ++RI  L   
Sbjct: 680 LERQLRECRGNATEIS-RLQYRITDLERQLNDCRRNNENNADTEREMQRLRDRITDLERQ 738

Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
           +       E    +  +++     +    R L         KR      D N    T   
Sbjct: 739 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------DGNG---TSSE 783

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            +    R+     D + +  + +K   +     K +L   + +    Q  L
Sbjct: 784 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 831


>gi|332023288|gb|EGI63542.1| hypothetical protein G5I_08060 [Acromyrmex echinatior]
          Length = 2241

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/197 (8%), Positives = 59/197 (29%), Gaps = 12/197 (6%)

Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328
               +          S      +   +  +  + +           P+ +        ++
Sbjct: 295 QLVYVPAETLAQRGQSKKGRGRKQYPVRQQHSQRENQASIDQTSLSPDQEAFARQVLQQI 354

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
            +  +E    L+    +++   N     ++    +      R+  L +Q+  ++  K+  
Sbjct: 355 QKEHQETAQFLKEERAKEFTRLNEEQKALERKTRLQQEALQREQELLRQKEADKKRKELE 414

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS---------HKIKSCH 439
           R   + ++ ++  +   RE+ +         + +L  + E              K++   
Sbjct: 415 RLEEMARQRELDRIRDAREKQRQE-ELERRRLSELRIKEEKRREEEARQREEKQKLELEQ 473

Query: 440 TSV--SITTRILQSFAY 454
             +  S     L++ + 
Sbjct: 474 QRILESQQEEQLRATSP 490


>gi|116073799|ref|ZP_01471061.1| chromosome segregation protein SMC [Synechococcus sp. RS9916]
 gi|116069104|gb|EAU74856.1| chromosome segregation protein SMC [Synechococcus sp. RS9916]
          Length = 1202

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 47/142 (33%), Gaps = 3/142 (2%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           +A   ++  +  SR RL  +       +E    R  R    + ++I         +K + 
Sbjct: 378 QACREAEAAVEVSRRRLGDVAGRSGTWMEEQRQRSQRRLE-LQSQITPLQEEQQQRKAKL 436

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EF 429
              +++    Q   +         ++ +  L    +     +      +++L+  +  + 
Sbjct: 437 QQDQERLLELQQELEQDGSEDQRVQDDLTKLEAEWQSLLQALQSGKEELQQLVESVAVQQ 496

Query: 430 ILSHKIKSCHTSVSITTRILQS 451
               +++   T +      L+S
Sbjct: 497 RTRSRLEQEQTRLERDIAKLES 518


>gi|290491232|ref|NP_001166491.1| STE20-like serine/threonine-protein kinase [Cavia porcellus]
 gi|81908391|sp|O55092|SLK_CAVPO RecName: Full=STE20-like serine/threonine-protein kinase;
            Short=STE20-like kinase; AltName: Full=STE20-related
            serine/threonine-protein kinase; Short=STE20-related
            kinase
 gi|2911114|dbj|BAA24930.1| serine/threoine kinase [Cavia porcellus]
          Length = 1231

 Score = 37.8 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 8/129 (6%)

Query: 322  SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
               + R + L +      +  + ++ +  +  + +I            R+ +  KQQ + 
Sbjct: 939  ELMKRRKEELAQSQHVQEQDFVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQLMR 998

Query: 382  QIVKQHLRYIFLEKKEKIAIL--------HMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                          +EK  +L         M R Q   R       +++   R+   L +
Sbjct: 999  AREAAIWELEERHLQEKHQLLKQQLKDQYFMQRHQLLKRHEKETEQMQRYNQRLIEELKN 1058

Query: 434  KIKSCHTSV 442
            +       +
Sbjct: 1059 RQTQERARL 1067


>gi|302836560|ref|XP_002949840.1| hypothetical protein VOLCADRAFT_117392 [Volvox carteri f.
           nagariensis]
 gi|300264749|gb|EFJ48943.1| hypothetical protein VOLCADRAFT_117392 [Volvox carteri f.
           nagariensis]
          Length = 1443

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 11/213 (5%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H+     AD                    +  L ++             +   +      
Sbjct: 235 HQQASDGADCVVAKLTADNLVFLMQLKKAEADLAAANQERAQLRVAAEQQRGPWFDQVRA 294

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
            + + +  S Q       RL+R   E    +E +  +  +    +    +    + +   
Sbjct: 295 GVEEKVRQSLQRAEELEARLERRAAEHAAQMEAMREQHAKLEEQLGAARQHVQELQSGLA 354

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH--------- 419
           +     E  + +    +     +  E     A   +L+E  ++                 
Sbjct: 355 SAVKSKECSERLCAAAESAAAELRRELDNLAAENRVLQESMRSMRQECTERWANEQSALG 414

Query: 420 -IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
            +  L  RI+  L   +      ++   R L +
Sbjct: 415 RVNGLEQRIDE-LQQALSQQMARLAALQRQLDT 446


>gi|156359514|ref|XP_001624813.1| predicted protein [Nematostella vectensis]
 gi|156211614|gb|EDO32713.1| predicted protein [Nematostella vectensis]
          Length = 436

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/176 (8%), Positives = 58/176 (32%), Gaps = 6/176 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                 ++   N + ++  +  +  ++K+    +  + L +  Q+L      +    ++ 
Sbjct: 235 MQYAKDRNQFSNDDQKVKELESKYEQWKMQEDENHRRELMSLRQSLQREIQNMSTQNQQE 294

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
           +  L   +       N   + I +      +    +     ++ I ++V+        + 
Sbjct: 295 KKALTQALADLEYKMNSRPSMIGNIKDEDELDAPPKFQPNNKEEIAEMVRGEFENQLQQV 354

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +         +E+ +  +  ++   K    R++     ++      +S     L++
Sbjct: 355 R------VQSQEEMQRELRRMNQKWKSKEERLQHEHQKEVVKVQDLLSQYGSKLEA 404


>gi|119610510|gb|EAW90104.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_a
           [Homo sapiens]
          Length = 324

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             E +   ++            S  + L      L   R    +   +L+ + + +    
Sbjct: 91  EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 150

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
                    + + +       +++  +++ +    +      R      + +++++    
Sbjct: 151 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 210

Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           E  + ++         +++  R+       ++   +      + LQ  +
Sbjct: 211 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 259


>gi|50414437|gb|AAH77721.1| ARHGEF18 protein [Homo sapiens]
          Length = 1030

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 42/136 (30%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             + +L + L N    ++     ++     ++   +    +  R    +    + +F   
Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             ++     L+ Q   EQ   +  R    ++ E+       RE    ++       +  +
Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELERAGARLQEREGEARQLRERLEQERAEL 763

Query: 425 TRIEFILSHKIKSCHT 440
            R      H ++    
Sbjct: 764 ERQRQAYQHDLERLRE 779


>gi|320449381|ref|YP_004201477.1| repeat motif-containing protein [Thermus scotoductus SA-01]
 gi|320149550|gb|ADW20928.1| repeat motif-containing protein [Thermus scotoductus SA-01]
          Length = 282

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 54/172 (31%), Gaps = 4/172 (2%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
            L   E +L   I ++       +  +   L N    L    +  +        ++E  +
Sbjct: 66  RLAQTENKLEARIQQVESKLEAQIQQVETRLQNQISQLDAKIWETEDKLEAQIQHVENKL 125

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
             + +     +        +    + +Q   + +  I Q+       I   +++  A +H
Sbjct: 126 ETRIQQVESKLEAQIQQVEVRLQNRIQQTEEKLEARIHQVEAHLENQIRETEEKLEAQIH 185

Query: 404 MLREQTKNRIFYLHTHIK----KLITRIEFILSHKIKSCHTSVSITTRILQS 451
            +  +  NRI      ++    ++  R+   +    +     +      L+S
Sbjct: 186 QVEARLGNRIQQTEEKLEAKIHQVEARLGNRIQQTEEKLEAQIQQVRSELES 237


>gi|198471801|ref|XP_001355729.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
 gi|198146086|gb|EAL32788.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
          Length = 1037

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 53/157 (33%), Gaps = 4/157 (2%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
           R  + K       L+   +  +      R R     +E +   +  + ++ +  +     
Sbjct: 179 RTKETKQRDAERALRHQEHLRELARCQQRQRQKARAQEQQRLGKERLRKRQQDEDKAAKE 238

Query: 357 IK--SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           ++     + H I+  R    +  +  E+  ++  R   L K+ +   L     + +  + 
Sbjct: 239 LETLRKDIEHQIKVQRDSEAKWNRIKEERDREIERQTVLRKRGQKEQLEEEERRQRLEVL 298

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                 ++L  R E  L  +++       +  + L +
Sbjct: 299 RQIEEKRELEKRQEEQLKLELEQQRERF-MQHQKLHT 334


>gi|88797157|ref|ZP_01112747.1| hypothetical protein MED297_20027 [Reinekea sp. MED297]
 gi|88780026|gb|EAR11211.1| hypothetical protein MED297_20027 [Reinekea sp. MED297]
          Length = 472

 Score = 37.8 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/149 (9%), Positives = 30/149 (20%), Gaps = 4/149 (2%)

Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363
            +        L    Q L   R    RL  E       +               + + L 
Sbjct: 31  WSRWRRQQLLLEEMQQALHQERSLSARLAAENAGLQVQVRQLTELQAQLTAKDQQLNLLQ 90

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
             ++     + +     E     H   + L    +  +     +   +          + 
Sbjct: 91  REVRTLESRLADINARAESAKAHHAEQLQLLNDSREQLKRDFGQLANDIFEQKQQRFSEQ 150

Query: 424 ITRIEFIL----SHKIKSCHTSVSITTRI 448
                  L      +I+     V      
Sbjct: 151 SKASITALLDPFHRQIEQFRQRVDDIHSR 179


>gi|327277612|ref|XP_003223558.1| PREDICTED: dystrobrevin alpha-like [Anolis carolinensis]
          Length = 768

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 45/154 (29%), Gaps = 11/154 (7%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N  + L       +       +   +                 S  +  N ++ RQ I E
Sbjct: 445 NPSRLLDSPNRLDEEHRLIARYAARLAAETTSSQTQQRGAPDISFSIDAN-KQQRQLIAE 503

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++          +       +  L     +L  R+  +   
Sbjct: 504 LENKNREILQEIQRLRLEHEQASQPTPEKAAQNPTLLAELRLLRQRKDELEQRMSALQES 563

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 564 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 596


>gi|315426595|dbj|BAJ48224.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 419

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 49  SSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
             GH +F + D+   +    ++  G L ++     EG    V+G +          + +E
Sbjct: 282 KGGHVFFRVGDDDGEVVCAAYRPTGGLRRVVQQLIEGDVVKVMGAVK--EKPEGLTLNVE 339

Query: 107 SLI 109
            + 
Sbjct: 340 KIE 342


>gi|315425340|dbj|BAJ47006.1| hypothetical conserved protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 422

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 49  SSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106
             GH +F + D+   +    ++  G L ++     EG    V+G +          + +E
Sbjct: 285 KGGHVFFRVGDDDGEVVCAAYRPTGGLRRVVQQLIEGDVVKVMGAVK--EKPEGLTLNVE 342

Query: 107 SLI 109
            + 
Sbjct: 343 KIE 345


>gi|309798023|ref|ZP_07692400.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           145-7]
 gi|308118399|gb|EFO55661.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           145-7]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|282876970|ref|ZP_06285819.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281300924|gb|EFA93244.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 358

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 9/132 (6%)

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
                 +  L    +  +E    R    ++ +  +I +D ++  + K ++        ++
Sbjct: 99  QQHNQEMQELAELDKQEMENEYQRFADQYSEMKTQISNDSIVAQLTKEQEKTERLLNELK 158

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           Q+     R         IA L       +  +      I  L  R+   L+ +       
Sbjct: 159 QVKSNDARE--------IARLKKELATVRAVLRSYVMEIDSL-NRLNQNLTKENTRIKGE 209

Query: 442 VSITTRILQSFA 453
                R ++  +
Sbjct: 210 YEAANRQIEGLS 221


>gi|223930115|gb|ACN24699.1| hypothetical protein lmo1574 [Listeria monocytogenes]
          Length = 458

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 372 ELQLIINKAE 381


>gi|218703108|ref|YP_002410737.1| putative tail length tape measure protein from putative prophage
           [Escherichia coli IAI39]
 gi|218373094|emb|CAR20986.1| putative tail length tape measure protein from putative prophage
           [Escherichia coli IAI39]
          Length = 1031

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 630

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689

Query: 457 TLKR 460
            L R
Sbjct: 690 VLAR 693


>gi|220908968|ref|YP_002484279.1| 2-alkenal reductase [Cyanothece sp. PCC 7425]
 gi|219865579|gb|ACL45918.1| 2-alkenal reductase [Cyanothece sp. PCC 7425]
          Length = 397

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA-IVINKAP 503
           L  G+    +     +T    +     + + F DG+  A  V+ K P
Sbjct: 115 LGSGFVI--NPRGLILTNAHVVDQADTVTVTFQDGRILAGRVLGKDP 159


>gi|117626720|ref|YP_860043.1| putative tail component of prophage CP-933K [Escherichia coli APEC
           O1]
 gi|115515844|gb|ABJ03919.1| putative tail component of prophage CP-933K [Escherichia coli APEC
           O1]
          Length = 1024

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 505 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 564

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 565 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 623

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 624 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 682

Query: 457 TLKR 460
            L R
Sbjct: 683 VLAR 686


>gi|109113818|ref|XP_001110924.1| PREDICTED: myosin-XVIIIa-like isoform 5 [Macaca mulatta]
          Length = 2039

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/195 (7%), Positives = 60/195 (30%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +      L
Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTVL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|22538002|ref|NP_688853.1| prophage LambdaSa2, single-strand binding protein [Streptococcus
           agalactiae 2603V/R]
 gi|37999688|sp|Q8DXI7|SSB4_STRA5 RecName: Full=Single-stranded DNA-binding protein 4; Short=SSB 4;
           AltName: Full=Helix-destabilizing protein 4
 gi|22534904|gb|AAN00726.1|AE014276_7 prophage LambdaSa2, single-strand binding protein [Streptococcus
           agalactiae 2603V/R]
          Length = 138

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSKYQIIIESL 108
           I+ ++W+     +    ++G+   + G+I T  +      +I +  +
Sbjct: 49  INCVMWRQQAENLANWTKKGMLIGITGRIQTRSYENQQGQRIYVTEV 95


>gi|218561591|ref|YP_002394504.1| tail length tape measure protein from prophage [Escherichia coli
           S88]
 gi|218368360|emb|CAR06179.1| putative tail length tape measure protein from putative prophage
           [Escherichia coli S88]
          Length = 1031

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 630

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689

Query: 457 TLKR 460
            L R
Sbjct: 690 VLAR 693


>gi|24660442|gb|AAH39612.1| MYO18A protein [Homo sapiens]
          Length = 2002

 Score = 37.4 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1634 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1693

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1694 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1753

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1754 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1813

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1814 NMEKLTEERDQRIAA 1828


>gi|321451703|gb|EFX63268.1| hypothetical protein DAPPUDRAFT_119365 [Daphnia pulex]
          Length = 898

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 3/165 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
                            +        +AL    + L       +R  R  +  L     R
Sbjct: 217 RQQHQARKRAADDTETAEEQRARLQAQALR--KKYLRRDESEAERSSRLQDQALRQKSLR 274

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHM 404
                    +R++   L  +  + ++   E+   ++ Q  +Q        + E  + L  
Sbjct: 275 NEESEAEKSSRLREQALRQHSLRKKESEAERSARLQDQAQRQKSLRNEESEAENSSRLRE 334

Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              +  +         K    R + +    +++  T +    R L
Sbjct: 335 QTLRQNSLRKEESEAEKWARQRTQALHQKNLRTKETELGAANRQL 379


>gi|297579761|ref|ZP_06941688.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           RC385]
 gi|297535407|gb|EFH74241.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae
           RC385]
          Length = 570

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L          I  ++Q    KQQ + Q      + 
Sbjct: 138 NQQVREQETDPELVELASALKQSQLQAEHELSQRRILHSKQRHFRKQQRL-QAEALPEKE 196

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256

Query: 448 IL 449
            L
Sbjct: 257 KL 258


>gi|194760665|ref|XP_001962559.1| GF14380 [Drosophila ananassae]
 gi|190616256|gb|EDV31780.1| GF14380 [Drosophila ananassae]
          Length = 8366

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/182 (7%), Positives = 43/182 (23%), Gaps = 8/182 (4%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS------RYRLDRL 331
                   + +  +         ++ +          L +    LS          +   L
Sbjct: 7118 WRQYLQHVQSFLSCAIPEDYGSLREQQQLCAIHQNLLISQQSVLSEMPLESEVSEQYKAL 7177

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                   L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 7178 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREVERNALQLRYIHLKRVP 7237

Query: 392  FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             L+ +    +  L    +Q+K          +     +   +  +  S    +      L
Sbjct: 7238 HLKNRLDAMLQQLDQGEQQSKALQEQQQELSRHCDDALATAMRMEQASIGQRIGNLRAAL 7297

Query: 450  QS 451
            ++
Sbjct: 7298 KT 7299


>gi|148239736|ref|YP_001225123.1| putative ATPase involved in DNA repair [Synechococcus sp. WH 7803]
 gi|147848275|emb|CAK23826.1| Putative ATPase involved in DNA repair [Synechococcus sp. WH 7803]
          Length = 894

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              E       ++  + +       L+    + Q L  +   L  L       L+    R
Sbjct: 204 QQSELWKRRQELQQAEQRHRDACQQLEMYEAACQELDRNEQALRDLETVQAPALQQQRRR 263

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
               F  + +  +S   +   ++ R+  L+    ++   +   R I   +++       +
Sbjct: 264 ----FTTLRDLQRSLAPLIQEEQQRKQQLKTLMSLDAETESTDRSIQAHRRDLEKAGDQV 319

Query: 406 REQTKNR---------IFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRIL 449
            +Q++           +      +++    +        L  +I+       +  R+L
Sbjct: 320 AQQSEQLKARQASLNALEEQRQALEERGHSLRRQQEIRTLETRIRDYQQRADLRARLL 377


>gi|118086424|ref|XP_001231411.1| PREDICTED: similar to desmoplakin isoform II isoform 1 [Gallus
            gallus]
          Length = 2263

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 50/162 (30%), Gaps = 10/162 (6%)

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL--EIIIFRK 346
            +      +  L++ +          L  +   +  S+ + + + +E E  L     + + 
Sbjct: 1172 KEYEIERLRVLLQDEGTRKREYENELAKASNRIQESKNQYNHIMQERETLLIKMSALEQD 1231

Query: 347  YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE--KIAILHM 404
                  +   +        ++ N +     +Q +E   +Q L  +   K +  +      
Sbjct: 1232 KARLQRLEEELN------RLKVNLESESRLKQRLENEKQQILNDLNQWKSQHSRTEESIR 1285

Query: 405  LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
              +  + +       ++  I R++  +    +     +  T 
Sbjct: 1286 KIQCEREKSEREKNTLRSEIERLQMEIKRIEERYRCRLEETA 1327


>gi|168269646|dbj|BAG09950.1| centrosomal protein 164 kDa [synthetic construct]
          Length = 1455

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930


>gi|119587725|gb|EAW67321.1| centrosomal protein 164kDa, isoform CRA_d [Homo sapiens]
          Length = 1455

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930


>gi|110804178|ref|YP_687698.1| hypothetical protein SFV_0108 [Shigella flexneri 5 str. 8401]
 gi|110613726|gb|ABF02393.1| putative membrane protein [Shigella flexneri 5 str. 8401]
          Length = 615

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 51/188 (27%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 487

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372
           Q    +R R+     EL   +   +    +  +       RI+S          +K +Q 
Sbjct: 488 QRREAARQRIQSASPELRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 547

Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            L +QQ     ++I         + +++           + + +   +     +  R+  
Sbjct: 548 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 607

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 608 RGARRLER 615


>gi|328724108|ref|XP_001942761.2| PREDICTED: hypothetical protein LOC100162845 [Acyrthosiphon pisum]
          Length = 1020

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 66/189 (34%), Gaps = 4/189 (2%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
           P          +L     ++   L +    +   + +     D+++       DR     
Sbjct: 568 PEITINDVKKPDLCTLKRSLSKDLNQESKRSKIVIERDDRKKDRSIKSKSNERDREKLRE 627

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLE 394
                  + R+ R    I+N  K       +++  Q    +++  ++ +++  +  I  +
Sbjct: 628 LERERERLEREKRRQQEILNLTKMKTERERLKQKEQERAIREEERKRRIEKERQLEIERK 687

Query: 395 KKEKIAILHMLREQTK---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +KE+   L   R++ +    RI    + + +L    + +   +++     +      L+ 
Sbjct: 688 QKEEAIRLEKERQKLRIERERIEKEKSELLRLERENQRLERERLQREKEELRRAQEKLEE 747

Query: 452 FAYKNTLKR 460
              +  LKR
Sbjct: 748 TKRQAILKR 756


>gi|327485332|gb|AEA79738.1| Pseudouridylate synthase, 23S RNA-specific [Vibrio cholerae
           LMA3894-4]
          Length = 559

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 127 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 185

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 186 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 245

Query: 448 IL 449
            L
Sbjct: 246 KL 247


>gi|297470790|ref|XP_002684752.1| PREDICTED: filamin A interacting protein 1-like isoform 1 [Bos
           taurus]
 gi|296491542|gb|DAA33585.1| filamin A interacting protein 1-like isoform 1 [Bos taurus]
          Length = 1130

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 7/199 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINL---EARLNNIIIRLIKYKINTLNSLLKALPNS 317
           D+         ++    KE  +  L  L   E      I+ L + K      + K+    
Sbjct: 131 DIYEKPMNELDKVVEQHKESHRRILEQLLMAEKSHRQTILELEEEKRKHKEYMEKSDEFI 190

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
              L     RL RL  +   + E     K +    +   +        +  + Q  L  Q
Sbjct: 191 S-LLEQECERLKRLIDQETESREKKEQEKEKRVTALKEELTKLKSFALMVVDEQQRLTAQ 249

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHK 434
             +++   Q L     E   K+A+     ++ + +   L   ++   T+       +  K
Sbjct: 250 LALQRQKIQDLTTSAKETHAKLALAEARAQEEEQKATRLENELQTQTTKFHQNQETIMAK 309

Query: 435 IKSCHTSVSITTRILQSFA 453
           + +  +      + L + +
Sbjct: 310 LTNEDSQNRQLRQKLAALS 328


>gi|254852197|ref|ZP_05241545.1| DNA polymerase III [Listeria monocytogenes FSL R2-503]
 gi|258605503|gb|EEW18111.1| DNA polymerase III [Listeria monocytogenes FSL R2-503]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|147765511|emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]
          Length = 1207

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 57/197 (28%), Gaps = 14/197 (7%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
           V  +           AR  +  +  +K     +    +           +  RL  +   
Sbjct: 396 VKERREWAHQRAMQAARKLSHDLTELKMLRMEMEETQQLKKGKQTLEDTTMKRLSDMENA 455

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
           L          K      +    +   L   I + ++ I++ QQ + ++ +         
Sbjct: 456 LRKASGSSGSEKKCLKRLLAWEKQKTKLQEEIGEEKRKIVDLQQQMVRVEQAQKEAEVKW 515

Query: 395 KKEKIAILHMLRE-------------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           +++  A      +               K ++  L   I+    R +  L   ++   + 
Sbjct: 516 RQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQR-LEQELSR 574

Query: 442 VSITTRILQSFAYKNTL 458
           + ++ +  +     NTL
Sbjct: 575 LKVSAQSTELVHPLNTL 591


>gi|40789033|dbj|BAA83004.2| KIAA1052 protein [Homo sapiens]
          Length = 1456

 Score = 37.4 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 787 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 842

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 843 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 902

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 903 LETVRQEQHKRLEDLRRRHREQERKLQDL 931


>gi|27529702|dbj|BAA13206.2| KIAA0216 [Homo sapiens]
          Length = 2067

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1684 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1743

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1744 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1803

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1804 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1863

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1864 NMEKLTEERDQRIAA 1878


>gi|308068158|ref|YP_003869763.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681]
 gi|305857437|gb|ADM69225.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681]
          Length = 674

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 58/205 (28%), Gaps = 11/205 (5%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
              A      A +   ++       +      +  +   +         L +     +  
Sbjct: 270 HQEAQKRADEAALEQEIRVEELQEQLEQVQAGSTELSSRLGEAQEQARVLKQQQSELESV 329

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L   R       +      E +  R  +         +    +   Q+  Q +LE+    
Sbjct: 330 LETQRQVAIEREQADTLAREELQSRYDQLEAEAKAAQQQTAKLEEEQRRMQKLLEQAHVS 389

Query: 381 EQIVK----------QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
            + ++          +  R +  E++  +  L +   + + +   +   ++  ++ +E  
Sbjct: 390 SRKLQSELATLAESEKSWRKLAEERQLAVDELELSLLEAREQKEAIQEQLQHAVSELE-A 448

Query: 431 LSHKIKSCHTSVSITTRILQSFAYK 455
           +  K  S    +      ++  + +
Sbjct: 449 IKDKFASQQQRLVQLEARIKELSPE 473


>gi|260855273|ref|YP_003229164.1| putative tail length tape measure protein [Escherichia coli O26:H11
           str. 11368]
 gi|257753922|dbj|BAI25424.1| putative tail length tape measure protein [Escherichia coli O26:H11
           str. 11368]
 gi|323156734|gb|EFZ42872.1| phage tail tape measure protein, lambda family [Escherichia coli
           EPECa14]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|123229684|emb|CAM22596.1| 5-azacytidine induced 1 [Mus musculus]
          Length = 1060

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%)

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I   + ++    + R  P  + ++L  G GS         ++ +     +   +  A+
Sbjct: 512 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 571

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
             + D T+       R           +  ++    + I       + +I   K      
Sbjct: 572 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 625

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362
            +++  L + DQ       ++          L+ ++      R+ +  N    +IK   +
Sbjct: 626 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 685

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421
                + ++ I + +Q + ++   H   +   +++         E+ +  +      + +
Sbjct: 686 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 745

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449
           +   R +      ++    ++    R L
Sbjct: 746 QERERAQQRFEQHLEQEQRALEQQRRRL 773


>gi|119587724|gb|EAW67320.1| centrosomal protein 164kDa, isoform CRA_c [Homo sapiens]
          Length = 1460

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 783 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 838

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 839 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 898

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 899 LETVRQEQHKRLEDLRRRHREQERKLQDL 927


>gi|115648142|ref|NP_055771.4| centrosomal protein of 164 kDa [Homo sapiens]
 gi|162416241|sp|Q9UPV0|CE164_HUMAN RecName: Full=Centrosomal protein of 164 kDa; Short=Cep164
 gi|157169996|gb|AAI52749.1| Centrosomal protein 164kDa [synthetic construct]
 gi|162318052|gb|AAI56877.1| Centrosomal protein 164kDa [synthetic construct]
          Length = 1460

 Score = 37.4 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 783 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 838

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 839 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 898

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 899 LETVRQEQHKRLEDLRRRHREQERKLQDL 927


>gi|308494581|ref|XP_003109479.1| CRE-SYD-2 protein [Caenorhabditis remanei]
 gi|308245669|gb|EFO89621.1| CRE-SYD-2 protein [Caenorhabditis remanei]
          Length = 1180

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 72/242 (29%), Gaps = 10/242 (4%)

Query: 216 RGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275
           R  GSI          +  A+      + +++    + T  +   + +    T     A 
Sbjct: 264 RTNGSISSESANRLIEMQEALERMKTELANSLKQSNEVTTRNAELEDQLTEDTREKHAAQ 323

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPR 333
                L++ +  L+A+  +   R+   +    T       + + +  L       D   R
Sbjct: 324 ESIVRLKNQICELDAQRTDQETRITTLESRFLTAQRESTCIRDLNDKLEHQLANKDAAVR 383

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
             E  +  +  R       +   +K        +       E QQ +E +     + +  
Sbjct: 384 LNEEKVHSLQERLELAEKQLAQSLK------KAESLPSVEAELQQRMEALTAAEQKSVSA 437

Query: 394 EKK-EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQS 451
           E++ +++       +    R        ++   R+   +   +   +  +       +Q+
Sbjct: 438 EERIQRLDRNIQELQAELERAVQRERMNEEHSQRLSSTVDKLLSESNDRLQLHLKERMQA 497

Query: 452 FA 453
             
Sbjct: 498 LD 499


>gi|229587954|ref|YP_002870073.1| putative TetR family regulatory protein [Pseudomonas fluorescens
           SBW25]
 gi|229359820|emb|CAY46670.1| putative TetR-family regulatory protein [Pseudomonas fluorescens
           SBW25]
          Length = 207

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 7/116 (6%)

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
           F    N +          +          H+      H R++F +       L  L +  
Sbjct: 54  FERFQNELAPLLDPPADAQLEAEDYWLFLHLIVERMAHYRFLFQDLSNLAGRLPKLAKGI 113

Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460
           +N +  L   +  L+ R++     ++ S   ++           L S  Y+  L R
Sbjct: 114 RNLLTALKRTLASLLARLKAA--GQLVSGTQALGQLVEQITLTLLFSLDYQRILDR 167


>gi|25089760|sp|Q62036|AZI1_MOUSE RecName: Full=5-azacytidine-induced protein 1; AltName:
           Full=Pre-acrosome localization protein 1
 gi|1199931|dbj|BAA07868.1| pre-acrosome localization protein [Mus musculus]
 gi|1912072|dbj|BAA19002.1| AZ-1 [Mus musculus]
 gi|148702778|gb|EDL34725.1| 5-azacytidine induced gene 1 [Mus musculus]
          Length = 1060

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%)

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I   + ++    + R  P  + ++L  G GS         ++ +     +   +  A+
Sbjct: 512 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 571

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
             + D T+       R           +  ++    + I       + +I   K      
Sbjct: 572 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 625

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362
            +++  L + DQ       ++          L+ ++      R+ +  N    +IK   +
Sbjct: 626 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 685

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421
                + ++ I + +Q + ++   H   +   +++         E+ +  +      + +
Sbjct: 686 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 745

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449
           +   R +      ++    ++    R L
Sbjct: 746 QERERAQQRFEQHLEQEQRALEQQRRRL 773


>gi|332872363|ref|XP_003319184.1| PREDICTED: pericentrin [Pan troglodytes]
          Length = 3271

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%)

Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326
                +     +   +     L+      +  ++        S  + + N  +       
Sbjct: 673 TELMKQEFQRKEMDWKVLKEELQREAEEKLTSMLLELREKAESEKQTIINKFELREAEMR 732

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           +L         +LE  +  +      +   + SD  +H  Q  R+     Q      +  
Sbjct: 733 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 791

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
                      +   L   +E T+         +++   +    L    +     +   T
Sbjct: 792 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELRLLQERHQQQLLSVT 851

Query: 447 RILQS 451
             L++
Sbjct: 852 AELEA 856


>gi|326913186|ref|XP_003202921.1| PREDICTED: amyloid beta A4 protein-like, partial [Meleagris
           gallopavo]
          Length = 530

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S +P  +A   +       T  D              E 
Sbjct: 101 GGCGGNRNNFDSEEYCMAVCGSVLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 160

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 161 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 218

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 219 ARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 278

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 279 DPKKAAQIRSQVMTHLRVIYERMNQSLSFLYN 310


>gi|297700411|ref|XP_002827239.1| PREDICTED: LOW QUALITY PROTEIN: myosin-XVIIIa-like [Pongo abelii]
          Length = 2039

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|294101613|ref|YP_003553471.1| SMC domain protein [Aminobacterium colombiense DSM 12261]
 gi|293616593|gb|ADE56747.1| SMC domain protein [Aminobacterium colombiense DSM 12261]
          Length = 1139

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/230 (9%), Positives = 56/230 (24%), Gaps = 19/230 (8%)

Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--- 312
            D             A +                  +   +  + +Y+    ++  K   
Sbjct: 117 LDDVKRQWHMEGEQFAFIGQGEVAEAIHHRPQQRRSILEALFGIDQYRKKREDANQKLKF 176

Query: 313 ---ALPNSDQTLSCSRYRLDRLPRELEHNLE-IIIFRKYRHFNHIINRIKSDFLIHNIQK 368
               L   +  +S    R D +   +    +   +  +           +  FL   +  
Sbjct: 177 ASEELARLETLVSELTSRRDEIAAMVTIAEKARRLLDELDEKRRGYYFSRRAFLERELYS 236

Query: 369 NRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
            +  I   ++   +  +     +      +         ++  + R   L    + L  +
Sbjct: 237 FQSRIHALERRKNRAAEWETIWKEGLSFYQSLFNSYEQQKKVHEERTESLGFQRETLRRQ 296

Query: 427 I-------EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG--YTSIQD 467
                   +      I            +L     + TL RG  Y+  Q+
Sbjct: 297 CFATALTVKSARERLIAQKEEK-RHVEEVLSKVDEEATLARGTSYSLTQN 345


>gi|223930175|gb|ACN24739.1| hypothetical protein lmo1574 [Listeria monocytogenes]
          Length = 458

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 372 ELQLIINKAE 381


>gi|223930145|gb|ACN24719.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930148|gb|ACN24721.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930172|gb|ACN24737.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930220|gb|ACN24769.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930256|gb|ACN24793.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930259|gb|ACN24795.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930298|gb|ACN24821.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930328|gb|ACN24841.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930331|gb|ACN24843.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930334|gb|ACN24845.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930364|gb|ACN24865.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930397|gb|ACN24887.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930427|gb|ACN24907.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930430|gb|ACN24909.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930433|gb|ACN24911.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930436|gb|ACN24913.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930439|gb|ACN24915.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930442|gb|ACN24917.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930445|gb|ACN24919.1| hypothetical protein lmo1574 [Listeria monocytogenes]
          Length = 458

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 372 ELQLIINKAE 381


>gi|254824367|ref|ZP_05229368.1| DNA polymerase III [Listeria monocytogenes FSL J1-194]
 gi|293593601|gb|EFG01362.1| DNA polymerase III [Listeria monocytogenes FSL J1-194]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|254992099|ref|ZP_05274289.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes FSL
            J2-064]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|300766000|ref|ZP_07075971.1| DNA polymerase III, alpha subunit [Listeria monocytogenes FSL N1-017]
 gi|300513318|gb|EFK40394.1| DNA polymerase III, alpha subunit [Listeria monocytogenes FSL N1-017]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|254931514|ref|ZP_05264873.1| DNA polymerase III [Listeria monocytogenes HPB2262]
 gi|293583067|gb|EFF95099.1| DNA polymerase III [Listeria monocytogenes HPB2262]
 gi|328474924|gb|EGF45724.1| DNA polymerase III, alpha subunit [Listeria monocytogenes 220]
 gi|332312016|gb|EGJ25111.1| DNA polymerase III subunit alpha [Listeria monocytogenes str. Scott
            A]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|126297932|ref|XP_001371107.1| PREDICTED: similar to hamartin [Monodelphis domestica]
          Length = 1151

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/173 (8%), Positives = 59/173 (34%), Gaps = 2/173 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +  Q+    L+   + ++ +L        +   +   N  Q L         +  +L 
Sbjct: 740 SLQKEQARYNQLQEERDTVVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIADLR 798

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  +  
Sbjct: 799 LELKKANNKVCHRELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQNKHA 858

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 859 DTTQEVEMMKTSYRKELEKNRSHLLQQNQRLDTSQKRIVE-LESHLAKKDHLL 910


>gi|294345409|ref|NP_033864.3| 5-azacytidine-induced protein 1 [Mus musculus]
 gi|123229683|emb|CAM22595.1| 5-azacytidine induced 1 [Mus musculus]
 gi|187954399|gb|AAI41109.1| 5-azacytidine induced gene 1 [Mus musculus]
          Length = 1059

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%)

Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247
           + I   + ++    + R  P  + ++L  G GS         ++ +     +   +  A+
Sbjct: 511 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 570

Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307
             + D T+       R           +  ++    + I       + +I   K      
Sbjct: 571 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 624

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362
            +++  L + DQ       ++          L+ ++      R+ +  N    +IK   +
Sbjct: 625 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 684

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421
                + ++ I + +Q + ++   H   +   +++         E+ +  +      + +
Sbjct: 685 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 744

Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449
           +   R +      ++    ++    R L
Sbjct: 745 QERERAQQRFEQHLEQEQRALEQQRRRL 772


>gi|119587723|gb|EAW67319.1| centrosomal protein 164kDa, isoform CRA_b [Homo sapiens]
          Length = 1463

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930


>gi|42794779|ref|NP_976063.1| myosin-XVIIIa isoform b [Homo sapiens]
 gi|119571562|gb|EAW51177.1| hCG27198, isoform CRA_c [Homo sapiens]
 gi|119571564|gb|EAW51179.1| hCG27198, isoform CRA_c [Homo sapiens]
          Length = 2039

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|46907805|ref|YP_014194.1| DNA polymerase III, alpha subunit [Listeria monocytogenes serotype 4b
            str. F2365]
 gi|46881074|gb|AAT04371.1| DNA polymerase III, alpha subunit [Listeria monocytogenes serotype 4b
            str. F2365]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|28416946|ref|NP_510880.2| myosin-XVIIIa isoform a [Homo sapiens]
 gi|33301318|sp|Q92614|MY18A_HUMAN RecName: Full=Myosin-XVIIIa; AltName: Full=Molecule associated with
            JAK3 N-terminus; Short=MAJN; AltName: Full=Myosin
            containing a PDZ domain
 gi|119571568|gb|EAW51183.1| hCG27198, isoform CRA_h [Homo sapiens]
 gi|168274483|dbj|BAG09661.1| myosin-XVIIIa [synthetic construct]
          Length = 2054

 Score = 37.4 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|301025093|ref|ZP_07188687.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           69-1]
 gi|300396202|gb|EFJ79740.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           69-1]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|281203000|gb|EFA77201.1| hypothetical protein PPL_12409 [Polysphondylium pallidum PN500]
          Length = 307

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
           +I I +    +  +   + +        K++Q ++  ++     + +  +     K   I
Sbjct: 83  QINILQLNNLYEELNTSLSNPHPKR---KSKQELINAKRKHRHTITELQQQQLNNKDHTI 139

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSVSITTRILQSFA 453
             L        + +  L   +     +IE + +  H +      ++I  + ++S  
Sbjct: 140 TELQQQLNNKDHAMAELKQQLNNKDQQIESLNNKVHTVTEQQQQLNIKDQQIESLN 195


>gi|223930109|gb|ACN24695.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930130|gb|ACN24709.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930166|gb|ACN24733.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930199|gb|ACN24755.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930205|gb|ACN24759.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930262|gb|ACN24797.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930322|gb|ACN24837.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930343|gb|ACN24851.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930373|gb|ACN24871.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930379|gb|ACN24875.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930409|gb|ACN24895.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930412|gb|ACN24897.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930418|gb|ACN24901.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930421|gb|ACN24903.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930424|gb|ACN24905.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930448|gb|ACN24921.1| hypothetical protein lmo1574 [Listeria monocytogenes]
 gi|223930466|gb|ACN24933.1| hypothetical protein lmo1574 [Listeria monocytogenes]
          Length = 458

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 372 ELQLIINKAE 381


>gi|255522861|ref|NP_001157333.1| glial fibrillary acidic protein [Equus caballus]
          Length = 427

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 63/218 (28%), Gaps = 19/218 (8%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
               +  E  L       +       +    A  + ++ +      +  L +  E  +  
Sbjct: 146 LRQKLQDETNLRLEAENNLAAYRQEADEATLARVDLERKIESLEEEIRFLRKIHEEEVRE 205

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
           +  +  +   H+   +    L   +++ R              ++  R  F +  +  A 
Sbjct: 206 LQEQLAQQQVHVELDVAKPDLTAALREIRTQYEAMASSNMHEAEEWYRSKFADLTDAAAR 265

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEF------ILSHKIKSCHTSVSITTRILQSFAYK 455
              L  Q K+        ++ L   +E        L  +++      +      ++ +Y+
Sbjct: 266 NAELLRQAKHEANDYRRQLQALTCDLESLRGTNESLERQMREQEERHAR-----EAASYQ 320

Query: 456 NTLKRGYTSIQDTNNNFITQ--KRNLAT-KTRILINFF 490
            TL R      +     +     R+L   +  + +   
Sbjct: 321 ETLAR-----LEEEGQTLKDEMARHLQEYQDLLNVKLA 353


>gi|119571569|gb|EAW51184.1| hCG27198, isoform CRA_i [Homo sapiens]
          Length = 2057

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1674 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1733

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1734 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1793

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1794 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1853

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1854 NMEKLTEERDQRIAA 1868


>gi|54633200|dbj|BAD66836.1| KIAA0216 splice variant 1 [Homo sapiens]
          Length = 2046

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1663 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1722

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1723 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1782

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1783 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1842

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1843 NMEKLTEERDQRIAA 1857


>gi|54633204|dbj|BAD66838.1| KIAA0216 splice variant 2 [Homo sapiens]
          Length = 1715

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1347 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1406

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1407 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1466

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1467 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1526

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1527 NMEKLTEERDQRIAA 1541


>gi|47094219|ref|ZP_00231932.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 4b
            H7858]
 gi|226224175|ref|YP_002758282.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes
            Clip81459]
 gi|47017408|gb|EAL08228.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 4b
            H7858]
 gi|225876637|emb|CAS05346.1| Putative DNA polymerase III (alpha subunit) DnaE [Listeria
            monocytogenes serotype 4b str. CLIP 80459]
 gi|328465072|gb|EGF36346.1| DNA polymerase III, alpha subunit [Listeria monocytogenes 1816]
          Length = 1108

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40   EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
            E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 964  EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021

Query: 100  KYQIIIESLI 109
            + Q+II    
Sbjct: 1022 ELQLIINKAE 1031


>gi|332098996|gb|EGJ03943.1| phage tail tape measure protein, lambda family [Shigella
           dysenteriae 155-74]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|325127621|gb|EGC50537.1| chromosome segregation protein SMC [Neisseria meningitidis N1568]
          Length = 1161

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/151 (9%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      R+    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQRIERYKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQTEEKQ 353


>gi|291567264|dbj|BAI89536.1| DNA polymerase III alpha subunit [Arthrospira platensis NIES-39]
          Length = 1219

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 35   VCVRGEISGYRGI-HSSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91
            V V   +   +      G   A+  L+D   +IDA+++  +   ++   +E    ++ GK
Sbjct: 1033 VKVAATLINIKPHLTKKGDRMAFLLLEDLTGQIDAVVFPSSYEAVQQELKENAVVVIEGK 1092

Query: 92   ITTFPGSSKYQIIIESLIPSGS 113
            +       + QII+E++  +  
Sbjct: 1093 VE--KRDDQTQIIVEAIKSADE 1112


>gi|289167846|ref|YP_003446115.1| DNA-polymerase III alpha-chain [Streptococcus mitis B6]
 gi|288907413|emb|CBJ22250.1| DNA-polymerase III alpha-chain [Streptococcus mitis B6]
          Length = 1042

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 24  LKHIVESNLSHVCVRGE-ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82
           + ++ E++ + + +  + I   R       A+  + D+  ++D  ++     ++     E
Sbjct: 887 ISNLSENSYAIILIEVQKIKVIRTKKGENMAFLQVDDSKKKLDVTLFSDLYRRVGQEVRE 946

Query: 83  GIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           G  + + GK+       + Q+I + +  +
Sbjct: 947 GDFYYIKGKVQ--SRDGRLQMIAQEIREA 973


>gi|191173153|ref|ZP_03034685.1| gifsy-1 prophage VmtH [Escherichia coli F11]
 gi|300992769|ref|ZP_07180046.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           200-1]
 gi|190906538|gb|EDV66145.1| gifsy-1 prophage VmtH [Escherichia coli F11]
 gi|300305265|gb|EFJ59785.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           200-1]
 gi|324010853|gb|EGB80072.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           60-1]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +      + +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWMASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHLREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|320172945|gb|EFW48174.1| Phage tail length tape-measure protein 1 [Shigella dysenteriae CDC
           74-1112]
          Length = 1021

 Score = 37.4 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|292491800|ref|YP_003527239.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus
           halophilus Nc4]
 gi|291580395|gb|ADE14852.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus
           halophilus Nc4]
          Length = 823

 Score = 37.4 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/196 (9%), Positives = 59/196 (30%), Gaps = 5/196 (2%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
           A   +   +       +   R    +  L +       +L  +  +S+     ++ R  +
Sbjct: 234 ARHKLEQTQTELQRRQSGVNRSQQELNTLQEQLAQKKAALADSGRSSEILRLEAQLREQK 293

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI---QKNRQHILEKQQHIEQIVKQH 387
                +  L + +          +  +K           ++ +    E     E I    
Sbjct: 294 AKLYRKQQLIVRLEETAVQQRQTLKHLKQGAARFATDTTEEIKTLKAELGHRNEDITALR 353

Query: 388 LRYIFLEKKEKIAILHMLREQTKN--RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
            +    +++ + A   + ++  K+  ++          + RI    S  ++     +   
Sbjct: 354 QQLTATQEQLQKARTDLEQQDKKSSAKLAQFKQQQLLELERINQKQSESLEQQKARIKEL 413

Query: 446 TRILQSFAYKNTLKRG 461
             +L + + +  L +G
Sbjct: 414 ETLLATESREKALAQG 429


>gi|112959018|gb|ABI26998.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959045|gb|ABI27016.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959108|gb|ABI27058.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
          Length = 441

 Score = 37.4 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 297 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 354

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 355 ELQLIINKAE 364


>gi|78187531|ref|YP_375574.1| chromosome segregation protein SMC [Chlorobium luteolum DSM 273]
 gi|78167433|gb|ABB24531.1| Chromosome segregation protein SMC [Chlorobium luteolum DSM 273]
          Length = 1177

 Score = 37.4 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/213 (8%), Positives = 57/213 (26%), Gaps = 20/213 (9%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
            E    L              AA MA       ++ +  L+        +L   +     
Sbjct: 238 QEKVDPLEGRIRQEEMQNHELAARMACEDSAIQEAEVRQLQEE-----EKLSDSQKRLNA 292

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
                     + L  +               L     R+    + +   +++        
Sbjct: 293 CNEAVHELEKRILQQTEQEKKLTADIQRVTTLAAEKARQIEREDALSGELEARRPG---- 348

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIKK 422
              +   E ++    + ++H +     ++++ ++         +++  NR+      ++ 
Sbjct: 349 -TEEKCSELEERYNALAREHDQLNATLREQRNSLARERSASAEQQKEANRLAMQRQSLEA 407

Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
               ++  L+       T        L++ +  
Sbjct: 408 RKEHLQSTLARLAARKRT----AEEKLEAASPL 436


>gi|317504611|ref|ZP_07962580.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315664282|gb|EFV03980.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 169

 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 43/142 (30%), Gaps = 9/142 (6%)

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +           ++   R    E+ + +E    +        +++   ++   R+   
Sbjct: 32  EALKAMPGYAVSERDMAALRAKYEEEGKRVEDDFNKKYEQFLDGQRDFAPLILQKRQAEL 91

Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSC-HTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469
             +   +   K    R+      + K+     +      + +       +RGY  I +T+
Sbjct: 92  QEMMEKNVAFKNESKRLLDQADAESKAALKVRLRAIVARIGA-------ERGYAFILNTD 144

Query: 470 NNFITQKRNLATKTRILINFFD 491
           N+ +    N+     I     D
Sbjct: 145 NDAVPYVNNI-VGEDINALVKD 165


>gi|301611171|ref|XP_002935124.1| PREDICTED: LOW QUALITY PROTEIN: centrosomal protein of 63
           kDa-A-like [Xenopus (Silurana) tropicalis]
          Length = 623

 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 19/171 (11%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS----- 359
                +     + +  L     ++D +        E                +KS     
Sbjct: 9   QQQERMGSLQGSCEAELQELMRQIDIMLDHKRSQWEAETETLKTRLELKEQELKSSLDRE 68

Query: 360 DFLIHNIQKNRQHILEKQ--------QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411
           D L   +++ RQ +++++        Q+  Q+         L+K  +      LR + KN
Sbjct: 69  DHLNQEVRRLRQQLIQQEEETQNKTVQYEAQLSGFKEELNRLKKSYEKVQKKHLRSEMKN 128

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTS------VSITTRILQSFAYKN 456
           ++    + + +L  R+E      +            ++      ++ + + 
Sbjct: 129 KVDEERSEVSRLTRRLEEFRQRSLDWEKQRLLYQQQLAGLEAQRKTLSEQA 179


>gi|187731189|ref|YP_001878925.1| hypothetical protein SbBS512_E0110 [Shigella boydii CDC 3083-94]
 gi|187428181|gb|ACD07455.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
 gi|320185764|gb|EFW60519.1| Putative exported protein [Shigella flexneri CDC 796-83]
 gi|332098856|gb|EGJ03807.1| hypothetical protein SB359474_0077 [Shigella boydii 3594-74]
          Length = 617

 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 430 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQ 489

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370
           Q    +R R+     E    +   +    +  +  +    RI+S             + R
Sbjct: 490 QRREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQR 549

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429
               +++ +  Q V+          +E++      R    NR   L+   +     R+  
Sbjct: 550 PLNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSE 609

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 610 RGARRLER 617


>gi|118094253|ref|XP_422300.2| PREDICTED: similar to translocated promoter region (to activated MET
            oncogene) [Gallus gallus]
          Length = 2368

 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 4/222 (1%)

Query: 229  DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
            DE    A     +   + + HE   +L+D            A  +++  +   Q  ++ +
Sbjct: 1143 DEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEI 1202

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
               +      + + +               + L      +          +++      +
Sbjct: 1203 LRFIRRE-KEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQ 1261

Query: 349  HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
            H   +      + LI   +  R+     +Q ++Q+  +  +         +   +    +
Sbjct: 1262 HEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADIL--PLQESNAELSE 1319

Query: 409  TKNRIFYLHTHIKKLITRIEFILSHKIKSCH-TSVSITTRIL 449
                +      +++ + R +    H +     T +    ++L
Sbjct: 1320 KSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLL 1361


>gi|112959021|gb|ABI27000.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959024|gb|ABI27002.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959027|gb|ABI27004.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959030|gb|ABI27006.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959033|gb|ABI27008.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959036|gb|ABI27010.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959039|gb|ABI27012.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959042|gb|ABI27014.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959048|gb|ABI27018.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959051|gb|ABI27020.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959054|gb|ABI27022.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959057|gb|ABI27024.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959060|gb|ABI27026.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959063|gb|ABI27028.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959066|gb|ABI27030.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959069|gb|ABI27032.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959072|gb|ABI27034.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959075|gb|ABI27036.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959078|gb|ABI27038.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959081|gb|ABI27040.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959084|gb|ABI27042.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959087|gb|ABI27044.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959090|gb|ABI27046.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959093|gb|ABI27048.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959096|gb|ABI27050.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959099|gb|ABI27052.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959102|gb|ABI27054.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959105|gb|ABI27056.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959111|gb|ABI27060.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959114|gb|ABI27062.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959117|gb|ABI27064.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959120|gb|ABI27066.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959123|gb|ABI27068.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959126|gb|ABI27070.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959129|gb|ABI27072.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959132|gb|ABI27074.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959135|gb|ABI27076.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959138|gb|ABI27078.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959141|gb|ABI27080.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959144|gb|ABI27082.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959147|gb|ABI27084.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959150|gb|ABI27086.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959153|gb|ABI27088.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959156|gb|ABI27090.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959159|gb|ABI27092.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959162|gb|ABI27094.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959165|gb|ABI27096.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959168|gb|ABI27098.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959171|gb|ABI27100.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959174|gb|ABI27102.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959177|gb|ABI27104.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959180|gb|ABI27106.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959183|gb|ABI27108.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959186|gb|ABI27110.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959189|gb|ABI27112.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959192|gb|ABI27114.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959195|gb|ABI27116.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959198|gb|ABI27118.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112959201|gb|ABI27120.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
          Length = 441

 Score = 37.4 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 297 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 354

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 355 ELQLIINKAE 364


>gi|169636459|ref|NP_001038576.1| liprin-alpha-2 [Danio rerio]
 gi|94732311|emb|CAH68863.2| novel protein similar to vertebrate protein tyrosine phosphatase,
           receptor type, f polypeptide (PTPRF), interacting
           protein (liprin), alpha 2 (PPFIA2) [Danio rerio]
 gi|94732384|emb|CAH69028.2| novel protein similar to vertebrate protein tyrosine phosphatase,
           receptor type, f polypeptide (PTPRF), interacting
           protein (liprin), alpha 2 (PPFIA2) [Danio rerio]
 gi|94733098|emb|CAK11291.1| novel protein similar to vertebrate protein tyrosine phosphatase,
           receptor type, f polypeptide (PTPRF), interacting
           protein (liprin), alpha 2 (PPFIA2) [Danio rerio]
 gi|94734001|emb|CAK10733.1| novel protein similar to vertebrate protein tyrosine phosphatase,
           receptor type, f polypeptide (PTPRF), interacting
           protein (liprin), alpha 2 (PPFIA2) [Danio rerio]
          Length = 1236

 Score = 37.4 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/352 (9%), Positives = 107/352 (30%), Gaps = 24/352 (6%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 205

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++      KV   +  +++           +  +    +    A     +++L    +
Sbjct: 206 AHIQR-----KVASGDGAEDLLEGTDAQKLHSKRLSNGSMESGDEASQVVELQELLEKQN 260

Query: 230 EMIVRAIANSSIPI--ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
             + +     S     +S +  E +    D                     +       +
Sbjct: 261 YELAQMKERMSSLSSRVSEVEQELETARKDLI------KSEDMNNKFQRDIKEAMCQKED 314

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347
           +E R+  +  R +       ++ L  + +  +    ++    R   E    L+  +    
Sbjct: 315 MEERIVTLEKRYLSA--QRESTSLHDITDKLENELANKEAFLRQMEEKNRQLQERLELAE 372

Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
           +     + + ++   +      R   L K +     +++ +R++  + +EK   L   R+
Sbjct: 373 QKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRHLEGQLEEKNQELLRARQ 432

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
           +            ++   R+   +   +   +  +       + +   KN L
Sbjct: 433 R--------EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 476


>gi|320654217|gb|EFX22280.1| putative tail component of prophage CP-933K [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320664717|gb|EFX31860.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. LSU-61]
          Length = 1021

 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|149571569|ref|XP_001518991.1| PREDICTED: similar to protein kinase, partial [Ornithorhynchus
           anatinus]
          Length = 740

 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 8/206 (3%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LNSLLKA 313
           LA   ADL     T  AE    + +  +  L   +  + +    L + + +         
Sbjct: 471 LAKQKADLELAMKTITAENRREICDKERECLNKKQELMRDREASLWELEEHHLQEKHQLV 530

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                      R+ L R   + +  ++    R          + K+        + +  +
Sbjct: 531 KQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMVESLKVRQQQEKARLPKIQRSEGKTRM 590

Query: 374 LEKQQHIE------QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              ++ +          ++     F +++EK      +++Q K+       HI+   + +
Sbjct: 591 AMYKKSLHINASGSASEQREKIKQFSQQEEKRQKAERVQQQQKHEAQMRDMHIQ-CESNL 649

Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453
             +   + + CH  V   T+ L++  
Sbjct: 650 NELQQLQNEKCHLLVEHETQKLKALD 675


>gi|77459439|ref|YP_348946.1| exonuclease SbcC [Pseudomonas fluorescens Pf0-1]
 gi|77383442|gb|ABA74955.1| exonuclease [Pseudomonas fluorescens Pf0-1]
          Length = 1213

 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 7/152 (4%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L +     +Q+++    R   L    +    +    +     H             
Sbjct: 699 RAAWLTRQNEQLNQSITQDEQRQTALLTLQQDAARLTQQLRQAETAHQQASQHLSNQQRE 758

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           +  +RQ + E+      ++      +   + E  +    L  Q   R+  +    ++L  
Sbjct: 759 LSADRQRLDEELAAFATLLPS--DTLEALRAEPASTFMQLDRQIAERLAQVDQQKEELAE 816

Query: 426 RIEFIL-----SHKIKSCHTSVSITTRILQSF 452
           + +          + +     +    + L + 
Sbjct: 817 QQQRQQTLEKEQDRQQGRVQQLQNAEQQLNAL 848


>gi|323965346|gb|EGB60804.1| exonuclease SbcC [Escherichia coli M863]
 gi|327254712|gb|EGE66328.1| exonuclease sbcC [Escherichia coli STEC_7v]
          Length = 1047

 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/153 (9%), Positives = 39/153 (25%), Gaps = 12/153 (7%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366
             L   D+    +  R   L + L    +                ++  +         +
Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHTAAL 306

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421
              RQ I E    +++ +           K+   +           Q  +R    +  + 
Sbjct: 307 AHTRQQIEEVNTRLQRTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366

Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
               +     S +  ++     ++   + L S 
Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNSL 399


>gi|198422063|ref|XP_002122097.1| PREDICTED: similar to zinc finger protein 291 [Ciona intestinalis]
          Length = 1439

 Score = 37.4 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 59/192 (30%), Gaps = 15/192 (7%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
                 +          + + S   +L  R   ++      K+            + Q L
Sbjct: 576 QMHHEKSQKIHELSGKVQEVVSWKNDLIRRQRVLLQSSHIEKLQRAEE-----QRAMQLL 630

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
           S  R       +  E      +  + +    ++   + +  +  ++  R  + + +   E
Sbjct: 631 SKVRKAQAEDTKVNEIAFINELQEQNKRHEVLMRIGEHEERLQELEDERNKMNQVKSAKE 690

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           + VK+  R +   +++++  L + R++   RI       +K   ++        +     
Sbjct: 691 ENVKERRRALEKVRQDRMEELKVRRKEQDARIEQQRIDKEKEREKMAK------EKARER 744

Query: 442 VSITTRILQSFA 453
                + L +  
Sbjct: 745 ----QQRLSALN 752


>gi|326933430|ref|XP_003212807.1| PREDICTED: dixin-like [Meleagris gallopavo]
          Length = 689

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/186 (9%), Positives = 47/186 (25%), Gaps = 14/186 (7%)

Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN--------- 338
           LE      ++    +    +    K +      L       D      E           
Sbjct: 282 LENSWEEQLLEQQDHLEKEMEEAKKMISGLQALLLNGSLPEDEQEGSFELCEHGACPEEQ 341

Query: 339 ---LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
              +   + +       +   +          +  +  L+++   +      L+   L  
Sbjct: 342 LIIIRSRLDQSEEENQDLKKELLKYKQEARNLQGIKDALQQRLAQQDASVLQLKQELLRA 401

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
                 LH      + ++   +  + +    +       ++   T +    R L   +Y+
Sbjct: 402 NMDREELHNQNVDLQRKVEERNRLLAEYKKELGQK-DRHLQQHQTKLDEMLRQLSEASYQ 460

Query: 456 NT-LKR 460
              L+R
Sbjct: 461 QVDLER 466


>gi|47211881|emb|CAF91177.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2193

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 70/239 (29%), Gaps = 16/239 (6%)

Query: 225 WHFNDEMIVRAIANS---SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
             F+ E+ +R +  S       I   G+   +T  ++    R   P              
Sbjct: 656 MSFDRELCIRQLRYSGMMETIRIRRAGYPIRYTFVEFVERYRVLMPGIKPAHIQEDLRGT 715

Query: 282 QSSLINLEARLNNIII-----------RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
              ++      ++                 + +I    ++   +    +++   R RL+ 
Sbjct: 716 CQQIVLARLGKHDDWQIGKTKIFLKDHHDTQLEIERDEAITDKVILIQKSIRGHRQRLNF 775

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390
           L            +R +R   +          +  I ++R+  +  Q    ++     R 
Sbjct: 776 LRLRTSATTIQRFWRGHRCRRNYRTMKTGFLRLQAIFRSRKFFISYQATRLRVTLIQARC 835

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                ++       LR     + +      ++L  R+      + ++    ++   R+L
Sbjct: 836 RGFLVRQMFWR--HLRAVLTLQAYTRGMIARRLCHRLRAERHQRQEAERQRLAEEERLL 892


>gi|312946138|gb|ADR26965.1| putative tail length tape measure protein from putative prophage
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 1021

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|251788032|ref|YP_003002753.1| hypothetical protein Dd1591_0384 [Dickeya zeae Ech1591]
 gi|247536653|gb|ACT05274.1| MscS Mechanosensitive ion channel [Dickeya zeae Ech1591]
          Length = 1107

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 52/194 (26%), Gaps = 17/194 (8%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
                    + L   L     TL+  R R      E    L     +       ++   +
Sbjct: 210 QADVYKKRRDRLDNQLQLLRSTLNTLRQREAEQALERTEQLAEQEGQLPAAVAGLLQTNR 269

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL---HMLREQTKNRIFY 415
              +  N Q  R   +  +Q         +R      +E+   L     L E  + ++  
Sbjct: 270 DLSMALNQQAQRMDQIAARQRQTAAQTLQVRQALSTLREQAQWLGSSPALGETLRAQVAR 329

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-YKNTLKRGYTSIQDTNNNFIT 474
           L    K    +++  +  ++++           L + +             +  N   +T
Sbjct: 330 LPEMPKP--QQLDGDM-AQLRAQRLHYEDQLNKLPANSEP----------ARQDNGAPLT 376

Query: 475 QKRNLATKTRILIN 488
             +      ++   
Sbjct: 377 SAQQKIVNDQLRTQ 390


>gi|260807192|ref|XP_002598393.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
 gi|229283665|gb|EEN54405.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae]
          Length = 1869

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/124 (7%), Positives = 41/124 (33%), Gaps = 1/124 (0%)

Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388
             + +E +   + ++ R       +  ++  +      ++ ++   E+++ + +   +  
Sbjct: 866 QAIKKEHQRAQDELVARHKDEREELEAKMDQEMRKKEAEERKKFEAEREKALREKKNKQA 925

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS-HKIKSCHTSVSITTR 447
             +   K      +  L    +  +  L+  +    +R +  L    +      +    R
Sbjct: 926 AELAARKDLTEEEMAALLAAHEQELEDLNDRLDAERSRQQLSLRDKLLARKRNRLQNKQR 985

Query: 448 ILQS 451
             ++
Sbjct: 986 KQEA 989


>gi|195554943|ref|XP_002076996.1| GD24521 [Drosophila simulans]
 gi|194203014|gb|EDX16590.1| GD24521 [Drosophila simulans]
          Length = 675

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 8/153 (5%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
                 ++  ++ L    + L   R +      +    L+  + +       +   I + 
Sbjct: 481 NPNQKDISERVQCLELLGKLLQQHRQQN----IDRRQMLDKQVAKVKSDSIELDTEIATL 536

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE----KIAILHMLREQTKNRIFYL 416
                 QK R   +E     ++ +    R   LE +     ++  L    +Q   ++   
Sbjct: 537 DTQLRAQKQRLTKMEASYRTKRDMHAQHRQQLLEDQYDQTARLGELEKQEKQAMEKLEAN 596

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               + L+T  E      +K+    +    + L
Sbjct: 597 KQRNEDLLTAAEQFQEQDLKARKDRLEKCEQKL 629


>gi|82542720|ref|YP_406667.1| hypothetical protein SBO_0106 [Shigella boydii Sb227]
 gi|81244131|gb|ABB64839.1| putative membrane protein [Shigella boydii Sb227]
          Length = 607

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 420 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQ 479

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370
           Q    +R R+     E    +   +    +  +  +    RI+S             + R
Sbjct: 480 QRREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQR 539

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429
               +++ +  Q V+          +E++      R    NR   L+   +     R+  
Sbjct: 540 PLNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSE 599

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 600 RGARRLER 607


>gi|84998962|ref|XP_954202.1| hypothetical protein [Theileria annulata]
 gi|65305200|emb|CAI73525.1| hypothetical protein TA20215 [Theileria annulata]
          Length = 1207

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 53/169 (31%), Gaps = 7/169 (4%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + RL+         ++    +  +      + L   R   +RL +E          R  +
Sbjct: 424 QERLDIEEKIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRK 483

Query: 349 HFNHIINRIKSDFLIHNIQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
               +     +      ++K R      + + E++   E++ ++    I  + +    + 
Sbjct: 484 LEERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQ 543

Query: 403 HMLREQTKNRIFYLHTHIKKLIT-RIEFILSHKIKSCHTSVSITTRILQ 450
             L  +   R+       ++L   R+E     + +     +      L+
Sbjct: 544 KRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLEERLE 592


>gi|71418478|ref|XP_810864.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70875461|gb|EAN89013.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 911

 Score = 37.4 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/170 (10%), Positives = 50/170 (29%), Gaps = 6/170 (3%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
                +  ++ ++ K     L    + L N+    +       +L +E            
Sbjct: 454 QCAQNIKALVQQIRKNAEEKLQLQQRILINTRSKNTGESQLGQKLSQENYTKEREENNTN 513

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
            + F HI +    D       + R  +   +++  +  K     +    + ++       
Sbjct: 514 TKTFTHIKHFYTQDSPRTPPVQRRLDLSGNKKNSLKDYKIKGFDVLATLERQLQERDDAL 573

Query: 407 EQTKNRIFYLHTHIKKLITRIEFI------LSHKIKSCHTSVSITTRILQ 450
              ++R+         L +R          L  +++    +++     L+
Sbjct: 574 AALRDRLEEYGREKSALESRSSESVDVVVTLERQLQERDDALAALRDRLE 623


>gi|195472753|ref|XP_002088664.1| GE11355 [Drosophila yakuba]
 gi|194174765|gb|EDW88376.1| GE11355 [Drosophila yakuba]
          Length = 3968

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 45/182 (24%), Gaps = 8/182 (4%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                   + +  +         ++ +          L +    LS          +   L
Sbjct: 2718 WRQYLQHVQSFLSCSIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2777

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRI-KSDFLIHNIQKNRQHILEKQQ-HIEQIVKQHLR 389
                   L  I+ R       +         L   +   RQ   E+    +  I  + + 
Sbjct: 2778 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERHALQLRYIHLKRVP 2837

Query: 390  YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
            ++       I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 2838 HLKHRLDAMIQQLEQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2897

Query: 450  QS 451
            ++
Sbjct: 2898 KT 2899


>gi|169610525|ref|XP_001798681.1| hypothetical protein SNOG_08363 [Phaeosphaeria nodorum SN15]
 gi|111063519|gb|EAT84639.1| hypothetical protein SNOG_08363 [Phaeosphaeria nodorum SN15]
          Length = 402

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/188 (9%), Positives = 38/188 (20%), Gaps = 40/188 (21%)

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ--HLRYIFLEKKEKIAILHMLREQTKN 411
                  +    +   R    + Q H  Q ++     R       +  A     +     
Sbjct: 151 QAWWCCTWPHAFLDVERGRDDDVQAHPHQHLRAPCQCRPCRPLLTQTGARGPQRQVSPGA 210

Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAYKNTLKRGYTSIQDTN 469
            +    + +  + +R                +        +S +    L RG+    +  
Sbjct: 211 LMPRRQSPVASIRSRARCATRAT----RRQFTTVACPARQKSLS--AALARGFAKTSNPC 264

Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ---- 525
                    L                          ++P            +  +Q    
Sbjct: 265 GR----ASQLRA------------------ESKEAPDRPPPSSLRPGRSAIEPASQHSSA 302

Query: 526 ----GELF 529
               G LF
Sbjct: 303 PTIDGRLF 310


>gi|48256959|gb|AAT41662.1| Ccd1BalphaL [Mus musculus]
          Length = 474

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338
               LEA     ++   ++    +    K +      L       D   R +        
Sbjct: 61  RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 120

Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                  +   + +       +   +          +  +     QQ + Q     L+  
Sbjct: 121 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 178

Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               +  +    +  +    + ++   +  + +    +        +     +    R L
Sbjct: 179 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 237

Query: 450 QSFAYKNT-LKR 460
              +Y+   L+R
Sbjct: 238 SDASYQQVDLER 249


>gi|323172052|gb|EFZ57692.1| phage tail tape measure protein, lambda family [Escherichia coli
           LT-68]
          Length = 761

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 276 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 335

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 336 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 395

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 396 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 429


>gi|209526267|ref|ZP_03274797.1| chromosome segregation protein SMC [Arthrospira maxima CS-328]
 gi|209493364|gb|EDZ93689.1| chromosome segregation protein SMC [Arthrospira maxima CS-328]
          Length = 1199

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 2/202 (0%)

Query: 285  LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
             +              + ++  + +    L    Q L  ++          +  LE    
Sbjct: 913  QVEQRLGTAKQERDRAEAQLREMQTAQSQLEWQIQKLEETQQGRREQLNIKQQQLETQKA 972

Query: 345  RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKKEKIAIL 402
                    I  ++    L   I+   + + + +    +     +H      E  +K+A L
Sbjct: 973  ELPDPLPTIPEKLDLATLQREIKSLTKRMEDLEPVNMLALEEYEHTTTRLEELSQKLATL 1032

Query: 403  HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462
            H  R +   RI    T  ++        ++   ++    +S     LQ    ++    G 
Sbjct: 1033 HGERTELLLRIENFTTLRRRAFQEAFDAVNQNFQTIFAELSEGDGYLQIDDPEDPFNSGL 1092

Query: 463  TSIQDTNNNFITQKRNLATKTR 484
              +       + +  +++   +
Sbjct: 1093 NLVAHPKGKPVQRLTSMSGGEK 1114


>gi|166831566|gb|ABY90102.1| CDC42 binding protein kinase gamma (predicted) [Callithrix jacchus]
          Length = 1551

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/201 (8%), Positives = 58/201 (28%), Gaps = 9/201 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D+   T      +  P         +        +    ++       ++ + L   +Q 
Sbjct: 366 DVDDDTLNHPGTLPPPSHGAFSGHHLPFVGFTYTLGSHSLESSSEAWAAMERKLCCLEQE 425

Query: 321 LSCSRYRLDRLPRELEHN--LEIIIFRKYRHFNHIINRIKSDFLIHNIQK----NRQHIL 374
                 R    P     +  LE +          +   ++    +  +      +     
Sbjct: 426 KVELSRRHQEAPHAPADHRELEQLRKEVQTLRERLSEMLRDKAPLSQMDGPPAGSPGQAS 485

Query: 375 EKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           + QQ ++++ ++    R     +++++      +E+   R+           ++    LS
Sbjct: 486 DLQQELDRLHQELAEGRAGLQAQEQELCRAQGRQEELLQRLQEAQEREAATASQ-SQALS 544

Query: 433 HKIKSCHTSVSITTRILQSFA 453
            +++    +       + S +
Sbjct: 545 SQLEEAQAAQRELEAQVSSLS 565


>gi|33152115|ref|NP_873468.1| aminopeptidase N protein [Haemophilus ducreyi 35000HP]
 gi|33148337|gb|AAP95857.1| aminopeptidase N protein [Haemophilus ducreyi 35000HP]
          Length = 869

 Score = 37.4 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 55/195 (28%), Gaps = 7/195 (3%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT----LNSLLKA 313
           Y  D      +  A+ A+        +   +   L     +      +T      +    
Sbjct: 664 YRCDKYQVVASDMAKRALRNVCLTYLAFTEVGNHLTYKHYQQSDNMTDTLAALSAATQAQ 723

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI--KSDFLIHNIQKNRQ 371
           L   DQ L+    +  +    ++    +   R   +   ++  +     F ++N  + R 
Sbjct: 724 LTCRDQLLADFEQKWQQDGLVMDKWFMLQATRPDANVLQLVQSLLMHPSFNLNNPNRVRS 783

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
            I        Q         +    + +  L+    Q  +R+      + +   + + ++
Sbjct: 784 LIGAFANQNPQAFHAVDGSGYRFLVDILLKLNQHNPQLASRLIEPLIKLSRYDNQRQTLM 843

Query: 432 SHKIKSCHTSVSITT 446
              +K     +    
Sbjct: 844 KRGLKRL-MELDNLA 857


>gi|320195890|gb|EFW70515.1| Phage tail length tape-measure protein 1 [Escherichia coli
           WV_060327]
          Length = 1021

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|312278519|gb|ADQ63176.1| DNA polymeraDNA polymerase III alphase III alpha subunit
           [Streptococcus thermophilus ND03]
          Length = 1036

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 10  LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69
              P   +SEL+ + K  V   L  V +       R       A+ S+ D  +++D  ++
Sbjct: 874 ASRPYQPISELTLNSKATVLVQLESVRI------IRTKKGDQMAFLSVFDGVNKLDVTLF 927

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
             T    +    EG  F + G+        + Q+I+ ++  +
Sbjct: 928 PETYFYHKDKLREGSLFYLEGRTQ--ERDGRLQLILSNIEEA 967


>gi|251790688|ref|YP_003005409.1| SMC domain-containing protein [Dickeya zeae Ech1591]
 gi|247539309|gb|ACT07930.1| SMC domain protein [Dickeya zeae Ech1591]
          Length = 1227

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 7/146 (4%)

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379
                R +     R  E         +++H    I   ++ F      +   H+++++  
Sbjct: 393 LARLQRQQEQTRLRLEEIENYRRQHSRHQHLGSHIPLWQAQFPQQLKWQQDLHVVQEKAA 452

Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-----RIEFILSHK 434
            +QI  ++L        EK     +  E+ + R+       ++L        +   L+ +
Sbjct: 453 QQQIQAEYLDQQRTSLVEKQQAQQLACERARQRLNEHLQQDEQLEAEYPLANLRQQLARR 512

Query: 435 IKSC--HTSVSITTRILQSFAYKNTL 458
                    ++ +  +LQ    + TL
Sbjct: 513 AAERPDRQQLATSAAVLQQLISQRTL 538


>gi|239817568|ref|YP_002946478.1| histidine kinase [Variovorax paradoxus S110]
 gi|239804145|gb|ACS21212.1| histidine kinase [Variovorax paradoxus S110]
          Length = 696

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR---- 370
             +++     R R+  +  E E  LE  + R+          +  +       + R    
Sbjct: 402 RRAERDYRAERERVLAVRLEAEQALEGTVVRRTAELQQTNAALHEEIAARARLEARLRES 461

Query: 371 ----QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
               +  + +Q+    +V    R            L + +   +  +      I++ + R
Sbjct: 462 LEVERQAIVQQREFVSMVSHEFRTPLTVIDGAAQSLDISKLGGEPVVKQRTERIRRAVQR 521

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
           +  ++ + + +           L+       L RG
Sbjct: 522 LTMLIENILLADRLQPENRMLRLEVVD-MAALARG 555


>gi|115709861|ref|XP_781919.2| PREDICTED: similar to Coiled coil domain-containing protein 46
           [Strongylocentrotus purpuratus]
 gi|115973047|ref|XP_001192708.1| PREDICTED: similar to Coiled coil domain-containing protein 46
           [Strongylocentrotus purpuratus]
          Length = 950

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/225 (8%), Positives = 62/225 (27%), Gaps = 18/225 (8%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
               + +      L      ++      K   +   L      ++        +      
Sbjct: 699 TKDAKVIFDLEQQLRDVKEEMLQSDSLRKQQLVELGLLREEERNKVQREHETEVRISHLG 758

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               L   + +     +   +      +    ++ +    +    ++Q  K    +    
Sbjct: 759 EVRQLRSEMDQYRTTLHKENSTQMEQAMTQTNERLKDIERDYSNRLDQANKTIKEHQETV 818

Query: 395 KKEKI------AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            + +       + + +   +T +++      ++K        +  ++      +    R 
Sbjct: 819 HQLREENQIAKSNMELQLTETVSKLEDEKELLRKQHGAYNKAVQRELDDQRQRIKQLDRR 878

Query: 449 L--QSFAYKNTLK-------RGY--TSIQDT-NNNFITQKRNLAT 481
           L  +   ++  L+       RG    SI+D  +   ++ K  + T
Sbjct: 879 LQEEELNHQEKLQHDFEQRNRGLLPASIKDELDGTILSLKSQVNT 923


>gi|74002548|ref|XP_535715.2| PREDICTED: similar to downregulated in ovarian cancer 1 isoform 2
           [Canis familiaris]
          Length = 1130

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 4/181 (2%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                +   L+  E      I+ L + K      + K+       L     RL RL  + 
Sbjct: 149 ESHRRILEQLLMAEKSHRQTILELEEEKRKHKEYMEKSDEFIS-LLEQECERLKRLIDQE 207

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
             + E     K +    +   +        +  + Q  L  Q  +++   Q L     E 
Sbjct: 208 TKSQEKKEQEKEKRVTALKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQDLTTSAKET 267

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452
             K+A+     ++ + +   L   ++   T+       +  K+ +  +      + L + 
Sbjct: 268 HAKLALAETRVQEEEQKATRLEKELQTQTTKFHQNQETIMAKLTNEDSQNRQLRQKLAAL 327

Query: 453 A 453
           +
Sbjct: 328 S 328


>gi|78184004|ref|YP_376439.1| chromosome segregation protein SMC [Synechococcus sp. CC9902]
 gi|78168298|gb|ABB25395.1| condensin subunit Smc [Synechococcus sp. CC9902]
          Length = 1204

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/167 (10%), Positives = 53/167 (31%), Gaps = 3/167 (1%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346
             +   +    +      + L +       S+  +  SR RL  +       L+    R 
Sbjct: 353 RRQEWQHQSKTQEKDPHQDALAAAEDTCRASESAVEVSRRRLADVAGRSGAWLDEQKRRS 412

Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406
            R      +          +Q+  +   E+ Q +  + +Q       + ++++  L    
Sbjct: 413 ARRQELQSSVNPKLEEQQQLQERLRQESERLQELH-LEQQQDGADEQDVQQQLTTLEESW 471

Query: 407 EQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451
           +   + +      +++ +  +  +     +++   T +      L+S
Sbjct: 472 QTLIHGLSEGKQALQQTVDSLAIQQRTRSRLEQEQTRLEREIARLES 518


>gi|149199492|ref|ZP_01876527.1| Peptidase S1C, Do [Lentisphaera araneosa HTCC2155]
 gi|149137427|gb|EDM25845.1| Peptidase S1C, Do [Lentisphaera araneosa HTCC2155]
          Length = 461

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 3/65 (4%)

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKR 519
           G+      +   +T    +     I ++  DG +  A VI K P  +    K    +   
Sbjct: 101 GFII--SEDGYVLTNNHVIGEADHIKVSLADGRELEAKVIGKDPKSDVAVVKVDAKDLPT 158

Query: 520 EKQGT 524
              G 
Sbjct: 159 LALGD 163


>gi|119490443|ref|ZP_01622904.1| hypothetical protein L8106_27324 [Lyngbya sp. PCC 8106]
 gi|119453914|gb|EAW35069.1| hypothetical protein L8106_27324 [Lyngbya sp. PCC 8106]
          Length = 314

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 17/174 (9%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
            ++        N       +    T+      + +    ++  R RL+RL  E E  L+ 
Sbjct: 1   MTNWAKQTWERNQKAELRWEQAQTTIADQKNQIDDRQDEINLLRKRLERLTLEKEQTLKN 60

Query: 342 IIFRKYRHFNHIINRIKS--DFLIHNIQKNRQHILEKQQHI---EQIVKQHLRYIFLEKK 396
            I +     N + N I      L    + +RQ + E Q  +   +  +++  +      +
Sbjct: 61  AIEQHRERVNQLENTINQLQQGLKTAEKTSRQLLEELQNQLNERQAKIEELQQQSKQLIR 120

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           EK     + ++  + R+  L + + +L  R+              +      L+
Sbjct: 121 EKEQAEKLNQQLEQQRLPELQSELNQLKDRLTT------------LETANEKLE 162


>gi|115293378|gb|ABI93618.1| SMC protein [Terfezia boudieri]
          Length = 557

 Score = 37.4 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 13/182 (7%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
             L +              +        +  ++ +  ++ RL  + +  L   I +    
Sbjct: 1   QWLKDDATVNYHNAQMAEQTAQHNFYTVNSQITQNDEKIARLQAQHQEAL-TKINQAQDE 59

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409
              I   +           +     ++ Q   Q+  Q  R       ++   L  L++  
Sbjct: 60  LLQINQSLDVITPKAEAMTHEITHAKQAQSEVQLTWQSHRDELSSLMQEKNNLENLKKLA 119

Query: 410 KNRIFYLHTHIKKLITRIEFIL------------SHKIKSCHTSVSITTRILQSFAYKNT 457
           +++       + K   R + ++             +++ +    V    + L+      T
Sbjct: 120 QSQRQRSEIGLNKWQVRYDELIAAKNLFSDTIEVQNQLSADTLKVVALRQKLEHLNDDET 179

Query: 458 LK 459
           LK
Sbjct: 180 LK 181


>gi|331671633|ref|ZP_08372431.1| putative membrane protein [Escherichia coli TA280]
 gi|331071478|gb|EGI42835.1| putative membrane protein [Escherichia coli TA280]
          Length = 617

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/188 (9%), Positives = 49/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 430 AAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 489

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372
           Q    +R R+     E    +   +    +  +       RI+S          +K +Q 
Sbjct: 490 QRREAARERIQSASPEQRQAVREKMQTNPQNQQRKEAARERIQSASPEQRQVFKEKVQQR 549

Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            L +QQ     ++I           +++           + + +   +     +  R+  
Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQFFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 610 RGARRLER 617


>gi|301611702|ref|XP_002935361.1| PREDICTED: early endosome antigen 1 [Xenopus (Silurana) tropicalis]
          Length = 1402

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 47/160 (29%), Gaps = 6/160 (3%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            + +K +++ + +  + L    + L   R   ++L  + +  +  +  +       +   
Sbjct: 369 NQKLKAELSEVETKYQHLKAEFKQLQQQREEKEQLSLQQQSEINQLHSKLLETERQLGEA 428

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                    +   +    E+Q    Q+          EK      L    E+ + +    
Sbjct: 429 HGRLKEQRQLSAEKLMDKEQQVADLQLKLSRAEEQLKEKTSASTDLQHQLEKIRQQHQEQ 488

Query: 417 HTHIKKLITRIEFILS------HKIKSCHTSVSITTRILQ 450
               +   +++    +       +I      +     +L+
Sbjct: 489 TNLQQNTTSKLREAQNDLEQVLRQIGDKDQKIQNLEALLE 528


>gi|327268807|ref|XP_003219187.1| PREDICTED: pleckstrin homology-like domain family B member 2-like
           [Anolis carolinensis]
          Length = 1267

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 56/172 (32%), Gaps = 3/172 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           Q  L    A L   +I     +   L++  + L    +  S  + +LD  P  +   L+ 
Sbjct: 662 QDHLNRKIAELERNVIGEKTKEKIKLDAEREKLEKLQELYSEQKTQLDNCPESMREQLQQ 721

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            + R            +   L     +N   + E ++++ Q + + +         +   
Sbjct: 722 QLNRDADLLEIESKHFE--DLEFQQLENESRLDEDKENLTQQLLREVAEYQRNIVSRKEK 779

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
           +  L++Q  + +          +   +  L   ++    ++    +   S +
Sbjct: 780 ISALKKQANHIVQQAQREQDHFVKE-KNNLLMMLQREKENLCNLEKKYSSLS 830


>gi|255520144|ref|ZP_05387381.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes FSL
           J1-175]
          Length = 329

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 185 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 242

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 243 ELQLIINKAE 252


>gi|195018544|ref|XP_001984802.1| GH16670 [Drosophila grimshawi]
 gi|193898284|gb|EDV97150.1| GH16670 [Drosophila grimshawi]
          Length = 2884

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 13/198 (6%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
             ++   D +  TP+   +     K      L  L+ +    +  L + K      L   L
Sbjct: 2045 FSNLTEDSKFKTPSLLMQTPELPKAITSPELKQLKEK----LSALEEEKQQQKTELELNL 2100

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                Q L+  + +LDR  +     L        R +   I+ +++  L    Q+      
Sbjct: 2101 NQLQQQLAHEKEQLDRQQK-----LIRGHEESERKYRQRIDLLENRILETAAQEAADRET 2155

Query: 375  EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH- 433
             +++    +V         + +E  A      E     I     H ++L  R++  +   
Sbjct: 2156 LRKE--LNLVSAAHAQCEQQHQEMAATRKQELETLNAEIKTKTEHNRELTGRLQLAMERT 2213

Query: 434  -KIKSCHTSVSITTRILQ 450
             +++     +      L+
Sbjct: 2214 DQLQRQVQDLERDLERLK 2231



 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/139 (7%), Positives = 46/139 (33%), Gaps = 2/139 (1%)

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L     +LD+  R  E  ++ I   + +        ++      ++Q        +   +
Sbjct: 1715 LQRVSEKLDKHTRVEEAAIKRIRDLEMQVTQMRSGCVELQHERDSLQGRIDEQSHRISSL 1774

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            ++ +++  +      +   + L+    + ++ +  L   +     ++   +  +++    
Sbjct: 1775 QKRLEEQRQRAEQLHRVGTSDLNTRVHELQSELRNLGEQLSARDKQMAT-MQQQLQRSKD 1833

Query: 441  SVSITTRILQSFA-YKNTL 458
             +      L + +     L
Sbjct: 1834 EIVRLETELAARSQPDRNL 1852


>gi|62363235|gb|AAX81909.1| beta-amyloid precursor protein 751 [Canis lupus familiaris]
          Length = 751

 Score = 37.4 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S +P  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVMPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                +     R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|195020897|ref|XP_001985289.1| GH14589 [Drosophila grimshawi]
 gi|193898771|gb|EDV97637.1| GH14589 [Drosophila grimshawi]
          Length = 1081

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/202 (9%), Positives = 53/202 (26%), Gaps = 14/202 (6%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           +AD    L  P+ +    +         +  +++          + +            +
Sbjct: 380 MADGCCYLPVPSTSSNMSL-SRDVSTSNTYQVHISNTSEQGDYYVHERDRERARWANYNM 438

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLE-----IIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
               Q       +   L R +    +       +     +       + +  L   + K 
Sbjct: 439 QQQQQQQQQQLLQPGWLNRGMHDLKDSEDDVQSMQSSSTYLRGQNAPLDAHTLAERMDKR 498

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           R     K       +K+ L    L +K ++       +    RI   +        R+++
Sbjct: 499 R-----KASEYHNAIKKQLHERELIRKWELERQRQEEQLEDQRIRRENL---MEQERLDY 550

Query: 430 ILSHKIKSCHTSVSITTRILQS 451
                ++    +      +L +
Sbjct: 551 ERRQLLEREEAARKKQQALLDA 572


>gi|307175147|gb|EFN65249.1| Nesprin-2 [Camponotus floridanus]
          Length = 8493

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 52/187 (27%), Gaps = 14/187 (7%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330
             E   + + +  +         +    N      K LP     +   R   +        
Sbjct: 7266 WEEYLTHVQDFLSTGVPSDYNGLSEHRNLCEIHRKLLPEQQNLMLTVRQEEEHDRSVAEQ 7325

Query: 331  ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
               L       L  I+ R     + I    K       +    + + +++Q +  +   H
Sbjct: 7326 FNALTSLHNETLARILERHGAVRDRISAWDKYRLDQSKLLTWLKEVEKERQRMH-LQFIH 7384

Query: 388  LRYIFLEKKEKIAILHMLRE---QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
            LR +    +   A+L  +     Q ++        +      +   +  +  +    ++ 
Sbjct: 7385 LRRLDKILQRIQALLDKVPTGETQIESLQKQQEYLLTNCEEALAVSIRMEHAANAQRIAN 7444

Query: 445  TTRILQS 451
                L++
Sbjct: 7445 LRAGLET 7451


>gi|302023511|ref|ZP_07248722.1| DNA polymerase III DnaE [Streptococcus suis 05HAS68]
          Length = 1036

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +  + D    +D  ++  +  +   + EEG    + G++       + Q+++E L P   
Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969

Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137
                 LE R+       +     
Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993


>gi|297701818|ref|XP_002827895.1| PREDICTED: fas-binding factor 1-like [Pongo abelii]
          Length = 1155

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 54/188 (28%), Gaps = 20/188 (10%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
              +E LQ     L AR  +      + +        + L    Q       RL  L R 
Sbjct: 662 QQREERLQRENEELSARYLSHCQEAEQARAELTAQHQRRLAAMAQEKDQEMERLRELQRA 721

Query: 335 LEHNLEIIIFRKYRHFNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQ 382
              ++      + +    +             +    + +IH ++K    + E    +E 
Sbjct: 722 SILDMRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSIIHQMEKFSSSLHELSSRVEA 781

Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
                 +   L  +++   L  L+E+   +   +                  I      +
Sbjct: 782 SHLTTSQERELGIRQRDEQLRALQERLGQQQRDMEEE--------RSRQQEVIGKMEARL 833

Query: 443 SITTRILQ 450
           +  +R+L+
Sbjct: 834 NEQSRLLE 841


>gi|297462058|ref|XP_887804.4| PREDICTED: myosin, heavy chain 14 isoform 4 [Bos taurus]
 gi|297485855|ref|XP_002695172.1| PREDICTED: myosin, heavy polypeptide 14-like [Bos taurus]
 gi|296477596|gb|DAA19711.1| myosin, heavy polypeptide 14-like [Bos taurus]
          Length = 2006

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/244 (7%), Positives = 58/244 (23%), Gaps = 27/244 (11%)

Query: 271  AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
                    + L   +    +    I  +  + +        + L   ++  +  R R   
Sbjct: 1672 LRKMQAQMKELWREVEETRSSREEIFAQNRESEKRLKGLEAEVLRLQEELAASDRARRQA 1731

Query: 331  LPRELEHNLEIII-----FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
                 E   E+                +  R+         +++   +L  +     +  
Sbjct: 1732 QQERDEMADEVANGSLSKAAILDEKRQLEGRLGQMEEELEEEQSNAELLNDRYRKLLLQV 1791

Query: 386  QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
            + L      ++   A     R+Q + ++  L   + +            I +  + ++  
Sbjct: 1792 ESLTTELSAERSFSAKAESGRQQLERQVQELRERLGEEDAGARARQKMIIAALESKLAQA 1851

Query: 446  TRILQSFAYKNTLKRGYTSIQDTNNNFITQKR--------NL----ATKTRILINFFDGQ 493
               L+  + +  L              + +           +        ++      G 
Sbjct: 1852 EEQLEQESRERILS----------GKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEKGN 1901

Query: 494  ANAI 497
                
Sbjct: 1902 LRVK 1905


>gi|289547877|ref|YP_003472865.1| secretion protein HlyD [Thermocrinis albus DSM 14484]
 gi|289181494|gb|ADC88738.1| secretion protein HlyD family protein [Thermocrinis albus DSM
           14484]
          Length = 374

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 10/262 (3%)

Query: 232 IVRAIANSSIPIISAIGHETDWTLADYA---ADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
           +   I    +  I  I H  ++ ++D     AD  A            V        +  
Sbjct: 10  VSLLIVAFVLYGILWIKHRREYAISDAVFVKADRMANVGFQVDGKVTRVY-VNLGDHVRK 68

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
              L  +     + K++TL + +KAL +  + L     RL              I  +  
Sbjct: 69  GDILAELDPSDYQLKVDTLEAQIKALESQRRQLEIQYKRLTEQLSLQLKA--SRITEEEV 126

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
                    + + L   ++K  +     +    + +    RY  ++ + K+ +      +
Sbjct: 127 MAKERALLHQMEELDAQLKKVSKDRERYEDLTRKGLFPLQRYEEIDTQYKVLLEKRRALE 186

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG---YTSI 465
                  L     + IT +      +++     +      +++   +  L +    YT +
Sbjct: 187 KNLEELRLSYQKSQSITHLHRADLMRLEELRQQIQSLENQIEALKKQKELAQNQLQYTYL 246

Query: 466 QDTNNNFITQKRNLATKTRILI 487
           +   +  I + R ++    I  
Sbjct: 247 RAPFDGVIAK-RFVSPGDVIRA 267


>gi|218698537|ref|YP_002406166.1| hypothetical protein ECIAI39_0117 [Escherichia coli IAI39]
 gi|218368523|emb|CAR16258.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 617

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P   
Sbjct: 430 AAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 489

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372
           Q    +R R+     E    +   +    +  +       RI+S          +K +Q 
Sbjct: 490 QRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 549

Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            L +QQ     ++I         + +++           + + +   +     +  R+  
Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 610 RGARRLER 617


>gi|195174684|ref|XP_002028102.1| GL21321 [Drosophila persimilis]
 gi|194115842|gb|EDW37885.1| GL21321 [Drosophila persimilis]
          Length = 252

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI--KKL 423
           + + R  +   +  +E +     R      +E++  L    E  + R+  L   +    L
Sbjct: 46  LDRLRDFLEPLRDFLEPL---RDRECLDPLRERLEPLRERLEPLRERLEPLRERLEPDPL 102

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452
             R++  L  +++     +      L+  
Sbjct: 103 RERLDP-LRERLEPLRERLEPLRERLEPL 130



 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 6/123 (4%)

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
           RL   ++  L               +    D L   ++  R  +   +          LR
Sbjct: 17  RLEVPIDPALPDRERSWEPFLFLFGDSTLLDRLRDFLEPLRDFLEPLRDR---ECLDPLR 73

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                 +E++  L    E  + R+    L   +  L  R+E  L  +++     +     
Sbjct: 74  ERLEPLRERLEPLRERLEPLRERLEPDPLRERLDPLRERLEP-LRERLEPLRERLEPLRD 132

Query: 448 ILQ 450
            L+
Sbjct: 133 RLE 135


>gi|118365373|ref|XP_001015907.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89297674|gb|EAR95662.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1285

 Score = 37.4 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 3/169 (1%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
             L  R+  +       K        +              ++  L +  E  L+    R
Sbjct: 575 EELRQRVKQLEEENAILKSKLDGDNKEWSTRYKDLEDMMNRKISELTKYYEDLLKAAERR 634

Query: 346 KYRHFNHIIN--RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
           +    + +      +   L   +    Q I+E++  + + +    ++   + ++     +
Sbjct: 635 RINDLDELERLRVKQLKDLEDKLNSEMQRIIEEKDRLFKEMNDKFQHHIQQLEQNWQSKY 694

Query: 404 MLREQTKNR-IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
              EQ KN+ I  L    +K I  ++     ++           R L++
Sbjct: 695 KEMEQLKNKKIQELEDQHRKTIDSMKKEHQRQLDELRNYYEEQIRKLKA 743


>gi|122920502|pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms
           Resolution
 gi|122920505|pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil
           Domain At 3.0 Angstrom Resolution
 gi|118133213|gb|ABK60307.1| moesin [Spodoptera frugiperda]
          Length = 575

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/124 (8%), Positives = 38/124 (30%), Gaps = 5/124 (4%)

Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386
           R+  L                     +  + + + L    Q+ +  +    +   +  +Q
Sbjct: 279 RILALCMGNHELYMRRRKPDTIDVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQ 338

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
             +    + +E++        + ++ I  L   +++L          +++     +    
Sbjct: 339 EYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQL-----QAAKEELEQRQNELQAMM 393

Query: 447 RILQ 450
           + L+
Sbjct: 394 QRLE 397


>gi|117920015|ref|YP_869207.1| chromosome segregation protein SMC [Shewanella sp. ANA-3]
 gi|117612347|gb|ABK47801.1| chromosome segregation protein SMC [Shewanella sp. ANA-3]
          Length = 1142

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 91/319 (28%), Gaps = 15/319 (4%)

Query: 147 IIAVITSPTGAVIRDILQRISC----RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKE 202
            +A +T        +  Q        R    ++   +  Q +   K      +Q+    E
Sbjct: 465 TLAAVTHTLDVARGEFEQLSQRLTSMRARFELVEQWLAKQEELSDKPQLWQSIQVENGWE 524

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT----LADY 258
                    ++    G +  ++  + D  +   +     PI+ A  +   W      AD 
Sbjct: 525 AAAELALQGLMTLPVGVNANEIGFYADAALSADVHLDGSPILDAKLNLAPWLKGLKWADN 584

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL-----NSLLKA 313
            A  +A  P+ AA+  +   +        L A+ +N    +   K  T          +A
Sbjct: 585 LASAQAQLPSLAADERIVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIAECEQA 644

Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
                  L     +L ++   L    + +   +            ++      +  R  +
Sbjct: 645 KAIQQAKLDELAQQLTQVRDSLSQGTKRLHQLQLDKATKSTQLNNAEAQAKQREAKRGQL 704

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            E     +  + +    + L  +++  +   L    + +          +       L  
Sbjct: 705 AETVARTQAELAELAEQLMLLAEQEDELAEALEVSLEQQQQQSQDAQGDMAR--HQALKA 762

Query: 434 KIKSCHTSVSITTRILQSF 452
           +I      ++     LQS 
Sbjct: 763 QIGDAERRLASLNASLQSV 781


>gi|325499907|gb|EGC97766.1| tail length tape measure protein from prophage [Escherichia
           fergusonii ECD227]
          Length = 1021

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|312967375|ref|ZP_07781590.1| phage tail tape measure protein, lambda family [Escherichia coli
           2362-75]
 gi|312287572|gb|EFR15477.1| phage tail tape measure protein, lambda family [Escherichia coli
           2362-75]
          Length = 1018

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|307183173|gb|EFN70082.1| Nucleoprotein TPR [Camponotus floridanus]
          Length = 2354

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/181 (7%), Positives = 50/181 (27%), Gaps = 2/181 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           E  +  +           +     +   +         L   + +    +     +    
Sbjct: 691 EKMLSEEVERLRKEAEANSARCCRLRAQLDSANERFTLLQGNVASYKSQIKALEEKCTNY 750

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389
              +  + + ++  K           +++  + N+++ RQ + + +  +  E+ V Q  R
Sbjct: 751 NITIGKHEQSLMILKDETLAAQTRLARAEVQLENLRQERQLLKDSEGRLLKEREVYQRER 810

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              +  +  +  +    E+ +               R    L  +++            L
Sbjct: 811 QTQVLLRADMESIKASLERVQAEGHLRAEQRFDDANRECAALRRRLQEEQDRFRELAGHL 870

Query: 450 Q 450
           +
Sbjct: 871 E 871


>gi|294493225|gb|ADE91981.1| prophage tail length tape measure protein, putative [Escherichia
           coli IHE3034]
          Length = 1021

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATDRMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|218705037|ref|YP_002412556.1| putative tail length tape measure protein [Escherichia coli UMN026]
 gi|218432134|emb|CAR13022.1| putative tail length tape measure protein from putative prophage
           [Escherichia coli UMN026]
          Length = 1031

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I +   +D  + +    R++    ++ +    K+       E  
Sbjct: 572 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 630

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689

Query: 457 TLKR 460
            L R
Sbjct: 690 VLAR 693


>gi|167537971|ref|XP_001750652.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770858|gb|EDQ84536.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2016

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/198 (8%), Positives = 53/198 (26%), Gaps = 16/198 (8%)

Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313
           TL ++  D  A        +   ++                +  + +      L    + 
Sbjct: 190 TLLEHGVDAEAKDEREPPTLTQCIRVGTLRQRAQCSDVSAPLSAKSLPEAWEQLCQAHER 249

Query: 314 LPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           L +  Q      + +R +      +  L  ++         + + I              
Sbjct: 250 LSSPKQNGLEQLADWRAEHDYEHQDWYLAFVLHETQALLQQLQDMIDWQA---------- 299

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
               K   +  + K++   I     +++  +H    + + +I      +  +   +   +
Sbjct: 300 ----KTLSVVTLCKEYASSITQSSADQVVSIHEEVAELQKKIQATTAFLAFVSDDMRAGI 355

Query: 432 SHKIKSCHTSVSITTRIL 449
              +      +S   + L
Sbjct: 356 QANLDEEKERLSTLQQQL 373


>gi|148609395|ref|YP_001272526.1| putative tail protein [Phage cdtI]
 gi|148524724|dbj|BAF63346.1| putative tail protein [Phage cdtI]
          Length = 1018

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|149716493|ref|XP_001501846.1| PREDICTED: DIX domain containing 1 [Equus caballus]
          Length = 683

 Score = 37.4 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++   ++    +    K +      L       D   R L           
Sbjct: 275 YLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               ++  + +       +   +          +  +     QQ + Q     L+     
Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392

Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
            +  +    +  +    + ++   +  + +    +       ++     +    R L   
Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSEA 451

Query: 453 AYKNT-LKR 460
           +Y+   L+R
Sbjct: 452 SYQQVDLER 460


>gi|325116020|emb|CBZ51574.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 1179

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 24/84 (28%), Gaps = 4/84 (4%)

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +  + + +    +   R         +  L   REQ +         +  L  R+     
Sbjct: 811 LAARHEELLARDEALNRLRTWWLDYAVQQLEHEREQAEKARERHEAQLGSLRARLSS--- 867

Query: 433 HKIKSCHTSVSITTRILQSFAYKN 456
             ++     +S    ++ S +   
Sbjct: 868 -LLRRKGLHLSDVVALVSSLSPLA 890


>gi|323186587|gb|EFZ71925.1| phage tail tape measure protein, lambda family [Escherichia coli
           1357]
          Length = 724

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 238 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 297

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 298 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 357

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 358 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 391


>gi|315294645|gb|EFU53992.1| conserved hypothetical protein [Escherichia coli MS 153-1]
          Length = 593

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 415 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 474

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 475 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 534

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 535 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 593


>gi|307212505|gb|EFN88236.1| Nucleoprotein TPR [Harpegnathos saltator]
          Length = 2322

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/181 (9%), Positives = 51/181 (28%), Gaps = 2/181 (1%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           E  +  +           +     +   +         L   + +    +     + +  
Sbjct: 701 EKMLSEEVERLRKEAEANSTRCCRLKAQLDSANERFTLLQGNVSSYKTQIKVLEEKCNNY 760

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389
              +  + + I+  K        N  +++  + N++  RQ + + +  +  E+ V Q  R
Sbjct: 761 NITIGKHEQSIMILKDETLAAQSNLSRAEVQLENLRHERQLLRDSEGRLLKEREVYQRER 820

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
                 K  +  +    E+ +               R    L  +++         T  L
Sbjct: 821 QTQALLKADMESIKASLERVQAEGQLRAEQRFDDANRECAALRRRLQEEQDRFRDLTAHL 880

Query: 450 Q 450
           +
Sbjct: 881 E 881


>gi|301762064|ref|XP_002916477.1| PREDICTED: myosin-7B-like [Ailuropoda melanoleuca]
          Length = 1892

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 1/137 (0%)

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
            L  +  R     +              R    +   +    L       +    +    +
Sbjct: 1544 LRRNHQRAVESLQASLDAETRARNEALRLKKKMEGDLNDLELQLGHAARQSMEAQAATRL 1603

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
             Q   +  +    E++   A L    +  + R   L T +++L   +E     + +    
Sbjct: 1604 LQAQLKEEQAGRDEEQRLAAELREQAQALERRAALLATELEELRAALEQGERSR-RLAEQ 1662

Query: 441  SVSITTRILQSFAYKNT 457
             +   T  L     +NT
Sbjct: 1663 ELLEATERLNLLHSQNT 1679


>gi|260551249|ref|ZP_05825451.1| ABC transporter [Acinetobacter sp. RUH2624]
 gi|260405706|gb|EEW99196.1| ABC transporter [Acinetobacter sp. RUH2624]
          Length = 527

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 61/200 (30%), Gaps = 10/200 (5%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            DL  P    +      +         +    L+     L +     L   LK  P    
Sbjct: 136 TDLNFPVKQLSEGQKTKLALAALFLKTDHYLLLDEPSNHLDQDARQWLIHHLKKHPAGAL 195

Query: 320 TLSC---SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
            +S        +D +    EH L+         +     R++   L  ++ ++++ +   
Sbjct: 196 IISHDLTLLNEVDHIYHLNEHGLQHTTGNYEIFYEQYQTRVE--ALEQSVHQHQREVKHM 253

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +Q    ++ +  +      K + +       Q K  + +      + +  I+     +I+
Sbjct: 254 KQKQHDVLMKAQKRERAGNKLRDSNS-----QAKILLDFKKEQAGQSLGAIQSQHHRQIE 308

Query: 437 SCHTSVSITTRILQSFAYKN 456
                +     +L++   + 
Sbjct: 309 QSQQDLKNKKSLLETVKPQQ 328


>gi|218551664|ref|YP_002385456.1| tail length tape measure protein from prophage [Escherichia
           fergusonii ATCC 35469]
 gi|218359206|emb|CAQ91871.1| putative tail length tape measure protein from putative prophage
           [Escherichia fergusonii ATCC 35469]
          Length = 1031

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 630

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689

Query: 457 TLKR 460
            L R
Sbjct: 690 VLAR 693


>gi|194379634|dbj|BAG63783.1| unnamed protein product [Homo sapiens]
          Length = 1642

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1274 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1333

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1334 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1393

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1394 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1453

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1454 NMEKLTEERDQRIAA 1468


>gi|194043280|ref|XP_001924987.1| PREDICTED: protein SFI1 homolog [Sus scrofa]
          Length = 1238

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 26/284 (9%), Positives = 68/284 (23%), Gaps = 13/284 (4%)

Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232
               +   +Q   C  + A    Q     + R       + L R     +       E +
Sbjct: 313 ERFHYVTVLQAHFCDWQWAWERRQSLYAHQARVKGLARRMALRRAFTHWKHYVLLCAEAV 372

Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292
           +                     L  +         T A    +      Q   + L  R 
Sbjct: 373 IWRKGAEE---------HRRRCLLHFCFRALKDNVTRAHLQRMRRNLAHQQHHVMLLRRF 423

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY----RLDRLPRELEHNLEIIIFRKYR 348
            N+    I+ +    +            ++  R      L    +     L       + 
Sbjct: 424 WNVWQSRIEQREEREHLPSLCAAWDHYRVTLLRQCFKSWLQYTRKRRSQQLLQARADSHF 483

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
               +    ++   +   ++  Q +  +     + + +   +    +K      + L E+
Sbjct: 484 QQRALPAAFQAWRRLWQWRQQEQVLSARAMCFHREMLEKQVFAVWCQKMSQRRDYRLAER 543

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
                       +   T  +   +  ++    +V+     L+  
Sbjct: 544 MAILHAERQLLRRHWSTWCQQAAACCLEQLWQAVARAHHRLERL 587


>gi|145481655|ref|XP_001426850.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393927|emb|CAK59452.1| unnamed protein product [Paramecium tetraurelia]
          Length = 416

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/161 (7%), Positives = 52/161 (32%), Gaps = 1/161 (0%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                 +  +     ++ + K++ + + +    +    +   R +  ++    E  L   
Sbjct: 211 QQSFEHQEGIKYRSHQIFQNKLSKVQNKMNYFQDKINQIEKKRLQQLQMNYLQEQELNQK 270

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
                    +I      + L   ++K +     + Q+  ++ ++  R     +  +  + 
Sbjct: 271 RNDVRAKSENIYRNKSLNILNKYLEKEKSFQQVQSQNQIELQQKLQRLNEKWQTHQNQVQ 330

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443
               +  ++    L   + +   R++  + +K+      + 
Sbjct: 331 KAD-QLKQSYFSSLEQKMTQRDQRLQDQIQNKLDVQKRRLK 370


>gi|26246057|ref|NP_752096.1| hypothetical protein c0146 [Escherichia coli CFT073]
 gi|227884972|ref|ZP_04002777.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|300993776|ref|ZP_07180542.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301049980|ref|ZP_07196897.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|26106454|gb|AAN78640.1|AE016755_140 Hypothetical protein yacH [Escherichia coli CFT073]
 gi|227838110|gb|EEJ48576.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|300298282|gb|EFJ54667.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300406480|gb|EFJ90018.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307551968|gb|ADN44743.1| putative membrane protein [Escherichia coli ABU 83972]
          Length = 593

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 415 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 474

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 475 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 534

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 535 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 593


>gi|89094702|ref|ZP_01167638.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92]
 gi|89081048|gb|EAR60284.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92]
          Length = 1067

 Score = 37.4 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 2/138 (1%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
            + Q L     +L +  R L  ++E     +      +     S  LI    +     + 
Sbjct: 256 QAIQLLRKENQQLSQQLRALLVDIESYDQERRAEQIRLSQLTTSFNLIRQQLELEVSHIT 315

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
             Q I+ I +        +  ++IA L + R Q + R+       +     +  +   ++
Sbjct: 316 PAQ-IQFIFENRTAQDTRKVSQEIAQLRLQRAQLEQRLNVSGDK-QATQEAMPSLNKAQL 373

Query: 436 KSCHTSVSITTRILQSFA 453
           +     +    ++L   +
Sbjct: 374 RRFQNLLDDQKQLLNQLS 391


>gi|301782741|ref|XP_002926787.1| PREDICTED: nuclear factor erythroid 2-related factor 2-like
           [Ailuropoda melanoleuca]
          Length = 606

 Score = 37.0 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 26/312 (8%)

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI------PIISAIGHETDWTLA 256
                  D+ +      +  +   FND     ++  S         + S++  +T    +
Sbjct: 315 NGPIDVSDLSLCKAFNQNHPETTEFNDSDSGISLNTSPCMASPEHSVESSVYGDTPLGFS 374

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D        +  G+ +   P  + +QS+    ++   +             N+  K LP 
Sbjct: 375 DSEM-EEIDSAPGSVKQNGPKTQPVQSAGDTAQSPSPSPGHSAPARDAQCENTPKKELP- 432

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
               +S    +      +    LE  + R       + +       I N+  +  + +  
Sbjct: 433 ----VSPGHRKTPFTKDKHSSRLEAHLTRDELRAKAL-HIPFPVEKIINLPVDDFNEMMS 487

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++   +     +R I    K K+A  +  + + +N I  L   +  L    E +L  K +
Sbjct: 488 KEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLEN-IVELEQDLDHLKDEKEKLLKEKGE 546

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
           +  + + +  + L +  Y       ++ ++D +          + +        DG    
Sbjct: 547 NDKS-LHLLKKQLSTL-YLEV----FSMLRDEDGKP-YSPSEYSLQQT-----RDGNVFL 594

Query: 497 IVINKAPPKEQP 508
           +  +K P  ++ 
Sbjct: 595 VPKSKKPDTKKN 606


>gi|118091189|ref|XP_427678.2| PREDICTED: similar to Peripheral-type benzodiazepine
           receptor-associated protein 1 (PRAX-1) (RIM-binding
           protein 1) (RIM-BP1), partial [Gallus gallus]
          Length = 652

 Score = 37.0 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 91/329 (27%), Gaps = 22/329 (6%)

Query: 93  TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVIT 152
           T F G    QI +  L  +          + +    ++    +Q               T
Sbjct: 57  TAFGGRGSLQIRVAMLREAAKREQQLLANQLRCAWEKQQAQEEQRLKEREQW----QRAT 112

Query: 153 SPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212
                +     +  + +  L+        Q  E  + +A  +   +           D++
Sbjct: 113 ETRQLLRWKEAELHATKELLQRECDAALRQARELQQLLAQELRSPHRSIWEARAKLQDVL 172

Query: 213 ILARGGGSIEDLWH--------------FNDEMIVRAIANSSIPIISAIGHETDWTLADY 258
              R     E                  FN  ++        + + S    +    + + 
Sbjct: 173 SKLRWETDGEQPACIRHLQHQLELERRLFNQYIVGSWEGEPKL-VDSHAAKDAHVQVPET 231

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           A +         +    P +          E    + + RL +       + ++ L  + 
Sbjct: 232 AKEDLGLPGRRPSTNRGPGQLLADRLRSKWERERASKLQRLREQSQRQRETEIRQLLQAK 291

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
           +  +  R   +RL ++    +      + +    ++    S      +Q+  Q  L  + 
Sbjct: 292 E--AQLRQMQERLQKQRNDTVRQAWHLQRQLVEELLRG-DSSSGERRVQQEVQRQLCWKP 348

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLRE 407
             EQ          L+++ +  + ++L+ 
Sbjct: 349 RGEQAAHVLRLQRELQEQRRGFLQYILQH 377


>gi|194429902|ref|ZP_03062413.1| gifsy-1 prophage VmtH [Escherichia coli B171]
 gi|194412058|gb|EDX28369.1| gifsy-1 prophage VmtH [Escherichia coli B171]
          Length = 1018

 Score = 37.0 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATDRMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|223932493|ref|ZP_03624494.1| DNA polymerase III, alpha subunit [Streptococcus suis 89/1591]
 gi|330833069|ref|YP_004401894.1| DNA polymerase III subunit alpha [Streptococcus suis ST3]
 gi|223898764|gb|EEF65124.1| DNA polymerase III, alpha subunit [Streptococcus suis 89/1591]
 gi|329307292|gb|AEB81708.1| DNA polymerase III alpha subunit [Streptococcus suis ST3]
          Length = 1036

 Score = 37.0 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +  + D    +D  ++  +  +   + EEG    + G++       + Q+++E L P   
Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969

Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137
                 LE R+       +     
Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993


>gi|218439930|ref|YP_002378259.1| pseudouridine synthase [Cyanothece sp. PCC 7424]
 gi|218172658|gb|ACK71391.1| pseudouridine synthase [Cyanothece sp. PCC 7424]
          Length = 548

 Score = 37.0 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 43/135 (31%), Gaps = 13/135 (9%)

Query: 319 QTLSCSRYRLDRLPR-ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
             L   +  +  L      +  + +     +  + +    + +    + ++ R  +  K 
Sbjct: 117 NLLEEIKQNILSLQTLTDRYIYQNLSEEFAQKLDQLTTTHQHNKQQRHQKRERLKLTFKG 176

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           + + Q +++  +   LEK E+  + H   E     +  +                 KI+ 
Sbjct: 177 EILTQALEELNQQSRLEKIERRQLKHQRDETLNPLLEKI------------SSADEKIRH 224

Query: 438 CHTSVSITTRILQSF 452
                 I +R LQ  
Sbjct: 225 LKQRRKILSRQLQHL 239


>gi|332811527|ref|XP_003308718.1| PREDICTED: kinesin-like protein KIF21B-like [Pan troglodytes]
          Length = 1365

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 16/214 (7%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
            +L  P+P G  E+         +  I ++ +L + +    +      +   + L     
Sbjct: 359 GNLHPPSPRGCLEVNFQADLADLTCEIEIKQKLIDELENSQRRLQTLKHQYEEKLILLQN 418

Query: 320 TLSCSRYRLDR-------LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            +  ++   DR       +    E     I     +    +   ++    +   QK    
Sbjct: 419 KIRDTQLERDRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQK---LQAAQKEHAR 475

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI------FYLHTHIKKLITR 426
           +L+ Q   E+ +K+    +   KK K+A++  +RE+ + R             +KK   R
Sbjct: 476 LLKNQSRYERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKEQRR 535

Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            EF +            +  R  Q  +    L +
Sbjct: 536 QEFQIRALESQKRQQEMVLRRKTQEVSALRRLAK 569


>gi|308477764|ref|XP_003101095.1| CRE-TWK-2 protein [Caenorhabditis remanei]
 gi|308264226|gb|EFP08179.1| CRE-TWK-2 protein [Caenorhabditis remanei]
          Length = 1528

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/228 (8%), Positives = 60/228 (26%), Gaps = 9/228 (3%)

Query: 220  SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
            S +D    +    +          I+ +        A +  D        + +M     +
Sbjct: 1305 SNDDEHPLDGPHTILHAVQCPKKFIATVAPTEVADTACFVCDSNL----VSMQMIEEDAD 1360

Query: 280  HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
            H+                    +   T       L  + +       ++ R+     + +
Sbjct: 1361 HIHWKQTMSTTHYYATDNWKDDFYRVTPLMCRGVLRGAYKVGKDRSGKIQRVDIIRVYRV 1420

Query: 340  EIIIFRKYRH--FNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV--KQHLRYIFLE 394
                        F+ +I+ +++      +  K +Q +      +   +  + + R+    
Sbjct: 1421 TRHFSCWKTVPIFHRVISLVEAALPYKQMTSKQKQLLKANGNKLINRLFIQYYWRFQQSF 1480

Query: 395  KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
               +  +        + R       + K + R+    S    +   ++
Sbjct: 1481 VNREQVLNEYAESSKRTRAKKSWIRVVKNVARLRAATSILAAARKNTL 1528


>gi|301762084|ref|XP_002916453.1| PREDICTED: centrosome-associated protein CEP250-like [Ailuropoda
            melanoleuca]
 gi|281346056|gb|EFB21640.1| hypothetical protein PANDA_004532 [Ailuropoda melanoleuca]
          Length = 2442

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 58/204 (28%), Gaps = 4/204 (1%)

Query: 261  DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
            D          E     KE L   L   +  +     R+   +            +  Q 
Sbjct: 1627 DQELKCQREQIEELQRQKERLAQDLERRDQDMLLQRERIRVLEDQRTLQTKILEEDLGQI 1686

Query: 321  LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                + R   L       ++                ++   LI   ++      +++   
Sbjct: 1687 KLSLKERGRELA-SQRPPMQERAEEGKSPSKAQRGSLEHLKLILRDKEKEVECQQERLQE 1745

Query: 381  EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE---FILSHKIKS 437
             +  K  L         K+    +L  Q +  +  L  H+++   R E     L   ++ 
Sbjct: 1746 LRGHKDQLEQQLQGLHRKVGETSLLLSQREQELVVLQRHLQEARERAELKERSLQGHLEE 1805

Query: 438  CHTSVSITTRILQSFAYKNTLKRG 461
               +++   + L++  ++    RG
Sbjct: 1806 AQRALAQRDQELEALRHEQQQARG 1829


>gi|220939485|emb|CAI35197.2| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
 gi|220941683|emb|CAI26157.2| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
          Length = 1185

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              E     I  R  +                       R+   R  ++     +     
Sbjct: 668 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 727

Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399
            ++     + R K+  L  I      RQ      Q + +      R     +K++     
Sbjct: 728 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 787

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
             L +     + +++           R +  L   +++    +     TR+L+
Sbjct: 788 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 840


>gi|218246876|ref|YP_002372247.1| hypothetical protein PCC8801_2059 [Cyanothece sp. PCC 8801]
 gi|257059918|ref|YP_003137806.1| protein with the myosin-like domain [Cyanothece sp. PCC 8802]
 gi|218167354|gb|ACK66091.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
 gi|256590084|gb|ACV00971.1| uncharacterized protein with the myosin-like domain [Cyanothece sp.
           PCC 8802]
          Length = 489

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 3/137 (2%)

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
           D+ L   R     L +      E+    K         + +   +  N +K +Q +    
Sbjct: 79  DEILKQLRIAQADLEQVGREKQEVSQELKTAKQQQNKAQQRLLSINQNFKKAQQQLGSVS 138

Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
              +++ +     +   +   ++   L     Q + +I      + K   +I    +  +
Sbjct: 139 NQAKKLRQDIETLLKERESLLQRKTELDGQISQLQAQIRDRDQELTKGQQKITD-QNRIL 197

Query: 436 KSCHTSVSITTRILQSF 452
           +   T +      L + 
Sbjct: 198 QQRQTRLQALENRLNAL 214


>gi|112961114|gb|ABI28176.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961117|gb|ABI28178.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961120|gb|ABI28180.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961123|gb|ABI28182.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961126|gb|ABI28184.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961129|gb|ABI28186.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961132|gb|ABI28188.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961135|gb|ABI28190.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961138|gb|ABI28192.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961141|gb|ABI28194.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961144|gb|ABI28196.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961147|gb|ABI28198.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961150|gb|ABI28200.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961153|gb|ABI28202.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961156|gb|ABI28204.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961159|gb|ABI28206.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961162|gb|ABI28208.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961165|gb|ABI28210.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961168|gb|ABI28212.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961171|gb|ABI28214.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961177|gb|ABI28218.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961183|gb|ABI28222.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961186|gb|ABI28224.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961189|gb|ABI28226.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961192|gb|ABI28228.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961195|gb|ABI28230.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961198|gb|ABI28232.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961201|gb|ABI28234.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961204|gb|ABI28236.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961207|gb|ABI28238.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961210|gb|ABI28240.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961213|gb|ABI28242.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961216|gb|ABI28244.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961219|gb|ABI28246.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961222|gb|ABI28248.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961225|gb|ABI28250.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961228|gb|ABI28252.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961231|gb|ABI28254.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961234|gb|ABI28256.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961237|gb|ABI28258.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961240|gb|ABI28260.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961243|gb|ABI28262.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961246|gb|ABI28264.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961249|gb|ABI28266.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961252|gb|ABI28268.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961255|gb|ABI28270.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961258|gb|ABI28272.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961261|gb|ABI28274.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961264|gb|ABI28276.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961267|gb|ABI28278.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961270|gb|ABI28280.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961273|gb|ABI28282.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961276|gb|ABI28284.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961279|gb|ABI28286.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961282|gb|ABI28288.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961285|gb|ABI28290.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961288|gb|ABI28292.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961291|gb|ABI28294.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961294|gb|ABI28296.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961297|gb|ABI28298.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
          Length = 454

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 310 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 367

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 368 ELQLIINKAE 377


>gi|160897767|ref|YP_001563349.1| mechanosensitive ion channel protein MscS [Delftia acidovorans
           SPH-1]
 gi|160363351|gb|ABX34964.1| MscS Mechanosensitive ion channel [Delftia acidovorans SPH-1]
          Length = 1127

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 9/98 (9%)

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +          ++R+ +LE     E+      R   L  + +     +L    +      
Sbjct: 180 LTQARQARRSAEHRRALLELALRQEEQSTIEARQRLLAAQLQAQRRELLERMPRA----- 234

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
                 L  RI      +++     + +  +   +   
Sbjct: 235 ----AWLTQRIAERSRQQLEQQVQEMELAAQHASAADP 268


>gi|120611309|ref|YP_970987.1| UvrD/REP helicase [Acidovorax citrulli AAC00-1]
 gi|120589773|gb|ABM33213.1| DNA helicase/exodeoxyribonuclease V, subunit A [Acidovorax citrulli
            AAC00-1]
          Length = 1168

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 3/51 (5%)

Query: 481  TKTRILINF--FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529
                +   F   DG+    V + A     P +              QG LF
Sbjct: 1118 PGEPVRAAFLTGDGRM-VEVDSSARGGPAPAQPLPSPTPAAGPSPVQGSLF 1167


>gi|157869642|ref|XP_001683372.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68126437|emb|CAJ04149.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 1394

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/205 (5%), Positives = 53/205 (25%), Gaps = 20/205 (9%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
              +     +  L   ++++  R+ +        L        + L     ++ R  ++ 
Sbjct: 512 QQWQSCARDIQQLRTDMSSVQPRVAEAVQQAKAELADVWDAKVRLLEERTQQMHRERQQQ 571

Query: 336 EHNLEIIIFRKYRHFNHIINR--IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                  + +        + R  +  +     +++    +   +  +   V+        
Sbjct: 572 TDTQLRQLQQTLAEQQEALQRARVVGESADERLRRTEAALASVEATLPPAVEGVRARCEA 631

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHT---------- 440
            +        +   + +  I      ++       R+    + ++               
Sbjct: 632 LQGLIQQTCVLPLTRVQQDIEEAQRKLQTAEEDRIRLNSSWAQQLAEARQYHEERARHTR 691

Query: 441 -----SVSITTRILQSFAYKNTLKR 460
                 ++    + +    + TL+R
Sbjct: 692 EVLEQRLTHHKELFEELRTQQTLQR 716


>gi|56238585|emb|CAI26156.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
 gi|56800519|emb|CAI35196.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
          Length = 1184

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              E     I  R  +                       R+   R  ++     +     
Sbjct: 667 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 726

Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399
            ++     + R K+  L  I      RQ      Q + +      R     +K++     
Sbjct: 727 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 786

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
             L +     + +++           R +  L   +++    +     TR+L+
Sbjct: 787 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 839


>gi|324008303|gb|EGB77522.1| hypothetical protein HMPREF9532_01996 [Escherichia coli MS 57-2]
          Length = 585

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 407 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 466

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585


>gi|312623360|ref|YP_004024973.1| hypothetical protein Calkro_2331 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203827|gb|ADQ47154.1| hypothetical protein Calkro_2331 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 191

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 4/57 (7%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           K+++  +    ++ + R+  +   + ++  R++  +  ++ +    +    + L + 
Sbjct: 26  KQRLDRVEERLDRVEERLDRVEERLDRVEERLDR-VEKRLDAVEQRLDAVEQRLDTL 81


>gi|271498764|ref|YP_003331789.1| hypothetical protein Dd586_0187 [Dickeya dadantii Ech586]
 gi|270342319|gb|ACZ75084.1| protein of unknown function DUF195 [Dickeya dadantii Ech586]
          Length = 514

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 46/146 (31%), Gaps = 1/146 (0%)

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
           +               Q L  +R +L    +  + + + +  +     +        +  
Sbjct: 27  QQQRQARHDTEFRLQQQALEQTRQQLSENQQARQQDQQRLDQQSQELRSLHAQLAAGEEK 86

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
           +  + + R+   +  Q + + +++       E +E    L   R   + +   L    ++
Sbjct: 87  LRQLAELREECAQLNQEL-RALREANGAQEAELREVTIRLEETRLAAEEKQRLLMNSEQR 145

Query: 423 LITRIEFILSHKIKSCHTSVSITTRI 448
           L T+ E + +   +     V    + 
Sbjct: 146 LSTQFENLANRIFEQTGHKVDQQNQQ 171


>gi|194217372|ref|XP_001504251.2| PREDICTED: myosin XVIIIA isoform 4 [Equus caballus]
          Length = 2002

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1634 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1693

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1694 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1753

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1754 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1813

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1814 NMEKLTEERDQRIAA 1828


>gi|71414581|ref|XP_809388.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70873761|gb|EAN87537.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 843

 Score = 37.0 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 51/196 (26%), Gaps = 11/196 (5%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           +    +       AE A+  +   Q          + + +R     +         +   
Sbjct: 456 FMIHAQGNIFPRIAEPALAARCLEQWRDSYHFRIADRMFMRRTFLHMKNCFRRRLEIFQL 515

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQ---- 371
           ++       R  +     +      +FR +  F        +    L   ++  R+    
Sbjct: 516 NEIAKAYARRALQQRCLKKWCKTCRLFRLFVQFTRTLGRRFLCQALLTWRLRWVRRTSGG 575

Query: 372 -----HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426
                 +  KQQ +      H +     K+    ++     +T + I+           R
Sbjct: 576 DRLRAFLEMKQQRLIVCTFMHWKRKTHLKQLHQQLVFCRLRRTYHMIWNRWVQRVIFHRR 635

Query: 427 IEFILSHKIKSCHTSV 442
           +E   +      H   
Sbjct: 636 LERDRAALAVFMHQRF 651


>gi|269124843|ref|YP_003298213.1| peptidase S1 and S6 chymotrypsin/Hap [Thermomonospora curvata DSM
           43183]
 gi|268309801|gb|ACY96175.1| peptidase S1 and S6 chymotrypsin/Hap [Thermomonospora curvata DSM
           43183]
          Length = 361

 Score = 37.0 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNN-KREK 521
            +   +   IT    +    RI + F DG+ A A V+      +    + Q  +  +  +
Sbjct: 172 VVLRADGTIITNAHVVFGAARIQVKFSDGRTATAEVVGADAEHDIAVIRAQGVSGLQPAR 231

Query: 522 QGTQGEL 528
            G  GEL
Sbjct: 232 IGDSGEL 238


>gi|242765533|ref|XP_002340993.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724189|gb|EED23606.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
          Length = 814

 Score = 37.0 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 3/115 (2%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
           NL   I +  + F  + ++ KS     N+   +  +  +   +E  +K+  R     +  
Sbjct: 133 NLTKEIAQMKQEFERLQHQNKSH---QNLIAEKSALERQLNSLEIQLKEERRAFERNRSI 189

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +    +   +Q   R+           +R+E  ++ +  +           L+  
Sbjct: 190 EDKKQNSEAQQQLKRLQAELQKETDERSRLEQEINERTTAWEQQKKSLEERLEKL 244


>gi|325928632|ref|ZP_08189814.1| hypothetical protein XPE_3900 [Xanthomonas perforans 91-118]
 gi|325541003|gb|EGD12563.1| hypothetical protein XPE_3900 [Xanthomonas perforans 91-118]
          Length = 339

 Score = 37.0 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267
               +++ARGGG   +    +   + RA+  + +P  +A+GH  D  L D  AD    TP
Sbjct: 187 GVKGLVIARGGGERLETIG-DSRNVTRALIETGLPFYAALGHANDVLLLDKHADDVFLTP 245

Query: 268 TGAAEMA--VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
           +                       +   + +I+L        + L +   +  + L  S+
Sbjct: 246 SDFGHRLRDCLDAAQEAEDARTEASDAEDKLIQLSTKLDRRESELDETRRHLGELLQQSK 305

Query: 326 YRLDRLPRELEHN 338
                L  EL   
Sbjct: 306 LDSQGLKAELRQW 318


>gi|112961174|gb|ABI28216.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
 gi|112961180|gb|ABI28220.1| DNA polymerase III alpha subunit [Listeria monocytogenes]
          Length = 454

 Score = 37.0 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 40  EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99
           E+   R        + ++ D+   + A+++  +  K     ++G    +  K  T   + 
Sbjct: 310 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 367

Query: 100 KYQIIIESLI 109
           + Q+II    
Sbjct: 368 ELQLIINKAE 377


>gi|52782183|dbj|BAD51938.1| amyloid beta A4 precursor protein [Macaca fascicularis]
          Length = 696

 Score = 37.0 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 56/212 (26%), Gaps = 6/212 (2%)

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273
           GG   +  +F+ E    A+  S IP  +A   +       T  D              E 
Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +            R    +      K   +    + + + +Q  +  R +L     
Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                      R          +       H     ++++  +Q+  +  +K       +
Sbjct: 440 ARVEATLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
           + K+   I   +    +     ++  +  L  
Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531


>gi|326668218|ref|XP_002667195.2| PREDICTED: centriolin-like [Danio rerio]
          Length = 2172

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/145 (9%), Positives = 43/145 (29%), Gaps = 3/145 (2%)

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             + +    +T +       + P   +                +   +K   L   I+  
Sbjct: 370 QKRNIKFPSETENTGTQGQQKHPPASDLTETDSPGDYMSRHAQLAAEMKLQQLHKEIEAR 429

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
            Q IL   + + Q+     +    E ++    L    ++    +  L   ++ +  +++ 
Sbjct: 430 EQQILTASEELRQLEDAVSQRRISEAEK--EQLRQELQRRIQNLGELRGEMEAVEKQLDR 487

Query: 430 ILSHKIKSCHTSVSITTRILQSFAY 454
           + + +       +     +L S   
Sbjct: 488 LNAER-NQAQDEMEQLQNLLHSLDP 511


>gi|324117960|gb|EGC11859.1| lambda family protein phage tail tape measure protein [Escherichia
           coli E1167]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|324112013|gb|EGC05991.1| lambda family protein phage tail tape measure protein [Escherichia
           fergusonii B253]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|253751378|ref|YP_003024519.1| DNA polymerase III alpha subunit [Streptococcus suis SC84]
 gi|253753279|ref|YP_003026419.1| DNA polymerase III alpha subunit [Streptococcus suis P1/7]
 gi|253755890|ref|YP_003029030.1| DNA polymerase III alpha subunit [Streptococcus suis BM407]
 gi|251815667|emb|CAZ51255.1| DNA polymerase III alpha subunit [Streptococcus suis SC84]
 gi|251818354|emb|CAZ56178.1| DNA polymerase III alpha subunit [Streptococcus suis BM407]
 gi|251819524|emb|CAR45104.1| DNA polymerase III alpha subunit [Streptococcus suis P1/7]
 gi|292557997|gb|ADE30998.1| DNA polymerase III alpha subunit [Streptococcus suis GZ1]
 gi|319757664|gb|ADV69606.1| DNA polymerase III alpha subunit [Streptococcus suis JS14]
          Length = 1036

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +  + D    +D  ++  +  +   + EEG    + G++       + Q+++E L P   
Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969

Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137
                 LE R+       +     
Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993


>gi|148241806|ref|YP_001226963.1| RNA-binding protein [Synechococcus sp. RCC307]
 gi|147850116|emb|CAK27610.1| Predicted RNA-binding protein [Synechococcus sp. RCC307]
          Length = 577

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/203 (9%), Positives = 59/203 (29%), Gaps = 9/203 (4%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D   P    ++     + +  Q  L  L+++          Y+     S  ++       
Sbjct: 216 DRHTPAADLSSAQWQQLFDSWQQWLSQLDSQALQFASSGSGYRCWGEPSPCQSNTPLALN 275

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           LS +RY    L +         + +  +       R      +   +   +H+L++Q  +
Sbjct: 276 LSLARYYGQGLRQAQCQQQRQRLEQHLQQLVQREQRELQRQELLLARSGDEHLLQRQADL 335

Query: 381 ---EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHK 434
                 V     +    +  +     ++R   +  +      + +   ++      +  +
Sbjct: 336 LLCRSDVSSSGHHQLELQDPESNQTLVVRLNPQQTLVSQAQKLYQRARKLRRSVAAIEPR 395

Query: 435 IKSCHTSVSITTR---ILQSFAY 454
           ++     + +       LQ    
Sbjct: 396 LRRHQQRLELLEASQVQLQLADP 418


>gi|145542406|ref|XP_001456890.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424704|emb|CAK89493.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1007

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 58/154 (37%), Gaps = 2/154 (1%)

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
            K    + + + L    Q L  SR        E   N +  +       + I   I+ ++
Sbjct: 467 QKTEKYDRIREKLNQIQQQLDVSRDTPSYQIAERNRNFQKELINIKIEIDSIEKEIELEY 526

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTH 419
           L + +Q+++ ++  K Q++ +  K  +    L+ ++               ++I  L   
Sbjct: 527 LANKLQRDKLNLQNKSQNLFRTYKGIVDTQILKLQQLSNSSTETNYNIYFNDKIEKLGRQ 586

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
            + L  R++ +L +       ++  + + L+ F 
Sbjct: 587 KQNLEERLQSLLQNFQNQQIETLLPSFQKLKLFN 620


>gi|29477189|gb|AAH50149.1| Apoa4 protein [Mus musculus]
          Length = 376

 Score = 37.0 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/200 (9%), Positives = 67/200 (33%), Gaps = 5/200 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQ 319
           D              P  + +Q+++      L+  ++ L     +  N  ++ L  +   
Sbjct: 144 DQINTQTQEMKLQLTPYIQRMQTTIKENMDNLHTSMMPLATNLKDKFNRNMEELKGHLTP 203

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ---HILEK 376
             +  +  +D+   +L  +L  +        NH +  +      +  +   +    I + 
Sbjct: 204 RANELKATIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVSAKIDQL 263

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           Q+++  +++     +    +     L  L  Q + ++      ++ +       L  +++
Sbjct: 264 QKNLAPLMEDVQSKVKGNTEGLQKSLEDLNRQLEQQVEEFRRTVEPMGEMFNKALVQQLE 323

Query: 437 SCHTSVSITTRILQS-FAYK 455
                +   +  ++S  ++ 
Sbjct: 324 QFRQQLGPNSGEVESHLSFL 343


>gi|323447652|gb|EGB03565.1| hypothetical protein AURANDRAFT_72707 [Aureococcus anophagefferens]
          Length = 1252

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/136 (6%), Positives = 31/136 (22%), Gaps = 4/136 (2%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
               L          L   R    R              ++           +   L   
Sbjct: 70  RAQDLRDRDGQRHHRLRQLRQEPHRRRHVPVDEFVRGRRQRVGVLRLRQPDRRGPLLQRR 129

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI----K 421
           +    Q    ++  + +      +     ++ ++ +        +  +     H+     
Sbjct: 130 LGLRAQLHALRRPALRRAHVDGAQLRRASRRLQVHLGPRDLHAPERALAPRRRHVFRFDH 189

Query: 422 KLITRIEFILSHKIKS 437
             + R++  L   ++ 
Sbjct: 190 AHLRRLQPALRGLLRR 205


>gi|194217370|ref|XP_001504245.2| PREDICTED: myosin XVIIIA isoform 1 [Equus caballus]
          Length = 2039

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1671 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1790

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1791 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1851 NMEKLTEERDQRIAA 1865


>gi|24643294|ref|NP_728267.1| Tao-1, isoform D [Drosophila melanogaster]
 gi|24643296|ref|NP_728268.1| Tao-1, isoform E [Drosophila melanogaster]
 gi|320542329|ref|NP_001188672.1| Tao-1, isoform F [Drosophila melanogaster]
 gi|7293601|gb|AAF48973.1| Tao-1, isoform E [Drosophila melanogaster]
 gi|22832584|gb|AAN09504.1| Tao-1, isoform D [Drosophila melanogaster]
 gi|139000842|dbj|BAF51959.1| serine/threonine protein kinase TAO1 alpha [Drosophila
           melanogaster]
 gi|257286273|gb|ACV53083.1| LD06119p [Drosophila melanogaster]
 gi|318069466|gb|ADV37754.1| Tao-1, isoform F [Drosophila melanogaster]
          Length = 1039

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 15/182 (8%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
           +  V      +    N E     + +     K     +L     N  Q  +    R+ + 
Sbjct: 658 DRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQA 717

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQH 387
            ++          RK     H           H  Q+ R  + +K+Q ++Q    ++K H
Sbjct: 718 QKQYIELEMRKFKRKRMIMQH----------EHEDQQLRDELGKKEQQLQQAHAMLLKHH 767

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-SCHTSVSITT 446
            +   LE +++ ++  +  EQ   +      + K  + RI+  L  K             
Sbjct: 768 EKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELVRKHAVELRQQPKSLK 827

Query: 447 RI 448
           + 
Sbjct: 828 QK 829


>gi|124358938|ref|NP_084483.2| protein SFI1 homolog [Mus musculus]
 gi|123788825|sp|Q3UZY0|SFI1_MOUSE RecName: Full=Protein SFI1 homolog
 gi|74225816|dbj|BAE21725.1| unnamed protein product [Mus musculus]
 gi|220939484|emb|CAX15525.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
 gi|220941682|emb|CAX15985.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
          Length = 1216

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              E     I  R  +                       R+   R  ++     +     
Sbjct: 699 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 758

Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399
            ++     + R K+  L  I      RQ      Q + +      R     +K++     
Sbjct: 759 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 818

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
             L +     + +++           R +  L   +++    +     TR+L+
Sbjct: 819 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 871


>gi|71664261|ref|XP_819113.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70884400|gb|EAN97262.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1437

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/216 (8%), Positives = 59/216 (27%), Gaps = 5/216 (2%)

Query: 242  PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
             + +AI         D  A +               +E  + S  +L       + R+ +
Sbjct: 1074 VMWTAIAGGIVDAYVDECAAVFKRLYHSTTIYLREREETFKKSSHHLNMSCEERVRRMTR 1133

Query: 302  YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                    L   L  +    + +  R          ++            H+  ++ +  
Sbjct: 1134 GMTEREQGLATQLATAQSK-AAAAQRFSDEAYTKLEDVTSRYNEVCARVEHLEEQLAAKK 1192

Query: 362  LIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
                 ++ +      +  +E+  ++        +   ++  L    +  + R+       
Sbjct: 1193 RELETERRQWQETVAKLQLERAARRQGEEGRQEQLLRQVEELRAELQNVQARLNSAREEE 1252

Query: 421  KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            + +  R        ++     +     +L++   +N
Sbjct: 1253 QGIR-RDADNTKELLQRDIHRLER--ELLEARNSQN 1285


>gi|186686826|ref|YP_001870019.1| hypothetical protein Npun_AF098 [Nostoc punctiforme PCC 73102]
 gi|186469178|gb|ACC84978.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
          Length = 1108

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 26/238 (10%), Positives = 70/238 (29%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
             E+I    + +    IS +    +    + A+D +         M    +  +   L +
Sbjct: 382 ETELIADLSSAADKSYISEVSGWINSIRNEIASDNKLQCTHQGVNMIGTERGKILRFLDD 441

Query: 288 L-----EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD---RLPRELEHNL 339
                 +    N +  L   +    + L K   N D+ +   R  ++          +  
Sbjct: 442 YLIPKVDEYRANHLRELSADERTHGDFLQKMYDNRDRIIQQGRQAIEAEFYKIMRDRNLG 501

Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399
                    +   +       F   + +  + + + +QQ  E  ++   ++  L    K 
Sbjct: 502 PKFADAFITNVRQLFANASEKFRRESEKVWQPNEINRQQQYEAALQDINQFKNLFGLTKQ 561

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRILQSF 452
           A +    E+    +      I +  +R   +     +   +      ++   + L+  
Sbjct: 562 AQMEKYCEEALTGLESSFIAIIQHKSRTLSLQVIERILEHLDRMEQRLARFNQKLRQL 619


>gi|312217783|emb|CBX97730.1| similar to DNA repair protein rad50 [Leptosphaeria maculans]
          Length = 1321

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 52/191 (27%), Gaps = 9/191 (4%)

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
           +     E     +   +  L+ +     K          + L  +   L+    R   L 
Sbjct: 378 IRGYDYEIADKQVTEFQQILSKMSKDQNKALDRVREETQRELRTAQDELNALNTRKSGLA 437

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
           +  E     I+    R  +   +  +      +    +    E +Q ++  +       +
Sbjct: 438 QRKESAQTQIVSNDRRILDLQRSMNQISADEGSEAILQDKKHEVEQQLQNALTMASSERY 497

Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT------ 446
            E++ + + +    E  K R+            R    + +K +                
Sbjct: 498 EERQLEASTMVRTLEDHKERLTAELGD-ATKQARESASIDNKREELQNQQHSLATMKKVH 556

Query: 447 --RILQSFAYK 455
             R+LQ    +
Sbjct: 557 NKRLLQLLDPE 567


>gi|30519518|emb|CAD90693.1| A26L protein [Cowpox virus]
          Length = 1279

 Score = 37.0 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 23/171 (13%)

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419
           L   + + R ++ E    ++  +    R +   ++         R   + ++RI  L   
Sbjct: 679 LERQLSECRGNVTEI-NRLQSRISDLERQLNDCRRNNETNAETEREMRRLRDRITNLERQ 737

Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477
           +       E    +  +++     +    R L         KR      + N    T   
Sbjct: 738 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------NGNG---TSSE 782

Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528
            +    R+     D + +  + +K   +     K +L   + +    Q  L
Sbjct: 783 EVN---RLKTRIRDLERSLEICSKDESELYSAYKTELGRAREQISNLQESL 830


>gi|320193200|gb|EFW67840.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7
           str. EC1212]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 45/184 (24%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D    +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAARDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|332849677|ref|XP_003315897.1| PREDICTED: dystrobrevin alpha isoform 4 [Pan troglodytes]
          Length = 452

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 187

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280


>gi|308049345|ref|YP_003912911.1| hypothetical protein Fbal_1633 [Ferrimonas balearica DSM 9799]
 gi|307631535|gb|ADN75837.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
          Length = 1230

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 55/178 (30%), Gaps = 3/178 (1%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
              Q  + +L+A+     +    +    L  + + L      L+  R + +    E E  
Sbjct: 700 SEYQGFVEDLKAQQMEARMDKEAFWQERLGGIDEQLTQLSGELANRRAQKNEELAECERW 759

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
            +  +  +    + I+   +    I       + + +K    +   K        + ++K
Sbjct: 760 YQAELKERGVDDSQILALKEQIHAIDQKIGRTESMRDKVADYQIWFKGPFSLEQPQLQDK 819

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQSFA 453
           +++      +    +  L    K L   +   +      +   +  +    ++L +  
Sbjct: 820 LSVAQREILELDQVLAKLQREHKTLNDELKTSQKAAEQALTHANEQLEQLKQLLAALN 877


>gi|294101698|ref|YP_003553556.1| protease Do [Aminobacterium colombiense DSM 12261]
 gi|293616678|gb|ADE56832.1| protease Do [Aminobacterium colombiense DSM 12261]
          Length = 464

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPP 504
           G+  + D N   +T    +    +I +   DG+   A V+   P 
Sbjct: 92  GF-IVTD-NGQILTNSHVVEGADKITVTLSDGRTFPAEVLGTDPT 134


>gi|281353819|gb|EFB29403.1| hypothetical protein PANDA_016477 [Ailuropoda melanoleuca]
          Length = 592

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 26/312 (8%)

Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI------PIISAIGHETDWTLA 256
                  D+ +      +  +   FND     ++  S         + S++  +T    +
Sbjct: 301 NGPIDVSDLSLCKAFNQNHPETTEFNDSDSGISLNTSPCMASPEHSVESSVYGDTPLGFS 360

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D        +  G+ +   P  + +QS+    ++   +             N+  K LP 
Sbjct: 361 DSEM-EEIDSAPGSVKQNGPKTQPVQSAGDTAQSPSPSPGHSAPARDAQCENTPKKELP- 418

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
               +S    +      +    LE  + R       + +       I N+  +  + +  
Sbjct: 419 ----VSPGHRKTPFTKDKHSSRLEAHLTRDELRAKAL-HIPFPVEKIINLPVDDFNEMMS 473

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           ++   +     +R I    K K+A  +  + + +N I  L   +  L    E +L  K +
Sbjct: 474 KEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLEN-IVELEQDLDHLKDEKEKLLKEKGE 532

Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496
           +  + + +  + L +  Y       ++ ++D +          + +        DG    
Sbjct: 533 NDKS-LHLLKKQLSTL-YLEV----FSMLRDEDGKP-YSPSEYSLQQT-----RDGNVFL 580

Query: 497 IVINKAPPKEQP 508
           +  +K P  ++ 
Sbjct: 581 VPKSKKPDTKKN 592


>gi|312147274|ref|NP_001185871.1| dystrobrevin alpha isoform 14 [Homo sapiens]
 gi|194380838|dbj|BAG58572.1| unnamed protein product [Homo sapiens]
          Length = 452

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 187

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280


>gi|167860102|ref|NP_001108102.1| fas-binding factor 1 homolog [Gallus gallus]
 gi|82081074|sp|Q5ZIB2|FBF1_CHICK RecName: Full=Fas-binding factor 1 homolog; Short=FBF-1
 gi|53136404|emb|CAG32531.1| hypothetical protein RCJMB04_28i8 [Gallus gallus]
          Length = 1132

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 7/165 (4%)

Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352
             ++ +    +    + + +           S   L+RL      +++ ++         
Sbjct: 652 AQLLSQSQDAERARADLVAQHKQRVATLEQQSAQELERLRELQRSSVQEMLKDHEEQLQR 711

Query: 353 II----NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
           +       I +     +  ++   ++E+ +     +      +          L M   Q
Sbjct: 712 LKRLKDQEIDAVTSATSHTRSLNGVIEQMERFSSDLHSLSHKVEATHHTTSQELAMGARQ 771

Query: 409 TKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQ 450
              ++  L   + +    +      L   I      +S  TR+L+
Sbjct: 772 RDEQLKVLQDRLSQQQRDMEEERSRLQEVIAKMEARLSEQTRLLE 816


>gi|33866708|ref|NP_898267.1| serine protease [Synechococcus sp. WH 8102]
 gi|33633486|emb|CAE08691.1| possible serine protease [Synechococcus sp. WH 8102]
          Length = 374

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINK 501
            I D     +T    +     + +   DG+   A VI K
Sbjct: 118 VIFDAEGLLLTNAHVVEGADTLQVELTDGRSVEAKVIGK 156


>gi|191169465|ref|ZP_03031200.1| gifsy-1 prophage VmtH [Escherichia coli B7A]
 gi|190900491|gb|EDV60305.1| gifsy-1 prophage VmtH [Escherichia coli B7A]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I +   +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|71663670|ref|XP_818825.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70884097|gb|EAN96974.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 918

 Score = 37.0 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 8/167 (4%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +      K   +  L   +  + Q     +    RL  EL+    I    K + F    
Sbjct: 291 QLQNEAHDKSKQITVLTSRMQWAQQQAETLKSECSRLVEELKRFQSIHSETKKQLFEAEH 350

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           ++         +++    +  K + +  + ++ LR     +         +R +  +RI 
Sbjct: 351 DKSLLQVRCARLEELEVTLRRKSEELIHMEQELLRTTGTLQSCNQETEEAVRRELSSRIA 410

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
            L         R       ++ +    ++   R L+       L RG
Sbjct: 411 DLQEMRDNAELR-RREKESQLLNAQHQLAELRRQLE-------LARG 449


>gi|332028436|gb|EGI68479.1| Liprin-alpha-2 [Acromyrmex echinatior]
          Length = 1146

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 6/161 (3%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R    +       +  L             L  L  +LE  L+    +       I    
Sbjct: 245 RENAAQKEDQEERIATLEKRYLNAQRESTSLHDLNEKLEQELQHKKAQLKLQEEKIAAIQ 304

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNRIFY 415
           +   L          + E ++ ++Q ++   +        +++I  L    E+    +  
Sbjct: 305 EKLELAEQKLAQYAKLPEMEEQLKQRMEALTQAQERHGSAEDRIQRLETQLEEKNAEVMR 364

Query: 416 LHTHIKK---LITRIEFILSHKIKSCHTSVS-ITTRILQSF 452
           ++  +K      TR+   +   +   +  +       + + 
Sbjct: 365 VNQRLKMNEEHNTRLSTTVDKLLSESNERLQVHLKERMHAL 405


>gi|315614584|gb|EFU95227.1| phage tail tape measure protein, lambda family [Escherichia coli
           3431]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|293405039|ref|ZP_06649031.1| phage tail length tape-measure protein 1 [Escherichia coli
           FVEC1412]
 gi|291427247|gb|EFF00274.1| phage tail length tape-measure protein 1 [Escherichia coli
           FVEC1412]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I +   +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|281339395|gb|EFB14979.1| hypothetical protein PANDA_005456 [Ailuropoda melanoleuca]
          Length = 667

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/136 (8%), Positives = 36/136 (26%), Gaps = 8/136 (5%)

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL-- 374
               L   +                   +                L H  Q+ ++     
Sbjct: 362 QVHRLVLQQQESLSPGPCFRGTPFQDQEKYRNLEKQREELADIHKLQHRFQQEQRRWHRS 421

Query: 375 -EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
            ++QQ  ++     L+    E + +  +L   R +   ++      +++L          
Sbjct: 422 CDQQQREQEAKASRLQERERECRSQEELLLRNRGELDQQLQEYQQSLERLRE-----GQR 476

Query: 434 KIKSCHTSVSITTRIL 449
            ++     + +   +L
Sbjct: 477 LVERERERMRVQQSLL 492


>gi|121705166|ref|XP_001270846.1| cohesin complex subunit  (Psm1), putative [Aspergillus clavatus
           NRRL 1]
 gi|119398992|gb|EAW09420.1| cohesin complex subunit (Psm1), putative [Aspergillus clavatus NRRL
           1]
          Length = 1260

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/171 (9%), Positives = 52/171 (30%), Gaps = 3/171 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
               +         + R +K K   L    + L +     +  +  L+ L + +  + E 
Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELEHAKRQLEDLRPKYTERQEILEELDQTIAQSQES 801

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399
           +   +   +     R+    +     +      E  Q   +   Q  R       +K+++
Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEIQQGSLQEEAAQKKLEFTTQKSRIENQLSFEKQRL 861

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                     + +     + I++L    +  + +++      + +    L+
Sbjct: 862 QATKDRIASLEAQHQRDQSLIEELKEE-QEQIRNQLDEYSAELEVLGEQLE 911


>gi|78222234|ref|YP_383981.1| peptidase S1C, Do [Geobacter metallireducens GS-15]
 gi|78193489|gb|ABB31256.1| Peptidase S1C, Do [Geobacter metallireducens GS-15]
          Length = 476

 Score = 37.0 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKE 506
            I D +   +T    +     I +   DG +  A VI + P  +
Sbjct: 108 IITDKDGYIVTNNHVVDNAEEIKVKISDGREFKAKVIGRDPKTD 151


>gi|293341673|ref|XP_001076228.2| PREDICTED: centrosomal protein 135-like [Rattus norvegicus]
 gi|293353094|ref|XP_223341.5| PREDICTED: centrosomal protein 135 [Rattus norvegicus]
          Length = 1140

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 8/166 (4%)

Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353
           N ++  I+ +     S L+ +    + L      +  L    +  LE  I       + +
Sbjct: 561 NNLVSCIEKEKERALSDLRRITAEKEALREKLKNIQELNVVGKSELEKTIEHLTYINHQL 620

Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413
            N          I K     LE +  ++     H+      +K ++  L ++ EQ +  +
Sbjct: 621 ENEKYELQSKILIMKETIESLESKSKLQAQKLSHVTGDSSHQKTEMNSLRIVSEQLQRSL 680

Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
                 +      +E             +    + L+S +++ T++
Sbjct: 681 DDCQHRLSIKRGELESA--------QEQIKALEQKLESLSHRMTMQ 718


>gi|195539581|gb|AAI67944.1| Unknown (protein for IMAGE:7744353) [Xenopus (Silurana) tropicalis]
          Length = 1220

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/160 (8%), Positives = 47/160 (29%), Gaps = 6/160 (3%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            + +K +++ + +  + L    + L   R   ++L  + +  +  +  +       +   
Sbjct: 369 NQKLKAELSEVETKYQHLKAEFKQLQQQREEKEQLSLQQQSEINQLHSKLLETERQLGEA 428

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                    +   +    E+Q    Q+          EK      L    E+ + +    
Sbjct: 429 HGRLKEQRQLSAEKLMDKEQQVADLQLKLSRAEEQLKEKTSASTDLQHQLEKIRQQHQEQ 488

Query: 417 HTHIKKLITRIEFILS------HKIKSCHTSVSITTRILQ 450
               +   +++    +       +I      +     +L+
Sbjct: 489 TNLQQNTTSKLREAQNDLEQVLRQIGDKDQKIQNLEALLE 528


>gi|146320384|ref|YP_001200095.1| DNA polymerase III, alpha subunit [Streptococcus suis 98HAH33]
 gi|145691190|gb|ABP91695.1| DNA polymerase III, alpha subunit [Streptococcus suis 98HAH33]
          Length = 822

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +  + D    +D  ++  +  +   + EEG    + G++       + Q+++E L P   
Sbjct: 698 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 755

Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137
                 LE R+       +     
Sbjct: 756 EKFWILLENREHDYAVARILDKYR 779


>gi|146318196|ref|YP_001197908.1| DNA polymerase III DnaE [Streptococcus suis 05ZYH33]
 gi|145689002|gb|ABP89508.1| DNA polymerase III, alpha subunit [Streptococcus suis 05ZYH33]
          Length = 1036

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 54  YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113
           +  + D    +D  ++  +  +   + EEG    + G++       + Q+++E L P   
Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969

Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137
             +   LE R+       +     
Sbjct: 970 EKVWILLENREHDYAVARILDKYR 993


>gi|119571563|gb|EAW51178.1| hCG27198, isoform CRA_d [Homo sapiens]
          Length = 1581

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1213 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1332

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1333 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1393 NMEKLTEERDQRIAA 1407


>gi|56159917|gb|AAV80770.1| SP-A receptor subunit SP-R210 alphaS [Homo sapiens]
          Length = 1581

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1213 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1332

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1333 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1393 NMEKLTEERDQRIAA 1407


>gi|186685788|ref|YP_001868984.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102]
 gi|186468240|gb|ACC84041.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102]
          Length = 1223

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 61/212 (28%), Gaps = 36/212 (16%)

Query: 277  VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +   +   I    ++    ++  +  +      LK L N  Q L       +    E E
Sbjct: 839  SQTPSEWQQIQATIKIQEQHLQQRETALREAEQRLKNLENQQQRLQEKIQEAETRITEYE 898

Query: 337  HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH--------------IEQ 382
                      +  F+ I    +            +  L +++                +Q
Sbjct: 899  TQQISCKDAIHHVFSQITTINEQITQTRLSLAQMEQNLGEEKQKRDATELEVRSHLLRQQ 958

Query: 383  IVKQHLRYIFLEKKEKIAILHMLREQTKN----------------RIFYLHTHIKKLITR 426
             ++  +  +   ++++   L  L+ Q ++                 +  L   ++ L  R
Sbjct: 959  QLQWEIEKLKETQEKRREELIALQSQLRDMGAELPNPLPEVPDKVDLEELQKELRSLTKR 1018

Query: 427  IE------FILSHKIKSCHTSVSITTRILQSF 452
            ++       +   + +     +   T+ L++ 
Sbjct: 1019 LQAMEPVNMLALEEYERTQNRLQELTQKLETL 1050


>gi|330960231|gb|EGH60491.1| chromosome segregation protein SMC [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 1162

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|322802859|gb|EFZ23051.1| hypothetical protein SINV_80610 [Solenopsis invicta]
          Length = 7174

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/186 (10%), Positives = 48/186 (25%), Gaps = 12/186 (6%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330
             E   + + +  +         +    N      K LP     +   R   DR       
Sbjct: 5933 WEEYLTHVQDFLSSGMPGDYNGLSEHRNLCEVHRKLLPEQQNLILTVRQGEDRDRSVAEQ 5992

Query: 331  ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
               L       L  I+ R     + I    K       +    + +  ++Q +       
Sbjct: 5993 FNALTNLHNETLARILERHAAVRDRISAWDKYRLDQGKLLTWLKEVERERQRMHLQFIHL 6052

Query: 388  LRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
             R   I    +  +  + +   Q ++        +      +   +  +  +    ++  
Sbjct: 6053 RRLDKILQRIQTLLDKMPVGEAQIESLQEQQEYLLTNCDEALAVSIRMEHAANVQRIANM 6112

Query: 446  TRILQS 451
               L++
Sbjct: 6113 RAGLET 6118


>gi|320659897|gb|EFX27445.1| putative tail component of prophage CP-933K [Escherichia coli
           O55:H7 str. USDA 5905]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|319411599|emb|CBQ73643.1| probable SMC1-chromosome segregation protein [Sporisorium
           reilianum]
          Length = 1243

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/218 (7%), Positives = 58/218 (26%), Gaps = 26/218 (11%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           + +D          E  +   +   +++      + + +  + K        +   L  +
Sbjct: 715 FVSDDEMVAKITGLEADLRSAQDELAAVNTRLTGIRDELKNIDKQTKE----MQPKLRTA 770

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF---------NHIINRIKSDFLIHNIQK 368
              L   + ++  L   +    + I     R              +  ++         +
Sbjct: 771 KTELEQLQRKMSTLEEVVNREEDRIFAAFCRRIGVDNIREYEERQVRLMERQSDARLQFE 830

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI- 427
           ++   L  Q + E+   +  +      ++ IA      +  + +       +  ++  I 
Sbjct: 831 SQLARLNHQANFERQQIESTQERLETLRQAIAREGQKLQSWQAQKKGKQEQLDGMLEEIQ 890

Query: 428 ------------EFILSHKIKSCHTSVSITTRILQSFA 453
                              ++     +    R+L S +
Sbjct: 891 ELQAQLTQLQTQNEAKKATLEEKRVELQKAARLLDSLS 928


>gi|291281755|ref|YP_003498573.1| putative tail component of prophage CP-933K [Escherichia coli
           O55:H7 str. CB9615]
 gi|290761628|gb|ADD55589.1| Putative tail component of prophage CP-933K [Escherichia coli
           O55:H7 str. CB9615]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|170036424|ref|XP_001846064.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167879036|gb|EDS42419.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1076

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/177 (7%), Positives = 53/177 (29%), Gaps = 6/177 (3%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           +  Q ++  ++      +  +            +     +        R+  +  E +  
Sbjct: 429 DIHQKNIEEIKEFYQVKLSEMKADYEEENEKEYRIYR--ETLQEEFDRRVKEVTDEHKST 486

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           +  +          +   +K++  +   +        K +   ++  +  R     ++  
Sbjct: 487 MATLQKNHDEIVEELERDLKTEEELLKKEHATNLTEMKIKLAHELEVERQR----MRETG 542

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
              L+      K  +   +  +K+  TR++  +   ++          + L S +Y+
Sbjct: 543 EDRLYEKIRCEKRLLEDKYKCLKEKYTRLKTDVRISLERRKKRREQQQQSLLSNSYE 599


>gi|91784127|ref|YP_559333.1| chromosome segregation protein SMC [Burkholderia xenovorans LB400]
 gi|91688081|gb|ABE31281.1| Chromosome segregation protein SMC [Burkholderia xenovorans LB400]
          Length = 1198

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 52/385 (13%), Positives = 110/385 (28%), Gaps = 24/385 (6%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 655  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 711

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195
                              V +   +       L++ +     Q  E   + +  I     
Sbjct: 712  AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 770

Query: 196  -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253
                 ++E R           R  G + +L   F D  +     +  +        + D 
Sbjct: 771  EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEELTAARGQARDLDR 830

Query: 254  TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
               D  +AA   A              E  +    +LE     +     +     L   L
Sbjct: 831  AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 890

Query: 312  KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                  ++ L  +R  LD L  +L    E  +          +  ++       +++   
Sbjct: 891  DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 945

Query: 372  HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRI 427
             +   +Q IEQ+    +    L+ K    +     +    RI    T +  +       +
Sbjct: 946  RLNG-EQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDEL 1004

Query: 428  EFILSHK--IKSCHTSVSITTRILQ 450
            +     K  + +  T ++     L+
Sbjct: 1005 KAATERKSFLDAQSTDLNSAIETLE 1029


>gi|73964395|ref|XP_537539.2| PREDICTED: similar to DVL-binding protein DAPLE [Canis familiaris]
          Length = 2361

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/244 (7%), Positives = 64/244 (26%), Gaps = 15/244 (6%)

Query: 256  ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
             D   D        + +    +    Q    ++     + +   +            +  
Sbjct: 897  CDNGCDDLYLLMAPSLKTECELLRQNQEEGKHVHNSFKHPVETPVTAAHQGREPWGPSHK 956

Query: 316  NSDQTLSCSRYRLDRLPRELE--HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373
             +   L   + R   L R        + ++  + +H         +  L    Q      
Sbjct: 957  EATMELLRVKDRAIELERNNAALQAEKQLLKEQLQHLETQNVAFSTQILTLQKQSAFLQE 1016

Query: 374  LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433
                   +    Q        +   +   + L +  +      H ++++   ++      
Sbjct: 1017 HNTTLQTQTAKLQVENSTLSSQSAALTAQYTLLQNQQTAKESEHENLQRQQEQLTAAYEA 1076

Query: 434  KIKSCHTSVSIT--------TRILQSFAYKNTLKRGYTS----IQDTNNNFITQKRNLAT 481
             ++     ++            +++  +   TL R        ++D ++  + +K  L  
Sbjct: 1077 LLQDHEH-LAALHERQSTEYEALIRQHSCLKTLHRNLELEHRELRDRHDEVLKRKAELDE 1135

Query: 482  KTRI 485
              ++
Sbjct: 1136 LEKV 1139


>gi|301768224|ref|XP_002919530.1| PREDICTED: centrosomal protein of 164 kDa-like [Ailuropoda
           melanoleuca]
          Length = 1453

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 3/138 (2%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   + ++ +L  +L    E    + +      ++ +K        ++  Q   
Sbjct: 600 RDRRRLLESKQEKMQQLWEKLCQEEEEETLQLHWQKEKSLSSLKEQLRKATEEEETQMRE 659

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           E+ + + Q+  Q       ++    A      ++ +  +  L    +     +E      
Sbjct: 660 EESRRLAQLRAQVQSSAEADEGRIRAEQEASLQRLREELESLQ---RAERASLEQRSRQT 716

Query: 435 IKSCHTSVSITTRILQSF 452
           ++     +  + +  Q+ 
Sbjct: 717 LEQLKEELEASEKREQAL 734


>gi|300899641|ref|ZP_07117872.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           198-1]
 gi|300356766|gb|EFJ72636.1| phage tail tape measure protein, lambda family [Escherichia coli MS
           198-1]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I +   +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|281346172|gb|EFB21756.1| hypothetical protein PANDA_008168 [Ailuropoda melanoleuca]
          Length = 1471

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 3/138 (2%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
            +  + L   + ++ +L  +L    E    + +      ++ +K        ++  Q   
Sbjct: 600 RDRRRLLESKQEKMQQLWEKLCQEEEEETLQLHWQKEKSLSSLKEQLRKATEEEETQMRE 659

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
           E+ + + Q+  Q       ++    A      ++ +  +  L    +     +E      
Sbjct: 660 EESRRLAQLRAQVQSSAEADEGRIRAEQEASLQRLREELESLQ---RAERASLEQRSRQT 716

Query: 435 IKSCHTSVSITTRILQSF 452
           ++     +  + +  Q+ 
Sbjct: 717 LEQLKEELEASEKREQAL 734


>gi|146084523|ref|XP_001465030.1| kinesin [Leishmania infantum JPCM5]
          Length = 1091

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 18/184 (9%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            + +     + ++     A L  ++        +T     + L            RL   
Sbjct: 731 TLLLCACNGILTANSEAAAILQKMLSEREDDLRDTKRLHEEELATQA---ERFCERLKEA 787

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-----QHILEKQQHIEQIVKQ 386
             E     + ++ R       +  R++    I+ +++ R     + + ++ Q  ++ ++ 
Sbjct: 788 LDEGAVQQQQLLDRHRDAVAQLEGRLQRSHEINEMERKRNDKEKEELRQRVQLAQERMRN 847

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
             +      + ++      R ++ + +  L    ++ + R+   L+   +S  +  +   
Sbjct: 848 EYQQEIERLRARVEGDIGDRHKSGDAVRQLQEMHEREMERLRDELNLLKRSKDSDCARLH 907

Query: 447 RILQ 450
             L+
Sbjct: 908 NQLE 911


>gi|48256961|gb|AAT41663.1| Ccd1BbetaL [Mus musculus]
          Length = 477

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 77/246 (31%), Gaps = 29/246 (11%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287
           ++ +I +A   +   II + G E      D  +       +    +    +E L     +
Sbjct: 23  SESIITQAEEKADFVIIPSEGIENRTDEPDSPSSRDWRPGSRGTYLEATWEEQLLEQQEH 82

Query: 288 LEARLNNIIIRLI------------KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
           LE  +      +             + +     +L +   N ++ L   R RLD+   E 
Sbjct: 83  LEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEEQLIIIRSRLDQ-SVEE 141

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
             +L+  + +  +   ++      D L   + +    +L+ +Q + +             
Sbjct: 142 NQDLKKELLKCKQEARNLQGI--KDALQQRLTQQDTSVLQLKQELLRANMDKD------- 192

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455
                 LH      + ++   +  + +    +        +     +    R L   +Y+
Sbjct: 193 -----ELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKLSDASYQ 246

Query: 456 NT-LKR 460
              L+R
Sbjct: 247 QVDLER 252


>gi|29840172|ref|NP_829278.1| single-strand DNA-binding protein [Chlamydophila caviae GPIC]
 gi|37999369|sp|Q823K0|SSB_CHLCV RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
           AltName: Full=Helix-destabilizing protein
 gi|29834520|gb|AAP05156.1| single-strand binding protein [Chlamydophila caviae GPIC]
          Length = 161

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 58  KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110
           KD        +W    +K+    ++G   +V G I+   +        S   I ++++  
Sbjct: 39  KDETVWCKCNVWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGTPQSSLVISVDTIKF 98

Query: 111 SGSG 114
           S  G
Sbjct: 99  SPFG 102


>gi|15830091|ref|NP_308864.1| tail length tape measure protein precursor [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750304|ref|ZP_02775326.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4113]
 gi|168757100|ref|ZP_02782107.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4401]
 gi|168763401|ref|ZP_02788408.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4501]
 gi|168767257|ref|ZP_02792264.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4486]
 gi|168776443|ref|ZP_02801450.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4196]
 gi|168779300|ref|ZP_02804307.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4076]
 gi|168786971|ref|ZP_02811978.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC869]
 gi|168800756|ref|ZP_02825763.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC508]
 gi|195936798|ref|ZP_03082180.1| putative tail length tape measure protein precursor [Escherichia
           coli O157:H7 str. EC4024]
 gi|208807364|ref|ZP_03249701.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208816116|ref|ZP_03257295.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822146|ref|ZP_03262465.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209396645|ref|YP_002269430.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|217325087|ref|ZP_03441171.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|254791954|ref|YP_003076791.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225406|ref|ZP_05939687.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258626|ref|ZP_05951159.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. FRIK966]
 gi|13360296|dbj|BAB34260.1| putative tail length tape measure protein precursor [Escherichia
           coli O157:H7 str. Sakai]
 gi|187768190|gb|EDU32034.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4196]
 gi|188015524|gb|EDU53646.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4113]
 gi|189002806|gb|EDU71792.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4076]
 gi|189355824|gb|EDU74243.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4401]
 gi|189363480|gb|EDU81899.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4486]
 gi|189366470|gb|EDU84886.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4501]
 gi|189373011|gb|EDU91427.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC869]
 gi|189376985|gb|EDU95401.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC508]
 gi|208727165|gb|EDZ76766.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4206]
 gi|208732764|gb|EDZ81452.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208737631|gb|EDZ85314.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209158045|gb|ACI35478.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|217321308|gb|EEC29732.1| putative prophage tail length tape measure protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|254591354|gb|ACT70715.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. TW14359]
 gi|326345675|gb|EGD69414.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7
           str. 1125]
 gi|326347965|gb|EGD71678.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7
           str. 1044]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|332843794|ref|XP_523122.3| PREDICTED: golgin subfamily A member 6A [Pan troglodytes]
          Length = 650

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 45/145 (31%), Gaps = 5/145 (3%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             L    K L    + L        ++      ++     ++         + + + +  
Sbjct: 297 EQLQDEAKHLRQEVEGLEEKLQS--QVENNQALSVLSKEQKQRLQEQEEKLQEQEEMIRE 354

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             +  R+   ++ + +E++ +Q+ R     +++ +        + + R+      ++K  
Sbjct: 355 QEEMLREQEAQRVRELERLCEQNERLRE--QQKTLQEQGERLRKQEQRLHTQEERLQKQE 412

Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449
            R+        K     +      L
Sbjct: 413 KRLWDQEERLWK-KEERLQKQEERL 436


>gi|307182327|gb|EFN69609.1| STE20-like serine/threonine-protein kinase [Camponotus floridanus]
          Length = 1661

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 52/185 (28%), Gaps = 11/185 (5%)

Query: 276  PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPR 333
               +     +   +      +++ ++ K     +          ++     R  L+R   
Sbjct: 1141 ENGKVYDDQIFRKQELRELKMLQKMEQKQFQDLAQKAQFNKDQQEKRFEQERQLLERNAE 1200

Query: 334  ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                 L     ++                     +  + + + ++ ++Q ++   + I L
Sbjct: 1201 ADLEALARQQRQQIERAEAQQEVDLRLASKKIRSEQERELKQFREGLKQELRLLKQEIDL 1260

Query: 394  EKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444
              K+K      +R         E+ K  +  L+   +  + R+      KI         
Sbjct: 1261 MPKDKRKSAFKIRKEKLEAEHEEREKLFLEKLNESHEISLRRLSDSHREKIALMERQFLQ 1320

Query: 445  TTRIL 449
              + L
Sbjct: 1321 QKQQL 1325


>gi|291401043|ref|XP_002716906.1| PREDICTED: pericentrin [Oryctolagus cuniculus]
          Length = 2950

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 4/183 (2%)

Query: 272  EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            E  +   + +Q  +I L + L++    L            +      Q        L R 
Sbjct: 2545 ERLLQSLDDVQKEVIQLRSVLDSKENDLQAVLQQLERERTRERALQSQLEEEQLQHLQRE 2604

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
             +  +   E+ +  + +   H    +            ++ +  +    E ++ Q    +
Sbjct: 2605 AQSSKSLEELRLSLEKQSAQHSRLCVALKHEQTAKDNLQKELQIEYSRCEALLAQERGQL 2664

Query: 392  FLEKKEKIAILHMLREQTK----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
               +K   A  +   E ++     R+       +   T+    L  K+K     VS    
Sbjct: 2665 AELQKSLDAERNRTLELSEALQHERLLTEQLSRRPQETQAHHALLRKLKEEKCRVSELQA 2724

Query: 448  ILQ 450
            +L 
Sbjct: 2725 LLD 2727


>gi|229515598|ref|ZP_04405057.1| GGDEF family protein [Vibrio cholerae TMA 21]
 gi|229347367|gb|EEO12327.1| GGDEF family protein [Vibrio cholerae TMA 21]
          Length = 372

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|194381232|dbj|BAG64184.1| unnamed protein product [Homo sapiens]
          Length = 1086

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 757 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 812

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 813 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 872

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 873 LETVRQEQHKRLEDLRRRHREQERKLQDL 901


>gi|48256955|gb|AAT41660.1| Ccd1Aalpha1L [Mus musculus]
          Length = 710

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338
               LEA     ++   ++    +    K +      L       D   R +        
Sbjct: 297 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 356

Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                  +   + +       +   +          +  +     QQ + Q     L+  
Sbjct: 357 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 414

Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               +  +    +  +    + ++   +  + +    +        +     +    R L
Sbjct: 415 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 473

Query: 450 QSFAYKNT-LKR 460
              +Y+   L+R
Sbjct: 474 SDASYQQVDLER 485


>gi|15800511|ref|NP_286523.1| putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 EDL933]
 gi|12513743|gb|AAG55131.1|AE005257_10 putative tail component of prophage CP-933K [Escherichia coli
           O157:H7 str. EDL933]
          Length = 1021

 Score = 37.0 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
            +        +      +        +      L  A   +++     + R +     L 
Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
              E    R  R    I     +D  + +    R++    ++ +    K+       E  
Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
             +      + Q + +I            R+       +      +S       +   K+
Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679

Query: 457 TLKR 460
            L R
Sbjct: 680 VLAR 683


>gi|332225630|ref|XP_003261986.1| PREDICTED: dystrobrevin alpha isoform 4 [Nomascus leucogenys]
          Length = 395

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 10/160 (6%)

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
            +  L +  + L  S    +       +   +             +     F I   ++ 
Sbjct: 65  YVNQLDHGARMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQ 124

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRI 427
           RQ I E +    +I+++  R     ++         ++       +  L     +L  R+
Sbjct: 125 RQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRM 184

Query: 428 EFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460
             +   + +     +    ++L++        +  +T+ R
Sbjct: 185 SALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 223


>gi|323976123|gb|EGB71216.1| exonuclease SbcC [Escherichia coli TW10509]
          Length = 1047

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 38/153 (24%), Gaps = 12/153 (7%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366
             L   D+    +  R   L + L    +                ++  +         +
Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHTAAL 306

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421
              RQ I E    ++  +           K+   +           Q  +R    +  + 
Sbjct: 307 AHTRQQIEEVNTRLQSTMALRESIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366

Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
               +     S +  ++     ++   + L + 
Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|313901968|ref|ZP_07835384.1| chromosome segregation protein SMC [Thermaerobacter subterraneus
           DSM 13965]
 gi|313467757|gb|EFR63255.1| chromosome segregation protein SMC [Thermaerobacter subterraneus
           DSM 13965]
          Length = 1242

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 6/89 (6%), Positives = 29/89 (32%), Gaps = 2/89 (2%)

Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423
           H + +    + E +  ++  + +  R   L ++ +  ++ +       +       +   
Sbjct: 186 HRLLRLGDILRELEDRLD-GLTEQARRAHLYRQWRDELVDLEARMVTAQAVQAQRRLADH 244

Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452
             R+E  +  ++ +    +        + 
Sbjct: 245 ARRLE-AVRQQVAAARRRLEEAGAARDAL 272


>gi|158335947|ref|YP_001517121.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017]
 gi|158306188|gb|ABW27805.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017]
          Length = 1220

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 65/193 (33%), Gaps = 9/193 (4%)

Query: 301  KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
            K + + +   L+    + Q L     +     +E +  ++ +  +       + + +   
Sbjct: 930  KQERDRVEKHLQERTAAHQQLLWQIQKTQDKQQEHQDLIQQLQTQLQAKATELPDPLPEI 989

Query: 361  FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK---------EKIAILHMLREQTKN 411
                 +++ R+ + + Q+ ++ +   ++  I   ++         EK+  L   R +   
Sbjct: 990  PEDLTLEQLREELQKLQKRLQAMEPVNMLAIEEYERTQERLVELTEKLTTLESERTELLL 1049

Query: 412  RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471
            RI    T   +        +    +S    +S     LQ    ++  + G   +      
Sbjct: 1050 RIENFRTLRYQSFREAYDAIDVNFQSIFAELSDGDGHLQLDNPEDPFQGGLNLVAHPKGK 1109

Query: 472  FITQKRNLATKTR 484
             + +  +++   +
Sbjct: 1110 PVQRLASMSGGEK 1122


>gi|332833192|ref|XP_001168941.2| PREDICTED: hamartin isoform 1 [Pan troglodytes]
          Length = 1113

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              V    + +  N      + ++  +  +I  L    +   N  Q L         +  
Sbjct: 698 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 757

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           EL   L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  
Sbjct: 758 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 817

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +  +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 818 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 872


>gi|332755841|gb|EGJ86198.1| phage tail tape measure protein, lambda family [Shigella flexneri
           K-671]
          Length = 531

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 7/177 (3%)

Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344
             N   ++     RL   +  T   L  A   +++     + R +     L    E    
Sbjct: 28  WTNASTQVEYDQQRLNDLRRKTPEGLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAA 87

Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404
           R  R    I     +D  + +    R++     +  E+ +K++ R    ++  ++ + + 
Sbjct: 88  RHQREIARINAMQYADQAVRDAAIQREN-----ERYEKAIKKNTRATRNDEATRLLLQYS 142

Query: 405 LRE-QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            ++ Q + +I            R+       +      +S       +   K+ L R
Sbjct: 143 QQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 198


>gi|291383894|ref|XP_002708440.1| PREDICTED: DIX domain containing 1 [Oryctolagus cuniculus]
          Length = 679

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/125 (7%), Positives = 35/125 (28%), Gaps = 6/125 (4%)

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
           ++  + +       +   +          +  +     QQ + Q     L+      +  
Sbjct: 357 IQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLAQQDTSVLQLKQELLRAN 414

Query: 399 IAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
           +    +  +    + ++   +  + +    +       ++     +    R L    Y+ 
Sbjct: 415 MDKDELHNQNVDLQRKLDERNRLLGEYQKELGQK-DRLLQQHQAKLEEALRKLSDANYQQ 473

Query: 457 T-LKR 460
             L+R
Sbjct: 474 VDLER 478


>gi|167521079|ref|XP_001744878.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776492|gb|EDQ90111.1| predicted protein [Monosiga brevicollis MX1]
          Length = 600

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 7/126 (5%)

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
           + +R  L RL +  +  L+          +          L   +++ RQH ++ QQ ++
Sbjct: 9   ARTRDDLQRLQQTWKTGLQDAQRETQEARDQARQ------LQVALEQERQHGIKLQQQLD 62

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
           Q      R     + E    L  L ++ +  +       +     +E  L  ++    + 
Sbjct: 63  QAQVSATRQQSRARIELEQQLVDLEQRCR-DLTLDRDVWRDKAQSLERELHAQLAQRASR 121

Query: 442 VSITTR 447
                 
Sbjct: 122 RDAAEA 127


>gi|118103307|ref|XP_418249.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 1012

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 48/156 (30%)

Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
             + +LL+ L +    +S     ++     +    +    +  R    +    + +F   
Sbjct: 640 QRIQTLLQLLFSLQAVISQQDSYIEVQRATMVDREKQYRLQSTRGNVLLEQEKQRNFEKQ 699

Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
             +      L+ Q  +EQ   +  R     + E        RE+   ++       +K +
Sbjct: 700 REELMNVQKLQSQLKLEQQRWERERSQQQRELEISEAHLQRREEETRQLKDKLIQDRKEL 759

Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
            R      H ++    +     +  +       LK+
Sbjct: 760 ERQREAYQHDLERLREAQRAVEKERERLDQLRKLKK 795


>gi|118404680|ref|NP_001072623.1| serine/threonine kinase 10 [Xenopus (Silurana) tropicalis]
 gi|114107626|gb|AAI23020.1| serine/threonine kinase 10 [Xenopus (Silurana) tropicalis]
          Length = 951

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/190 (8%), Positives = 54/190 (28%), Gaps = 10/190 (5%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
             +        E A+  ++  +      E      + +L   K      + K      + 
Sbjct: 603 HQKQQIERMEQEHALRRRDEARRIRTEQERDHVKFLEQLKLRKKELKAQVEKLPRQQRR- 661

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
               + ++D   ++     +  + ++       +  I  +       K R+ + +KQQ +
Sbjct: 662 -DAMKVQMDDFAQKKHIEEQQFLNKQKEDLTLALRVIVLENRKEIYNKEREFLNKKQQLL 720

Query: 381 EQIVKQHLRYIFLEKKEKIAI--------LHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
                          +E+  +          + R +   +       +++   R+   L 
Sbjct: 721 RDREAVIWDLEERHLQERHQLVKQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMMEQLK 780

Query: 433 HKIKSCHTSV 442
            + +     +
Sbjct: 781 LRQQQERARL 790


>gi|91079989|ref|XP_970719.1| PREDICTED: similar to AGAP004877-PA [Tribolium castaneum]
          Length = 877

 Score = 37.0 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 3/186 (1%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            E      +      +NL  +    +    +    T++ L K     DQ    ++   D 
Sbjct: 375 LERINIDLKTRLEETVNLYEQTQRDLRNKQQELQRTVHELDKTREQKDQLARENKKLGDD 434

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN---RQHILEKQQHIEQIVKQH 387
           L        E+                + D L    ++    R+    + Q +     Q 
Sbjct: 435 LTDARNTISELTRRLHELELELRRLENERDELTAAYKEAEAGRKAEELRSQRLSSEFAQF 494

Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447
                   +EK   +  +R+ T   I  L+  + +  TR++  +    K     ++    
Sbjct: 495 RHEAEKRLQEKDEEIEAIRKATSIEIEQLNARVVEAETRLKTEVQRIKKKLQIQITELEM 554

Query: 448 ILQSFA 453
            L +  
Sbjct: 555 SLDAAN 560


>gi|332025287|gb|EGI65458.1| Nucleoprotein TPR [Acromyrmex echinatior]
          Length = 2277

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/158 (9%), Positives = 46/158 (29%), Gaps = 2/158 (1%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +   +       + L   + +    +     +       +  + + I+  K        
Sbjct: 717 RLRAQLDSANERFSLLQGNVASYKSQIKALEEKCTNYNITISKHEQSIMILKDETLAAQT 776

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412
              +++  + N+++ RQ + + +  +  E+ V Q  R      K  +  +    E+ +  
Sbjct: 777 RLSRAEVQLENLRQERQLLRDTEGRLLKEREVYQRERQTQALLKADMESIKASLERVQAE 836

Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
                        R    L  +++            L+
Sbjct: 837 GQLRAEQRFDDANRECAALRRRLQEEQDRFRELAGHLE 874


>gi|224083219|ref|XP_002190041.1| PREDICTED: DIX domain containing 1 [Taeniopygia guttata]
          Length = 686

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/187 (9%), Positives = 48/187 (25%), Gaps = 14/187 (7%)

Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338
            LE      ++    +    +    K +      L       D      E +        
Sbjct: 278 YLENSWEEQLLEQQDHLEKEMEEAKKMISGLQALLLNGSLPEDEQEGSFELSERGACPEE 337

Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
               +   + +       +   +          +  +  L+++   +      L+   L 
Sbjct: 338 QLIIIRSRLDQSVEENQDLKKELLKYKQEARNLQGIKDALQQRLLQQDAAVLQLKQELLR 397

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454
                  LH      + ++   +  + +    +       ++   T +    R L   +Y
Sbjct: 398 ANMDKEELHNQNVDLQRKVEERNRLLAEYKKELCQK-DRHLQQHQTKLDEMLRQLSEASY 456

Query: 455 KNT-LKR 460
           +   L+R
Sbjct: 457 QQVDLER 463


>gi|168044246|ref|XP_001774593.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674148|gb|EDQ60661.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 857

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 70/250 (28%), Gaps = 14/250 (5%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP---N 316
           +  +        E  +   ++ +   I L   +  I   + +         ++       
Sbjct: 68  SHCQCSNSKAMIERKLWQPKYCKQWSIKLINLMEGIFQDVDRVTKKLFLEWIERPNKNLQ 127

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEI-----IIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           + + L     +  +L +  +  LE       +          +  +  D         + 
Sbjct: 128 ATELLREFERQYSQLSKVEKLTLEANKVDLFLQAADGELQGKLELLLEDKEEDEGLTTKW 187

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
             +E    +    ++      ++K  +     +             T + K        +
Sbjct: 188 KNVEDAVGLLTKRERRKDRSNIQKIVQAPKAPVRTTPPTMPTVQPSTSLSKKADMGMEEI 247

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFF 490
              ++     ++       +   KN  K+GY  I   +    +  + +L     +  NF 
Sbjct: 248 IRGMRDLQIKLTRLEENTSTNNSKNVSKQGYGIICWKDGKIALKNREDL-----LQTNFG 302

Query: 491 DGQANAIVIN 500
            G+  A+V +
Sbjct: 303 KGRMRALVQD 312


>gi|148693805|gb|EDL25752.1| DIX domain containing 1, isoform CRA_a [Mus musculus]
          Length = 437

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338
               LEA     ++   ++    +    K +      L       D   R +        
Sbjct: 26  RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 85

Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                  +   + +       +   +          +  +     QQ + Q     L+  
Sbjct: 86  PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 143

Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               +  +    +  +    + ++   +  + +    +        +     +    R L
Sbjct: 144 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 202

Query: 450 QSFAYKNT-LKR 460
              +Y+   L+R
Sbjct: 203 SDASYQQVDLER 214


>gi|110640335|ref|YP_668063.1| hypothetical protein ECP_0124 [Escherichia coli 536]
 gi|191174243|ref|ZP_03035753.1| conserved hypothetical protein [Escherichia coli F11]
 gi|300984659|ref|ZP_07177047.1| hypothetical protein HMPREF9553_02744 [Escherichia coli MS 200-1]
 gi|110341927|gb|ABG68164.1| hypothetical integral membrane protein YacH [Escherichia coli 536]
 gi|190905476|gb|EDV65105.1| conserved hypothetical protein [Escherichia coli F11]
 gi|300306637|gb|EFJ61157.1| hypothetical protein HMPREF9553_02744 [Escherichia coli MS 200-1]
 gi|324012225|gb|EGB81444.1| hypothetical protein HMPREF9533_03740 [Escherichia coli MS 60-1]
          Length = 585

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 407 AASQFQQRTHTAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 466

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585


>gi|124513454|ref|XP_001350083.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7]
 gi|74842797|sp|Q8IDX6|RBP2A_PLAF7 RecName: Full=Reticulocyte-binding protein 2 homolog a
 gi|23615500|emb|CAD52492.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7]
 gi|33413772|gb|AAN39443.1| normocyte binding protein 2a [Plasmodium falciparum]
          Length = 3130

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 326  YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               +RL RE +  L+     + +       + K + L    Q+  Q   E ++  ++ ++
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762

Query: 386  QHLRYIFL-------EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            +  +           +++E++     L+ Q + R+       ++   R+E     ++   
Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQL-QK 2821

Query: 439  HTSVSITTR 447
               +    +
Sbjct: 2822 EEELKRQEQ 2830


>gi|13345187|gb|AAK19244.1|AF312916_1 reticulocyte binding protein 2 homolog A [Plasmodium falciparum]
          Length = 3130

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 326  YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
               +RL RE +  L+     + +       + K + L    Q+  Q   E ++  ++ ++
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762

Query: 386  QHLRYIFL-------EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            +  +           +++E++     L+ Q + R+       ++   R+E     ++   
Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQL-QK 2821

Query: 439  HTSVSITTR 447
               +    +
Sbjct: 2822 EEELKRQEQ 2830


>gi|46559410|ref|NP_835219.1| dixin [Mus musculus]
 gi|81873447|sp|Q80Y83|DIXC1_MOUSE RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1;
           Short=Coiled-coil-DIX1; AltName: Full=DIX
           domain-containing protein 1
 gi|29165779|gb|AAH48182.1| DIX domain containing 1 [Mus musculus]
 gi|38648734|gb|AAH63085.1| DIX domain containing 1 [Mus musculus]
 gi|48256957|gb|AAT41661.1| Ccd1Abeta1L [Mus musculus]
          Length = 711

 Score = 37.0 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338
               LEA     ++   ++    +    K +      L       D   R +        
Sbjct: 298 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 357

Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                  +   + +       +   +          +  +     QQ + Q     L+  
Sbjct: 358 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 415

Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               +  +    +  +    + ++   +  + +    +        +     +    R L
Sbjct: 416 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 474

Query: 450 QSFAYKNT-LKR 460
              +Y+   L+R
Sbjct: 475 SDASYQQVDLER 486


>gi|331651018|ref|ZP_08352046.1| putative membrane protein [Escherichia coli M718]
 gi|331051472|gb|EGI23521.1| putative membrane protein [Escherichia coli M718]
          Length = 615

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 49/188 (26%), Gaps = 9/188 (4%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA          +          Q      +             +   +   ++  P + 
Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQNQ 487

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370
           Q    +R R+     E    +   +    +  +       RI+S             + R
Sbjct: 488 QRREAARQRIQSASPEQRQAVREKMQTNPQIQQRREAARERIQSASPEQRQVFKEKVQQR 547

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429
               +++ +  Q V+          +EK+      R    N    L+   +     R+  
Sbjct: 548 PLNQQQRDNARQRVQSASPEQRQVFREKVQESRPQRPNDSNHTARLNNDQRSAVRERLSE 607

Query: 430 ILSHKIKS 437
             + +++ 
Sbjct: 608 RGARRLER 615


>gi|256847359|ref|ZP_05552805.1| chromosome segregation protein SMC [Lactobacillus coleohominis
           101-4-CHN]
 gi|256716023|gb|EEU30998.1| chromosome segregation protein SMC [Lactobacillus coleohominis
           101-4-CHN]
          Length = 1189

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 60/190 (31%), Gaps = 12/190 (6%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
           +        L+       +R +      L S+ K L  S+Q  +    +  +    L+  
Sbjct: 213 QDYLEQKQKLDQFDRTQTVRQVLRDQAELTSIRKKLGQSNQMSAQYDQQTKKAKDTLQKL 272

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
            E    +  +  +   N + +        +N+Q +   +Q      +Q L     E KE+
Sbjct: 273 QENR-RQVLQQKDQAQNEVTAKVEEIAKLQNQQSLSSIRQEQRLKDQQRLTSQKQELKER 331

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIE-----------FILSHKIKSCHTSVSITTR 447
              L     Q +++   L + +     +++             L+ +++          +
Sbjct: 332 QEQLTQQLAQNEHQAAELKSKLSTERKKLKDLRSLSAAERVQRLNQELEQLQERQVDLMQ 391

Query: 448 ILQSFAYKNT 457
            L +   +  
Sbjct: 392 QLTTLHNERV 401


>gi|34532311|dbj|BAC86384.1| unnamed protein product [Homo sapiens]
          Length = 842

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367
               + + +  + +  ++ + +   ++    +E  + +K  H     + + S       +
Sbjct: 665 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 720

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426
           K ++   E ++ ++++ ++H + +   +++  A     R +    +      +++   R 
Sbjct: 721 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 780

Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452
              +      +++          R LQ  
Sbjct: 781 LETVRQEQHKRLEDLRRRHREQERKLQDL 809


>gi|72162546|ref|YP_290203.1| hypothetical protein Tfu_2147 [Thermobifida fusca YX]
 gi|71916278|gb|AAZ56180.1| band 7 protein [Thermobifida fusca YX]
          Length = 450

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 5/194 (2%)

Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
            WT  D+  D     P  A  +A P KE++    I    +           +    ++  
Sbjct: 132 PWTRVDFVVDTSTEIPYNAPVLACPTKENVPLKSIEFFLKFRIT-NATAFVRTIGASNFD 190

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR----IKSDFLIHNIQ 367
             L ++ Q     R RL +     +     +   +      +       +  +     + 
Sbjct: 191 LVLSSAVQDAIRQRSRLVQTENAHDLRGSDVADMQELLNRQLSRYGVQIMGCNIPDVQLP 250

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
              Q  L  ++ + + +  + +   L +K +I  L M  E++K         +   + R 
Sbjct: 251 DQYQQHLSTRERVAKEMVAYEQEWELIRKRRIDTLLMDIERSKKTRDAKIVEVNAALNRA 310

Query: 428 EFILSHKIKSCHTS 441
              ++  ++   T 
Sbjct: 311 RQDVAQMLEEQETE 324


>gi|331015923|gb|EGH95979.1| chromosome segregation protein SMC [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 1162

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|330958410|gb|EGH58670.1| cointegrate resolution protein T [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 326

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 73/257 (28%), Gaps = 15/257 (5%)

Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265
             +  + +LARG     D                         H +       A D+   
Sbjct: 1   MQKARVALLARGENPSIDAVRIEMGNTGSKTTIHRYLKELDTAHAS-------APDINEE 53

Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325
                A +A  ++E  +  +             L       L++  + +    + L    
Sbjct: 54  LTELVARLAQRLEEQARERIDQAHEEYETSCNDL----RQQLSTAQQQIDELQKHLQQRD 109

Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385
             L++    L H  + +   +      +  R+  +  + +       + EK QH  + ++
Sbjct: 110 ETLEQQAAALLHTQQTLQSTQTEQARLLQARLDLEARLQDKDGQIGSLEEKHQHAREALE 169

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHTSV 442
            +   I  +++ +        +Q +  +      +        ++       +    T+ 
Sbjct: 170 HYRNSIKDQREHEQQRHEGQVQQLQMELRQAQQSLAMRQEDITQLNRDNERLLAENRTAQ 229

Query: 443 SITTRILQSFAYKNTLK 459
               R     + K TL+
Sbjct: 230 RELHRQQDLLS-KATLQ 245


>gi|152977313|ref|YP_001376830.1| chromosome segregation ATPase-like protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026065|gb|ABS23835.1| Chromosome segregation ATPase-like protein [Bacillus cytotoxicus
           NVH 391-98]
          Length = 480

 Score = 37.0 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410
             +  ++++        +  +  LE Q +  Q   + L+     K E+I  L   +++ +
Sbjct: 321 ESLKQQLETKDEQIQKLEQEKQKLETQMNQLQGGPESLKQQLETKDEQIQKLEQEKQKLE 380

Query: 411 NRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAYKNT---LKR 460
            ++  L    + L  ++E       K++     +      LQ    +N    L+R
Sbjct: 381 TQMDQLQREPENLKQQLEMKDEQIQKLEQEKQKLETQMNQLQG-GPENLKQQLER 434


>gi|302188500|ref|ZP_07265173.1| exonuclease SbcC [Pseudomonas syringae pv. syringae 642]
          Length = 1214

 Score = 37.0 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 4/148 (2%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
           + L ++ Q L   + +  +L  + +   E+   R       +  +   +        +  
Sbjct: 238 QRLSDAQQQLKAHQTQQRQLEIKQQWLTELHRLRD----EQLAAQEALNSAQQAWDDHSG 293

Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431
                 Q      ++H     +    ++  L     Q + ++  LH   ++L +R     
Sbjct: 294 ARQTLGQLERLGPQRHRFARRVTLNAQLEPLAEQIRQHQQQLTSLHEQQQQLESRRTQAQ 353

Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLK 459
           +  +++  T  S    +LQ+F  +NTL 
Sbjct: 354 TSLLEAQQTHSSAKPLLLQAFEAQNTLN 381


>gi|194856562|ref|XP_001968777.1| GG25057 [Drosophila erecta]
 gi|190660644|gb|EDV57836.1| GG25057 [Drosophila erecta]
          Length = 3969

 Score = 37.0 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                   + +  +         ++ +          L +    LS          +   L
Sbjct: 2719 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2778

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                   L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 2779 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2838

Query: 392  FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 2839 HLKHRLDAMIQQLEQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2898

Query: 450  QS 451
            ++
Sbjct: 2899 KT 2900


>gi|71410717|ref|XP_807640.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871684|gb|EAN85789.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1396

 Score = 37.0 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 41/134 (30%), Gaps = 1/134 (0%)

Query: 318  DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
               L C+         +LE  +++   R     N  +   +S FL    +  R       
Sbjct: 1176 RAQLRCALQLQREAAAQLEAQIQMRKDRMVSFTNAFVRARESCFLTERRRCCRLAEKLYI 1235

Query: 378  QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
            +   +      +   + ++     L   R++ +  +      I  ++ RI+  +   +  
Sbjct: 1236 RRCVRRELLRDKSATVIQRAVRHWLARRRQREEEALALRTHVIAHIV-RIQSAMRRFLAQ 1294

Query: 438  CHTSVSITTRILQS 451
                +       Q+
Sbjct: 1295 KQYRLLRYLSQRQA 1308


>gi|301604037|ref|XP_002931667.1| PREDICTED: liprin-alpha-2-like [Xenopus (Silurana) tropicalis]
          Length = 1232

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 28/351 (7%), Positives = 95/351 (27%), Gaps = 20/351 (5%)

Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169
           PSG  + +  L+  K          ++ +  +    + ++ +     A  ++I+      
Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELTAANQEIVALREQN 205

Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229
             ++  +   +    E  + +       +      +    D          + +  ++  
Sbjct: 206 AHIQRKMGTGEGPEQEALEGMEQGQKIHDKRLSNGSIDSNDDASQMVELQELLEKQNYEM 265

Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289
             +                 E   +L+    ++     +   E+    + + +      E
Sbjct: 266 TQM----------------KERLSSLSARVGEVEQEAESARKELVKTEEMNTKYQRDIRE 309

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           A      +      +       +    S   ++            +   +E    +    
Sbjct: 310 AMAQKEDMEERITTLEKRYLSAQREATSIHDINDKLENELANKEAILRQMEEKNRQLQER 369

Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408
                 +++    +   +   +   E  Q I  + K   R+  +E++ +     +  + Q
Sbjct: 370 LEMAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 427

Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458
              R        ++   R+   +   +   +  +       + +   KN L
Sbjct: 428 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNIL 478


>gi|291225470|ref|XP_002732724.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 470

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316
           D   D++    T          ++     +NL +    +  R  +         L+    
Sbjct: 93  DRVRDVQ-NVQTRCGCCNSQNGDNKGQKSLNLRSEKEAVEERQREVARQQEVERLR---- 147

Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
                +  + +     +      +  I ++      +  + + +      +  R+ + EK
Sbjct: 148 ---LENERQQKQLEEEKHKLLRRQQEIEQELIQRKQLSQQQELEMERQRKEALRREMEEK 204

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAI---LHMLREQTKNRIFYLHTHIKKLITRIEFIL-- 431
           +Q   QI K   +     K++++A    L M R   +        + ++     +  +  
Sbjct: 205 KQRQAQINKLERQRQREIKQQELAHQQELEMERRHMEESRKEREANKQRQEQIRKQEIER 264

Query: 432 SHKIKSCHTS 441
             +++     
Sbjct: 265 QRQLELQRQR 274


>gi|241666464|ref|NP_001155899.1| hamartin isoform 4 [Homo sapiens]
 gi|221044412|dbj|BAH13883.1| unnamed protein product [Homo sapiens]
          Length = 1113

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              V    + +  N      + ++  +  +I  L    +   N  Q L         +  
Sbjct: 698 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 757

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           EL   L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  
Sbjct: 758 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 817

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +  +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 818 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 872


>gi|194909958|ref|XP_001982044.1| GG11254 [Drosophila erecta]
 gi|190656682|gb|EDV53914.1| GG11254 [Drosophila erecta]
          Length = 2102

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 1/149 (0%)

Query: 305  NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364
                   ++L N    L     +  R  +E +  L          FN  I  +++     
Sbjct: 966  QEALVREESLKNHVARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACA-EE 1024

Query: 365  NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424
              +++ + IL+ +  +E+ ++Q L+ +   K ++I  L       +  I  L    ++ +
Sbjct: 1025 AAKRHGEEILQLRNALEKRMQQALQALQTAKDDEIEKLQERLATLQAHIESLVQQHEEAL 1084

Query: 425  TRIEFILSHKIKSCHTSVSITTRILQSFA 453
             R E      +   H         L++ +
Sbjct: 1085 IRAESEKQQALLIAHRDKQAVAERLEAVS 1113


>gi|182413544|ref|YP_001818610.1| protease Do [Opitutus terrae PB90-1]
 gi|177840758|gb|ACB75010.1| protease Do [Opitutus terrae PB90-1]
          Length = 513

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 1/65 (1%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522
            I   +   +T    +     I + F DG +  A V+   P  +    K +  +      
Sbjct: 124 VIVSPDGYILTNSHVVKGADTIKVTFGDGRELTAKVVGTDPQTDLAVIKVEAKDLPAITF 183

Query: 523 GTQGE 527
                
Sbjct: 184 ADSDS 188


>gi|109947607|ref|YP_664835.1| outer membrane protein 15 [Helicobacter acinonychis str. Sheeba]
 gi|109947627|ref|YP_664855.1| outer membrane protein 16 [Helicobacter acinonychis str. Sheeba]
 gi|109714828|emb|CAJ99836.1| outer membrane protein 15 [Helicobacter acinonychis str. Sheeba]
 gi|109714848|emb|CAJ99856.1| outer membrane protein 16 [Helicobacter acinonychis str. Sheeba]
          Length = 367

 Score = 37.0 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 50/166 (30%), Gaps = 13/166 (7%)

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR--KYRHFNHIINRIKSDFLIHNIQ 367
           +  A+ +++  L+  R ++        + L  +  +          IN    +    +  
Sbjct: 37  MSYAIQHNNPFLNQERIKIISNAYNQINGLNQVANQVKNMPKTFEYINNNLKNNPKPSAT 96

Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
             +      Q  ++ I K  +         K+       ++       L T++K L  + 
Sbjct: 97  AMQAEAYYLQSTLKNIEKIVMVSHSAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQF 156

Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKN-----------TLKRGY 462
               ++ + S  +  +  +  L S                TL  GY
Sbjct: 157 NHSQNNILASLSSQTARLSNSLNSLDPSAHSKNISNMYGVTLSVGY 202


>gi|325496050|gb|EGC93909.1| hypothetical protein ECD227_0147 [Escherichia fergusonii ECD227]
          Length = 618

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/195 (9%), Positives = 51/195 (26%), Gaps = 12/195 (6%)

Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308
           H    T+ D     +    +          +    +L    +  +         +   + 
Sbjct: 430 HSAPVTMRD----TQRQAASQQFHQREQQDDFRDYALPRRNSNTSRFNGEYYNREDWNVR 485

Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368
              + L    +    +R R D    E        +  + R  +          +     +
Sbjct: 486 PPQRQLTQQQR--EKARKRYDSATPEQRQAFREKVQNQQRPLSQQQRDSARQRIQSASPE 543

Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEK------KEKIAILHMLREQTKNRIFYLHTHIKK 422
            RQ   EK Q+ ++ + Q  R    ++      +++          T             
Sbjct: 544 QRQAFREKAQNQQRPLSQQQRDSARQRIQSATPEQRQVFRENRLNDTSRVSRLSSEQRSA 603

Query: 423 LITRIEFILSHKIKS 437
           +  R+    + +++ 
Sbjct: 604 VRERLSERGARRLER 618


>gi|291410951|ref|XP_002721747.1| PREDICTED: CDC42-binding protein kinase beta [Oryctolagus
           cuniculus]
          Length = 1762

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 19/216 (8%)

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
           +T     +D      T         ++  +    +L+        R I+        L +
Sbjct: 544 FTTESCFSDRGCLKSTMQTHTLTEDEDVQRDLENSLQVEAY---ERRIRRLAQEKLELSR 600

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF-------NHIINRIKSDFLIHN 365
            L  S QT+         L           +  +           + +  +++    +  
Sbjct: 601 KLQESTQTVQSLHGSTRALSSSNRDKEIKKLNEEIERLRSKVADSSRLERQLEDTVSLRQ 660

Query: 366 IQK---NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
             +    R   LEKQ    +  K+ L    +E  E++            +         +
Sbjct: 661 EHEDCTQRLKGLEKQCRAARQEKEDLHKQLVEASERLKSQAKELRDAHQQRKLALQEFSE 720

Query: 423 LITRI------EFILSHKIKSCHTSVSITTRILQSF 452
           L  R+      +  +S +++     V +  + + S 
Sbjct: 721 LNERMAELRSQKQKVSRQLRDREEEVEVAMQKMDSL 756


>gi|239503165|ref|ZP_04662475.1| ATPase [Acinetobacter baumannii AB900]
          Length = 1198

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 4/203 (1%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
           A  +A + T     A+      Q       ++      + +K    +L  + K +   DQ
Sbjct: 764 AWQQASSQTAKQTWAILDARAKQLEQQEQLSQRFEQQQQELKMLSASLEQMTKQIDEIDQ 823

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQ 377
            L     +  +   +    ++ +  R     +   I +  K         + +Q   + +
Sbjct: 824 NLQEITLKGQQNNEKAVSLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTR 883

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           QH EQ  +   +      +        L  Q +N +          +T +  I S + + 
Sbjct: 884 QHFEQQKQALDQLKHQY-QHTEQHQQQLDGQIQNWLKAHTDFQASDLTALIQINSAQEQD 942

Query: 438 CHTSVSITTRIL-QSFAYKNTLK 459
               ++   R+L ++ +   T++
Sbjct: 943 IRNRLNHAERLLSEASSALKTMQ 965


>gi|213968902|ref|ZP_03397042.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301385374|ref|ZP_07233792.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063630|ref|ZP_07255171.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato
           K40]
 gi|302133899|ref|ZP_07259889.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926201|gb|EEB59756.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato
           T1]
          Length = 1162

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|195392590|ref|XP_002054940.1| GJ19063 [Drosophila virilis]
 gi|194149450|gb|EDW65141.1| GJ19063 [Drosophila virilis]
          Length = 1494

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 69/239 (28%), Gaps = 24/239 (10%)

Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309
           E    L D          T +A     +       +  L    N              + 
Sbjct: 625 EQLQYLIDMVGANFNQNTTSSATTENRLVYMKNMLICLLTRICN-----------QDKHK 673

Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369
             + L N    L  SRY+++   + L         +        +  I     + +I + 
Sbjct: 674 KPENLLNQHCRLQTSRYQMNVSIQNLPKQQHNAANKNQLQLEQELKTITEKAKLQSIDQT 733

Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429
           +     + + +E   +   +      ++++   +  ++Q + +I      ++K  +  + 
Sbjct: 734 QLIQQLEDERLELCSQ---KLEKAHVEQELMASNKKQKQLEQKIIEQTELLQKGESTTQS 790

Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488
                I      +    R L +  YK  L               T +  L  +  +LI+
Sbjct: 791 HQDQIILQ-RQQLDKQQRELNALQYKLELA---------EQQVKTAEAQLQKQESLLIH 839


>gi|170085187|ref|XP_001873817.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651369|gb|EDR15609.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1196

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 7/153 (4%)

Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
                           +L     +L   +      + +              R  RL   
Sbjct: 152 HEDHRIHIQRQRQHHEQLLQQEQQLHHQRAQEAEHVQRVQDMERVHRQQEVERQQRLQEV 211

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
             H ++       + F  +  + +S       +  RQ I E +   ++ ++Q  +    E
Sbjct: 212 ERHRMQEK-----QRFQELERQQRSQEQQRMHELERQRIQELEYRQQRALEQERQIRLQE 266

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427
           ++ + +      +  +     L   +  L  R+
Sbjct: 267 ERHRRSQEMEHHQLLRQ--EELRRPVVPLEPRM 297


>gi|187924441|ref|YP_001896083.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN]
 gi|187715635|gb|ACD16859.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN]
          Length = 1198

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 106/384 (27%), Gaps = 22/384 (5%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 655  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 711

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195
                                +   +       L++ +     Q  E   + +  I     
Sbjct: 712  AAIRAEAAHTQAAQVLTDARQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 770

Query: 196  -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253
                 ++E R           R  G + +L   F D  +     +  +        + D 
Sbjct: 771  EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEQLTAARGQARDLDR 830

Query: 254  TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
               D  +AA   A              E  +    +LE     +     +     L   L
Sbjct: 831  AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 890

Query: 312  KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                  ++ L  +R  LD L  +L    E  +          +  ++       +++   
Sbjct: 891  DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 945

Query: 372  HILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428
             +  +Q   Q     V +      L    K + L     +  N I  L       +  ++
Sbjct: 946  RLNGEQFVEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDELK 1005

Query: 429  FILSHK--IKSCHTSVSITTRILQ 450
                 K  + +  T ++     L+
Sbjct: 1006 AATERKSFLDAQSTDLNSAIETLE 1029


>gi|28870813|ref|NP_793432.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854062|gb|AAO57127.1| chromosome segregation SMC protein, putative [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 1162

 Score = 37.0 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|330963252|gb|EGH63512.1| chromosome segregation protein SMC [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 1162

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|325917557|ref|ZP_08179759.1| hypothetical protein XVE_3767 [Xanthomonas vesicatoria ATCC 35937]
 gi|325536234|gb|EGD08028.1| hypothetical protein XVE_3767 [Xanthomonas vesicatoria ATCC 35937]
          Length = 408

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 53/201 (26%), Gaps = 8/201 (3%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
             D      +  AE      + + +              + ++   +  +SL   L   +
Sbjct: 121 IGDALQDLVSRLAERLHAEADTVVAQAQARFQAQLQERTQALEQARHEADSLRTHLQRCE 180

Query: 319 QTLSCSRYRLD----RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
             L   R   D     +        ++             +   +  L H  +  R+ + 
Sbjct: 181 TLLQAEREAGDAARSEVASRTTELAQLQERIAGLTARLAEHERHAQSLEHKHEHAREALE 240

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT---KNRIFYLHTHIKKLITRIEFIL 431
             +  +    +Q  R    + +E    L    E      + +  L+    + + R +  L
Sbjct: 241 HYRTSVRDQREQEQRRHAHQVQELQVALRQANEALTVKNHDLMQLNRDNGQWVER-QTRL 299

Query: 432 SHKIKSCHTSVSITTRILQSF 452
             ++           R   + 
Sbjct: 300 ERELAQARQRADTQQRKRDAL 320


>gi|301049594|ref|ZP_07196546.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1]
 gi|300298639|gb|EFJ55024.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1]
          Length = 1047

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 38/153 (24%), Gaps = 12/153 (7%)

Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366
             L   D+    +  R   L + L    +                ++  +         +
Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAAL 306

Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421
              RQ I E    ++  +           K+   +           Q  +R    +  + 
Sbjct: 307 AHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366

Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
               +     S +  ++     ++   + L + 
Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399


>gi|270014943|gb|EFA11391.1| hypothetical protein TcasGA2_TC011551 [Tribolium castaneum]
          Length = 1716

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/151 (9%), Positives = 51/151 (33%), Gaps = 5/151 (3%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           + +   L +  +AL   +  L+     +    ++    L+ +  +     +++ +   S+
Sbjct: 770 EAEYEQLRNKQEALGQWESQLAEIIQWVSD-EKDARAYLQALATKMTEELDYLKHAGVSN 828

Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420
            +    +  R     + Q ++++   +L+     + +    +     +T+  +      +
Sbjct: 829 AMGGTDKNWRNR---RSQKLDKMELLNLQSSLQSEIQAKQAISEELSKTREALLEAQKDL 885

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQS 451
           +    R     +  +K     +      L S
Sbjct: 886 RDSRQR-NEAFALDLKRKEKQIKELQSRLDS 915


>gi|114627341|ref|XP_520334.2| PREDICTED: tuberous sclerosis 1 protein isoform 4 [Pan troglodytes]
 gi|114627343|ref|XP_001168992.1| PREDICTED: hamartin isoform 2 [Pan troglodytes]
 gi|114627345|ref|XP_001169011.1| PREDICTED: tuberous sclerosis 1 protein isoform 3 [Pan troglodytes]
          Length = 1163

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              V    + +  N      + ++  +  +I  L    +   N  Q L         +  
Sbjct: 748 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 807

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           EL   L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  
Sbjct: 808 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 867

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +  +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 868 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 922


>gi|191889|gb|AAA37216.1| apolipoprotein A-IV [Mus musculus castaneus]
          Length = 435

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 67/200 (33%), Gaps = 5/200 (2%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQ 319
           D              P  + +Q+++      L+  ++ L     +  N  ++ L  +   
Sbjct: 144 DQINTQTQEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTP 203

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ---HILEK 376
             +  +  +D+   +L  +L  +        NH +  +      +  +   +    I + 
Sbjct: 204 RANELKATIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVSAKIDQL 263

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           Q+++  +V+     +    +     L  L  Q + ++      ++ +       L  +++
Sbjct: 264 QKNLAPLVEDVQSKVKGNTEGLQKSLKDLNRQLEQQVEEFRRTVEPMGEMFNKALVQQLE 323

Query: 437 SCHTSVSITTRILQS-FAYK 455
                +   +  ++S  ++ 
Sbjct: 324 QFRQQLGPNSGEVESHLSFL 343


>gi|73954773|ref|XP_850708.1| PREDICTED: similar to DIX domain containing 1 isoform 2 [Canis
           familiaris]
          Length = 691

 Score = 37.0 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 23/238 (9%), Positives = 70/238 (29%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D  ++ D R  +P    E +   +   Q   
Sbjct: 231 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTYLETSWEEQLLEQQEH 290

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L       ++  + +
Sbjct: 291 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 345

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                  +   +          +  +     QQ + Q     L+      +  +    + 
Sbjct: 346 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 403

Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
            +    + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 404 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQVKLEEALRKLSEASYQQVDLER 460


>gi|330879148|gb|EGH13297.1| chromosome segregation protein SMC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 1162

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 39/146 (26%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R     +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                +   Q+     L   Q       + LR    +  E+  ++          I  + 
Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443
             I+    R+  +     ++    + 
Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330


>gi|326924668|ref|XP_003208547.1| PREDICTED: nucleoprotein TPR-like [Meleagris gallopavo]
          Length = 1998

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 4/222 (1%)

Query: 229  DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288
            DE    A     +   + + HE   +L+D            A  +++  +   Q  ++ +
Sbjct: 1116 DEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEI 1175

Query: 289  EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
               +      + + +               + L      +          +++      +
Sbjct: 1176 LRFIRRE-KEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQ 1234

Query: 349  HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408
            H   +      + LI   +  R+     +Q ++Q+  +  +         +   +    +
Sbjct: 1235 HEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADIL--PLQESNAELSE 1292

Query: 409  TKNRIFYLHTHIKKLITRIEFILSHKIKSCH-TSVSITTRIL 449
                +      +++ + R +    H +     T +    ++L
Sbjct: 1293 KSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLL 1334


>gi|241666462|ref|NP_001155898.1| hamartin isoform 3 [Homo sapiens]
          Length = 1163

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              V    + +  N      + ++  +  +I  L    +   N  Q L         +  
Sbjct: 748 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 807

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           EL   L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  
Sbjct: 808 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 867

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +  +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 868 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 922


>gi|254565347|ref|XP_002489784.1| Protein required for accurate chromosome segregation [Pichia pastoris
            GS115]
 gi|238029580|emb|CAY67503.1| Protein required for accurate chromosome segregation [Pichia pastoris
            GS115]
 gi|328350202|emb|CCA36602.1| MAP kinase kinase kinase win1 [Pichia pastoris CBS 7435]
          Length = 1416

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 25/244 (10%), Positives = 64/244 (26%), Gaps = 26/244 (10%)

Query: 256  ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315
             D        T      +   +    + + + L       +   I       ++L   + 
Sbjct: 1012 VDCVPYKNGKTFDTKPSLQDFLYAFNRLNFLQLLEFSCKELSSNIDEGKIIFSNLEAEIL 1071

Query: 316  NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI----------HN 365
            + +  L      L    +  +         K            +  L             
Sbjct: 1072 DDNPPLIREYMELQHNSQLKKEMQRDFHLVKNYSRQQARGIWYNWRLQLLKGIEESVTKK 1131

Query: 366  IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
            +Q +R+  L+ ++ +EQ+  ++              L  LR   +       T ++    
Sbjct: 1132 VQTSREANLQLKKQLEQLTMEYDEQYKNRFVVLKDKLTHLRRCKQLSEAVDKTELENFRK 1191

Query: 426  RIEFILSHKIKSCHTSVSITTRILQSFAY------KNTLKRGYTSIQDTNNNFITQKRNL 479
             +   + ++I+     +      L S         +N L           N  +  K+++
Sbjct: 1192 -LFDEVHNEIEVKQQEIKSLQSQLDSLNKDIALLNENVL---------KANKVLENKKDI 1241

Query: 480  ATKT 483
              + 
Sbjct: 1242 KEQQ 1245


>gi|195342678|ref|XP_002037927.1| GM18533 [Drosophila sechellia]
 gi|194132777|gb|EDW54345.1| GM18533 [Drosophila sechellia]
          Length = 3967

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%)

Query: 278  KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331
                   + +  +         ++ +          L +    LS          +   L
Sbjct: 2717 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2776

Query: 332  PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
                   L  I+ R       +         +  +    +    ++  ++       R  
Sbjct: 2777 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2836

Query: 392  FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
             L+ +    I  L    +Q+K          +     +   +  +  S    +S     L
Sbjct: 2837 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2896

Query: 450  QS 451
            ++
Sbjct: 2897 KT 2898


>gi|109016301|ref|XP_001109828.1| PREDICTED: involucrin [Macaca mulatta]
          Length = 496

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 57/180 (31%), Gaps = 6/180 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334
             ++     L   E +L     +  + K        LK L + +  L     ++ +L   
Sbjct: 157 EQQQGHLKHLEQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQEVQLDLPEQQVGQLKHM 216

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
            +   +  +    +    +    +    + ++++ +  +   +Q   Q+     +   L+
Sbjct: 217 EQQVEQ--LKHLEQQEEQLEQLEQQKGQLEHLEQQKGQLEHLEQQKGQVEHLEQQEGQLK 274

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452
             E+        EQ + ++      + +L   +E        ++     +    R L+  
Sbjct: 275 HLEEEKGQLKHLEQQEGQLELPEQQVGQL-KHLEQQEEQLEHLEQQKGQLEQQERQLEHL 333


>gi|268529680|ref|XP_002629966.1| Hypothetical protein CBG03693 [Caenorhabditis briggsae]
 gi|187036429|emb|CAP24529.1| hypothetical protein CBG_03693 [Caenorhabditis briggsae AF16]
          Length = 679

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 58/227 (25%), Gaps = 9/227 (3%)

Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279
           S +D    +    +          I+ +        A +  D        + +M     +
Sbjct: 455 SNDDEHPLDGPHTILHAVQCPKKFIATVAPTEVADTACFVCDSNL----VSMQMIEEDAD 510

Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339
           H+                    +   T       L  + +       ++ R+     + +
Sbjct: 511 HIHWKQTMSTTHYYATDNWKDDFYRVTPLMCRGVLRGAYKVGKDRSGKIQRVDIIRVYRV 570

Query: 340 EIIIFRKY--RHFNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV--KQHLRYIFLE 394
                       F+ +I+ +++      +  K +Q +      +   +  + + R+    
Sbjct: 571 TRHFSCWKSVPVFHRVISLVEAALPYKQMTSKQKQLLKANGNKLINRLFIQYYWRFQQSF 630

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441
              +  +        + R       + K + R+    S    +    
Sbjct: 631 LNREQVLSEYAESSKRTRAKKSWIRVVKNVARLRAATSILAAAHKNH 677


>gi|4507693|ref|NP_000359.1| hamartin isoform 1 [Homo sapiens]
 gi|9297077|sp|Q92574|TSC1_HUMAN RecName: Full=Hamartin; AltName: Full=Tuberous sclerosis 1 protein
 gi|2331281|gb|AAC51674.1| hamartin [Homo sapiens]
 gi|55665151|emb|CAH72112.1| tuberous sclerosis 1 [Homo sapiens]
 gi|119608427|gb|EAW88021.1| tuberous sclerosis 1 [Homo sapiens]
 gi|189442566|gb|AAI67824.1| Tuberous sclerosis 1 [synthetic construct]
          Length = 1164

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
              V    + +  N      + ++  +  +I  L    +   N  Q L         +  
Sbjct: 749 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 808

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
           EL   L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  
Sbjct: 809 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 868

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +  +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 869 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 923


>gi|85712484|ref|ZP_01043533.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145]
 gi|85693762|gb|EAQ31711.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145]
          Length = 581

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 54/162 (33%), Gaps = 8/162 (4%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
           + KYK     +  + L   +     S  R +   +  +   +     +Y+        ++
Sbjct: 170 ISKYKERRKETENRMLHTRENLERISDVREELGQQLQKLQRQAAAAHRYKELKAQERDLR 229

Query: 359 SDFLIHNIQK--NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           +  L     +   +Q+ L +Q+   ++     +      ++ +  L    E+ K R+   
Sbjct: 230 ALLLSSRWWQLNEKQNQLREQRSHYRLELDRWQTEQTGDEKGVISLREHAEELKQRVEQA 289

Query: 417 HTHI---KKLITRIEFIL--SHKIKSCHT-SVSITTRILQSF 452
              +      I RIE  +    +++      V+   +  +  
Sbjct: 290 QQAVYECNHQIMRIEQAMQHQRQLEQQREARVAQLKQEREQL 331


>gi|307205548|gb|EFN83853.1| Differentially expressed in FDCP 6-like protein [Harpegnathos
           saltator]
          Length = 537

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/184 (5%), Positives = 56/184 (30%), Gaps = 6/184 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRE 334
             +     +  +         +++            ++L N  ++L  + +   +    E
Sbjct: 288 EHRCIELVAEDHKGRLQWLAALQIAIQHSGEKIGYQRSLANQRRSLRQAIKQEKEETKLE 347

Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL-----R 389
           L+H  +  +  + +         +    +  ++  +  +    Q  +Q ++        +
Sbjct: 348 LQHERQARVAAEIQARKLEALSKEECAKVQQLEDVKHKLELLLQEEKQALRDEEIVRSLQ 407

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L ++ +        ++ + ++  +    +    R++     +++     +       
Sbjct: 408 ARVLREEWEKREQLEKLQEEQQKLLEMEKMKRLEFERMQQENERQLQEADLRLQQLEAER 467

Query: 450 QSFA 453
           Q+  
Sbjct: 468 QNLD 471


>gi|195391218|ref|XP_002054260.1| GJ22902 [Drosophila virilis]
 gi|194152346|gb|EDW67780.1| GJ22902 [Drosophila virilis]
          Length = 4774

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/193 (8%), Positives = 49/193 (25%), Gaps = 14/193 (7%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               +       + L    + I +  +          +  + +     S  R +      
Sbjct: 629 LHIDRVMSAKQSLELTDVESRIWLNYMDQICELFRGEIPHIKHPKMDFSDLRQKYRINHT 688

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
               +   ++  K +  + + + +     +       +   ++Q+  EQ++         
Sbjct: 689 HAPPDFSKLLQTKAKAKSPMQDAVDVPTTVQRRSVLEEERAKRQRRHEQLLNSGGVAAGA 748

Query: 394 EKKE-------KIAILHMLREQTKNR-------IFYLHTHIKKLITRIEFILSHKIKSCH 439
                      + A     R   K R       I      ++++       +S + +   
Sbjct: 749 AAASSAGSSNLQQAQSDTPRRSKKRRQADKTANIEERQQRLQEIEENRHDRMSRRRQQRF 808

Query: 440 TSVSITTRILQSF 452
                  + LQ  
Sbjct: 809 HQTQNFYKSLQLL 821


>gi|12859123|dbj|BAB31543.1| unnamed protein product [Mus musculus]
          Length = 305

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 14/189 (7%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           T  +++ V  +E     +   +     +           L +  +      Q  +  R++
Sbjct: 19  TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 78

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           L +  +     L  ++    R   H +  I   FL       RQ      Q + +     
Sbjct: 79  LGQAAQHHHWQL--LMEAMARWKAHHLGCIIKKFL------QRQAAQLLAQRLSRACFCQ 130

Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442
            R     +K++       L +     + +++           R +  L   +++    + 
Sbjct: 131 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 190

Query: 443 -SITTRILQ 450
               TR+L+
Sbjct: 191 QEGATRLLR 199


>gi|20072272|gb|AAH26390.1| Sfi1 protein [Mus musculus]
          Length = 828

 Score = 37.0 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 14/189 (7%)

Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327
           T  +++ V  +E     +   +     +           L +  +      Q  +  R++
Sbjct: 303 TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 362

Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387
           L +  +     L  ++    R   H +  I+  FL       RQ      Q + +     
Sbjct: 363 LGQAAQHHRWQL--LMEAMARWKAHHLGCIRKKFL------QRQAAQLLAQRLSRACFCQ 414

Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442
            R     +K++       L +     + +++           R +  L   +++    + 
Sbjct: 415 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 474

Query: 443 -SITTRILQ 450
               TR+L+
Sbjct: 475 QEGATRLLR 483


>gi|321399332|emb|CAM67273.2| putative kinesin [Leishmania infantum JPCM5]
          Length = 1099

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/184 (9%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            + +     + ++     A L  ++        +T     + L            RL   
Sbjct: 739 TLLLCACNGILTANSEAAAILQKMLSEREDDLRDTKRLHEEELATQA---ERFCERLKEA 795

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-----QHILEKQQHIEQIVKQ 386
             E     + ++ R       +  R++    I+ +++ R     + + ++ Q  ++ ++ 
Sbjct: 796 LDEGAVQQQQLLDRHRDAVAQLEGRLQRSHEINEMERKRNDKEKEELRQRVQLAQERMRN 855

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446
             +      + ++      R ++ + +  L    ++ + R+   L+   +S  +  +   
Sbjct: 856 EYQQEIERLRARVEGDIGDRHKSGDAVRQLQEMHEREMERLRDELNLLKRSKDSDCARLH 915

Query: 447 RILQ 450
             L+
Sbjct: 916 NQLE 919


>gi|320170685|gb|EFW47584.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 854

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 77/248 (31%), Gaps = 13/248 (5%)

Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGH------ETDWTLADYAADLRAPTPTGAAEMAVP 276
           ++ H   E I  A++   + +   +G       E++  L +  A       T    +   
Sbjct: 266 EIQHLIREGIADALSQQGLAMADQLGMLQTTLLESNKALREETAVAATQAQTSLMHIGAK 325

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-DRLPREL 335
             E  +S     E         +     +       ++      ++     +  R+ +  
Sbjct: 326 HAELERSIQSMFEQSSTVTRAAIQAMAASQKAEQEASVSMLRCLVAELGQEMGARMQQID 385

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI--HNIQKNRQHILEKQQHIEQIVKQHL----R 389
              L   I         + +   ++ L    +I +    I E Q+ +             
Sbjct: 386 TRPLIQGISDMLAELQALGSAKHAEKLQLDSSISQLHSAIAELQRELLARSPDFDTGALN 445

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
              L  +  I  +         R   L  ++++ +T ++   + +++   T+V      L
Sbjct: 446 QTTLALRADIQAIASSNRDASLRFESLSANLQRAVTELQQDSTTRVQQLETAVEALQHKL 505

Query: 450 QSFAYKNT 457
           ++ + ++T
Sbjct: 506 ETLSSEHT 513


>gi|331661170|ref|ZP_08362102.1| putative membrane protein [Escherichia coli TA206]
 gi|315300041|gb|EFU59279.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|331052212|gb|EGI24251.1| putative membrane protein [Escherichia coli TA206]
          Length = 585

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 407 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 466

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585


>gi|256827567|ref|YP_003151526.1| single stranded DNA-binding protein [Cryptobacterium curtum DSM
           15641]
 gi|256583710|gb|ACU94844.1| single stranded DNA-binding protein [Cryptobacterium curtum DSM
           15641]
          Length = 147

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 64  IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP----GSSKYQIIIESLI 109
           ID  ++      +     +G +  + GK+  + +       SK ++I++ + 
Sbjct: 53  IDCTMFGARAQSVANFLHKGSKVAIEGKLRWSQWERDGQKRSKIEVIVDEIE 104


>gi|118431127|ref|NP_147369.2| hypothetical protein APE_0620.1 [Aeropyrum pernix K1]
 gi|116062451|dbj|BAA79590.2| hypothetical protein [Aeropyrum pernix K1]
          Length = 1950

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 3/40 (7%)

Query: 85  EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124
           E    G IT +     Y I    +   G G L   +E  +
Sbjct: 686 EVWERGSITLYVPRGDYTI---EVELPGLGKLYREVEVLQ 722


>gi|73954771|ref|XP_862105.1| PREDICTED: similar to DIX domain containing 1 isoform 4 [Canis
           familiaris]
          Length = 437

 Score = 37.0 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/206 (8%), Positives = 57/206 (27%), Gaps = 11/206 (5%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
           ++ D R  +P    E +   +   Q   +  E      +I  ++  +   +         
Sbjct: 17  FSRDWRPGSPGTYLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERP 76

Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
                      ++L       ++  + +       +   +          +  +     Q
Sbjct: 77  LALCEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQ 129

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKI 435
           Q + Q     L+      +  +    +  +    + ++   +  + +    +       +
Sbjct: 130 QRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-ERLL 188

Query: 436 KSCHTSVSITTRILQSFAYKNT-LKR 460
           +     +    R L   +Y+   L+R
Sbjct: 189 QQHQVKLEEALRKLSEASYQQVDLER 214


>gi|322821100|gb|EFZ27518.1| hypothetical protein TCSYLVIO_6271 [Trypanosoma cruzi]
          Length = 789

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 23/245 (9%), Positives = 67/245 (27%), Gaps = 7/245 (2%)

Query: 215 ARGGGSIEDLWHFNDEMIV--RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272
            R  G+  D  + + E          +   + +AI         D  A +          
Sbjct: 397 IRNIGADNDNVNDSGEETANVHHKETNDDVMWAAIAGGIVDAYVDECAAVFKRLYHSTTI 456

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
                +E  Q S  NL       + R+ +        L   L  +    + +  R     
Sbjct: 457 YLREREETFQKSSQNLNMSCEERVRRMTRGMTEREQGLATQLATAQSK-AAAAQRFSDEA 515

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-I 391
                ++            H+  ++ +       ++ +      +  +E+  ++      
Sbjct: 516 YIKLEDVTSRYNEVCARVEHLEEQLAAKKRELETERRQWQETVAKLQLERAARRQGEEGR 575

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
             +   ++  L    +  + R+       + +    +      ++     +     +L++
Sbjct: 576 QEQLLRQVEELRAELQNVQARLNSAREEEQGIRRDADNK-KELLQRDIHRLER--ELLEA 632

Query: 452 FAYKN 456
              +N
Sbjct: 633 RNSQN 637


>gi|322499519|emb|CBZ34592.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 962

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%)

Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           +A+ HET     +     AD++      +    V                    + +  +
Sbjct: 97  AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                   L   +  + + L   + + +   RE       ++              ++  
Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419
            +  +    +    + Q ++  +        L  ++   +     + ++           
Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
                 R+   L   ++     +S       ++ Y+ +L 
Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311


>gi|311274768|ref|XP_003134462.1| PREDICTED: centrosome-associated protein CEP250-like [Sus scrofa]
          Length = 1594

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 4/182 (2%)

Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333
               KEHL   L   E  +  +  R+   +            + +Q     R R   L  
Sbjct: 796 LQRQKEHLTQDLKRREQEIVLLKERIQVLEDQRTLQTKILEEDLEQIKMSLRERGRDLA- 854

Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393
                ++                ++   LI   ++      ++     Q  K  L     
Sbjct: 855 SQRQLMQERAEEGKGQSKAQRGSLEHMKLILRDKEKEVECQQEHIQELQEHKAQLEQQLQ 914

Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKSCHTSVSITTRILQ 450
               K+    +L  Q +  I  L  H+++   +    E  L  +++    +++   + L+
Sbjct: 915 GLHRKMGETSLLLTQREQEIVALQRHLQEAREQGELKEQSLQGQLEEAQRALARRDQELK 974

Query: 451 SF 452
           + 
Sbjct: 975 AL 976


>gi|296233035|ref|XP_002807845.1| PREDICTED: LOW QUALITY PROTEIN: protein Hook homolog 2-like
           [Callithrix jacchus]
          Length = 720

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 5/176 (2%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE-- 336
           E       NLE +  ++     +      +            L         L  +    
Sbjct: 385 EKWLFECRNLEEKYESVTKEKERLLAERDSLREANEELRCAQLQPRGLTQADLSMDPTSP 444

Query: 337 --HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394
              NL   I         +  ++++  L      +R+   E Q+H+E+  +         
Sbjct: 445 AVDNLAAEILPAELRETLLRLQLENKRLCRQEAADRERQEELQRHLEEANRARHGLETQH 504

Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            +     L  LR Q ++    L     K    I  +L  K++     +      LQ
Sbjct: 505 -RLNQQQLSELRAQVEDLQKSLQEQGGKTEDAISILLKRKLEEHLQKLHEADLELQ 559


>gi|72389891|ref|XP_845240.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62359948|gb|AAX80373.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70801775|gb|AAZ11681.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 1271

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 28/276 (10%), Positives = 83/276 (30%), Gaps = 9/276 (3%)

Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242
             E  + I     +    ++ +   + D+         + D    +     R    + I 
Sbjct: 221 DAELMRYIDMRAEEQRERQQLKQQLKSDVEAFGTHVQELVDKTWKSHLATTRRELQAPID 280

Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302
            +     +    + D +A +   T T      + ++       ++       +++  I  
Sbjct: 281 TLVKQMAQHTEGMTDLSAKVHDCTTT--CRAELRLQTTTLQERVSAAEASAAVMLSRIDR 338

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL------EIIIFRKYRHFNHIINR 356
                +   +A   +D T++  R   +R     +  +      E  I  +      + + 
Sbjct: 339 AERKADGAQEAASRADATIAVVRDVAERAVVVSQRAMATAQRAEDAIEDRDARVAQLESH 398

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
           + +      ++ + + +    Q  E  V         + +E+        +   +R+   
Sbjct: 399 LAAVSTAEKLRADLEGVRRTAQRAESGVDALRHVYERDVQEQQNE-KRQLDALMDRVSVY 457

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
               + L T +E I  ++I      + +     ++ 
Sbjct: 458 EKQQQHLRTSLESITDNRIPQLQHRIVVLEEARETL 493


>gi|326468984|gb|EGD92993.1| hypothetical protein TESG_00553 [Trichophyton tonsurans CBS 112818]
          Length = 900

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/164 (9%), Positives = 44/164 (26%), Gaps = 15/164 (9%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
           L   + +   ++  P    +  +    E        +    ++N    L +         
Sbjct: 561 LPESSASDRVDIVSPFPTDIDMASSQWEQPRREEQHQKHGRQLNKEQELQQREDRLQNRE 620

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381
              + R D+L        +          + + N  +   L H   + +    E QQ   
Sbjct: 621 QELQQREDQL--------QNREQELQHREDQLQN--REQELQHREDQLQNREQELQQR-- 668

Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
                  +    E + +   L     + +  ++      +++  
Sbjct: 669 ---DNQPQNKEQELQHREDQLQNREREAQQELYQSQHGQQQVEH 709


>gi|222031950|emb|CAP74688.1| Uncharacterized protein yach [Escherichia coli LF82]
 gi|312944727|gb|ADR25554.1| conserved hypothetical protein [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 581

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/179 (7%), Positives = 43/179 (24%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
           AA         A  +    +    +   N      +        +   L    K      
Sbjct: 403 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 462

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
              +    R     +   +          R      +  +   +   +Q N Q+  ++  
Sbjct: 463 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 522

Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             ++I         + +++           + +     +     +  R+    + +++ 
Sbjct: 523 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 581


>gi|153827593|ref|ZP_01980260.1| GGDEF family protein [Vibrio cholerae MZO-2]
 gi|149737931|gb|EDM52836.1| GGDEF family protein [Vibrio cholerae MZO-2]
          Length = 306

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 10  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 68

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 69  -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 122

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 123 IERTQQLYQVNRQLEALS 140


>gi|23099632|ref|NP_693098.1| DNA polymerase III alpha subunit [Oceanobacillus iheyensis HTE831]
 gi|22777862|dbj|BAC14133.1| DNA polymerase III (alpha subunit) [Oceanobacillus iheyensis HTE831]
          Length = 1106

 Score = 37.0 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 44   YRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103
             R       A+ ++ D    IDA+++     +I    EEG+   + G +       + QI
Sbjct: 957  IRTKRGDRMAFLTISDEELEIDAVLFPDLFRQISNKVEEGMLLQISGVVE--DRKQRLQI 1014

Query: 104  IIESLIPSGSGTLLTA 119
            +I+S  P     L   
Sbjct: 1015 VIQSGHPFQESELERH 1030


>gi|331228833|ref|XP_003327083.1| hypothetical protein PGTG_08860 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309306073|gb|EFP82664.1| hypothetical protein PGTG_08860 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1340

 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/153 (7%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
           + +        +A  +  Q  +  R     +  +  + + E     +  H       I  
Sbjct: 112 QAQQQRSMYPFEAQTHPIQLSAMQRQVLSHQQQQFSQLSREQFAQLQATHPAQAALLIAQ 171

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
              +  ++   +     + +   +++   +  +   +          +   ++  + + +
Sbjct: 172 QQNLARVKAQAESQNLSEANTRLLLESQQKDFWQHNQRLFLPPGQAHDDPTHQQAFGNQN 231

Query: 420 IKKL-ITRIEFILSHKIKSCHTSVSITTRILQS 451
            + L   R++     +I+    S ++  + LQ+
Sbjct: 232 PQALHQQRLQMA---QIQQLQESTALQHQALQA 261


>gi|307709383|ref|ZP_07645841.1| DNA polymerase III subunit alpha [Streptococcus mitis SK564]
 gi|307619966|gb|EFN99084.1| DNA polymerase III subunit alpha [Streptococcus mitis SK564]
          Length = 1033

 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 24  LKHIVESNLSHVCVRGE-ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82
           + ++ E++ + + V  + I   R       A+  + D+  ++D  ++     ++    +E
Sbjct: 878 IGNLSENSYAIILVEVQKIKVIRTKKGENMAFLQVDDSKKKLDVTLFSDLYRQVGQEIKE 937

Query: 83  GIEFLVIGKITTFPGSSKYQIIIESLIPS 111
           G  + + GKI       + Q+I + +  +
Sbjct: 938 GAFYYIKGKIQ--SRDGRLQMIAQEIREA 964


>gi|297302998|ref|XP_002806094.1| PREDICTED: hypothetical protein LOC720414, partial [Macaca mulatta]
          Length = 182

 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 41/120 (34%), Gaps = 1/120 (0%)

Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389
              ++   +L   +          +   ++  L+   QK R    E++   ++  +   +
Sbjct: 15  EQLQDEAKHLRKEVESLVEKLQFQVENNQALSLLSKEQKERLQEQEEKLREQEERRLWEQ 74

Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
               E+KE++        + + R+      ++K   R++     +++     +      L
Sbjct: 75  ESLREQKERLRDQGERLRKQEERLRKQEERLQKQEERLQK-QEERLRKQEERLRKQEERL 133


>gi|262369109|ref|ZP_06062438.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046]
 gi|262316787|gb|EEY97825.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046]
          Length = 1198

 Score = 36.7 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 27/282 (9%), Positives = 64/282 (22%), Gaps = 53/282 (18%)

Query: 259  AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
             A+      TG  ++                      + +      +        L    
Sbjct: 838  IANQLIQQMTGLTDIKANEWLIQHDQHRQQTQSHYQQLKQHFDQLRHQFEQEKNQLEQLK 897

Query: 319  QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN--------- 369
              L  ++    ++   L+H             + +     +       +           
Sbjct: 898  AQLQQNQTSASQIENTLQHWFNAHPDFHKPDLDALAQINLAQEQHIRQKLQHAERLVNEA 957

Query: 370  -------RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422
                   ++ + E   H  +I    L+    E +  +     +R+Q K ++     ++ K
Sbjct: 958  HAALKTMQEQLSEHLGHQPEIDPAQLQQQMQEHQAALQTQLEIRDQLKLKLELHQQNVAK 1017

Query: 423  LITRIEFILSHKIKSCHTS----------------------------VSITTRILQSFAY 454
                 + I    I+                                 +    + L   + 
Sbjct: 1018 QKQFADQI--QAIQQEEHRWGKISGLMGDATGKKFRDYAQQYNLDILLEHANQQLNQLSQ 1075

Query: 455  KNTLKR-----GYTSI-QDTNNNFITQKRNLATKTRILINFF 490
            + TLKR         I  D +        +L+     L    
Sbjct: 1076 RYTLKRLDHSLSLAIIDHDMDGET-RSVASLSGGESFLTALA 1116


>gi|322824199|gb|EFZ29676.1| hypothetical protein TCSYLVIO_4057 [Trypanosoma cruzi]
          Length = 1221

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/200 (6%), Positives = 43/200 (21%), Gaps = 11/200 (5%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL------IKYKINTLNSLLKALP 315
              P         + V       +     R    I+R        K +       L+   
Sbjct: 797 KHLPNVELCILKILSVLRGFHCRVEIARQRKRMHILRRFFLCIVWKKREQRRLKCLREER 856

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-----YRHFNHIINRIKSDFLIHNIQKNR 370
              + L   R  +      ++      +  +     +       ++ +     +     R
Sbjct: 857 QGSRMLRRRREEVLDAVLRIQCAARRWLASRVRGVLWAELQRKHHQARVIQRTYRRHVGR 916

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
           + I   ++      ++ +    +                +         +      +   
Sbjct: 917 RWIRALKEEARLEEEKRMVGQIIHYSASKIQATWRMYSERRSQAEYLHFLLWERHILSSR 976

Query: 431 LSHKIKSCHTSVSITTRILQ 450
           +    ++    +    R L 
Sbjct: 977 IQRAWRAHKARLQSHWRRLH 996


>gi|308186270|ref|YP_003930401.1| Chromosome partition protein mukB [Pantoea vagans C9-1]
 gi|308056780|gb|ADO08952.1| Chromosome partition protein mukB [Pantoea vagans C9-1]
          Length = 1495

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/165 (9%), Positives = 50/165 (30%), Gaps = 6/165 (3%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                           +      L+    A    +Q L+        + R+        +
Sbjct: 442 EWQESFQAKEEEATERLLRLEQKLSVAEAAHSQFEQALALVTSIAGDVTRQDAWQTGREL 501

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            R   +  H  +++ S  L  N  + R     + + +              ++ +   L 
Sbjct: 502 LRDASNQRHHADQLSSLRLRLNELEQRLREQHEAERLLA-----EFCKRQGQQYEADALA 556

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            L+++ + +I  L++ +     +   ++  +++     ++  T  
Sbjct: 557 GLQQELEAQIEQLNSSVSDAGEQ-RMMMRQELEQLRERITSLTAR 600


>gi|220939483|emb|CAX15524.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
 gi|220941681|emb|CAX15984.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus]
          Length = 1135

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%)

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
              E     I  R  +                       R+   R  ++     +     
Sbjct: 618 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 677

Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399
            ++     + R K+  L  I      RQ      Q + +      R     +K++     
Sbjct: 678 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 737

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450
             L +     + +++           R +  L   +++    +     TR+L+
Sbjct: 738 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 790


>gi|170649606|gb|ACB21194.1| spindle assembly associated Sfi1 homolog isoform a (predicted)
           [Callicebus moloch]
          Length = 1244

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 22/228 (9%)

Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312
            T+          T +            ++ +   L+        +              
Sbjct: 716 RTICSKVLVQWRETASVQIYYRQQEDCAIREARKVLDRGCLRTWFQRWWDCSRRSAQQRL 775

Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372
            L  + Q              ++ H   +     +R    ++ +  S          RQ 
Sbjct: 776 QLERAAQHHHQQLLLEGLARWKMHHLACVRKRLLHRQSTQLLAQRLSWTCFRQW---RQQ 832

Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432
           +  ++Q  +  V+    + F  + +  A       + + +   L   ++    ++    +
Sbjct: 833 LAARRQEQQASVRALWFWAFSLQAKVWATWLAFVLERRRKKARLQQALEAYQGQLLQEGA 892

Query: 433 HKI-------------------KSCHTSVSITTRILQSFAYKNTLKRG 461
            ++                        S+    R   +   +  L RG
Sbjct: 893 TRLLHFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRG 940


>gi|154687056|ref|YP_001422217.1| DNA polymerase III DnaE [Bacillus amyloliquefaciens FZB42]
 gi|154352907|gb|ABS74986.1| DnaE [Bacillus amyloliquefaciens FZB42]
          Length = 1115

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 52   HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107
            H  + +L D    ++A+++     ++  L EEG      GK+       K Q I+ S
Sbjct: 975  HMAFLTLSDETGEMEAVVFPDQYRRLSPLLEEGALLFAAGKME--ERQEKTQFIMSS 1029


>gi|58037237|ref|NP_082021.1| coiled-coil domain-containing protein 57 [Mus musculus]
 gi|81892689|sp|Q6PHN1|CCD57_MOUSE RecName: Full=Coiled-coil domain-containing protein 57
 gi|33989766|gb|AAH56480.1| Coiled-coil domain containing 57 [Mus musculus]
 gi|123288579|emb|CAM27536.1| coiled-coil domain containing 57 [Mus musculus]
 gi|123289510|emb|CAM22544.1| coiled-coil domain containing 57 [Mus musculus]
          Length = 1016

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 60/171 (35%), Gaps = 3/171 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
             S   L   L          + +       AL  +   L  ++ +L RL  +  +NL++
Sbjct: 4   LCSERELNELLARKEEEWRVLQAHRAQLQEAALQAAQNRLEETQGKLQRLQEDFVYNLQV 63

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
           +  R      + +   ++       Q     +  +   ++Q + +  R +   + +   +
Sbjct: 64  LEERDRELERYDVEFTQARQREEAQQAEASELKIEVAKLKQDLTREARRVGELQHQHQLM 123

Query: 402 LHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHTSVSITTRIL 449
           L   R + +      ++ +        R+E+ L  K+K     +++  + L
Sbjct: 124 LQEHRLELERVHSDKNSELAHQREQNERLEWELERKLKELDGELALQRQEL 174


>gi|17221403|emb|CAD10419.2| SMC protein [Burkholderia cepacia]
          Length = 1172

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 52/385 (13%), Positives = 110/385 (28%), Gaps = 24/385 (6%)

Query: 80   PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139
            PE G   +  G + T       Q+       +G       +E   +++  + L +D+ K 
Sbjct: 629  PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685

Query: 140  PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195
                              V +   +       L++ +     Q  E   + +  I     
Sbjct: 686  AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 744

Query: 196  -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253
                 ++E R           R  G + +L   F D  +     +  +        + D 
Sbjct: 745  EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEELTAARGQARDLDR 804

Query: 254  TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311
               D  +AA   A              E  +    +LE     +     +     L   L
Sbjct: 805  AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 864

Query: 312  KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371
                  ++ L  +R  LD L  +L    E  +          +  ++       +++   
Sbjct: 865  DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 919

Query: 372  HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRI 427
             +   +Q IEQ+    +    L+ K    +     +    RI    T +  +       +
Sbjct: 920  RLNG-EQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDEL 978

Query: 428  EFILSHK--IKSCHTSVSITTRILQ 450
            +     K  + +  T ++     L+
Sbjct: 979  KAATERKSFLDAQSTDLNSAIETLE 1003


>gi|148546830|ref|YP_001266932.1| chromosome segregation protein SMC [Pseudomonas putida F1]
 gi|148510888|gb|ABQ77748.1| condensin subunit Smc [Pseudomonas putida F1]
          Length = 1162

 Score = 36.7 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 6/162 (3%)

Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357
           R  +  +  L  L + L    + L       ++         ++        +  +  ++
Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYREYKAQERQMKARLSALRWRDLDEQV 244

Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
           +    +   Q      L  +Q       + LR    E  E+   +          I  + 
Sbjct: 245 RQRESVIGDQGVSHEALVAEQRNADASIERLRDGHHELSERFNQVQGRFYSVAGDIARVE 304

Query: 418 THIKKLITRIEFILSHKIKSCHTSVS------ITTRILQSFA 453
             I+    R+  +     ++  T +           +L + +
Sbjct: 305 QSIQHGQQRLRQLQDDFKEAERTRLETESHLGHDRTLLATLS 346


>gi|297273653|ref|XP_002800650.1| PREDICTED: fas-binding factor 1-like [Macaca mulatta]
          Length = 1101

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 19/173 (10%), Positives = 48/173 (27%), Gaps = 20/173 (11%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           AR  +      + +        + L  + Q       RL  L R     +      + + 
Sbjct: 623 ARYLSHCQEAEQARAELTAQHQRRLAATAQEKDQEMQRLQELQRASILEMRRDHEEQLQR 682

Query: 350 FNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
              +             +    + +I  ++K    + E    +E       +   L  ++
Sbjct: 683 LKLLKDREVDAATSATSHTRSLNSIIQQMEKFSSSLHELSSRVEASHLTTSQERELGIRQ 742

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           +   L  L+E+   +   +                  I      ++  +R+L+
Sbjct: 743 RDEQLRALQERLGQQQRDMEEE--------RSRQQEIIGKMEARLNEQSRLLE 787


>gi|307727248|ref|YP_003910461.1| hypothetical protein BC1003_5250 [Burkholderia sp. CCGE1003]
 gi|307587773|gb|ADN61170.1| protein of unknown function DUF802 [Burkholderia sp. CCGE1003]
          Length = 922

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 21/237 (8%)

Query: 228 NDEMIVRAIANSSIPI------ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281
           ++E +    A     +          G + +  LA + A L A   +   +      E  
Sbjct: 467 DEERLAAWSAKLDTMVATLGKEWQQAGEQNEARLAAWTAKLDALATSLGEKW-QQSGEQN 525

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
           ++ L    A L+++   L +    +       L      L     RL    ++   + E 
Sbjct: 526 EARLAAWTAELDSLSTTLGETLRQSGEQNEARLAAWTAKLDSLATRLGDTWQQTGEHNEA 585

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401
            +       + +   +   +     ++N   +      ++ +            ++  A 
Sbjct: 586 RLAAWTAQLDALATSLGKTW-REAGEQNEARLATWTAKLDALAATLGEKWQQSGEQNEA- 643

Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
                     R+      +  L T +   L    +     ++  T  L +     TL
Sbjct: 644 ----------RLAAWTAELDSLSTTLGQTLQQSGEQNEARLAAWTAKLDAL--AATL 688


>gi|196012012|ref|XP_002115869.1| hypothetical protein TRIADDRAFT_30095 [Trichoplax adhaerens]
 gi|190581645|gb|EDV21721.1| hypothetical protein TRIADDRAFT_30095 [Trichoplax adhaerens]
          Length = 865

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 73/196 (37%), Gaps = 12/196 (6%)

Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
           ++  + D          E+     E  +  L  L    +  + +  K ++   ++L K L
Sbjct: 521 MSCSSKDRETMKRKKLDEVLQRQSEDERRKLQELRNGADLKLRQFRKEQLLCHHNLEKQL 580

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHI 373
              +  L+  + R D+    L+ +LEII   + +H   I + R+      H I+ + ++ 
Sbjct: 581 LQQE--LNFMQQRKDQSHETLQRHLEIINDTESKHMKVIQDLRLAQQQKQHRIEWDNENE 638

Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI------ 427
            E+Q+  EQ  KQ +      +  K      ++ Q  + +   +   K    ++      
Sbjct: 639 YERQRRNEQRKKQLIAQRQQPRNLKTQK-DRIKRQFADMVKTQNRQFKSYEKQLLQREPR 697

Query: 428 --EFILSHKIKSCHTS 441
                +S ++K     
Sbjct: 698 EKHREISKQLKEERNR 713


>gi|82544120|ref|YP_408067.1| tail length tape measure protein precursor [Shigella boydii Sb227]
 gi|81245531|gb|ABB66239.1| putative tail length tape measure protein precursor [Shigella
           boydii Sb227]
 gi|320187447|gb|EFW62137.1| Phage tail length tape-measure protein 1 [Shigella flexneri CDC
           796-83]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|78043348|ref|YP_360827.1| KID repeat-containing protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995463|gb|ABB14362.1| KID repeat protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 223

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 5/110 (4%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400
                  +  +++ + ++      ++      +   +Q ++++ +          ++++ 
Sbjct: 5   QFTQEVLKALSNLNSHLQRID--QSLFDLNTKVTNIEQRLDRVEQ-----RLENVEQRLE 57

Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
            +    ++ + R+  +   + K+  R++  +  ++      +      L 
Sbjct: 58  NVEQRLDRVEQRLDSVEKRLDKVEERLDK-VEQRLDRVEQRLDKVEERLD 106


>gi|15641229|ref|NP_230861.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121730346|ref|ZP_01682706.1| GGDEF family protein [Vibrio cholerae V52]
 gi|147674755|ref|YP_001216786.1| GGDEF family protein [Vibrio cholerae O395]
 gi|153801903|ref|ZP_01956489.1| GGDEF family protein [Vibrio cholerae MZO-3]
 gi|229505191|ref|ZP_04394701.1| GGDEF family protein [Vibrio cholerae BX 330286]
 gi|229511139|ref|ZP_04400618.1| GGDEF family protein [Vibrio cholerae B33]
 gi|229518258|ref|ZP_04407702.1| GGDEF family protein [Vibrio cholerae RC9]
 gi|229529695|ref|ZP_04419085.1| GGDEF family protein [Vibrio cholerae 12129(1)]
 gi|229608210|ref|YP_002878858.1| GGDEF family protein [Vibrio cholerae MJ-1236]
 gi|254848341|ref|ZP_05237691.1| GGDEF domain-containing protein [Vibrio cholerae MO10]
 gi|255745620|ref|ZP_05419568.1| GGDEF family protein [Vibrio cholera CIRS 101]
 gi|262159105|ref|ZP_06030217.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
 gi|262169463|ref|ZP_06037155.1| GGDEF family protein [Vibrio cholerae RC27]
 gi|298498684|ref|ZP_07008491.1| GGDEF family protein [Vibrio cholerae MAK 757]
 gi|9655696|gb|AAF94375.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121627904|gb|EAX60483.1| GGDEF family protein [Vibrio cholerae V52]
 gi|124122548|gb|EAY41291.1| GGDEF family protein [Vibrio cholerae MZO-3]
 gi|146316638|gb|ABQ21177.1| GGDEF family protein [Vibrio cholerae O395]
 gi|227013133|gb|ACP09343.1| GGDEF family protein [Vibrio cholerae O395]
 gi|229333469|gb|EEN98955.1| GGDEF family protein [Vibrio cholerae 12129(1)]
 gi|229344973|gb|EEO09947.1| GGDEF family protein [Vibrio cholerae RC9]
 gi|229351104|gb|EEO16045.1| GGDEF family protein [Vibrio cholerae B33]
 gi|229357414|gb|EEO22331.1| GGDEF family protein [Vibrio cholerae BX 330286]
 gi|229370865|gb|ACQ61288.1| GGDEF family protein [Vibrio cholerae MJ-1236]
 gi|254844046|gb|EET22460.1| GGDEF domain-containing protein [Vibrio cholerae MO10]
 gi|255736695|gb|EET92092.1| GGDEF family protein [Vibrio cholera CIRS 101]
 gi|262022276|gb|EEY40985.1| GGDEF family protein [Vibrio cholerae RC27]
 gi|262029290|gb|EEY47942.1| GGDEF family protein [Vibrio cholerae INDRE 91/1]
 gi|297543017|gb|EFH79067.1| GGDEF family protein [Vibrio cholerae MAK 757]
          Length = 372

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|262191904|ref|ZP_06050072.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae CT
           5369-93]
 gi|262032204|gb|EEY50774.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae CT
           5369-93]
          Length = 474

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%)

Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390
           N ++           + + +K   L             ++Q    KQQ + Q  +   + 
Sbjct: 42  NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 100

Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447
                          + Q +         I  L  R++     +    +      +   +
Sbjct: 101 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 160

Query: 448 IL 449
            L
Sbjct: 161 KL 162


>gi|189344715|gb|ACD92726.1| downregulated in ovarian cancer 1-like protein [Mus musculus]
          Length = 1131

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                +   L+ +E      I+ + + K      + K+    +  L     RL +L  + 
Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
             + E     K +    +   +        +  + Q  L  Q  +++   Q L     E 
Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452
           + K+A+     ++ + +   L   ++   T        +  K+ +  +      + L + 
Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328

Query: 453 A 453
           +
Sbjct: 329 S 329


>gi|160387022|sp|Q6P6L0|FIL1L_MOUSE RecName: Full=Filamin A-interacting protein 1-like; AltName:
           Full=Protein down-regulated in ovarian cancer 1 homolog;
           Short=DOC-1
          Length = 1131

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                +   L+ +E      I+ + + K      + K+    +  L     RL +L  + 
Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
             + E     K +    +   +        +  + Q  L  Q  +++   Q L     E 
Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452
           + K+A+     ++ + +   L   ++   T        +  K+ +  +      + L + 
Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328

Query: 453 A 453
           +
Sbjct: 329 S 329


>gi|153831070|ref|ZP_01983737.1| GGDEF family protein [Vibrio cholerae 623-39]
 gi|148873451|gb|EDL71586.1| GGDEF family protein [Vibrio cholerae 623-39]
          Length = 372

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|126308711|ref|XP_001377506.1| PREDICTED: similar to hCG1989313, [Monodelphis domestica]
          Length = 1163

 Score = 36.7 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 9/132 (6%)

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
           L     +L+    +    LE +  R       I N  +S      I+       ++++ +
Sbjct: 624 LETQVRKLELERTQQHILLESLQQRHQADLELIENAHRS-----RIKVLETSYQQREERL 678

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI----K 436
           ++  +          +E       L  Q + R+        + I R++ +    I    K
Sbjct: 679 QRENEDLTAQYLSHCQEAEHARAELLAQHQRRLAAAEQEKDQEIERLQNLQRASILEIRK 738

Query: 437 SCHTSVSITTRI 448
                +    R+
Sbjct: 739 DHEEQLQRLKRL 750


>gi|327483913|gb|AEA78320.1| GGDEF family protein [Vibrio cholerae LMA3894-4]
          Length = 372

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|321399575|emb|CAM68429.2| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 962

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%)

Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           +A+ HET     +     AD++      +    V                    + +  +
Sbjct: 97  AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                   L   +  + + L   + + +   RE       ++              ++  
Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419
            +  +    +    + Q ++  +        L  ++   +     + ++           
Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
                 R+   L   ++     +S       ++ Y+ +L 
Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311


>gi|304397084|ref|ZP_07378963.1| chromosome segregation and condensation protein MukB domain protein
           [Pantoea sp. aB]
 gi|304355233|gb|EFM19601.1| chromosome segregation and condensation protein MukB domain protein
           [Pantoea sp. aB]
          Length = 1495

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 6/165 (3%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343
                           +      L+    A    +Q L+        + R+        +
Sbjct: 442 EWQESFQAKEEEATERLLRLEQKLSVAEAAHSQFEQALALVTSIAGDVSRQDAWQTGREL 501

Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403
            R   +  H   ++ S  L  N  + R     + + +              +  +   L 
Sbjct: 502 LRDASNQRHHAEQLSSLRLRLNELEQRLREQHEAERLLA-----EFCKRQGQHYEADALA 556

Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            L+++ + +I  L++ +     +   ++  +++     ++  T  
Sbjct: 557 GLQQELEAQIEQLNSSVSDAGEQ-RMMMRQELEQLRERITSLTAR 600


>gi|294636171|ref|ZP_06714591.1| gifsy-1 prophage VmtH [Edwardsiella tarda ATCC 23685]
 gi|291090537|gb|EFE23098.1| gifsy-1 prophage VmtH [Edwardsiella tarda ATCC 23685]
          Length = 953

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 47/399 (11%), Positives = 104/399 (26%), Gaps = 50/399 (12%)

Query: 98  SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGA 157
            S+ Q +  SL  SG+G     + +   + +  G F+    + +      +   T  +  
Sbjct: 250 RSELQALASSL--SGNGITQGKMAEVLAQTVSSGAFTGSSVSMVANAAARLEQATGASID 307

Query: 158 VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217
              +                    Q     ++   A+  L+      T  + + I     
Sbjct: 308 ATIE--------------------QFKRLQQDPVTAVKALDEQMHFLTATQLEQITTLAS 347

Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGH-ETDWTLADYAADLRAPTPTGAAEMAVP 276
            G  ++      +    AI   +  +   +G  E  W      A     T        + 
Sbjct: 348 QGREQEAARVAMDAYATAIHTQTAGLRENLGALENAWRAVKETASGAWDTMLSIGRDVL- 406

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
               ++  +     +L      L   K  T+          ++          +L    E
Sbjct: 407 ----IRDRVEQTRRQLEEAEKNLSNLKQGTIPGFGINTGAIEKQQQLVSQLRKQLGELSE 462

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
            + +  I              +      + Q  RQ+   ++QH+  + +    Y   E K
Sbjct: 463 QSYQEAIKSAREKAERNEQERQKRQFNADQQLKRQYETAEEQHLRSLARIKNSYASKEVK 522

Query: 397 EKIAILHMLRE------------QTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSV 442
           E        R             Q  +        + K     R+E   + ++      +
Sbjct: 523 ELAIKRENERYEKSLSHGGTTRLQGDSLADSYSQRLAKTREALRLERAGAQRLTQSEQDL 582

Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481
               + L          +G +  +    + +     L  
Sbjct: 583 IALRQRLNDL-------KGRSLTKTEQ-SVVANAAVLEK 613


>gi|229521336|ref|ZP_04410755.1| GGDEF family protein [Vibrio cholerae TM 11079-80]
 gi|229341434|gb|EEO06437.1| GGDEF family protein [Vibrio cholerae TM 11079-80]
          Length = 372

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|261365297|ref|ZP_05978180.1| SMC family protein [Neisseria mucosa ATCC 25996]
 gi|288566221|gb|EFC87781.1| SMC family protein [Neisseria mucosa ATCC 25996]
          Length = 1160

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|212544926|ref|XP_002152617.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210065586|gb|EEA19680.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 1106

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 58/207 (28%), Gaps = 13/207 (6%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
            +D+         +     +E  Q     LEA+      + ++        L  AL    
Sbjct: 341 LSDIPESPQPDKEQQEESEEERQQRGETMLEAQRRQSNAQELEEMQQNRQHLRDALQEWR 400

Query: 319 QTLSCSRYRLDRLPRELEHNLEII--IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
                 R   +         +  +  + R+        +       IH ++         
Sbjct: 401 TIQDTQRGLTEEQQETRRQQMGQLSALRRRMWELGQRQH-------IHMLESQILDREWD 453

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436
           +Q +++ + Q        + +   +  ++RE+       +  H +    R        I+
Sbjct: 454 EQRLDEQLDQVQGQRESLRNQLQQLQQLMRERGLRLDEQVQEHEQLEELRRLGQQERHIE 513

Query: 437 SCHTSVSITTRILQSF-AYKNTLKRGY 462
                +      L+       T ++GY
Sbjct: 514 ---QRLRELRHQLEKIRDTLRTQRQGY 537


>gi|188492478|ref|ZP_02999748.1| gifsy-1 prophage VmtH [Escherichia coli 53638]
 gi|188494075|ref|ZP_03001345.1| gifsy-1 prophage VmtH [Escherichia coli 53638]
 gi|188487677|gb|EDU62780.1| gifsy-1 prophage VmtH [Escherichia coli 53638]
 gi|188489274|gb|EDU64377.1| gifsy-1 prophage VmtH [Escherichia coli 53638]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|301777990|ref|XP_002924415.1| PREDICTED: hamartin-like [Ailuropoda melanoleuca]
          Length = 1168

 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/173 (8%), Positives = 60/173 (34%), Gaps = 2/173 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +  Q+    L+ + + ++ +L        +   +   N  Q L         +  EL 
Sbjct: 752 SMQKEQARYSQLQEQRDTMVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIAELR 810

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  +  
Sbjct: 811 LELKKANSKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQSKHS 870

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 871 DTTKEVEMMKAACRKELEKNRSHVLQQNQRLDTSQKRILE-LESHLAKKDHLL 922


>gi|288961793|ref|YP_003452103.1| hypothetical protein AZL_c02660 [Azospirillum sp. B510]
 gi|288914073|dbj|BAI75559.1| hypothetical protein AZL_c02660 [Azospirillum sp. B510]
          Length = 829

 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/165 (9%), Positives = 39/165 (23%), Gaps = 28/165 (16%)

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
                 L   R  +    R     +             ++N  +   L   + + R    
Sbjct: 300 EWLQSRLDELRQDMTVTGRAAVEAMRSETGMVKGRDAPLVNE-EMSALNAQLAEARTAQA 358

Query: 375 EKQQHIEQIVKQHL---------------------------RYIFLEKKEKIAILHMLRE 407
             Q  + Q+                                     E + +    H    
Sbjct: 359 NAQARLRQLQSVRPGNPESLTGTDIGGDPLITGLRQRQAALNAQLAELRAQYGDRHPALN 418

Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452
           +    +  L+  +   + R+   L  +++     +   +R L++ 
Sbjct: 419 RPTAELRELNATLATELDRLVRSLRGEVEQQVAKIQDLSRRLEAL 463


>gi|281354495|gb|EFB30079.1| hypothetical protein PANDA_013744 [Ailuropoda melanoleuca]
          Length = 1167

 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/173 (8%), Positives = 60/173 (34%), Gaps = 2/173 (1%)

Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336
             +  Q+    L+ + + ++ +L        +   +   N  Q L         +  EL 
Sbjct: 753 SMQKEQARYSQLQEQRDTMVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIAELR 811

Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
             L+    +       +    +      ++Q+  + +  +   + ++ + +L  +  +  
Sbjct: 812 LELKKANSKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQSKHS 871

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449
           +    + M++   +  +    +H+ +   R++      ++   + ++    +L
Sbjct: 872 DTTKEVEMMKAACRKELEKNRSHVLQQNQRLDTSQKRILE-LESHLAKKDHLL 923


>gi|225076848|ref|ZP_03720047.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens
           NRL30031/H210]
 gi|224951834|gb|EEG33043.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens
           NRL30031/H210]
          Length = 1161

 Score = 36.7 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|332088780|gb|EGI93892.1| phage tail tape measure protein, lambda family [Shigella boydii
           5216-82]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|320179477|gb|EFW54433.1| Phage tail length tape-measure protein 1 [Shigella boydii ATCC
           9905]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|194433926|ref|ZP_03066198.1| gifsy-1 prophage VmtH [Shigella dysenteriae 1012]
 gi|194417798|gb|EDX33895.1| gifsy-1 prophage VmtH [Shigella dysenteriae 1012]
 gi|332098811|gb|EGJ03769.1| phage tail tape measure protein, lambda family [Shigella
           dysenteriae 155-74]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|168030872|ref|XP_001767946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680788|gb|EDQ67221.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 588

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINF 489
           +   ++     ++           KN LK+GY  I   +    +  + +L     +  NF
Sbjct: 148 IIRGMRDLQIKLARLEENTSINNSKNVLKQGYGIICWKDGKIALKDREDL-----LQTNF 202

Query: 490 FDGQANAIVIN 500
             G   A+V +
Sbjct: 203 GKGGMRALVQD 213


>gi|168008489|ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
            patens subsp. patens]
 gi|162691810|gb|EDQ78170.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
            patens subsp. patens]
          Length = 2486

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 43/139 (30%), Gaps = 8/139 (5%)

Query: 320  TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL----E 375
             +   + RL  L   +   +E               +         +  +RQ I      
Sbjct: 910  RIEEKKLRLLELQHRVRDEVEQQQQEIMAMGERAYRKFVRLCDRQRMDLSRQSITLQKTT 969

Query: 376  KQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYLHTHIKKLITRIEFIL 431
            +++H++ +++   + +  +   + A +   R       +    Y     +    R+E + 
Sbjct: 970  REKHLKALMQWRKKLLESQWASRDARVTRNRGVAKYHERMLREYSKRKDEDRTKRMEALK 1029

Query: 432  SHKIKSCHTSVSITTRILQ 450
            ++ + +    +      L 
Sbjct: 1030 NNDVDAYREMLKQQQGQLN 1048


>gi|154338311|ref|XP_001565380.1| actin-interacting protein-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062429|emb|CAM42290.1| actin-interacting protein-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1019

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/182 (8%), Positives = 56/182 (30%), Gaps = 11/182 (6%)

Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338
                  +    +       +   +      L   +  + +         +      +  
Sbjct: 388 ASELCDAVQAVVQEAKYTADMAALRRQHHEQLQLHIEEAQRLQRRLERAQENASFHEDQL 447

Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398
            +       +H + +        L   ++  +  +++ Q+  E + +Q  R     ++  
Sbjct: 448 RQQRQDDARQHHSEVQA------LQAQLRTAQGELVKAQEDREHLARQLRRSTE--QQTT 499

Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458
           + +L    EQ K R+  +   + ++  R + +    +++    +        + A +  L
Sbjct: 500 VEVLRSQVEQLKQRLGEVGADLAQVRGREKQL---TLQAQRERLERAKAEHDAEAAQELL 556

Query: 459 KR 460
           +R
Sbjct: 557 ER 558


>gi|24112131|ref|NP_706641.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 301]
 gi|24113227|ref|NP_707737.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 301]
 gi|30062248|ref|NP_836419.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 2457T]
 gi|24050964|gb|AAN42348.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 301]
 gi|24052226|gb|AAN43444.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 301]
 gi|30040493|gb|AAP16225.1| putative tail length tape measure protein precursor [Shigella
           flexneri 2a str. 2457T]
 gi|281601290|gb|ADA74274.1| putative tail length tape measure protein [Shigella flexneri
           2002017]
 gi|313649553|gb|EFS13983.1| phage tail tape measure protein, lambda family [Shigella flexneri
           2a str. 2457T]
 gi|332757811|gb|EGJ88139.1| phage tail tape measure protein, lambda family [Shigella flexneri
           K-671]
          Length = 1013

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%)

Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                 K L ++      +     +        L  +   +       I RI +      
Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586

Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
             ++     E +++ + I K        E    +      + Q + +I            
Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646

Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
           R+       +      +S       +   K+ L R
Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680


>gi|71420422|ref|XP_811484.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876153|gb|EAN89633.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 918

 Score = 36.7 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 8/167 (4%)

Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354
            +      K   +  L   +  + Q     +    RL  EL+    I    K + F    
Sbjct: 291 QLQNEAHDKSKQITVLTSRMQWAQQQAETLKSECSRLVEELKRFQSIHSETKKQLFEAEH 350

Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414
           ++         +++    +  K + +  + ++ LR     +         +R +  +RI 
Sbjct: 351 DKSLLQVRCARLEELEVTLRRKSEELIHMEQELLRTTGTLQSCNQETEEAVRRELSSRIA 410

Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461
            L         R       ++      ++   R L+       L RG
Sbjct: 411 DLQEMRDNAELR-RREKESQLLDAQHQLAELRRQLE-------LARG 449


>gi|293602858|ref|ZP_06685297.1| serine protease HtrA [Achromobacter piechaudii ATCC 43553]
 gi|292818652|gb|EFF77694.1| serine protease HtrA [Achromobacter piechaudii ATCC 43553]
          Length = 386

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQAN-AIVINKAPPKE 506
            I   + + +T    +     I +   DG+ + A V+   P  +
Sbjct: 115 VIVSQDGHVLTNYHVVQAADAIEVALADGRRDAAKVVGADPDTD 158


>gi|237730367|ref|ZP_04560848.1| exonuclease subunit SbcC [Citrobacter sp. 30_2]
 gi|226905906|gb|EEH91824.1| exonuclease subunit SbcC [Citrobacter sp. 30_2]
          Length = 1047

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 46/199 (23%), Gaps = 7/199 (3%)

Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317
             A L    P  A        +   +++     ++  +  RL            +A   S
Sbjct: 279 QLAALSLAQPARALRPHWERIQEQTATIERTRQKIQEVNTRLQSSLALRGCIRQQAHTQS 338

Query: 318 DQTLSCSRYRLDRLPRELEHNLEII-IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376
              L+  +   D L       L    +           +          +++N    L+ 
Sbjct: 339 TAILAEQQTLTDWLNEHDRFRLWSSELAGWKALLAQQSDASAQLRQWQQLRENDTRKLDA 398

Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-- 434
            Q     +        L +  ++  L         +I      + +L   +         
Sbjct: 399 LQLPALTLSPQEVTEALAQHVQLRPLRQRLSNLHGQIAPKQKQLAQLRASLMQRQQELTQ 458

Query: 435 ----IKSCHTSVSITTRIL 449
               +           + L
Sbjct: 459 RNAVLAEKRQRYKDKNQQL 477


>gi|194762970|ref|XP_001963607.1| GF20482 [Drosophila ananassae]
 gi|190629266|gb|EDV44683.1| GF20482 [Drosophila ananassae]
          Length = 1037

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 16/176 (9%)

Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330
            +         +    N E     + +     K     +L        Q  +    R+ +
Sbjct: 655 GDRKAYDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDTLKQHEAQEEQRMLQ 714

Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQ 386
             ++          RK     H           H  Q+ R  + +K+Q ++Q    ++K 
Sbjct: 715 AQKQYIDLEMRKFKRKRMIMQH----------EHEDQQLRDELSKKEQQLQQAHAMLLKH 764

Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHKIKSCHT 440
           H +   LE +++ ++  +  EQ   +      + K  + RI+  L   H ++    
Sbjct: 765 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELVRKHALELRQQ 820


>gi|187956882|gb|AAI58011.1| Cep110 protein [Mus musculus]
          Length = 2333

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/150 (10%), Positives = 39/150 (26%), Gaps = 2/150 (1%)

Query: 306  TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365
                    L N    L     +        +   E    +  +  + I            
Sbjct: 1891 HTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEM 1950

Query: 366  IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425
            + +  Q   E+++   +  K  L     + ++++       +Q    +      +  L  
Sbjct: 1951 MFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQE 2010

Query: 426  --RIEFILSHKIKSCHTSVSITTRILQSFA 453
              R    L   +      +S   + L + +
Sbjct: 2011 EERRTEGLERMLSQAKQQLSEREQQLMAKS 2040


>gi|119621737|gb|EAX01332.1| dystrobrevin, alpha, isoform CRA_k [Homo sapiens]
          Length = 399

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           N    L  S    +       +   +             +     F I   ++ RQ I E
Sbjct: 75  NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433
            +    +I+++  R     ++         ++       +  L     +L  R+  +   
Sbjct: 135 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 194

Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460
           + +     +    ++L++        +  +T+ R
Sbjct: 195 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 227


>gi|118091665|ref|XP_421162.2| PREDICTED: similar to kinesin-like protein [Gallus gallus]
          Length = 4627

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 6/147 (4%)

Query: 318  DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377
             Q        ++ L +E E  L+     +       ++ +++    H          E  
Sbjct: 4154 QQLYERHMRTIETLRKEREKRLQRYHRSRSLSPQKHLSLLQTVDASHRDLDLPSRRREYL 4213

Query: 378  QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHI----KKLITRIEFIL 431
            Q + + V ++ R    +++  +  + + ++    +       T I     KL  R E   
Sbjct: 4214 QQLRRDVVENTRVQEPKRRSIQYPSEIELMLRDYQKAREETKTEIARARDKLRERAEQEK 4273

Query: 432  SHKIKSCHTSVSITTRILQSFAYKNTL 458
                +     +      L++ A  +TL
Sbjct: 4274 RRIREQIFAQLQKEEARLKTLASTSTL 4300


>gi|83951312|ref|ZP_00960044.1| periplasmic serine protease, DO/DeqQ family protein [Roseovarius
           nubinhibens ISM]
 gi|83836318|gb|EAP75615.1| periplasmic serine protease, DO/DeqQ family protein [Roseovarius
           nubinhibens ISM]
          Length = 474

 Score = 36.7 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 454 YKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFD-GQANAIVINKAPPKE 506
            + T  L  G+      +   +T    + +   I+I F++ G+  A VI   P  +
Sbjct: 81  PRRTSALGSGFVI--SEDGFIVTNNHVIESADEIIIEFYEGGELKAEVIGTDPKTD 134


>gi|326917033|ref|XP_003204809.1| PREDICTED: desmoplakin-like [Meleagris gallopavo]
          Length = 2829

 Score = 36.7 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/188 (8%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 262  LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
                    A        +      + L+  +N++     K +        +AL  S++  
Sbjct: 1712 SEVDEKNSAIAELKNQLQTSNKQTLELQGLINDLQKEREKLRQEIEKFQKQALEASNRIQ 1771

Query: 322  SCSRYRLDRLPRELEHNLE-IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                     +       ++   + +       +   +        ++ N +     +Q +
Sbjct: 1772 ESKNQYNHIMQERETLLIKMSALEQDKARLQRLEEELN------RLKVNLESESRLKQRL 1825

Query: 381  EQIVKQHLRYIFLEKKE--KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438
            E   +Q L  +   K +  +        +  + +       ++  I R++  +    +  
Sbjct: 1826 ENEKQQILNDLNQWKSQHSRTEESIRKIQCEREKSEREKNTLRSEIERLQMEIKRIEERY 1885

Query: 439  HTSVSITT 446
               +  T 
Sbjct: 1886 RCRLEETA 1893


>gi|255065092|ref|ZP_05316947.1| SMC family protein [Neisseria sicca ATCC 29256]
 gi|255050513|gb|EET45977.1| SMC family protein [Neisseria sicca ATCC 29256]
          Length = 1160

 Score = 36.7 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|195433503|ref|XP_002064750.1| GK15039 [Drosophila willistoni]
 gi|194160835|gb|EDW75736.1| GK15039 [Drosophila willistoni]
          Length = 1017

 Score = 36.7 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360
           +    +   L + L N D   +      D L R      E  +             +K+ 
Sbjct: 374 QQTQRSCKDLRQELHNKDLEWTQREQERDHLQRNQLKQSEEKLLEMQMIAQERFQELKAQ 433

Query: 361 FL-----IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415
                      Q+     +  + +++Q          L+ +++I  L    ++ ++ I  
Sbjct: 434 MAVKEAETKQAQEAYHTEMNHKLNLKQEQLTSAEEKILKLQQRIQNLETQDQELRDEISR 493

Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453
                   +       + + +     V   T+ L S +
Sbjct: 494 KEKSHASELA----ASAQREEELQQRVRTLTKELSSLS 527


>gi|71422317|ref|XP_812097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876837|gb|EAN90246.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 4213

 Score = 36.7 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 12/202 (5%), Positives = 62/202 (30%), Gaps = 25/202 (12%)

Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310
           + ++   +      P  T      + ++     ++++ E            ++       
Sbjct: 310 SPFSAMAFVQYQPVPYRTDLPTSRIELRVDRLRAVLSREEWAIL----RALWREARDGEE 365

Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370
              L +     +  +   D       + +++ + R                 I  +++ R
Sbjct: 366 YDVLHHFRPVGAEKKRPTDNARAWWAYAIQVTLHR-----------------IRQVRERR 408

Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
             + EK + ++   ++++      ++ ++    +     + +       ++  +  I+  
Sbjct: 409 VFVWEKYKRLKAAREEYMTLFKRARRRQLEANWLTELTMEEKTRLQDLEMELPMESIK-- 466

Query: 431 LSHKIKSCHTSVSITTRILQSF 452
           ++ ++    T +       ++ 
Sbjct: 467 IARRLAYHRTHLER--EQREAL 486


>gi|322491912|emb|CBZ27185.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1423

 Score = 36.7 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 43/164 (26%), Gaps = 6/164 (3%)

Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356
            R  +            L    QTL+  +  L R     E   E +              
Sbjct: 576 ERTQQMHRERQQQTDAQLRQLQQTLAEQQEVLQRTRVAGESADERL------RRTEAALA 629

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                L H ++  R      Q  I+Q     +  +  + +E    L    E         
Sbjct: 630 AVEATLPHAVEGVRARFEALQGLIQQTCVLPVTRVQQDIEEAQRKLQAAEEDRIRLNSSW 689

Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460
              + +     E    H  +     ++    + +    + TL+R
Sbjct: 690 TQQLAEARQYHEERARHTREVLEQRLAHHKELYEELRTQQTLQR 733


>gi|294670151|ref|ZP_06735076.1| transcriptional regulator, GntR family [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308078|gb|EFE49321.1| transcriptional regulator, GntR family [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 1161

 Score = 36.7 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQAQQQSVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|295424207|ref|NP_001035487.2| filamin A-interacting protein 1-like isoform 1 [Mus musculus]
          Length = 1131

 Score = 36.7 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
                +   L+ +E      I+ + + K      + K+    +  L     RL +L  + 
Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208

Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395
             + E     K +    +   +        +  + Q  L  Q  +++   Q L     E 
Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268

Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452
           + K+A+     ++ + +   L   ++   T        +  K+ +  +      + L + 
Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328

Query: 453 A 453
           +
Sbjct: 329 S 329


>gi|169796920|ref|YP_001714713.1| ATP-dependent dsDNA exonuclease (suppression of recBC)
           [Acinetobacter baumannii AYE]
 gi|213156677|ref|YP_002318338.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057]
 gi|215484382|ref|YP_002326613.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294]
 gi|301345280|ref|ZP_07226021.1| Exonuclease sbcC [Acinetobacter baumannii AB056]
 gi|301595731|ref|ZP_07240739.1| Exonuclease sbcC [Acinetobacter baumannii AB059]
 gi|332853755|ref|ZP_08434967.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150]
 gi|332871125|ref|ZP_08439723.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113]
 gi|169149847|emb|CAM87738.1| ATP-dependent dsDNA exonuclease (Suppression of recBC)
           [Acinetobacter baumannii AYE]
 gi|213055837|gb|ACJ40739.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057]
 gi|213988948|gb|ACJ59247.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294]
 gi|332728441|gb|EGJ59816.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150]
 gi|332731711|gb|EGJ62992.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113]
          Length = 1198

 Score = 36.7 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 4/203 (1%)

Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319
           A  +A + T     A+      Q       ++      + +K    +L  + K +   DQ
Sbjct: 764 AWQQASSQTAKQTWAILDARAKQLEQQEQLSQRFEQQQQELKMLTASLEQMTKQIDEIDQ 823

Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQ 377
            L     +  +   +    ++ +  R     +   I +  K         + +Q   + +
Sbjct: 824 NLQEITLKGQQNNEKAVSLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTR 883

Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
           QH EQ  +   +      +        L  Q +N +          +T +  I S + + 
Sbjct: 884 QHFEQQKQALDQLKHQY-QHTEQHQQQLDGQIQNWLKDHTDFQASDLTALIQINSAQEQD 942

Query: 438 CHTSVSITTRIL-QSFAYKNTLK 459
               ++   R+L ++ +   T++
Sbjct: 943 IRNRLNHAERLLSEASSALKTMQ 965


>gi|322388178|ref|ZP_08061782.1| DNA-directed DNA polymerase III alpha subunit [Streptococcus
           infantis ATCC 700779]
 gi|321140850|gb|EFX36351.1| DNA-directed DNA polymerase III alpha subunit [Streptococcus
           infantis ATCC 700779]
          Length = 1033

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 14/102 (13%)

Query: 13  PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRG-IHSSG--HAYFSLKDNHSRIDAIIW 69
           P  S+SELS       E   + V V  EI   R      G   A+  + D+ + ++  ++
Sbjct: 874 PIVSLSELS-------EGQTATVLV--EIQSIRVIRTKKGENMAFLKVTDSKTSLEVTVF 924

Query: 70  KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111
                + + L  EG  + + GK+       + Q+++ +L  +
Sbjct: 925 SEQYRQFKNLLHEGSFYYLNGKVQ--ARDGRLQLVLNNLKEA 964


>gi|296203220|ref|XP_002806923.1| PREDICTED: LOW QUALITY PROTEIN: fas-binding factor 1-like
           [Callithrix jacchus]
          Length = 1172

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 50/173 (28%), Gaps = 20/173 (11%)

Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349
           AR  +      + +        + L  + Q       RL  L R     +      + + 
Sbjct: 694 ARYLSHCQEAEQARAELTAQYQRRLAAAAQEKDQEMERLRELQRASILEMRRDHEEQLQR 753

Query: 350 FNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397
              +             +    + +IH ++K    + E    +E     + +   L  ++
Sbjct: 754 LKLLKDREVDAATSTTSHTWSLNSIIHQMEKFSSSLQELSYRMEASHLTNSQERELGIRQ 813

Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
           +   L  L+E+   +   +                  I      +S  +++L+
Sbjct: 814 RDEQLRALQERLGQQQRDMEEERSWQQE--------VIGKMEARLSEQSQLLE 858


>gi|149724128|ref|XP_001504248.1| PREDICTED: myosin XVIIIA isoform 3 [Equus caballus]
          Length = 1581

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%)

Query: 255  LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314
            + D+  +        A       +     +      +   + I  +  +I+ +     AL
Sbjct: 1213 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272

Query: 315  PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373
                  L   +  +     E + ++  ++ +           +     L   +++  +  
Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1332

Query: 374  LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429
             E Q+ ++ +  +       +  K  ++       + + R+ +  T    ++ L +R++ 
Sbjct: 1333 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392

Query: 430  ILSHKIKSCHTSVSI 444
             +    +     ++ 
Sbjct: 1393 NMEKLTEERDQRIAA 1407


>gi|119491437|ref|ZP_01623456.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106]
 gi|119453432|gb|EAW34595.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106]
          Length = 688

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 61/178 (34%), Gaps = 8/178 (4%)

Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324
           P                        +   + + + +      ++     L  +   LS  
Sbjct: 348 PNREEVESWLGKAGVADVEETAIRMSTQVDEMEKRVPEFWQKVDQQQANLNQNRTELSRI 407

Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384
             +LD L ++L +  +  I    +  + +  +I +  L      N+Q I   Q  + Q+ 
Sbjct: 408 ETQLDDLKKKLRNYPDEDIQELQKRLDEVETKINN--LNRETGSNQQQIENTQSSVSQLE 465

Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
           +Q  +    E K+ +A      ++   +     T + ++  R++     +++S   ++
Sbjct: 466 RQIDKLKMNEMKQVLA------QRRIEKTQDAITRLTQVKDRLDQQFRSQLESRVQNI 517


>gi|73954769|ref|XP_862078.1| PREDICTED: similar to DIX domain containing 1 isoform 3 [Canis
           familiaris]
          Length = 683

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/238 (9%), Positives = 70/238 (29%), Gaps = 13/238 (5%)

Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285
           ++ +I ++   +   II + G E      D  ++ D R  +P    E +   +   Q   
Sbjct: 231 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTYLETSWEEQLLEQQEH 290

Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345
           +  E      +I  ++  +   +                    ++L       ++  + +
Sbjct: 291 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 345

Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405
                  +   +          +  +     QQ + Q     L+      +  +    + 
Sbjct: 346 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 403

Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460
            +    + ++   +  + +    +       ++     +    R L   +Y+   L+R
Sbjct: 404 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQVKLEEALRKLSEASYQQVDLER 460


>gi|47216359|emb|CAG02417.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1342

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/183 (8%), Positives = 50/183 (27%), Gaps = 4/183 (2%)

Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331
            ++   +      + +            ++        L + L  ++Q L  +  + + L
Sbjct: 285 YLSAQRESTTVHDINDKLENELANKEAFLRQMEEKNRQLQERLELAEQKLQQTMRKAETL 344

Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391
           P       + I         H     +   L   +++  Q +L              R+ 
Sbjct: 345 PEVEAELAQRIAALTKAEERHGSIEERMRHLECQLEEKNQELLRVSH--GGGGSTVSRFG 402

Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHI-KKLITRIEFILSHKIKSCHTSVS-ITTRIL 449
              K+  +A    L  +  +        + ++   R+   +   +   +  +       +
Sbjct: 403 SSRKRRTLASSTWLLTRLSDPQARQREKMNEEHNKRLSDTVDRLLNESNERLQLHLKERM 462

Query: 450 QSF 452
            + 
Sbjct: 463 AAL 465


>gi|326666190|ref|XP_003198208.1| PREDICTED: tripartite motif-containing protein 16 isoform 1 [Danio
           rerio]
          Length = 548

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 52/202 (25%), Gaps = 8/202 (3%)

Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNSLLKAL 314
           D   D    T   A +  +   E    +        ++     +             K  
Sbjct: 93  DVQCDACTGTKYKAIKSCLQCLESYCQTHFERHEEFHSRKPHKVIDATGRLQDMICPKHE 152

Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374
              +      +  +  L +E EH     +    +         ++   +    + RQ  L
Sbjct: 153 KELEVYCITDQQCICELCKEYEHKNHATVSAVAQRTEKQKELKETLVKLQERLQQRQKDL 212

Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434
              Q +   V+ H +      ++   I   L    + R   L   I+     I       
Sbjct: 213 ---QQLRAAVESHKQSAQTAVEDTERIFTELICSIEKRRSELTQMIRDQEKTIRSRAERH 269

Query: 435 IKSCHTSVSITTRI---LQSFA 453
           ++     +    R    L+  +
Sbjct: 270 MEQLEQEIEDLRRRNTELEQLS 291


>gi|159127797|gb|EDP52912.1| cohesin complex subunit (Psm1), putative [Aspergillus fumigatus
           A1163]
          Length = 1289

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 55/171 (32%), Gaps = 3/171 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
               +         + R +K K   L+ + + L +        +  L+ L + +  + E 
Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELDFVKRQLEDLRPKYMERQEALEELDQTIAQSQES 801

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399
           +   +   +     R+    +     +      E  Q   +   Q  R       +++++
Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEVQQGSLQEEAAQKKLEFTTQKSRIENQLSFERQRL 861

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
              +      + +     + IK+L    +  + +++   +  + +    LQ
Sbjct: 862 QATNDRIASLQAQHGRDQSLIKELKAE-QEQIRNQLDEYNAELDVLRERLQ 911


>gi|145534185|ref|XP_001452837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420536|emb|CAK85440.1| unnamed protein product [Paramecium tetraurelia]
          Length = 579

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 67/185 (36%), Gaps = 7/185 (3%)

Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335
              +  +  +  LE    +        K   +   LK      Q L  SR RL+ L +  
Sbjct: 289 EELKRSREKIEQLEELRQSRERLQDLKKSREVQEALKNSGEKIQDLQKSRERLEELKKSR 348

Query: 336 EHNLE----IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH---IEQIVKQHL 388
           E   +        ++      +    +    I  ++K+R+ + + ++    ++Q+ ++  
Sbjct: 349 ERLNQLEELRKSRQQMEELEELKKSRERQAQIDELKKSRERLEDLRKSRETLQQLEQERK 408

Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448
            +  +++++K        ++ + RI  L T+ + L  + +      +K     +S   + 
Sbjct: 409 NHEKIDEQKKSRERIEELQKQRKRIEELRTYQEALEFQKKEREELDLKRSQERLSELKKS 468

Query: 449 LQSFA 453
            +   
Sbjct: 469 RERLD 473


>gi|153212272|ref|ZP_01948060.1| GGDEF family protein [Vibrio cholerae 1587]
 gi|124116650|gb|EAY35470.1| GGDEF family protein [Vibrio cholerae 1587]
          Length = 372

 Score = 36.7 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%)

Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375
           + ++ +   R  +  +        ++      +    +I+ +    L  +    RQ I  
Sbjct: 76  HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134

Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435
                 +           E++EK A    L          +    ++L+  +   L  K+
Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188

Query: 436 KSCHTSVSITTRILQSFA 453
                 +    R L++ +
Sbjct: 189 IERTQQLYQVNRQLEALS 206


>gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 427

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 49/152 (32%), Gaps = 2/152 (1%)

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359
            +    +++     L    +TL     ++  L  +++  L  +          + + ++ 
Sbjct: 96  REQLQQSVDQSQAELRQQAETLEAHLLQIASLQEDID-ALRRLREDLESQVGRLASELEE 154

Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419
                   ++R   LE +    Q      +     ++ +I  L    E+    +    + 
Sbjct: 155 SQASAGQLRDRSRALEARLAETQETTLLAQREIEAREIRIQDLAAGIEERDRALVEERSL 214

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451
                 R++  L  +++     ++     L++
Sbjct: 215 TADAQARVD-ALRRQMQDLEQQLARLNETLRA 245


>gi|170043308|ref|XP_001849335.1| structural maintenance of chromosomes protein 6 [Culex
           quinquefasciatus]
 gi|167866691|gb|EDS30074.1| structural maintenance of chromosomes protein 6 [Culex
           quinquefasciatus]
          Length = 1121

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 60/182 (32%), Gaps = 3/182 (1%)

Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332
           +A     +LQ ++  L+     ++ RL          + +      +     + +  +L 
Sbjct: 700 LAKKPARYLQVNMGELKKETQRLLERLEHELRQLNQKIEQETREHGEKQRALQEKQKQLS 759

Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392
           ++      + +             ++   L + + + +    + +Q +EQ  ++   ++ 
Sbjct: 760 KQQIELNGLELKINQLKAIEYPAELEDVTLQNELAELKASQAQLKQELEQENEKIQTFMS 819

Query: 393 --LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
               ++  I          +  I  L   I +   + +  +    K+ H  +S     L+
Sbjct: 820 EIQAQERNIQEKKDNMGVIEREIQQLQDKIDEEQQK-KHDMQANAKTKHQQLSRLQEELK 878

Query: 451 SF 452
           + 
Sbjct: 879 AL 880


>gi|148693806|gb|EDL25753.1| DIX domain containing 1, isoform CRA_b [Mus musculus]
          Length = 713

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 15/185 (8%)

Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP-----RELEHN 338
               LEA     ++   ++    +    K +      L       D         E   N
Sbjct: 282 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 341

Query: 339 LEIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396
            E  +       +     N+   D L   + +    +L+ +Q + +              
Sbjct: 342 PEEQLIIIRSRLDQSVEENQDLKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVD 401

Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456
            +  +    R   + ++            R+        +     +    R L   +Y+ 
Sbjct: 402 LQRKLEERNRLLGEYKVRNALQKELGQKDRL-------FQQQQAKLEEALRKLSDASYQQ 454

Query: 457 T-LKR 460
             L+R
Sbjct: 455 VDLER 459


>gi|146088120|ref|XP_001465995.1| hypothetical protein [Leishmania infantum JPCM5]
          Length = 963

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%)

Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301
           +A+ HET     +     AD++      +    V                    + +  +
Sbjct: 97  AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156

Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361
                   L   +  + + L   + + +   RE       ++              ++  
Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216

Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419
            +  +    +    + Q ++  +        L  ++   +     + ++           
Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276

Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459
                 R+   L   ++     +S       ++ Y+ +L 
Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311


>gi|119907034|ref|XP_615064.3| PREDICTED: DIX domain containing 1 [Bos taurus]
          Length = 731

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 60/201 (29%), Gaps = 7/201 (3%)

Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320
           D R  +P    E +   +   Q   +  E      +I  ++  +   +            
Sbjct: 314 DWRPGSPRTYLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLAL 373

Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380
                   ++L        + I   +      +  + ++  L       +Q + ++   +
Sbjct: 374 CEPGVNPEEQLIIIQSRLDQSIEENQDLKKELLKYKQEARNLQGIKDALQQRLTQQDASV 433

Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440
            Q+ ++ LR    + +     LH      + ++   +  + +    +       +     
Sbjct: 434 LQLKQELLRANMDKDE-----LHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLLLQNQA 487

Query: 441 SVSITTRILQSFAYKNT-LKR 460
            +    R L   +Y+   L+R
Sbjct: 488 KLEEALRKLSEASYQQVDLER 508


>gi|115401012|ref|XP_001216094.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114190035|gb|EAU31735.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 278

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 49/175 (28%), Gaps = 37/175 (21%)

Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR--IFYLHTHI 420
           IH      + + +   H+ +  +   R    EK   I+ +    E  + R  I       
Sbjct: 52  IHMNATKWKSLTQFAAHLGR--EGLCRVEETEKGLFISYIDRSPETLRRREAIMKKERQD 109

Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN-TLKRGYTSIQDTNNNFITQKRNL 479
           +    R + ++  +++             +    +   L+R                   
Sbjct: 110 RGDEEREQRLIQEQVERAQQRKDPAEE--EEVDPEAKILQR------------------- 148

Query: 480 ATKTRILINFF---------DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ 525
               ++ +N           +G+A A   +K+P  E             E   TQ
Sbjct: 149 KEGEKVKLNLGFGKKTEGQPEGEAKAESKSKSP--EASAAPGATPEAASETPPTQ 201


>gi|149210881|ref|XP_001522815.1| hypothetical protein MGCH7_ch7g913 [Magnaporthe oryzae 70-15]
 gi|86196868|gb|EAQ71506.1| hypothetical protein MGCH7_ch7g913 [Magnaporthe oryzae 70-15]
          Length = 419

 Score = 36.7 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 5/141 (3%)

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
              R     +   ++  +  + Q  +R       + +   R+      ++++ H      
Sbjct: 109 HDDRSAGPHQGSNLSNFYASQRQQPSRGTNEAEQMMQAKRRMAAQRERELRNYHQEQQYN 168

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
              +       TL  G    +D     I ++R+          F DG     V      +
Sbjct: 169 RTSISDVRPDRTLSPGSNMSEDERRELIARQRSALYGEG---QFADG--GGYVDETGAVR 223

Query: 506 EQPTKKCQLHNNKREKQGTQG 526
                + Q  +         G
Sbjct: 224 PGMPGQPQHPSQTIAPPPMGG 244


>gi|224825444|ref|ZP_03698549.1| SMC domain protein [Lutiella nitroferrum 2002]
 gi|224602365|gb|EEG08543.1| SMC domain protein [Lutiella nitroferrum 2002]
          Length = 1140

 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 20/197 (10%), Positives = 55/197 (27%), Gaps = 4/197 (2%)

Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318
             D    +    A  A       + S    E        + ++       +    L + +
Sbjct: 351 VQDELQASQAWLARHAHFAGLGEKLSGWQSEYGQIQQAQQAVQQLQTQQQAQQGELADIE 410

Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378
             L+     L +     E +         R    ++       L  + Q+ ++ +   +Q
Sbjct: 411 TRLARQVQALQQATARHEQS-RQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQ 469

Query: 379 HIEQIVKQHLRYIFLEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437
             +Q  +         ++E  +A  H    + +  +  L    ++L  +++     K+  
Sbjct: 470 LAQQATQLRQLAAQRVQQETSLADTHQQLAEQQTGLDALRRDYRQLKEQVDD--KRKLLL 527

Query: 438 CHTSVSITTRILQSFAY 454
               +        +   
Sbjct: 528 QEQRIQSLEAHRAALQP 544


>gi|145609634|ref|XP_367033.2| hypothetical protein MGG_03109 [Magnaporthe oryzae 70-15]
 gi|145017037|gb|EDK01400.1| hypothetical protein MGG_03109 [Magnaporthe oryzae 70-15]
          Length = 395

 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 5/141 (3%)

Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445
              R     +   ++  +  + Q  +R       + +   R+      ++++ H      
Sbjct: 85  HDDRSAGPHQGSNLSNFYASQRQQPSRGTNEAEQMMQAKRRMAAQRERELRNYHQEQQYN 144

Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505
              +       TL  G    +D     I ++R+          F DG     V      +
Sbjct: 145 RTSISDVRPDRTLSPGSNMSEDERRELIARQRSALYGEG---QFADG--GGYVDETGAVR 199

Query: 506 EQPTKKCQLHNNKREKQGTQG 526
                + Q  +         G
Sbjct: 200 PGMPGQPQHPSQTIAPPPMGG 220


>gi|26332288|dbj|BAC29874.1| unnamed protein product [Mus musculus]
          Length = 585

 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%)

Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342
                +E        RL            K L      L   +       ++ +  L+  
Sbjct: 265 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 324

Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402
           + +  +     +  I+ + L +  Q  R       +  E+ +++  + +  + K++    
Sbjct: 325 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 381

Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
            M R Q   R       +++   R+   L ++       +
Sbjct: 382 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 421


>gi|71000142|ref|XP_754788.1| cohesin complex subunit  (Psm1) [Aspergillus fumigatus Af293]
 gi|66852425|gb|EAL92750.1| cohesin complex subunit  (Psm1), putative [Aspergillus fumigatus
           Af293]
          Length = 1289

 Score = 36.7 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 55/171 (32%), Gaps = 3/171 (1%)

Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341
               +         + R +K K   L+ + + L +        +  L+ L + +  + E 
Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELDFVKRQLEDLRPKYMERQEALEELDQTIAQSQES 801

Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399
           +   +   +     R+    +     +      E  Q   +   Q  R       +++++
Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEVQQGSLQEEAAQKKLEFTTQKSRIENQLSFERQRL 861

Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450
              +      + +     + IK+L    +  + +++   +  + +    LQ
Sbjct: 862 QATNDRIASLQAQHGRDQSLIKELKAE-QEQIRNQLDEYNAELDVLRERLQ 911


>gi|325143894|gb|EGC66206.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240013]
          Length = 1161

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|319897025|ref|YP_004135220.1| cell division protein mukb [Haemophilus influenzae F3031]
 gi|317432529|emb|CBY80889.1| cell division protein MukB [Haemophilus influenzae F3031]
          Length = 1510

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 50/158 (31%), Gaps = 9/158 (5%)

Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN---LEIIIFRKYRHFNHIINR 356
            K +      L   L   +Q  +  +  +  L    +     L+     +  H       
Sbjct: 548 QKLQAQQTPQLRTKLHELEQRYAQQQSAVKLLNDFNQRANLSLQTAEELEDYHAEQEALI 607

Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416
                 +    +NR  + +K++++  +  ++ R        + A L  L +Q+  R    
Sbjct: 608 EDISARLSEQVENRSTLRQKRENLTALYDENARKAPAWLTAQAA-LERLEQQSGERFENS 666

Query: 417 HTHIKKLITRI----EFILSH-KIKSCHTSVSITTRIL 449
              +  + +++    E  +   +++     +      L
Sbjct: 667 QDVMNFMQSQLVKERELTMQRDQLEQKRLQLDEQISRL 704


>gi|308388730|gb|ADO31050.1| hypothetical protein NMBB_0592 [Neisseria meningitidis alpha710]
          Length = 1161

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%)

Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358
               K+       +   +    L+  +  LD    +           +++      +   
Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262

Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418
           +     N + +     E+ Q        + R +  E+  ++      ++    RI     
Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322

Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448
             +  + RI       +++     +    + 
Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353


>gi|213626315|gb|AAI71335.1| hgs protein [Xenopus (Silurana) tropicalis]
          Length = 750

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 7/155 (4%)

Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362
                 +      +     +        L R   + +             +   I +   
Sbjct: 370 MEQQYQNGESEENHEQFLKALQNAVTTFLNRMKSNQMRGRSITNDSAVLSLFQSINNMHP 429

Query: 363 I-----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417
                 + + + R +    Q  + QI         L  + +  +     E  + R   L 
Sbjct: 430 QLLEMLNQLDERRLYYEGLQDKLAQIRDARGALNALRDEHREKLRRAAEEAERQRQIQLA 489

Query: 418 THIKKLITRIEFI--LSHKIKSCHTSVSITTRILQ 450
             ++ +  + +    +  ++           R L+
Sbjct: 490 QKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQLR 524


>gi|126290827|ref|XP_001370458.1| PREDICTED: similar to protein kinase isoform 1 [Monodelphis
           domestica]
          Length = 982

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 53/162 (32%), Gaps = 9/162 (5%)

Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348
           + R        +K K   + + ++ LP   +     R +++   ++ +   +  + ++  
Sbjct: 660 QDREYTKFQEQLKMKKKEVKNEVEKLPRQQRK-ESMRQKMEEHTQQKQLLDKEFVAKQKG 718

Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI------- 401
                +  I ++       K R+ + +KQ+ +               +E+  +       
Sbjct: 719 DLELAMKTITAENRREICDKERECLNKKQELLRDREASLWELEEHHLQERHQLVKQQLKD 778

Query: 402 -LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442
              + R +   +       +++   R+   L  + +     +
Sbjct: 779 QYFLQRHELLRKHEKEREQMQRYNQRMIEQLKIRQQQEKARL 820


>gi|71661404|ref|XP_817723.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70882933|gb|EAN95872.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 748

 Score = 36.7 bits (83), Expect = 10.0,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 48/200 (24%), Gaps = 11/200 (5%)

Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321
              P         + V       +     R    I+R    +I       + L    +  
Sbjct: 289 KHLPNMELCILKILAVLRGFHCRVEIAWQRKRMHILRRFFLRIVWKKREQRRLKCLREEW 348

Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK---NRQHILEKQQ 378
             SR    R    L+  L I    +    + + + + ++F   + Q     R +     +
Sbjct: 349 QGSRMLRRRREEVLDAVLRIQCAARRWLASRVRSVLWAEFQRKHHQACVIQRTYRRHVGR 408

Query: 379 HIEQIVKQHLRY--------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430
              + +K+  R           +                +         +      +   
Sbjct: 409 RWIRALKEEARLEEEKRMVGQIIHYSASKIQATWRMYSERRSQAEYLRFLLWERHILSSR 468

Query: 431 LSHKIKSCHTSVSITTRILQ 450
           +    ++    +    R L 
Sbjct: 469 IQRAWRAHRARLQSHWRRLH 488


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.127    0.342 

Lambda     K      H
   0.267   0.0389    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,471,089,579
Number of Sequences: 14124377
Number of extensions: 184681094
Number of successful extensions: 778264
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 5007
Number of HSP's successfully gapped in prelim test: 5796
Number of HSP's that attempted gapping in prelim test: 745009
Number of HSP's gapped (non-prelim): 26906
length of query: 529
length of database: 4,842,793,630
effective HSP length: 144
effective length of query: 385
effective length of database: 2,808,883,342
effective search space: 1081420086670
effective search space used: 1081420086670
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 83 (36.7 bits)