HHsearch alignment for GI: 254780793 and conserved domain: KOG1347

Probab=99.47  E-value=3e-13  Score=86.45  Aligned_cols=229  Identities=15%  Similarity=0.172  Sum_probs=176.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             324100013468887643201202333202556-556630577775332110-000001112322100234444332236
Q gi|254780793|r  227 THNVKFFLKLTFPLMVTGGIIQISNIVGRAIAS-RETGIISAIQYAERIYSL-PVGVIGGAMMIVILPALSRSLRSKNKQ  304 (518)
Q Consensus       227 ~~~~k~~l~~~~p~~l~~~~~~i~~~i~~~~as-~~~g~vs~~~~a~~l~~l-~~~i~~~ai~~~~~P~ls~~~~~~d~~  304 (518)
T Consensus        24 ~~e~k~l~~ia~P~i~~~~~~~~~~~is~~f~GhlG~leLaa~sla~s~~n~~~~s~~-~gl~~aletlcgQa~ga~~~~  102 (473)
T KOG1347          24 VTESKELARLALPAILTFLAQPLLSLVSTAFAGHLGNLELASVSLANSFANITGVSIL-LGLQLALDTLCGQAFGAKKFT  102 (473)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH-HCCHHHHCCCCHHHCCCCHHH
T ss_conf             8999999986131999999988777888864016674023346666532244340234-241031302104541862122


Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             78999897541134421589999985257231112104786445545666655542010567753123202354433101
Q gi|254780793|r  305 KSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQNDMK  384 (518)
Q Consensus       305 ~~~~~~~~~~~~~~~i~~p~~~~l~~~~~~ii~llf~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~~~  384 (518)
T Consensus       103 ~lg~~lqrs~~~l~~~~~~~~~l~-~~~~~il~~lgq----~~~i~~~a~~y~~~~ip~~~a~~~~~~l~~~lq~Q~~~~  177 (473)
T KOG1347         103 ALGVYLQRSGIVLLVQGLPISLLI-LNSEPILLLLGQ----DPDISRDAGSYAFMLIPGLFSYAVSFPLAKFLQAQSITL  177 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHCC----CHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             338899999999987654568699-701989987279----846667741301355034441133338999976538852


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHH
Q ss_conf             34677788868999998752021--12004999999999999999999999711------57889889999999999999
Q gi|254780793|r  385 APMKFTIVSIAINLTIAIGSFPF--IGGYGIALAEVSSSWVNTICLAITLLKRK------QINLPFKTIYRILSVSISAG  456 (518)
Q Consensus       385 ~~~~~~~~~~~vni~l~~~li~~--~G~~G~a~at~i~~~~~~~~~~~~l~k~~------~~~~~~~~~~~~~~~~~~~~  456 (518)
T Consensus       178 ~~~~~~~~~~~lhi~~~~llv~~~~~g~~Gaala~~~s~w~~~~~l~~yi~~~~~~~~w~~~s~~~~~~~~~~~lai~s~  257 (473)
T KOG1347         178 PLLVIGLVALVLHILLTWLLVSKLGLGIKGAALALVASYWLNVRILLLYAVLSGCLAAWSGFSGEFDSWGPFFALAIPSA  257 (473)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             28899888887402100136884355887612454336899999763304532616655343565532899999864403


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780793|r  457 LMGFF  461 (518)
Q Consensus       457 im~~~  461 (518)
T Consensus       258 ~micl  262 (473)
T KOG1347         258 VMICL  262 (473)
T ss_pred             HEEHH
T ss_conf             23338