HHsearch alignment for GI: 254780793 and conserved domain: TIGR01695

>TIGR01695 mviN integral membrane protein MviN; InterPro: IPR004268 The sequencing of a number of pathogenic bacterial genomes has led to novel virulence proteins being discovered that are yet to be biochemically characterised. One example is the MviN family of proteins, first described in Salmonella , and conserved across a wide variety of pathogens in both animals and plants. Further work on these proteins of as yet unknown function has revealed they are integral membrane molecules, and are part of an operon essential in at least one species . ; GO: 0009405 pathogenesis, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=596.83  Aligned_cols=511  Identities=31%  Similarity=0.524  Sum_probs=460.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             1368899999999999999999999999995777578999999997899999997--57789999999999984489789
Q gi|254780793|r    2 KIIRNFLTVCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAA--EGIFHNSFIPLFSQEKENNGSES   79 (518)
Q Consensus         2 ~~~k~~~~~~~~~~~skilG~~r~~~~a~~~G~~~~~da~~~a~~i~~~~~~l~~--~G~~~~a~ip~~~~~~~~~~~~~   79 (518)
T Consensus         1 sl~k~~~~v~~~TL~SRi~GfvR~~i~a~~fGag~~~DAF~vA~~~Pn~~RrlfaGiEGA~~~aFvP~f~~~~~~~g~~~   80 (538)
T TIGR01695         1 SLLKSTLIVSLGTLFSRILGFVRDAIIASAFGAGLVADAFNVAFKIPNLLRRLFAGIEGAFSSAFVPVFKKAKKKEGEKE   80 (538)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             92899999999999999999999999998836770799999999988999999852302477889999999996155578


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999-99999999999999999999996534344457887-541011-112456554443321246888765688998842
Q gi|254780793|r   80 AQR-LSSEIFSILILSLVVLTVVVELILPLLIRFIIAPG-FADQSD-KYFLTIQLSRVMFPSIIFISLASLVTGMLFALG  156 (518)
Q Consensus        80 ~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~a~g-~~~~~~-~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~  156 (518)
T Consensus        81 ~~~~f~~~~~~l~~~~~~l~~~~~~~~a-~~~~~l~a~g~~~~~~~nk~~~a~~l~~~~~pyl~l~sL~~~~~~~Ln~~~  159 (538)
T TIGR01695        81 ARRAFAEKVLTLLILVLLLVVLLGIFFA-PIVISLLAPGLFADDAANKFSLAVSLLRITFPYLLLISLAAVFGAILNARE  159 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8899999999999999999999999978-889973176435740245899999999999999999999999999997755


Q ss_pred             CHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEHH-------HHHHHHHHHHHCCCCCHHHCCC---CCCCCCCCCC
Q ss_conf             22799999985401034677776235686544320001-------2211101110002310121036---5444567754
Q gi|254780793|r  157 RYFIASIAPIVINVFPIFALTYALWHPSSPQETTYLLA-------WGVFLSNVVHFWIVYCCAKNDG---VKLRFQYPRL  226 (518)
Q Consensus       157 ~f~~~a~~~vi~ni~~i~~~~~~~~~~~~~~~~~~~~a-------~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~  226 (518)
T Consensus       160 ~F~~ps~~P~l~N~~~I~~l~~~~~~~~~~~~~g~~~~~~~~LL~~gvl~GG~~Q~l~~~~~l~~~G~R~~~~~prf~~~  239 (538)
T TIGR01695       160 RFFIPSFSPVLFNISVIVSLLFLDVSLGQLALAGMYLALIELLLAIGVLIGGVAQLLIQLPALRKAGIRGLLLKPRFNFR  239 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
T ss_conf             55256799999999999999999863012466667899999999999999999999999999710673035531010335


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHC---CCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             32410001346888764320120233320---2556-5566305777753321100000011123221002344443322
Q gi|254780793|r  227 THNVKFFLKLTFPLMVTGGIIQISNIVGR---AIAS-RETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKN  302 (518)
Q Consensus       227 ~~~~k~~l~~~~p~~l~~~~~~i~~~i~~---~~as-~~~g~vs~~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d  302 (518)
T Consensus       240 ~~~l~~~l~~~~p~~lg~s~~q~~~l~~t~L~~~AS~l~~Gs~s~~~yA~r~~~LP~gif~vsl~~v~lP~~s~~~~~~~  319 (538)
T TIGR01695       240 DPGLKRFLKLMLPTTLGVSASQITLLINTRLLALASFLEIGSVSALYYASRLYQLPLGIFGVSLATVLLPKLSKHASEGN  319 (538)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             45899999999999999999999999999999873155268999999999999989999999999999999998850268


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
Q ss_conf             36789998975411344215899999852572311121047864455456666555420105677531232023544331
Q gi|254780793|r  303 KQKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQND  382 (518)
Q Consensus       303 ~~~~~~~~~~~~~~~~~i~~p~~~~l~~~~~~ii~llf~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~  382 (518)
T Consensus       320 ~~~~~~~~~~~i~~~~~l~~P~s~~l~~ls~~I~~llf~~g~F~~~~~~~ta~~L~~y~lGl~~~~l~~vL~~~fYA~~d  399 (538)
T TIGR01695       320 WNELEELLNQGIRLTLLLTIPSSFGLLVLSEPIVSLLFERGAFSEEDALMTATILAAYALGLIFYSLQKVLLRAFYARKD  399 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             68999999999999999999999999998899999885378888889999999999999989999999999877875530


Q ss_pred             HHHHHHHHHHHHHHHHHHH----HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH---H
Q ss_conf             0134677788868999998----75202112004999999999999999999999711578898899999999999---9
Q gi|254780793|r  383 MKAPMKFTIVSIAINLTIA----IGSFPFIGGYGIALAEVSSSWVNTICLAITLLKRKQINLPFKTIYRILSVSIS---A  455 (518)
Q Consensus       383 ~~~~~~~~~~~~~vni~l~----~~li~~~G~~G~a~at~i~~~~~~~~~~~~l~k~~~~~~~~~~~~~~~~~~~~---~  455 (518)
T Consensus       400 ~~tP~~~~~~~~~~n~~l~GlCy~~l~~~l~~~G~a~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~v~as~~~  479 (538)
T TIGR01695       400 TKTPFIVSVISVVLNVLLSGLCYLLLIFPLGLSGIALATSLAAIVSAVLLYLRLKKRLKGILDIGVLKKLLKLVIASILA  479 (538)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             20489999999999999988999988888736899999999999999999999865204776135789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             99999999999986553100-02799999999999999999999999960078999999
Q gi|254780793|r  456 GLMGFFIILFRPYFNQFSSA-TTFFDPFKNLVIMLSGAMLVYLFSIFLFLGKDFLSPLQ  513 (518)
Q Consensus       456 ~im~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~vY~~~l~l~~~~~~~~~l~  513 (518)
T Consensus       480 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~~y~~~~~~~~~~~~~~~~r  538 (538)
T TIGR01695       480 AIIGVVLYLLVSVLAWSLGGKKFLVKNLLGLLALGLIGLLVYFLALALLKIEELELLLR  538 (538)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999998865203344312456689999999999999999999962999987409