HHsearch alignment for GI: 254780793 and conserved domain: TIGR01695

>TIGR01695 mviN integral membrane protein MviN; InterPro: IPR004268 The sequencing of a number of pathogenic bacterial genomes has led to novel virulence proteins being discovered that are yet to be biochemically characterised. One example is the MviN family of proteins, first described in Salmonella , and conserved across a wide variety of pathogens in both animals and plants. Further work on these proteins of as yet unknown function has revealed they are integral membrane molecules, and are part of an operon essential in at least one species . ; GO: 0009405 pathogenesis, 0016021 integral to membrane.
Probab=99.52  E-value=1.9e-12  Score=82.29  Aligned_cols=206  Identities=14%  Similarity=0.163  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             1368899999999999999999999---9999957775789999999978999999975778999999999998448978
Q gi|254780793|r    2 KIIRNFLTVCASTLGSRFLGFIRET---LVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIFHNSFIPLFSQEKENNGSE   78 (518)
Q Consensus         2 ~~~k~~~~~~~~~~~skilG~~r~~---~~a~~~G~~~~~da~~~a~~i~~~~~~l~~~G~~~~a~ip~~~~~~~~~~~~   78 (518)
T Consensus       245 ~~l~~~~p~~lg~s~~q~~~l~-~t~L~~~AS~l~~Gs~s-~~~yA~r~~~LP~gif~v-sl~~v~lP~~s~~~~~~~~~  321 (538)
T TIGR01695       245 RFLKLMLPTTLGVSASQITLLI-NTRLLALASFLEIGSVS-ALYYASRLYQLPLGIFGV-SLATVLLPKLSKHASEGNWN  321 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHH
T ss_conf             9999999999999999999999-99999873155268999-999999999989999999-99999999999885026868


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             99999999999999999999999999653434445788754101111245655444332124688876568899884222
Q gi|254780793|r   79 SAQRLSSEIFSILILSLVVLTVVVELILPLLIRFIIAPGFADQSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRY  158 (518)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~a~g~~~~~~~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~~f  158 (518)
T Consensus       322 ~~~~~~~~~i~~~~~l~~P~s~~l~~ls~~I~~llf~~g~F~~-~~~~~ta~~L~~y~lGl~~~~l~~vL~~~fYA~~d~  400 (538)
T TIGR01695       322 ELEELLNQGIRLTLLLTIPSSFGLLVLSEPIVSLLFERGAFSE-EDALMTATILAAYALGLIFYSLQKVLLRAFYARKDT  400 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999999988999998853788888-899999999999999899999999998778755302


Q ss_pred             HHHHHHHHHHHCHHHHHH----HHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHCCC
Q ss_conf             799999985401034677----7762356865443200012211101110002310121036
Q gi|254780793|r  159 FIASIAPIVINVFPIFAL----TYALWHPSSPQETTYLLAWGVFLSNVVHFWIVYCCAKNDG  216 (518)
Q Consensus       159 ~~~a~~~vi~ni~~i~~~----~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~  216 (518)
T Consensus       401 ~tP~~~~~~~~~~n~~l~GlCy~~l-----~~~l~~~G~a~a~~~~~~~~~~~l~~~l~~~~  457 (538)
T TIGR01695       401 KTPFIVSVISVVLNVLLSGLCYLLL-----IFPLGLSGIALATSLAAIVSAVLLYLRLKKRL  457 (538)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             0489999999999999988999988-----88873689999999999999999999986520