HHsearch alignment for GI: 254780793 and conserved domain: pfam01554
>pfam01554 MatE MatE. The MatE domain
Probab=99.59 E-value=2.8e-13 Score=86.58 Aligned_cols=156 Identities=13% Similarity=0.142 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99999999999999999999995777578999999997899999997577899999999999844897899999999999
Q gi|254780793|r 10 VCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIFHNSFIPLFSQEKENNGSESAQRLSSEIFS 89 (518)
Q Consensus 10 ~~~~~~~skilG~~r~~~~a~~~G~~~~~da~~~a~~i~~~~~~l~~~G~~~~a~ip~~~~~~~~~~~~~~~~~~~~~~~ 89 (518)
T Consensus 2 ~~l~~~~~~~~~~vd~~~vg~-lG~~~-lAa~~i~~~i~~~~~~~~-~-g~~~a~~~~vs~~~Ga~~~~~~~~~~~~~~~ 77 (161)
T pfam01554 2 IILENLLQSLYSLIDTLFVGH-LGAVA-LAAVSIANSIASLIFMFL-L-GLSTALTTLVGQALGAGNFKRAGVALRQGLI 77 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCHHH-HHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 888999999999999999997-49999-999999999999999999-9-9999999999998688759999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 99999999999999965343444578875410111124565544433212468887656889988422279999998540
Q gi|254780793|r 90 ILILSLVVLTVVVELILPLLIRFIIAPGFADQSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIASIAPIVIN 169 (518)
Q Consensus 90 ~~~~~~~~l~~l~~~~~~~~~~~l~a~g~~~~~~~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~~f~~~a~~~vi~n 169 (518)
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~v~~~a~~yl~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~i~~~ 152 (161)
T pfam01554 78 LSLLISLPIALLIILFREPILSLF-----TQDEEVLELASKYLRILALGIPFLSLQFVLSGFLRGAGDTKPPLYINLISL 152 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 999999999999998899999997-----978999999999999999999999999999999988996599999999999
Q ss_pred CHHHH
Q ss_conf 10346
Q gi|254780793|r 170 VFPIF 174 (518)
Q Consensus 170 i~~i~ 174 (518)
T Consensus 153 ~~ni~ 157 (161)
T pfam01554 153 LLNIP 157 (161)
T ss_pred HHHHH
T ss_conf 99999