HHsearch alignment for GI: 254780793 and conserved domain: pfam03023
>pfam03023 MVIN MviN-like protein. Deletion of the mviN virulence gene in Salmonella enterica serovar. Typhimurium greatly reduces virulence in a mouse model of typhoid-like disease. Open reading frames encoding homologues of MviN have since been identified in a variety of bacteria, including pathogens and non-pathogens and plant-symbionts. In the nitrogen-fixing symbiont Rhizobium tropici, mviN is required for motility. The MviM protein is predicted to be membrane-associated.
Probab=100.00 E-value=0 Score=556.07 Aligned_cols=440 Identities=32% Similarity=0.543 Sum_probs=414.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99995777578999999997899999997577899999999999844897899999999999999999999999999653
Q gi|254780793|r 28 VAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIFHNSFIPLFSQEKENNGSESAQRLSSEIFSILILSLVVLTVVVELILP 107 (518)
Q Consensus 28 ~a~~~G~~~~~da~~~a~~i~~~~~~l~~~G~~~~a~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 107 (518)
T Consensus 1 iA~~fGa~~~~DAf~~A~~iPn~l~~l~~~Gals~afIP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~fap 79 (452)
T pfam03023 1 IAAYFGAGPLADAFNVAFRIPNLLRRLFAEGAFSSAFVPVFAELKQ-ADKDEAAEFVRRVSTLLIGVLLLVTLLGILAAP 79 (452)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9499787848699999999899999999999999999999999985-396999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
Q ss_conf 43444578875410111124565544433212468887656889988422279999998540103467777623568654
Q gi|254780793|r 108 LLIRFIIAPGFADQSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIASIAPIVINVFPIFALTYALWHPSSPQ 187 (518)
Q Consensus 108 ~~~~~l~a~g~~~~~~~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~~f~~~a~~~vi~ni~~i~~~~~~~~~~~~~~ 187 (518)
T Consensus 80 ~lv~-l~a~Gf~--~~~~~la~~l~ri~~p~i~f~~l~a~~~~~Lna~~~F~~~a~~pi~~N~~~I~~ll~~~~~--~g~ 154 (452)
T pfam03023 80 WVIR-LLAPGFD--AETFSLTVSLLRITFPYLLLVSLSAVFGAVLNARKKFFAPAFSPVLLNIGVILTLLFLANY--FGR 154 (452)
T ss_pred HHHH-HHCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH--CCH
T ss_conf 9999-9858875--4689999999999999999999999999999883885557875898999999999999985--561
Q ss_pred CCCEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCC-CCCCCHH
Q ss_conf 432000122111011100023101210365444567754324100013468887643201202333202556-5566305
Q gi|254780793|r 188 ETTYLLAWGVFLSNVVHFWIVYCCAKNDGVKLRFQYPRLTHNVKFFLKLTFPLMVTGGIIQISNIVGRAIAS-RETGIIS 266 (518)
Q Consensus 188 ~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~p~~l~~~~~~i~~~i~~~~as-~~~g~vs 266 (518)
T Consensus 155 ~~i~~la~g~~~G~~~q~l~~~~~l~k~g~~~~~~~~~~~~~lk~~~~l~~P~~l~~~~~qin~lvd~~~AS~l~~G~vs 234 (452)
T pfam03023 155 EPIYGLAIGVLIGGVLQLLVQLPFLRKAGLLLKPRFNFRDKGVKRFLALALPTLLGVSVSQLNLLIDTALASFLAEGSIS 234 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 89999999999999999999999999829964554354543688999999999999999999999999998735432799
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCC
Q ss_conf 77775332110000001112322100234444332236789998975411344215899999852572311121047864
Q gi|254780793|r 267 AIQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKNKQKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFS 346 (518)
Q Consensus 267 ~~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d~~~~~~~~~~~~~~~~~i~~p~~~~l~~~~~~ii~llf~~g~F~ 346 (518)
T Consensus 235 ~l~yA~rl~~lP~gi~~vai~tv~~P~lS~~~~~~d~~~~~~~l~~~l~~~~~l~iPa~v~l~vl~~pIv~llf~rG~F~ 314 (452)
T pfam03023 235 YLYYADRIYQLPLGIFGVSVSTVLLPRLSRHAKDGDWDEFLDLLDQAIRLTLLLMIPASFGLLVLSDPIVSVLYERGAFS 314 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999888787899999855998889999998768999999999999999999999999999997899999998048999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 45545666655542010567753123202354433101346777888689999987520211200499999999999999
Q gi|254780793|r 347 SQNTILVSSFLSIYSIGILANILSKSLSTAFYAQNDMKAPMKFTIVSIAINLTIAIGSFPFIGGYGIALAEVSSSWVNTI 426 (518)
Q Consensus 347 ~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~~~~~~~~~~~~~~vni~l~~~li~~~G~~G~a~at~i~~~~~~~ 426 (518)
T Consensus 315 ~~~~~~ta~~L~~y~~gl~~~~l~~il~r~fyA~~dtktP~~~s~i~~~~ni~l~~~l~~~~g~~GlAlatsis~~v~~~ 394 (452)
T pfam03023 315 PEDVTATAGVLAAYALGLIPYALVKLLSRVFYAREDTKTPFKISLISAVLNILLSLLLLPPLGVVGLALATSLSAWINLV 394 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998899999999998858657858899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997115788988999999999999999999999999865531
Q gi|254780793|r 427 CLAITLLKRKQINLPFKTIYRILSVSISAGLMGFFIILFRPYFNQFS 473 (518)
Q Consensus 427 ~~~~~l~k~~~~~~~~~~~~~~~~~~~~~~im~~~~~~~~~~~~~~~ 473 (518)
T Consensus 395 ll~~~l~k~~~~~~~~~~~~~~~k~~~as~~m~~~~~~~~~~~~~~~ 441 (452)
T pfam03023 395 FLYYILRKRLGGHSLRGWKTFLASLVVPTALMGGVILLLSSLTQGLW 441 (452)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998658776059999999999999999999999999860254