BLAST/PSIBLAST alignment of GI: 254780793 and GI: 86356043 at iteration 1
>gi|86356043|ref|YP_467935.1| virulence factor transmembrane protein [Rhizobium etli CFN 42] Length = 526
>gi|86280145|gb|ABC89208.1| virulence factor transmembrane protein [Rhizobium etli CFN 42] Length = 526
 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/519 (42%), Positives = 342/519 (65%), Gaps = 6/519 (1%)

Query: 1   MKIIRNFLTVCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIF 60
           M +++ F TV  +TLGSR  GF+RETL+AA LG G + DVFY AF    +FRRL AEG F
Sbjct: 1   MSLVKKFATVGGATLGSRIFGFVRETLMAAALGTGPMADVFYAAFRFPNLFRRLFAEGAF 60

Query: 61  HNSFIPLFSQEKENNGSESAQRLSSEIFSILILSLVVLTVVVELILPLLIRFIIAPGFAD 120
           + +F+PLF++E E NG++ A+R S E+F +L   L+++T+V+EL +PLL+RFIIAPGF D
Sbjct: 61  NAAFVPLFAKEIEANGTDGAKRFSEEVFGVLFSVLLLITIVMELAMPLLVRFIIAPGFTD 120

Query: 121 QSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIASIAPIVINVFPIFALTYAL 180
             DK+ +TI+++ VMFP ++ +SL ++++GML +L  +F A+IAP+ +NV  I AL Y+L
Sbjct: 121 DPDKFSITIRMAAVMFPYLMCMSLTAMMSGMLNSLHHFFAAAIAPVFLNVVMIGALFYSL 180

Query: 181 WHPSSPQETTYLLAWGVFLSNVVHFWIVYCCAKNDGVKLRFQYPRLTHNVKFFLKLTFPL 240
           +  + P  T + L+WGV  + V+   +VY      G+ +  ++P++T NVK  L L  P 
Sbjct: 181 YTGADPLATAWYLSWGVLAAGVLQLAVVYIGVLAAGMSIGLRFPKMTPNVKRLLILAVPA 240

Query: 241 MVTGGIIQISNIVGRAIASRETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRS 300
            VTGGI QI+ ++G+AIAS   G I+A+QYA+RIY LP+GV+G A+ +V+LP L+R+L+ 
Sbjct: 241 AVTGGITQINQLIGQAIASSRDGAIAALQYADRIYQLPLGVVGVAVGVVLLPELARALKG 300

Query: 301 KNKQKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIY 360
              +++  LQN++IE + F  IP+A AL++LS EI++ LYERGAF  +NT +V + L+IY
Sbjct: 301 GALREAANLQNRSIEFVLFLTIPAAFALWILSDEIIRVLYERGAFHQENTAVVGTILAIY 360

Query: 361 SIGILANILSKSLSTAFYAQNDMKAPMKFTIVSIAINLTIAIGSFPFIGGYGIALAEVSS 420
            IG+ A +L K+L   FYA+ D K PM+F+ +++  N   A+  FPF+G  GIA+AE ++
Sbjct: 361 GIGLPAFVLIKALQPGFYAREDTKTPMRFSAIAVGTNCVTALTLFPFMGAPGIAVAEATA 420

Query: 421 SWVNTICLAITLLKRKQINLPFKTIYRILSVSISAGLMGFFIILFRPYFNQF-SSATTFF 479
            W++T+ L  TLL+R  +   +    R   + +++ +MG  I   + Y+  + +S     
Sbjct: 421 GWISTLLLFTTLLRRGHLTWEWALAKRAALLIVASAVMGAAIFFLKHYWAPWLASGAPLL 480

Query: 480 DPFKNLVIMLSGAMLVYLFSIFLFLGKDFLSPLQQMIRK 518
                L ++++ AML+Y  + FL  G +       MIR+
Sbjct: 481 TKVGTLGLLIAIAMLIYFAAAFLIGGANL-----GMIRR 514