BLAST/PSIBLAST alignment of GI: 254780793 and GI: 86356043 at iteration 1
>gi|86356043|ref|YP_467935.1| virulence factor transmembrane protein [Rhizobium etli CFN 42] Length = 526
>gi|86280145|gb|ABC89208.1| virulence factor transmembrane protein [Rhizobium etli CFN 42] Length = 526
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/519 (42%), Positives = 342/519 (65%), Gaps = 6/519 (1%)
Query: 1 MKIIRNFLTVCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIF 60
M +++ F TV +TLGSR GF+RETL+AA LG G + DVFY AF +FRRL AEG F
Sbjct: 1 MSLVKKFATVGGATLGSRIFGFVRETLMAAALGTGPMADVFYAAFRFPNLFRRLFAEGAF 60
Query: 61 HNSFIPLFSQEKENNGSESAQRLSSEIFSILILSLVVLTVVVELILPLLIRFIIAPGFAD 120
+ +F+PLF++E E NG++ A+R S E+F +L L+++T+V+EL +PLL+RFIIAPGF D
Sbjct: 61 NAAFVPLFAKEIEANGTDGAKRFSEEVFGVLFSVLLLITIVMELAMPLLVRFIIAPGFTD 120
Query: 121 QSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIASIAPIVINVFPIFALTYAL 180
DK+ +TI+++ VMFP ++ +SL ++++GML +L +F A+IAP+ +NV I AL Y+L
Sbjct: 121 DPDKFSITIRMAAVMFPYLMCMSLTAMMSGMLNSLHHFFAAAIAPVFLNVVMIGALFYSL 180
Query: 181 WHPSSPQETTYLLAWGVFLSNVVHFWIVYCCAKNDGVKLRFQYPRLTHNVKFFLKLTFPL 240
+ + P T + L+WGV + V+ +VY G+ + ++P++T NVK L L P
Sbjct: 181 YTGADPLATAWYLSWGVLAAGVLQLAVVYIGVLAAGMSIGLRFPKMTPNVKRLLILAVPA 240
Query: 241 MVTGGIIQISNIVGRAIASRETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRS 300
VTGGI QI+ ++G+AIAS G I+A+QYA+RIY LP+GV+G A+ +V+LP L+R+L+
Sbjct: 241 AVTGGITQINQLIGQAIASSRDGAIAALQYADRIYQLPLGVVGVAVGVVLLPELARALKG 300
Query: 301 KNKQKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIY 360
+++ LQN++IE + F IP+A AL++LS EI++ LYERGAF +NT +V + L+IY
Sbjct: 301 GALREAANLQNRSIEFVLFLTIPAAFALWILSDEIIRVLYERGAFHQENTAVVGTILAIY 360
Query: 361 SIGILANILSKSLSTAFYAQNDMKAPMKFTIVSIAINLTIAIGSFPFIGGYGIALAEVSS 420
IG+ A +L K+L FYA+ D K PM+F+ +++ N A+ FPF+G GIA+AE ++
Sbjct: 361 GIGLPAFVLIKALQPGFYAREDTKTPMRFSAIAVGTNCVTALTLFPFMGAPGIAVAEATA 420
Query: 421 SWVNTICLAITLLKRKQINLPFKTIYRILSVSISAGLMGFFIILFRPYFNQF-SSATTFF 479
W++T+ L TLL+R + + R + +++ +MG I + Y+ + +S
Sbjct: 421 GWISTLLLFTTLLRRGHLTWEWALAKRAALLIVASAVMGAAIFFLKHYWAPWLASGAPLL 480
Query: 480 DPFKNLVIMLSGAMLVYLFSIFLFLGKDFLSPLQQMIRK 518
L ++++ AML+Y + FL G + MIR+
Sbjct: 481 TKVGTLGLLIAIAMLIYFAAAFLIGGANL-----GMIRR 514