HHsearch alignment for GI: 254780794 and conserved domain: COG0008
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis].
Probab=97.09 E-value=0.0023 Score=42.75 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=57.9
Q ss_pred EEEEECC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 8960158--96781055798899999998505995899973115730789858999999999999996286811123652
Q gi|254780794|r 8 FVSGVQP--TGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIFK 85 (355)
Q Consensus 8 vltG~~P--tG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if~ 85 (355)
T Consensus 10 v~tRFAPsPtG~LHiG~artAl~n~~~Ar~~~G-~fiLRiED----TD~~R--~~~e~~~~I~~~L~WLGl~wde~-~~~ 81 (472)
T COG0008 10 VRTRFAPSPTGYLHIGHARTALLNYLYARKYGG-KFILRIED----TDPER--ETPEAEDAILEDLEWLGLDWDEG-PYY 81 (472)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC-EEEEEECC----CCCCC--CCHHHHHHHHHHHHHCCCCCCCC-EEE
T ss_conf 489779599985426889999997999998399-79999647----99887--88789999999998668888976-143
Q ss_pred CCCHHHHH-HHH-HH------HHHCCCHHHHHHC
Q ss_conf 47407889-999-99------8510536775201
Q gi|254780794|r 86 QSDVGYHA-DLS-WI------LSCVARMGWMNNM 111 (355)
Q Consensus 86 QS~v~e~~-eL~-~~------l~~~~~~~~l~r~ 111 (355)
T Consensus 82 QS~r~~~Y~~~~~~Li~~G~AY~c~ct~eele~~ 115 (472)
T COG0008 82 QSERFDIYYEYAEKLIEKGKAYVCYCTPEELEEM 115 (472)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
T ss_conf 6423999999999999879968866898999999