HHsearch alignment for GI: 254780794 and conserved domain: PRK12283
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=849.87 Aligned_cols=343 Identities=34% Similarity=0.522 Sum_probs=309.5
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 88789601589678105579889999999850599589997311573078-98589999999999999962868111236
Q gi|254780794|r 5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN-IVQENLRYQSRLFVASFLAAGVDPSRNII 83 (355)
Q Consensus 5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~-~~~~~~~~~~~~~~~~~lA~Gldp~k~~i 83 (355)
T Consensus 2 ~~rvlSGiqPTG~lHLGNylGai~~~v~lQ~--~~~~~~~IaDlHAlT~~~~~p~~l~~~~~~~~a~~LA~GlDP~ks~i 79 (398)
T PRK12283 2 PDRVLSGMRPTGRLHLGHYHGVLKNWVKLQH--EYPCFFFVADWHALTTHYETPEVIEKNVWDMVIDWLAAGVDPAQATL 79 (398)
T ss_pred CCCCEECCCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 9727527178998616889999999999860--37708999536552078789999999999999999975888130758
Q ss_pred EECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCC-CHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
Q ss_conf 524740788999999851053677520122112332011-1013466411114665435652866011121212689999
Q gi|254780794|r 84 FKQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKENK-EETASLGLFMYPVLMAADILLYRATHVPVGEDQRQHLEIT 162 (355)
Q Consensus 84 f~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~-~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~Hielt 162 (355)
T Consensus 80 f~QS~Vpeh~eL~wiL~~~~~~g~L~Rm~q~Kdk~~~~~~~~~~~~GL~~YPvLmAADILly~a~~VPVG~DQ~QHlELt 159 (398)
T PRK12283 80 FIQSKVPEHAELHLLLSMITPLGWLERVPTYKDQQEKLKEKDLSTYGFLGYPLLQAADILLYRAGLVPVGEDQVPHVEMT 159 (398)
T ss_pred EECCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHH
T ss_conf 86788689999999972778779987264113455401455543320224758999888860767553066408999999
Q ss_pred HHHHHHHHHHHCHHHHHHC------CCCC----------------------------------------------CCCCC
Q ss_conf 9999999876140110000------0123----------------------------------------------21113
Q gi|254780794|r 163 RLIAQRFNTEFERKIKEVA------QKYA----------------------------------------------QEEQY 190 (355)
Q Consensus 163 RdiA~rfN~~yg~~~~~~~------~~~~----------------------------------------------~~~~~ 190 (355)
T Consensus 160 RdiA~rFN~~yg~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (398)
T PRK12283 160 REIARRFNHLYGREPGFEEKAEAAIKKLGKKRAKLYHELRNAYQEEGDDEALEQARALLQEQQNLSMGDRERLFGYLEGA 239 (398)
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
T ss_conf 99999999871766442100134443102100123333433221024202221233321000112210033331002466
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 45743143223475643033567741113213455445200145388999998752001223346434556687634313
Q gi|254780794|r 191 SKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAKKIQKAKTDGDVLPSEVSGLENRLEAKNLI 270 (355)
Q Consensus 191 ~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~kKI~ka~TDs~~~~~~~~~~~~~~~v~~Ll 270 (355)
T Consensus 240 ~~~~lp~P~~l~~-~~~~m~glD--GkKMSKS~~---n~I~L~D~~~~I~KKI~kavTDs~~~~~~dpg~pe~~~v~nL~ 313 (398)
T PRK12283 240 GKIILPEPQALLT-EASKMPGLD--GQKMSKSYG---NTIGLREDPETVTKKIRTMPTDPARVRRTDPGDPEKCPVWQLH 313 (398)
T ss_pred CCCCCCCCCCCCC-CCCCCCCCC--CCCCCCCCC---CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 6302578711257-566266999--864579999---9755528999999999746669876756778996622599999
Q ss_pred HHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31122222528889998679998999899999999983379999999982799999999999999999999999999998
Q gi|254780794|r 271 EIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLKDKSYLDTILVEGANRARCRAQETMKYVNEI 350 (355)
Q Consensus 271 ~ifs~~~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l~~d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr~~ 350 (355)
T Consensus 314 ~i~s~~~~~~~~~~~~~~~g~g~~~~Kk~Lae~i~e~L~PiRer~~el~~d~~~l~~IL~~Ga~kAr~iA~~tl~~Vr~~ 393 (398)
T PRK12283 314 QVYSDEETKEWVQKGCRSAGIGCLDCKQPVIEAILREQQPMRERAQKYEDDPSLVRAIVADGCEKARKEARETMRDVREA 393 (398)
T ss_pred HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99779337899999987679878999999999999985899999999971999999999999999999999999999997
Q ss_pred HCCCC
Q ss_conf 28899
Q gi|254780794|r 351 VGLSH 355 (355)
Q Consensus 351 iGl~y 355 (355)
T Consensus 394 ~GLsy 398 (398)
T PRK12283 394 MGLSY 398 (398)
T ss_pred CCCCC
T ss_conf 19999