HHsearch alignment for GI: 254780794 and conserved domain: PRK12284
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=817.39 Aligned_cols=325 Identities=33% Similarity=0.522 Sum_probs=291.9
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 88789601589678105579889999999850599589997311573078985899999999999999628681112365
Q gi|254780794|r 5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIF 84 (355)
Q Consensus 5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if 84 (355)
T Consensus 2 ~~RILSGIqPTG~lHLGNY~GAik~~v~~~~q~~~e~f~fIAD~HALT~~~dp~~l~~~t~eiaa~~LA~GlDPekst~f 81 (436)
T PRK12284 2 TTRVLTGITTTGTPHLGNYVGAIRPAIAASRQPGVESFYFLADYHALIKCDDPARIQRSTLEIAATWLAAGLDPERVTFY 81 (436)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 97304574889975288899999999998638998669999640005688999999999999999999858680222588
Q ss_pred ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHC------CCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHH
Q ss_conf 2474078899999985105367752012211233201------1101346641111466543565286601112121268
Q gi|254780794|r 85 KQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKEN------KEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQH 158 (355)
Q Consensus 85 ~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~------~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~H 158 (355)
T Consensus 82 ~QS~VPE~~EL~wiLs~~t~~g~L~R~~~yK~~~dkn~~~g~d~d~~v~~GLf~YPVLMAADILly~A~~VPVG~DQ~QH 161 (436)
T PRK12284 82 RQSDIPEIPELTWLLTCVAGKGLLNRAHAYKAAVDKNVAAGEDPDAGVTAGLFMYPVLMAADILMFNAHKVPVGRDQIQH 161 (436)
T ss_pred ECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 78887799999999976384888751030211767777626575445443122470788876774068751267556999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99999999999876140110000012321113457431432234756430335677411132134554452001453889
Q gi|254780794|r 159 LEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDI 238 (355)
Q Consensus 159 ieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~ 238 (355)
T Consensus 162 lEltRdIA~rFN~~YG~e-----------------~F~~Pea~i~e~~a~lpGlD--GrKMSKSy~---NtI~Lf~~~k~ 219 (436)
T PRK12284 162 IEMARDIAQRFNHLYGGE-----------------FFVLPEAVIEESVATLPGLD--GRKMSKSYD---NTIPLFSPREE 219 (436)
T ss_pred HHHHHHHHHHHHHHHCCC-----------------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCC---CCCCCCCCHHH
T ss_conf 999999999999870883-----------------63788442368877224999--870557889---80648789699
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998752001223346434556687634313311222225288899986799989998999999999833799999999
Q gi|254780794|r 239 IAKKIQKAKTDGDVLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHL 318 (355)
Q Consensus 239 I~kKI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l 318 (355)
T Consensus 220 l~K~I~~ivTDS~~--~~ePkdp~~~~lf~iy~afa~~~~~~~l~~~y-~~G~G~G~~K~~L~e~i~~~l~P~Rery~~L 296 (436)
T PRK12284 220 LKKAIFRIVTDSRA--PGEPKDPEGSALFQLYQAFATPEETAAFRQAL-ADGIAWGDAKQRLFERIDRELAPMRERYEAL 296 (436)
T ss_pred HHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99985057379999--88889987581999999868935699999998-7687689999999999999860499999999
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 827999999999999999999999999999982889
Q gi|254780794|r 319 LKDKSYLDTILVEGANRARCRAQETMKYVNEIVGLS 354 (355)
Q Consensus 319 ~~d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~ 354 (355)
T Consensus 297 ~~dP~~ve~iL~~GAeKAR~vA~p~m~evR~AVGLR 332 (436)
T PRK12284 297 IARPADIEDILLAGAAKARRIATPFLAELREAVGLR 332 (436)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 839999999999999999998799999999982852