HHsearch alignment for GI: 254780794 and conserved domain: PRK12284

>PRK12284 tryptophanyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=817.39  Aligned_cols=325  Identities=33%  Similarity=0.522  Sum_probs=291.9

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             88789601589678105579889999999850599589997311573078985899999999999999628681112365
Q gi|254780794|r    5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIF   84 (355)
Q Consensus         5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if   84 (355)
T Consensus         2 ~~RILSGIqPTG~lHLGNY~GAik~~v~~~~q~~~e~f~fIAD~HALT~~~dp~~l~~~t~eiaa~~LA~GlDPekst~f   81 (436)
T PRK12284          2 TTRVLTGITTTGTPHLGNYVGAIRPAIAASRQPGVESFYFLADYHALIKCDDPARIQRSTLEIAATWLAAGLDPERVTFY   81 (436)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             97304574889975288899999999998638998669999640005688999999999999999999858680222588


Q ss_pred             ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHC------CCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHH
Q ss_conf             2474078899999985105367752012211233201------1101346641111466543565286601112121268
Q gi|254780794|r   85 KQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKEN------KEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQH  158 (355)
Q Consensus        85 ~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~------~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~H  158 (355)
T Consensus        82 ~QS~VPE~~EL~wiLs~~t~~g~L~R~~~yK~~~dkn~~~g~d~d~~v~~GLf~YPVLMAADILly~A~~VPVG~DQ~QH  161 (436)
T PRK12284         82 RQSDIPEIPELTWLLTCVAGKGLLNRAHAYKAAVDKNVAAGEDPDAGVTAGLFMYPVLMAADILMFNAHKVPVGRDQIQH  161 (436)
T ss_pred             ECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf             78887799999999976384888751030211767777626575445443122470788876774068751267556999


Q ss_pred             HHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99999999999876140110000012321113457431432234756430335677411132134554452001453889
Q gi|254780794|r  159 LEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDI  238 (355)
Q Consensus       159 ieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~  238 (355)
T Consensus       162 lEltRdIA~rFN~~YG~e-----------------~F~~Pea~i~e~~a~lpGlD--GrKMSKSy~---NtI~Lf~~~k~  219 (436)
T PRK12284        162 IEMARDIAQRFNHLYGGE-----------------FFVLPEAVIEESVATLPGLD--GRKMSKSYD---NTIPLFSPREE  219 (436)
T ss_pred             HHHHHHHHHHHHHHHCCC-----------------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCC---CCCCCCCCHHH
T ss_conf             999999999999870883-----------------63788442368877224999--870557889---80648789699


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99998752001223346434556687634313311222225288899986799989998999999999833799999999
Q gi|254780794|r  239 IAKKIQKAKTDGDVLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHL  318 (355)
Q Consensus       239 I~kKI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l  318 (355)
T Consensus       220 l~K~I~~ivTDS~~--~~ePkdp~~~~lf~iy~afa~~~~~~~l~~~y-~~G~G~G~~K~~L~e~i~~~l~P~Rery~~L  296 (436)
T PRK12284        220 LKKAIFRIVTDSRA--PGEPKDPEGSALFQLYQAFATPEETAAFRQAL-ADGIAWGDAKQRLFERIDRELAPMRERYEAL  296 (436)
T ss_pred             HHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99985057379999--88889987581999999868935699999998-7687689999999999999860499999999


Q ss_pred             HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             827999999999999999999999999999982889
Q gi|254780794|r  319 LKDKSYLDTILVEGANRARCRAQETMKYVNEIVGLS  354 (355)
Q Consensus       319 ~~d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~  354 (355)
T Consensus       297 ~~dP~~ve~iL~~GAeKAR~vA~p~m~evR~AVGLR  332 (436)
T PRK12284        297 IARPADIEDILLAGAAKARRIATPFLAELREAVGLR  332 (436)
T ss_pred             HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             839999999999999999998799999999982852