HHsearch results for GI: 254780794 and protein with PDBid: 1i6k_A

>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A
Probab=100.00  E-value=0  Score=699.60  Aligned_cols=326  Identities=41%  Similarity=0.640  Sum_probs=308.1

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             88789601589678105579889999999850599589997311573078985899999999999999628681112365
Q gi|254780794|r    5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIF   84 (355)
Q Consensus         5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if   84 (355)
                      ++|||||+||||++|||||+|++++|+.+|+  ++++|||||||||||++.++.++++++++++++|+|||+||+|++||
T Consensus         1 mkrv~tG~~PSG~~HlG~~~g~i~~~~~lq~--~~~~~i~iAD~ha~~~~~~~~~l~~~~~~~~~~~~A~G~dp~k~~i~   78 (328)
T 1i6k_A            1 MKTIFSGIQPSGVITIGNYIGALRQFVELQH--EYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLF   78 (328)
T ss_dssp             CCEEEEEECCCSCCBHHHHHHTHHHHHHHTT--TSEEEEEECHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             9846857288870378889999999999857--99889996308664067899999999999999999837998730798


Q ss_pred             ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
Q ss_conf             24740788999999851053677520122112332011101346641111466543565286601112121268999999
Q gi|254780794|r   85 KQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQHLEITRL  164 (355)
Q Consensus        85 ~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~HieltRd  164 (355)
                      +||++++|.||+|+|+|+++++++.|+++||++.++  .++.++|+|+||+|||||||+|++|+||||+||+||+|||||
T Consensus        79 ~qs~~~~~~~l~~~~~~~~~~~~~~r~~~~k~~~~~--~~~~~~g~l~YP~lQaADIl~~~~d~vpvG~DQ~~h~~ltRd  156 (328)
T 1i6k_A           79 IQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAG--KEAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRD  156 (328)
T ss_dssp             EGGGCTHHHHHHHHHHHHSCHHHHHTCHHHHHHHTT--CSSCCHHHHTHHHHHHHHHHTTTCSEEECCGGGHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf             504235578999999853247888876412322124--678872323756876203063189915488026899999999


Q ss_pred             HHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             99999876140110000012321113457431432234756430335677411132134554452001453889999987
Q gi|254780794|r  165 IAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAKKIQ  244 (355)
Q Consensus       165 iA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~kKI~  244 (355)
                      ||+|||+.||.                  .|+.|...+...++++|++.+|++|||||+++++|+|+|+|+|++|++||+
T Consensus       157 ia~k~n~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~kmskS~~~~~~~I~l~d~~~~i~kKi~  218 (328)
T 1i6k_A          157 LAERFNKRYGE------------------LFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIK  218 (328)
T ss_dssp             HHHHHHHHHCS------------------CCCCCEEECCSSSSSCBCSSCTTSBCCTTCSCGGGCCBTTCCHHHHHHHHH
T ss_pred             HHHHHHHHCCC------------------CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf             99874652487------------------567731135654345652489876677678985553036589999997414


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf             52001223346434556687634313311222225288899986799989998999999999833799999999827999
Q gi|254780794|r  245 KAKTDGDVLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLKDKSY  324 (355)
Q Consensus       245 ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l~~d~~~  324 (355)
                      +|+||+..+.  .+..+.+|++++++.+|+.+++.+.+++..+|++.+||+||+.|+|.|+++|+||||||++|++|+ +
T Consensus       219 ~a~td~~~~~--~~~~~~~p~~~~l~~i~~~~~~~~~eel~~~y~~~~~gdlK~~lae~l~~~l~Pirek~~~l~~~~-~  295 (328)
T 1i6k_A          219 SAVTDSEGTI--RYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-E  295 (328)
T ss_dssp             HCCCCSSCCC--CCBTTTBHHHHHHHHHHHHHHCCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-H
T ss_pred             CCCCCCCCCC--CCCCCCCCCCCCHHHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-H
T ss_conf             4657897766--767678998541422002158867999999977998668999999999998589999999985977-8


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999999999999999999999999828899
Q gi|254780794|r  325 LDTILVEGANRARCRAQETMKYVNEIVGLSH  355 (355)
Q Consensus       325 v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~y  355 (355)
                      |++||++|++|||++|++||++||++|||+|
T Consensus       296 l~~iL~~G~~kAr~~A~~tl~~Vr~~~Gl~~  326 (328)
T 1i6k_A          296 LDRVLDEGAEKANRVASEMVRKMEQAMGLGR  326 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999999999999999999999999828987