HHsearch results for GI: 254780794 and protein with PDBid: 2g36_A
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: TRP; 2.50A {Thermotoga maritima}
Probab=100.00 E-value=0 Score=633.52 Aligned_cols=327 Identities=31% Similarity=0.472 Sum_probs=294.8
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 888789601589678105579889999999850599589997311573078-9858999999999999996286811123
Q gi|254780794|r 4 SDNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN-IVQENLRYQSRLFVASFLAAGVDPSRNI 82 (355)
Q Consensus 4 ~~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~-~~~~~~~~~~~~~~~~~lA~Gldp~k~~ 82 (355)
+.-||+||++|||.+|||||+|+|.+|+++|+++ +++++|||||||+|++ .++.++++++++++++|+|||+||+|++
T Consensus 11 ~~~ri~tG~~PTG~lHlG~~i~~i~~~~~lq~~g-~~~~~~iaD~ha~~~~~~~~~~~~~~~~~~~~~~~a~g~~p~k~~ 89 (340)
T 2g36_A 11 HHMRILSGMRPTGKLHIGHLVGALENWVKLQEEG-NECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSV 89 (340)
T ss_dssp -CCEEEEEECCCSSCBHHHHHTHHHHHHHHHHTT-CEEEEEECHHHHHHHHTTCCTTHHHHHHHHHHHHHHTTCCTTTSE
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEEECCHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 4453665618897145887899999999999769-949999723010148999999999999999999998268987349
Q ss_pred EEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH-HHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHH
Q ss_conf 652474078899999985105367752012211233-2011101346641111466543565286601112121268999
Q gi|254780794|r 83 IFKQSDVGYHADLSWILSCVARMGWMNNMIQFKEKS-KENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQHLEI 161 (355)
Q Consensus 83 if~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~-~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~Hiel 161 (355)
||+||++++|.++.|+++|.++++++.|+++||+.. .....+..++|+|+||+|||||||++++++||||+||+||+||
T Consensus 90 i~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~YP~lqaaDil~~~~~~v~~G~DQ~~~~~l 169 (340)
T 2g36_A 90 IFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIEL 169 (340)
T ss_dssp EEEGGGCTHHHHHHHHHHTTSCHHHHHTCHHHHTC-------CCCSHHHHTHHHHHHHHHHTTTCSEEEECGGGHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 99701366778899999852015777753454210000145777653434475553102342257777663778999999
Q ss_pred HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999999876140110000012321113457431432234756430335677411132134554452001453889999
Q gi|254780794|r 162 TRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAK 241 (355)
Q Consensus 162 tRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~k 241 (355)
|||||+|||+.|+. .|++|++.+. ....++|++ ++|||||.+ |+|+|+|+|++|++
T Consensus 170 ~R~ia~k~n~~~~~------------------~~~~p~~~~~-~~~~l~~~~--g~KmSkS~~---~~I~l~D~~~~i~k 225 (340)
T 2g36_A 170 TREIARRFNYLYDE------------------VFPEPEAILS-RVPKLPGTD--GRKMSKSYG---NIINLEISEKELEQ 225 (340)
T ss_dssp HHHHHHHHHHHSCC------------------CCCCCEEEEC-CSCCCCCTT--SSCCCGGGT---CCCBTTCCHHHHHH
T ss_pred HHHHHHHHHHHCCC------------------CCCCCCCCCC-CCCCCCCCC--CCCCCCCCC---CCCEECCCHHHHHH
T ss_conf 99999987652033------------------4678631012-356789999--997888745---55520276578877
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98752001223346434556687634313311222-22528889998679998999899999999983379999999982
Q gi|254780794|r 242 KIQKAKTDGDVLPSEVSGLENRLEAKNLIEIFATM-RQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLK 320 (355)
Q Consensus 242 KI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~-~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l~~ 320 (355)
||++|+|||.......++.++.+++++++.+|... ...+..+..++.++++|++||+.|+|+++++|+|||+||++|++
T Consensus 226 KI~ka~td~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dlK~~lae~li~~L~pirek~~~l~~ 305 (340)
T 2g36_A 226 TILRMMTDPARVRRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDE 305 (340)
T ss_dssp HHHTCCCCTTCSSTTSCCCGGGCHHHHHHHHTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 65510469723404688875200599999860873778999998654179788999999999999997899999999983
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 79999999999999999999999999999828899
Q gi|254780794|r 321 DKSYLDTILVEGANRARCRAQETMKYVNEIVGLSH 355 (355)
Q Consensus 321 d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~y 355 (355)
|+++|++||++|++|||++|++||++||++|||.|
T Consensus 306 d~~~l~~iL~~GaekA~~~A~~tl~~v~~~~Gl~~ 340 (340)
T 2g36_A 306 DPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLMF 340 (340)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999999629799