HHsearch results for GI: 254780794 and protein with PDBid: 2g36_A

>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: TRP; 2.50A {Thermotoga maritima}
Probab=100.00  E-value=0  Score=633.52  Aligned_cols=327  Identities=31%  Similarity=0.472  Sum_probs=294.8

Q ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             888789601589678105579889999999850599589997311573078-9858999999999999996286811123
Q gi|254780794|r    4 SDNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN-IVQENLRYQSRLFVASFLAAGVDPSRNI   82 (355)
Q Consensus         4 ~~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~-~~~~~~~~~~~~~~~~~lA~Gldp~k~~   82 (355)
                      +.-||+||++|||.+|||||+|+|.+|+++|+++ +++++|||||||+|++ .++.++++++++++++|+|||+||+|++
T Consensus        11 ~~~ri~tG~~PTG~lHlG~~i~~i~~~~~lq~~g-~~~~~~iaD~ha~~~~~~~~~~~~~~~~~~~~~~~a~g~~p~k~~   89 (340)
T 2g36_A           11 HHMRILSGMRPTGKLHIGHLVGALENWVKLQEEG-NECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSV   89 (340)
T ss_dssp             -CCEEEEEECCCSSCBHHHHHTHHHHHHHHHHTT-CEEEEEECHHHHHHHHTTCCTTHHHHHHHHHHHHHHTTCCTTTSE
T ss_pred             CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEEECCHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf             4453665618897145887899999999999769-949999723010148999999999999999999998268987349


Q ss_pred             EEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHH-HHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHH
Q ss_conf             652474078899999985105367752012211233-2011101346641111466543565286601112121268999
Q gi|254780794|r   83 IFKQSDVGYHADLSWILSCVARMGWMNNMIQFKEKS-KENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQHLEI  161 (355)
Q Consensus        83 if~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~-~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~Hiel  161 (355)
                      ||+||++++|.++.|+++|.++++++.|+++||+.. .....+..++|+|+||+|||||||++++++||||+||+||+||
T Consensus        90 i~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~YP~lqaaDil~~~~~~v~~G~DQ~~~~~l  169 (340)
T 2g36_A           90 IFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEIKSELNYKDLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIEL  169 (340)
T ss_dssp             EEEGGGCTHHHHHHHHHHTTSCHHHHHTCHHHHTC-------CCCSHHHHTHHHHHHHHHHTTTCSEEEECGGGHHHHHH
T ss_pred             EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf             99701366778899999852015777753454210000145777653434475553102342257777663778999999


Q ss_pred             HHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999876140110000012321113457431432234756430335677411132134554452001453889999
Q gi|254780794|r  162 TRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAK  241 (355)
Q Consensus       162 tRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~k  241 (355)
                      |||||+|||+.|+.                  .|++|++.+. ....++|++  ++|||||.+   |+|+|+|+|++|++
T Consensus       170 ~R~ia~k~n~~~~~------------------~~~~p~~~~~-~~~~l~~~~--g~KmSkS~~---~~I~l~D~~~~i~k  225 (340)
T 2g36_A          170 TREIARRFNYLYDE------------------VFPEPEAILS-RVPKLPGTD--GRKMSKSYG---NIINLEISEKELEQ  225 (340)
T ss_dssp             HHHHHHHHHHHSCC------------------CCCCCEEEEC-CSCCCCCTT--SSCCCGGGT---CCCBTTCCHHHHHH
T ss_pred             HHHHHHHHHHHCCC------------------CCCCCCCCCC-CCCCCCCCC--CCCCCCCCC---CCCEECCCHHHHHH
T ss_conf             99999987652033------------------4678631012-356789999--997888745---55520276578877


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98752001223346434556687634313311222-22528889998679998999899999999983379999999982
Q gi|254780794|r  242 KIQKAKTDGDVLPSEVSGLENRLEAKNLIEIFATM-RQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLK  320 (355)
Q Consensus       242 KI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~-~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l~~  320 (355)
                      ||++|+|||.......++.++.+++++++.+|... ...+..+..++.++++|++||+.|+|+++++|+|||+||++|++
T Consensus       226 KI~ka~td~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dlK~~lae~li~~L~pirek~~~l~~  305 (340)
T 2g36_A          226 TILRMMTDPARVRRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDE  305 (340)
T ss_dssp             HHHTCCCCTTCSSTTSCCCGGGCHHHHHHHHTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             65510469723404688875200599999860873778999998654179788999999999999997899999999983


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             79999999999999999999999999999828899
Q gi|254780794|r  321 DKSYLDTILVEGANRARCRAQETMKYVNEIVGLSH  355 (355)
Q Consensus       321 d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~y  355 (355)
                      |+++|++||++|++|||++|++||++||++|||.|
T Consensus       306 d~~~l~~iL~~GaekA~~~A~~tl~~v~~~~Gl~~  340 (340)
T 2g36_A          306 DPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLMF  340 (340)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999999999999999999999629799