HHsearch results for GI: 254780794 and protein with PDBid: 3hv0_A

>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=0  Score=499.35  Aligned_cols=300  Identities=17%  Similarity=0.164  Sum_probs=255.3

Q ss_pred             CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC--CCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             88878960158967-8105579889999999850599589997311573078--98589999999999999962868111
Q gi|254780794|r    4 SDNLFVSGVQPTGV-LHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN--IVQENLRYQSRLFVASFLAAGVDPSR   80 (355)
Q Consensus         4 ~~~~vltG~~PtG~-~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~--~~~~~~~~~~~~~~~~~lA~Gldp~k   80 (355)
                      .+..|+||++|||. +|||||++.++.+ .+|+.+++.++++|||+||++++  .+.+++++++++++++|+|||+||+|
T Consensus        73 k~~~vytG~~PSg~~lHlGh~v~~~~~~-~~q~~~~~~v~i~iaD~~~~~~~~~~~~~e~~~~~~~~~~~~iA~G~dp~k  151 (393)
T 3hv0_A           73 ELFYLYTGRGPSSESLHVGHLVPFLFTK-YLQDTFKVPLVIQLTDDEKFIFKSNLTLEETHNYAYENMKDIIACGFDPEL  151 (393)
T ss_dssp             CCCEEEEEECCSSSSCBSTTHHHHHHHH-HHHHHHCCCEEEEECHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTCCCTTT
T ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHH-HHHHCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9838995706898433499999999999-998766987799984566520567899999999999999999971889764


Q ss_pred             CEEEECCC-HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCC-----------CC
Q ss_conf             23652474-0788999999851053677520122112332011101346641111466543565286-----------60
Q gi|254780794|r   81 NIIFKQSD-VGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRA-----------TH  148 (355)
Q Consensus        81 ~~if~QS~-v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a-----------~~  148 (355)
                      +++|.||+ ++++.++.|.+++.++++++.++        .++++++++|+|+||+|||||||++++           ++
T Consensus       152 t~i~~~s~~~~~~~~~~~~l~~~~t~~~~k~~--------~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~g~~~~~~~l  223 (393)
T 3hv0_A          152 TFIFTNLEYIAELYPDILRIEKKISCSQIKSI--------FGFKDSCNVGKFAFPAVQAAPAFSSSFPHIFGGRTDIHCL  223 (393)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHHHSBHHHHHHH--------HCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCSCCCEE
T ss_pred             EEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH--------HCCCCCCCCCCCCCCHHHHCHHHHCCCHHHHCCCCCCCCC
T ss_conf             39997848988899999999385737889877--------4467777664324533430003430544651676667662


Q ss_pred             EEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             11121212689999999999987614011000001232111345743143223475643033567741113213455445
Q gi|254780794|r  149 VPVGEDQRQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFS  228 (355)
Q Consensus       149 VpVG~DQ~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s  228 (355)
                      ||||.||+||+|||||||+|||..++..+                           .+..+|+|++++.|||||++  +|
T Consensus       224 vPvG~DQ~~hi~ltRdia~r~~~~~~~~~---------------------------~~~~lp~L~G~~~KMSsS~~--~s  274 (393)
T 3hv0_A          224 VPHAIDQDPYFRMVRDVAPRLGYLKPSSI---------------------------HSIFLPSLQGSQTKMSASVQ--NS  274 (393)
T ss_dssp             EEEEGGGHHHHHHHHHHTGGGTCCCCEEE---------------------------EECCCCC---------------CC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCEE---------------------------CCCCCCCCCCCCCCCCCCCC--CC
T ss_conf             50456489999999999998366676300---------------------------25544446786666667884--32


Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH--HHHHCCCCHHHHHHHHHH
Q ss_conf             2001453889999987520012233----4643455668763431331122222528889--998679998999899999
Q gi|254780794|r  229 RINLLDNPDIIAKKIQKAKTDGDVL----PSEVSGLENRLEAKNLIEIFATMRQIKIEEA--LKQFGGKNFSQFKLALAD  302 (355)
Q Consensus       229 ~I~l~D~~e~I~kKI~ka~TDs~~~----~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~--~~~~g~~~~gdlK~~Lae  302 (355)
                      +|+|+|+|++|++||++++||++..    +.+.+++++.|.++.|+.+|.. ++.+.+++  .|+.|+++||+||+.||+
T Consensus       275 ~I~L~D~~~~i~~KI~k~~~~~g~~t~~e~~~~~g~~~~~~~~~~l~~~~~-dd~~l~ei~~~y~~G~l~~gd~K~~lae  353 (393)
T 3hv0_A          275 SIFVNDNEESIRNKIMKYAFSGGQATEEEQRRLGANLDVDVSWQYLRFLME-DDEKLEEIGKKYSSGEMLSGEIKSILVQ  353 (393)
T ss_dssp             CCBTTCCHHHHHHHHHHHSCCCSCSSSCCC---CCCTTTCHHHHHHHHHCC-CHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred             CEECCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             013459868999987236517876645662125788047679999998669-8889999999997699899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999833799999999827999999999999999999999999999
Q gi|254780794|r  303 AVIEEIVPISQKIQHLLKDKSYLDTILVEGANRARCRAQETMKYVN  348 (355)
Q Consensus       303 ~I~~~L~PIRer~~~l~~d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr  348 (355)
                      .|+++|+|+||||+++.      ++++++|+++||+.|++++-+++
T Consensus       354 ~i~~~l~~~rekr~~~~------d~~l~~g~~kare~~~k~~~n~k  393 (393)
T 3hv0_A          354 ELVKLTKNHQKNREAIN------DDVIAKFTNKSREQLLKLFINKK  393 (393)
T ss_dssp             HHHHHHHHHHHHHHTCC------HHHHHHHHCCCCCCCCCC-----
T ss_pred             HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999789999999999------99999999999999999985259