PSIBLAST alignment of GI: 254780794 and protein with PDB id: 1r6u
>gi|40889612|pdb|1R6U|A Chain A, Crystal Structure Of An Active Fragment Of Human Tryptophanyl-Trna Synthetase With Cytokine Activity Length = 437
>gi|40889613|pdb|1R6U|B Chain B, Crystal Structure Of An Active Fragment Of Human Tryptophanyl-Trna Synthetase With Cytokine Activity Length = 437
Score = 74.0 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/355 (16%), Positives = 107/355 (30%), Gaps = 73/355 (20%)
Query: 3 SSDNLFV-SGVQPTGV-LHLGNYLGMIRNVI---RRQETCNHLGMYFIAD-----LHAIT 52
+ ++ +G P+ H+G+ + I Q+ N + D +T
Sbjct: 105 NKKPFYLYTGRGPSSEAXHVGH----LIPFIFTKWLQDVFNVPLVIQXTDDEKYLWKDLT 160
Query: 53 NNIVQENLRYQSRLFVASFLAAGVDPSRNIIFKQSDVGYHADLSWILSCVARMGWMNNMI 112
+ + +A G D ++ IF SD+ Y S V ++ ++
Sbjct: 161 LDQAYGDAVEN----AKDIIACGFDINKTFIF--SDLDYXGXSSGFYKNVVKIQK--HVT 212
Query: 113 QFKEKSKENKEETASLGLFMYPVLMAADILLYR-----------ATHVPVGEDQRQHLEI 161
+ K ++ +G +P + AA +P DQ +
Sbjct: 213 FNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRX 272
Query: 162 TRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSK 221
TR +A R Y + FFP +L+ A K S
Sbjct: 273 TRDVAPRI-------------GYPKPALLHSTFFP--------------ALQGAQTKXSA 305
Query: 222 SDSSDFSRINLLDNPDIIAKKIQK-AKTDGDVLPSEVSGLENRLEA----KNLIEIFATM 276
SD + S I L D I K+ K A + G E + L
Sbjct: 306 SDPN--SSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFXYLTFFLEDD 363
Query: 277 RQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLKDKSYLDTILVE 331
+++ G + K AL + + I + + + D I+ E
Sbjct: 364 DKLEQIRKDYTSGAXLTGELKKALIEVLQPLIAEHQARRKEVT------DEIVKE 412