RPSBLAST alignment for GI: 254780794 and conserved domain: TIGR00234
>gnl|CDD|161781 TIGR00234, tyrS, tyrosyl-tRNA synthetase. This tyrosyl-tRNA synthetase model starts picking up tryptophanyl-tRNA synthetases at scores of 0 and below. The proteins found by this model have a deep split between two groups. One group contains bacterial and organellar eukaryotic examples. The other contains archaeal and cytosolic eukaryotic examples. Length = 377
Score = 38.9 bits (91), Expect = 0.002
Identities = 59/323 (18%), Positives = 102/323 (31%), Gaps = 69/323 (21%)
Query: 8 FVSGVQPTGV-LHLGNYLGMIRNVIRRQETCNHLGMYFIADLHA--------------IT 52
G PT LHLG+ + + +R + H + + D A +T
Sbjct: 33 LYVGFDPTAPSLHLGHLVPL--LKLRDFQQAGHEVIVLLGDATALIGDPSGKSEERKLLT 90
Query: 53 NNIVQENLRYQSRLFVASFLAAGVDPSRNIIFKQSD-------VGYHADLSWILSCVARM 105
VQEN + +A +D + S+ + + DL I S V RM
Sbjct: 91 REEVQENAENIKK-----QIARFLDFEKAKFVNNSEWLLKLNYIDFIRDLGKIFS-VNRM 144
Query: 106 GWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADIL-LYRATHVPVGEDQRQHLEITRL 164
+ F + + SL F+YP+L A D + L + G DQ
Sbjct: 145 --LRRD-AFSSRLERG----ISLSEFIYPLLQAYDFVYLNVDLQIG-GSDQW-------- 188
Query: 165 IAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDS 224
N RK +++ ++ + P++ + +S +
Sbjct: 189 ----GNI---RKGRDLIRRNLPSLGFGL-TVPLLTPADGEKMGK-----SGGGAVSLDEG 235
Query: 225 SDFSRINLLDNPDIIAKKIQKAKTDGDV----LPSEVSGLENRLEAKNLIEIFATM---- 276
++ PD KKI K T + E+ G R +NL +
Sbjct: 236 KYDFYQFWINTPDEDVKKILKLFTFLGLEEIEALVELKGPSPREVKENLAKEITKYVHGE 295
Query: 277 -RQIKIEEALKQFGGKNFSQFKL 298
+ EE + + +L
Sbjct: 296 EAALAAEEISEAIFSGGLNPDEL 318