RPSBLAST alignment of GI: 254780794 and protein with PDBid: 3m5w
>3m5w_A Tryptophanyl-tRNA synthetase; alpha-beta structure, csgid, aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding; 2.32A {Campylobacter jejuni} Length = 322
Score = 276 bits (706), Expect = 6e-75
Identities = 111/345 (32%), Positives = 169/345 (48%), Gaps = 29/345 (8%)
Query: 9 VSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFV 68
++G+QP+G LH+GNY G I+ ++ QE FIA+ HA+T++ E L+ S
Sbjct: 7 LTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMF--MFIANYHAMTSSQDGEKLKQNSLKAA 64
Query: 69 ASFLAAGVDPSRNIIFKQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASL 128
A+FL+ G+DP +++ + QSDV +L WILS MG + +K+K + +AS
Sbjct: 65 AAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERAHSYKDKVAKG--LSASH 122
Query: 129 GLFMYPVLMAADILLYRATHVPVGEDQRQHLEITRLIAQRFNTEFERKIKEVAQKYAQEE 188
GLF YPVLMAADILL+ VPVG+DQ QH+EI R IA + N E+
Sbjct: 123 GLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEW--------------- 167
Query: 189 QYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAKKIQKAKT 248
F + E ++ + + KMSKS + I++ + + K+I T
Sbjct: 168 ---GEIFTLPEARVNEEVAVVVGTDG--AKMSKSYQN---TIDIFSSEKTLKKQISSIVT 219
Query: 249 DGDVLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEI 308
D L + ++F K + + GG+ + FK+ L + V
Sbjct: 220 DSTALEDP--KDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYF 277
Query: 309 VPISQKIQHLLKDKSYLDTILVEGANRARCRAQETMKYVNEIVGL 353
+K LL+ S+L IL GA +AR AQE M+ + E +GL
Sbjct: 278 KEAREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL 322