HHsearch alignment for GI: 254780795 and conserved domain: COG1718
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning].
Probab=98.73 E-value=4.2e-07 Score=65.61 Aligned_cols=157 Identities=18% Similarity=0.292 Sum_probs=92.3
Q ss_pred CCCCCCHHHHHHHHHHCCCCCEEEEEE-CCCCCEEEEEEEEECCCC-EEEEEECCC---------------------CCH
Q ss_conf 577089999999998489986053100-466812001799943995-899982166---------------------998
Q gi|254780795|r 3 VYTHPPQKEIQSFVQEYAIGQLNSVQP-IIHGVENSNFVIQTSKGT-FILTIYEKR---------------------MNE 59 (316)
Q Consensus 3 Vyt~ls~~el~~il~~y~lg~~~~~~~-i~~G~~Ntny~v~t~~~~-yiLri~e~~---------------------~~~ 59 (316)
T Consensus 31 v~D~~t~~~l~~L~~r---g~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~r 107 (268)
T COG1718 31 VFDKRTLETLRRLLSR---GVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNR 107 (268)
T ss_pred HHHHHHHHHHHHHHCC---CCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHCCHHHHCCCCCH
T ss_conf 5116899999998628---8601367620377414778731578753799997500355646888773264653478889
Q ss_pred HHH-----HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 899-----999999999853267755510010267787522451557864788707689989999999986436753068
Q gi|254780795|r 60 KDL-----PVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKN 134 (316)
Q Consensus 60 ~~l-----~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~ 134 (316)
T Consensus 108 r~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~n----------VLvMEfIg~~g~pAP~-----------------LkD 160 (268)
T COG1718 108 RKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRNN----------VLVMEFIGDDGLPAPR-----------------LKD 160 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCC----------EEEEEECCCCCCCCCC-----------------CCC
T ss_conf 9999999999999999999759999986100377----------5899831677887987-----------------334
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 75433231124564576675200155227889999999888765210777444022346422562796048731621356
Q gi|254780795|r 135 FHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 135 f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 161 v~~e------~~---------------e~~~~~~~~v~~~~~l-~~--~a~LVHgDLSEyNiL~~~~~p~-iID~~QaV~ 215 (268)
T COG1718 161 VPLE------LE---------------EAEGLYEDVVEYMRRL-YK--EAGLVHGDLSEYNILVHDGEPY-IIDVSQAVT 215 (268)
T ss_pred CCCC------CH---------------HHHHHHHHHHHHHHHH-HH--HCCCCCCCCHHHEEEEECCEEE-EEECCCCCC
T ss_conf 7877------15---------------5899999999999999-98--6294113532350677799079-998832214