HHsearch alignment for GI: 254780795 and conserved domain: COG3231

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis].
Probab=99.23  E-value=3.8e-10  Score=85.31  Aligned_cols=218  Identities=15%  Similarity=0.101  Sum_probs=135.3

Q ss_pred             EEEEEEECCCC-EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCC--
Q ss_conf             01799943995-899982166998899999999999853267755510010267787522451557864788707689--
Q gi|254780795|r   37 SNFVIQTSKGT-FILTIYEKRMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKGSPLNHI--  113 (316)
Q Consensus        37 tny~v~t~~~~-yiLri~e~~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~--  113 (316)
T Consensus        34 ~v~rl~a~~r~g~~~k~~-~~~~~a~L~~Ea~RlrWla~~~l~~P~V~~~~------~~~~~~wLl~salpG~~~s~~~~  106 (266)
T COG3231          34 GVFRLFADSRPGLYLKIA-SSGPAAELEGEAARLRWLAGQGLGCPRVLGLE------DDADQAWLLMSALPGEDASHPRY  106 (266)
T ss_pred             EEEEEECCCCCCEEEEEE-CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEC------CCCCHHHHHHHHCCCCCCCCHHH
T ss_conf             578975067871699972-37624445648999877511379997257631------57646577664058976436131


Q ss_pred             --CH-HHHHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHHH-HHH---CCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             --98-99999999864367530-6875433231124564576675-200---1552278899999998887652107774
Q gi|254780795|r  114 --SD-IHCEEIGSMLASMHQKT-KNFHLYRKNTLSPLNLKFLWAK-CFD---KVDEDLKKEIDHEFCFLKESWPKNLPTG  185 (316)
Q Consensus       114 --~~-~~~~~lG~~La~lH~~~-~~f~~~r~~~~~~~~~~~~~~~-~~~---~~~~~~~~~l~~~l~~~~~~~~~~Lp~g  185 (316)
T Consensus       107 ~~~p~r~v~~la~aLR~LH~l~~~aCPFd~rl~~rl~~a~~r~~a~~vdesdfd~e~qgr~~~El~d~L~~~rp~~edLV  186 (266)
T COG3231         107 ALDPKRAVPLLAEALRRLHELPVEACPFDRRLARRLAKARARVRAGLVDESDFDEERQGRTAEELFDELEARRPAVEDLV  186 (266)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCHHHHHHHHHHCCCCHHHCE
T ss_conf             07999999999999999842982008951489999999999875157884442744328877999999985188412115


Q ss_pred             EEECCCCCCCEEECCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             44022346422562796048731621356800019899998643116888787889999988764188998999999999
Q gi|254780795|r  186 IIHADLFPDNVLFYNNKIMGLIDFYFSCNDFLMYDLSICINAWCFDENNTYNPSRGFSILNGYNKVRKISENELQSLPTL  265 (316)
Q Consensus       186 ~IHgDl~~~NiL~~~~~i~giIDF~~~~~~~~i~DLAi~i~~~c~~~~~~~d~~~~~~~l~gY~~vrpLs~~E~~~l~~l  265 (316)
T Consensus       187 v~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s--~~~nl~-g~~~~~~fl~~Yg~--~~~d~~rl~~yr~  261 (266)
T COG3231         187 VTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWS--LRFNLG-GDVWDDPFLDAYGR--GAIDPARLAYYRL  261 (266)
T ss_pred             EECCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHH--HHHCCC-CCHHHHHHHHHHCC--CCCCHHHHHHHHH
T ss_conf             631764576567528715776651765514777868999999--875058-20666799997386--7898788999999


Q ss_pred             H
Q ss_conf             9
Q gi|254780795|r  266 L  266 (316)
Q Consensus       266 l  266 (316)
T Consensus       262 l  262 (266)
T COG3231         262 L  262 (266)
T ss_pred             H
T ss_conf             8