HHsearch alignment for GI: 254780795 and conserved domain: PTZ00263
>PTZ00263 protein kinase A catalytic subunit; Provisional.
Probab=97.70 E-value=0.00069 Score=44.78 Aligned_cols=145 Identities=19% Similarity=0.216 Sum_probs=77.9
Q ss_pred CCCCCEEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCCC--CHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
Q ss_conf 89986053100466812001799943-99-58999821669--988---9999999999985326775551001026778
Q gi|254780795|r 19 YAIGQLNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKRM--NEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLY 91 (316)
Q Consensus 19 y~lg~~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~--~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~ 91 (316)
T Consensus 15 ~~l~dyei~~~LG~G~fG~V~~a~~k~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H-----p~Iv~l~~---~ 86 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH-----PFIVNMMC---S 86 (329)
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---E
T ss_conf 654063898897327380999999989998999999837884598999999999999997799-----89890999---9
Q ss_pred HHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 75224515578647887076899899999999864367530687543323112456457667520015522788999999
Q gi|254780795|r 92 GFLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEF 171 (316)
Q Consensus 92 ~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (316)
T Consensus 87 f~~~~~lylvmEy~~gGdL~--------------~~l~~~-~~l~--------e~~a~------------~~~~qi~~aL 131 (329)
T PTZ00263 87 FQDENRVYFLLEFVVGGELF--------------THLRKA-GRFP--------NDVAK------------FYHAELVLAF 131 (329)
T ss_pred EEECCEEEEEEECCCCCCHH--------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHH
T ss_conf 99899999999868998589--------------999764-8999--------99999------------9999999999
Q ss_pred HHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 988876521077744402234642256279604873162135
Q gi|254780795|r 172 CFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 172 ~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 132 ~yLH~-------~~IiHRDLKPeNILl~~~g~vKL~DFGlak 166 (329)
T PTZ00263 132 EYLHS-------KDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred HHHHH-------CCCEECCCCCCCEEECCCCCEEECCHHHHH
T ss_conf 99997-------888604335432467479988623405542