HHsearch alignment for GI: 254780795 and conserved domain: PTZ00296

>PTZ00296 choline kinase; Provisional.
Probab=99.68  E-value=7e-14  Score=109.47  Aligned_cols=244  Identities=18%  Similarity=0.219  Sum_probs=141.9

Q ss_pred             EEEEECCCCCEEEEEEEEECC----------CCEEEEEECCCCCHH-HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf             531004668120017999439----------958999821669988-999999999998532677555100102677875
Q gi|254780795|r   25 NSVQPIIHGVENSNFVIQTSK----------GTFILTIYEKRMNEK-DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGF   93 (316)
Q Consensus        25 ~~~~~i~~G~~Ntny~v~t~~----------~~yiLri~e~~~~~~-~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~   93 (316)
T Consensus       106 ~~v~qi~~gltnqlf~v~~~~~~~~~~~~~~~kVLvRIYG~~td~fiDR~~E~~vF~lLSe~glG-PKLyG--------~  176 (439)
T PTZ00296        106 LCVKQILSGLTNQLFEVGIKEDTAIEYHIIRRHVLFRIYGKDVDALYNPISEFEVYKTMSKYKIA-PLLLN--------T  176 (439)
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCC-CEEEE--------E
T ss_conf             33999874213522899863144545654015489997369955476728999999999867999-80799--------8


Q ss_pred             HCCCCEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC------HHHHHHHHHHHHHC--CCHH
Q ss_conf             2245155786478870768---99899999999864367530687543323112------45645766752001--5522
Q gi|254780795|r   94 LCKKPANIFSFIKGSPLNH---ISDIHCEEIGSMLASMHQKTKNFHLYRKNTLS------PLNLKFLWAKCFDK--VDED  162 (316)
Q Consensus        94 ~~~k~~~L~~~i~G~~~~~---~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~------~~~~~~~~~~~~~~--~~~~  162 (316)
T Consensus       177 Fpn--GRIEEFI~grtLtt~dLrdP~IS~~IA~kLaefH~l~~p~~~p~~wdr~p~l~~~m~kW~~~l~~~~~~~~~~~d  254 (439)
T PTZ00296        177 FDG--GRIEEWLYGDPLRIDDLKNKSILIGIANVLGKFHTLSRKRHLPEHWDKTPCIFKMMDKWKLALSKYKNIDKVKLD  254 (439)
T ss_pred             CCC--CEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
T ss_conf             389--567874078427967856988999999999997387665678987654235999999999984214544320021


Q ss_pred             HHHHH---HHHHHHHH--HH-HHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCC-
Q ss_conf             78899---99999888--76-5210777444022346422562796048731621356800019899998643116888-
Q gi|254780795|r  163 LKKEI---DHEFCFLK--ES-WPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCNDFLMYDLSICINAWCFDENNT-  235 (316)
Q Consensus       163 ~~~~l---~~~l~~~~--~~-~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~~~~i~DLAi~i~~~c~~~~~~-  235 (316)
T Consensus       255 l~~~~~e~e~~~~~l~l~s~l~~~~~~vvFCHNDL~~~NIl~~~~~l~-~IDfEY~~yNy~~fDIaNHFcE~~~dY~~~~  333 (439)
T PTZ00296        255 IHKYIKESEKFIKFIKIYSKIDNIANAIVFCHNDLQENNIINTNKCLR-LIDFEYSGFNFLAADIANFFIETSIDYSVNA  333 (439)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEE-EEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             877777899999999998641255687355413253023535888479-9985035667214568888776511468889


Q ss_pred             -----------CCHHHHHHHHHHHHHC------CCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf             -----------7878899999887641------889989999999999---9999999999999876
Q gi|254780795|r  236 -----------YNPSRGFSILNGYNKV------RKISENELQSLPTLL---RGAALRFFLTRLYDSQ  282 (316)
Q Consensus       236 -----------~d~~~~~~~l~gY~~v------rpLs~~E~~~l~~ll---~~aalRf~lsrl~d~~  282 (316)
T Consensus       334 ~P~f~~d~~~YPs~e~q~~Fi~~YL~~~~~~~~~~~~~~~ve~ll~eVe~faLaSHLfWg--lWsII  398 (439)
T PTZ00296        334 YPFFIIDKKKYISYENRILFITAYLSKYLDDSLAAPDPDIIDQFLEAIEVQALGAHLIWA--FWSII  398 (439)
T ss_pred             CCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf             985202701196989999999999987506678899889999999999998898899999--99998