HHsearch alignment for GI: 254780795 and conserved domain: PTZ00296
>PTZ00296 choline kinase; Provisional.
Probab=99.68 E-value=7e-14 Score=109.47 Aligned_cols=244 Identities=18% Similarity=0.219 Sum_probs=141.9
Q ss_pred EEEEECCCCCEEEEEEEEECC----------CCEEEEEECCCCCHH-HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 531004668120017999439----------958999821669988-999999999998532677555100102677875
Q gi|254780795|r 25 NSVQPIIHGVENSNFVIQTSK----------GTFILTIYEKRMNEK-DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGF 93 (316)
Q Consensus 25 ~~~~~i~~G~~Ntny~v~t~~----------~~yiLri~e~~~~~~-~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~ 93 (316)
T Consensus 106 ~~v~qi~~gltnqlf~v~~~~~~~~~~~~~~~kVLvRIYG~~td~fiDR~~E~~vF~lLSe~glG-PKLyG--------~ 176 (439)
T PTZ00296 106 LCVKQILSGLTNQLFEVGIKEDTAIEYHIIRRHVLFRIYGKDVDALYNPISEFEVYKTMSKYKIA-PLLLN--------T 176 (439)
T ss_pred HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCC-CEEEE--------E
T ss_conf 33999874213522899863144545654015489997369955476728999999999867999-80799--------8
Q ss_pred HCCCCEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC------HHHHHHHHHHHHHC--CCHH
Q ss_conf 2245155786478870768---99899999999864367530687543323112------45645766752001--5522
Q gi|254780795|r 94 LCKKPANIFSFIKGSPLNH---ISDIHCEEIGSMLASMHQKTKNFHLYRKNTLS------PLNLKFLWAKCFDK--VDED 162 (316)
Q Consensus 94 ~~~k~~~L~~~i~G~~~~~---~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~------~~~~~~~~~~~~~~--~~~~ 162 (316)
T Consensus 177 Fpn--GRIEEFI~grtLtt~dLrdP~IS~~IA~kLaefH~l~~p~~~p~~wdr~p~l~~~m~kW~~~l~~~~~~~~~~~d 254 (439)
T PTZ00296 177 FDG--GRIEEWLYGDPLRIDDLKNKSILIGIANVLGKFHTLSRKRHLPEHWDKTPCIFKMMDKWKLALSKYKNIDKVKLD 254 (439)
T ss_pred CCC--CEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCC
T ss_conf 389--567874078427967856988999999999997387665678987654235999999999984214544320021
Q ss_pred HHHHH---HHHHHHHH--HH-HHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCC-
Q ss_conf 78899---99999888--76-5210777444022346422562796048731621356800019899998643116888-
Q gi|254780795|r 163 LKKEI---DHEFCFLK--ES-WPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCNDFLMYDLSICINAWCFDENNT- 235 (316)
Q Consensus 163 ~~~~l---~~~l~~~~--~~-~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~~~~i~DLAi~i~~~c~~~~~~- 235 (316)
T Consensus 255 l~~~~~e~e~~~~~l~l~s~l~~~~~~vvFCHNDL~~~NIl~~~~~l~-~IDfEY~~yNy~~fDIaNHFcE~~~dY~~~~ 333 (439)
T PTZ00296 255 IHKYIKESEKFIKFIKIYSKIDNIANAIVFCHNDLQENNIINTNKCLR-LIDFEYSGFNFLAADIANFFIETSIDYSVNA 333 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEE-EEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 877777899999999998641255687355413253023535888479-9985035667214568888776511468889
Q ss_pred -----------CCHHHHHHHHHHHHHC------CCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf -----------7878899999887641------889989999999999---9999999999999876
Q gi|254780795|r 236 -----------YNPSRGFSILNGYNKV------RKISENELQSLPTLL---RGAALRFFLTRLYDSQ 282 (316)
Q Consensus 236 -----------~d~~~~~~~l~gY~~v------rpLs~~E~~~l~~ll---~~aalRf~lsrl~d~~ 282 (316)
T Consensus 334 ~P~f~~d~~~YPs~e~q~~Fi~~YL~~~~~~~~~~~~~~~ve~ll~eVe~faLaSHLfWg--lWsII 398 (439)
T PTZ00296 334 YPFFIIDKKKYISYENRILFITAYLSKYLDDSLAAPDPDIIDQFLEAIEVQALGAHLIWA--FWSII 398 (439)
T ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf 985202701196989999999999987506678899889999999999998898899999--99998