HHsearch alignment for GI: 254780795 and conserved domain: TIGR01982
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase; InterPro: IPR010232 This entry represents the enzyme (UbiB) which catalyses the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria , . The gene is also known as AarF in certain species. It is believed that the reaction converts 2-polyprenylphenol to 6-hydroxy-2-polyprenylphenol. Members are mainly proteobacteria.; GO: 0006744 ubiquinone biosynthetic process.
Probab=96.72 E-value=0.0022 Score=41.56 Aligned_cols=47 Identities=26% Similarity=0.409 Sum_probs=31.9
Q ss_pred CCCCCEEECCCCCCCEEECCC----CCEEEECCCCCCC---CHHHCCHHHHHHHH
Q ss_conf 077744402234642256279----6048731621356---80001989999864
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNN----KIMGLIDFYFSCN---DFLMYDLSICINAW 228 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~----~i~giIDF~~~~~---~~~i~DLAi~i~~~ 228 (316)
T Consensus 284 v~rDGfFHAD~HpGNI~v~~d~~~Ng~i~~~DFGIVG~l~~~~r~~-LAE~l~Gf 337 (452)
T TIGR01982 284 VLRDGFFHADLHPGNIFVLKDPERNGKIIALDFGIVGRLSEEDRRY-LAEILYGF 337 (452)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH-HHHHHHHH
T ss_conf 9971588788475663324787768808998537420013788999-99999999