HHsearch alignment for GI: 254780795 and conserved domain: TIGR02172
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172.
Probab=99.24 E-value=2.7e-10 Score=86.24 Aligned_cols=208 Identities=18% Similarity=0.245 Sum_probs=133.7
Q ss_pred CCCCCEEEEEEEEECCCC-EEEEEECC-CC-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC--CCEEEEEC
Q ss_conf 466812001799943995-89998216-69-988999999999998532677555100102677875224--51557864
Q gi|254780795|r 30 IIHGVENSNFVIQTSKGT-FILTIYEK-RM-NEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCK--KPANIFSF 104 (316)
Q Consensus 30 i~~G~~Ntny~v~t~~~~-yiLri~e~-~~-~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~--k~~~L~~~ 104 (316)
T Consensus 9 ~GEG~~~~~Y~--hk~~~~~~lKL~~P~~~s~~~~~~~E~~~sr~~~~LGipTP~~~~------lV~~g~sGR~G~~YE~ 80 (234)
T TIGR02172 9 TGEGANGESYT--HKTGKDILLKLYNPGECSDKETIKREFDASRKVFSLGIPTPKPID------LVEDGDSGRLGLIYEL 80 (234)
T ss_pred HCCCCCCCCCC--CCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCEE------EEEECCCCCCCEEEEE
T ss_conf 14773214531--788863254417689988889999998862104531688885347------7876687641117888
Q ss_pred CCCC-CCC---CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHH
Q ss_conf 7887-076---8998999999998643675306875433231124564576675200---15522788999999988876
Q gi|254780795|r 105 IKGS-PLN---HISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFD---KVDEDLKKEIDHEFCFLKES 177 (316)
Q Consensus 105 i~G~-~~~---~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~ 177 (316)
T Consensus 81 I~gKrSfSRiis~~P~~L~E~~k~fAe~akkLH~~~c---dt~~f~s~ke~~~~~i~ek~fvp~~~k~~~~a~i~----~ 153 (234)
T TIGR02172 81 IKGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKC---DTSKFQSYKEKIRKFIEEKDFVPDDYKEKARAFIE----E 153 (234)
T ss_pred EECCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH----H
T ss_conf 7175444233158832278999999987687468668---98766457899875103321573368999999986----2
Q ss_pred HHHCCCCCEEECCCCCCCEEECCCC--CEEEECCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 5210777444022346422562796--04873162135680001989999864311688878788999998876418899
Q gi|254780795|r 178 WPKNLPTGIIHADLFPDNVLFYNNK--IMGLIDFYFSCNDFLMYDLSICINAWCFDENNTYNPSRGFSILNGYNKVRKIS 255 (316)
Q Consensus 178 ~~~~Lp~g~IHgDl~~~NiL~~~~~--i~giIDF~~~~~~~~i~DLAi~i~~~c~~~~~~~d~~~~~~~l~gY~~vrpLs 255 (316)
T Consensus 154 vPd~--~tCLHGD~Q~GN~I~~g~~G~~y-WIDlG~FgyG~P~fDlg~~---f~~~--~~~~~~k------~~~~~FHM~ 219 (234)
T TIGR02172 154 VPDT--KTCLHGDLQIGNLITSGKGGKTY-WIDLGDFGYGSPLFDLGLL---FMFC--NVLDDDK------ALQAIFHMN 219 (234)
T ss_pred CCCC--CCCEECCCCCCCEEEECCCCCCC-EEECCCCCCCCHHHHHHHH---HHHH--CCCCCCH------HHHHHHCCC
T ss_conf 6898--88310123544168828988411-4565775779766899999---9985--5687223------579985167
Q ss_pred HHHHHH-HHHHH
Q ss_conf 899999-99999
Q gi|254780795|r 256 ENELQS-LPTLL 266 (316)
Q Consensus 256 ~~E~~~-l~~ll 266 (316)
T Consensus 220 ~~~l~~~Wn~F~ 231 (234)
T TIGR02172 220 EEQLKAHWNIFA 231 (234)
T ss_pred HHHHHHHHHHHH
T ss_conf 889888877763