HHsearch alignment for GI: 254780795 and conserved domain: cd00192
>cd00192 PTKc Catalytic Domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.11 E-value=0.02 Score=35.31 Aligned_cols=142 Identities=16% Similarity=0.206 Sum_probs=69.1
Q ss_pred CCCCCEEEEEEEE--ECC--C-CEEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 4668120017999--439--9-58999821669988---99999999999853267755510010267787522451557
Q gi|254780795|r 30 IIHGVENSNFVIQ--TSK--G-TFILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 30 i~~G~~Ntny~v~--t~~--~-~yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 3 iG~G~fg~V~~a~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~~~-g--~~~~~~~~~iv 74 (261)
T cd00192 3 LGEGAFGEVYKGELKGKGGKKTPVAVKTLKEDASDSEREDFLKEAKIMKKLGH-----PNIVRLL-G--VCTEEEPLYLV 74 (261)
T ss_pred CCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCEEEEE-E--EEEECCEEEEE
T ss_conf 87488828999999779972599999998932799999999999999986899-----8884287-8--99679988999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN 181 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 181 (316)
T Consensus 75 ~Ey~~~GsL~~-----------~---l~~~~~~~-~~~~~~l~~---~~~~---------~~~~qia~gl~yLH~----- 122 (261)
T cd00192 75 LEYMEGGDLLD-----------F---LRKSRPVF-SPESSTLSL---KDLL---------SFAYQIASGMEYLAS----- 122 (261)
T ss_pred EEECCCCCHHH-----------H---HHHCCCCC-CCCCCCCCH---HHHH---------HHHHHHHHHHHHHHH-----
T ss_conf 98069995999-----------9---98635554-444688999---9999---------999999999999976-----
Q ss_pred CCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 77744402234642256279604873162135
Q gi|254780795|r 182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 123 --~~iiHrDiKp~NILl~~~~~~Kl~DFGls~ 152 (261)
T cd00192 123 --KNFVHRDLAARNVLVGEDLVVKIADFGLSR 152 (261)
T ss_pred --CCCCCCCCCHHHEEECCCCCEEEEECCCCE
T ss_conf --995578776787898799968992165765