HHsearch alignment for GI: 254780795 and conserved domain: cd05033

>cd05033 PTKc_EphR Catalytic Domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=93.65  E-value=0.58  Score=25.86  Aligned_cols=136  Identities=18%  Similarity=0.227  Sum_probs=67.9

Q ss_pred             ECCCCCEEEEEEEEEC-CC----CEEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf             0466812001799943-99----58999821669988---9999999999985326775551001026778752245155
Q gi|254780795|r   29 PIIHGVENSNFVIQTS-KG----TFILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN  100 (316)
Q Consensus        29 ~i~~G~~Ntny~v~t~-~~----~yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~  100 (316)
T Consensus        11 ~IG~G~fg~Vy~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~f~~E~~~l~~l~H-----pnIv~l~-g~--~~~~~~~~l   82 (266)
T cd05033          11 VIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH-----PNIIRLE-GV--VTKSRPVMI   82 (266)
T ss_pred             EEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCEEEEE-EE--EEECCEEEE
T ss_conf             993076839999999279965079999998865797899999999999984899-----7881199-99--968999999


Q ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r  101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK  180 (316)
Q Consensus       101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  180 (316)
T Consensus        83 V~Ey~~~GsL~~-----------~---L~~~~~~l--------~---~~~~~---------~i~~~ia~gl~yLH~----  124 (266)
T cd05033          83 ITEYMENGSLDK-----------F---LRENDGKF--------T---VGQLV---------GMLRGIASGMKYLSE----  124 (266)
T ss_pred             EEECCCCCCHHH-----------H---HHHCCCCC--------C---HHHHH---------HHHHHHHHHHHHHHH----
T ss_conf             998589996999-----------9---97278999--------9---99999---------999999999998855----


Q ss_pred             CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             077744402234642256279604873162135
Q gi|254780795|r  181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       125 ---~~ivHrDlK~~NILl~~~~~~Kl~DFGls~  154 (266)
T cd05033         125 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             ---CCEECCCCCCCEEEECCCCCEEEEECCCCE
T ss_conf             ---888705567213778799988996567775