HHsearch alignment for GI: 254780795 and conserved domain: cd05060

>cd05060 PTKc_Syk_like Catalytic Domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=96.67  E-value=0.057  Score=32.35  Aligned_cols=133  Identities=17%  Similarity=0.207  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEEE--EECCCC---EEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf             466812001799--943995---89998216699---8899999999999853267755510010267787522451557
Q gi|254780795|r   30 IIHGVENSNFVI--QTSKGT---FILTIYEKRMN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI  101 (316)
Q Consensus        30 i~~G~~Ntny~v--~t~~~~---yiLri~e~~~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L  101 (316)
T Consensus         3 iG~G~fg~Vy~g~~~~~~~~~~~VAiK~~~~~~~~~~~~~f~~E~~~l~~l~-----HpnIv~~~-g~---~~~~~~~lV   73 (257)
T cd05060           3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD-----HPCIVRLI-GV---CKGEPLMLV   73 (257)
T ss_pred             CCCCCCCEEEEEEEECCCCEEEEEEEEEECHHHCHHHHHHHHHHHHHHHHCC-----CCCEEEEE-EE---EECCCEEEE
T ss_conf             8558885899899986898489999999882218678999999999998679-----99884264-18---936936999


Q ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r  102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN  181 (316)
Q Consensus       102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  181 (316)
T Consensus        74 ~Ey~~~G~L~~-----------~l---~~~-~~~--------~~---~~~~---------~~~~qia~gl~yLH~-----  113 (257)
T cd05060          74 MELAPLGPLLK-----------YL---KKR-REI--------PV---SDLK---------ELAHQVAMGMAYLES-----  113 (257)
T ss_pred             EECCCCCCHHH-----------HH---HHC-CCC--------CH---HHHH---------HHHHHHHHHHHHHHH-----
T ss_conf             98689999999-----------99---867-999--------99---9999---------999999999999986-----


Q ss_pred             CCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             77744402234642256279604873162135
Q gi|254780795|r  182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       114 --~~ivHrDlK~~NiLl~~~~~vKl~DFGls~  143 (257)
T cd05060         114 --KHFVHRDLAARNVLLVNRHQAKISDFGMSR  143 (257)
T ss_pred             --CCEEECCCCCCCEEECCCCCEEEEECCCCE
T ss_conf             --995616567042578689978884140320