HHsearch alignment for GI: 254780795 and conserved domain: cd05060
>cd05060 PTKc_Syk_like Catalytic Domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=96.67 E-value=0.057 Score=32.35 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEE--EECCCC---EEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 466812001799--943995---89998216699---8899999999999853267755510010267787522451557
Q gi|254780795|r 30 IIHGVENSNFVI--QTSKGT---FILTIYEKRMN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 30 i~~G~~Ntny~v--~t~~~~---yiLri~e~~~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 3 iG~G~fg~Vy~g~~~~~~~~~~~VAiK~~~~~~~~~~~~~f~~E~~~l~~l~-----HpnIv~~~-g~---~~~~~~~lV 73 (257)
T cd05060 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD-----HPCIVRLI-GV---CKGEPLMLV 73 (257)
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEEECHHHCHHHHHHHHHHHHHHHHCC-----CCCEEEEE-EE---EECCCEEEE
T ss_conf 8558885899899986898489999999882218678999999999998679-----99884264-18---936936999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN 181 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 181 (316)
T Consensus 74 ~Ey~~~G~L~~-----------~l---~~~-~~~--------~~---~~~~---------~~~~qia~gl~yLH~----- 113 (257)
T cd05060 74 MELAPLGPLLK-----------YL---KKR-REI--------PV---SDLK---------ELAHQVAMGMAYLES----- 113 (257)
T ss_pred EECCCCCCHHH-----------HH---HHC-CCC--------CH---HHHH---------HHHHHHHHHHHHHHH-----
T ss_conf 98689999999-----------99---867-999--------99---9999---------999999999999986-----
Q ss_pred CCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 77744402234642256279604873162135
Q gi|254780795|r 182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 114 --~~ivHrDlK~~NiLl~~~~~vKl~DFGls~ 143 (257)
T cd05060 114 --KHFVHRDLAARNVLLVNRHQAKISDFGMSR 143 (257)
T ss_pred --CCEEECCCCCCCEEECCCCCEEEEECCCCE
T ss_conf --995616567042578689978884140320