HHsearch alignment for GI: 254780795 and conserved domain: cd05063
>cd05063 PTKc_EphR_A2 Catalytic Domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.30 E-value=0.096 Score=30.90 Aligned_cols=137 Identities=19% Similarity=0.221 Sum_probs=71.9
Q ss_pred EECCCCCEEEEEEEEE-CCCC----EEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 0046681200179994-3995----8999821669988---999999999998532677555100102677875224515
Q gi|254780795|r 28 QPIIHGVENSNFVIQT-SKGT----FILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t-~~~~----yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 11 ~~iG~G~fG~Vykg~~~~~g~~~~~vavK~l~~~~~~~~~~~f~~E~~~l~~l~H~nI-----v~~-~g--~~~~~~~~~ 82 (268)
T cd05063 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI-----IRL-EG--VVTKFKPAM 82 (268)
T ss_pred EEEEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC-----CCE-EE--EEEECCEEE
T ss_conf 6983278839999999889976689999994767798999999999999986689789-----735-07--998899889
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 83 iv~Ey~~~G~L~~~--------------L~~~--------~~~~~~---~~~---------~~~~~~ia~gL~yLH~--- 125 (268)
T cd05063 83 IITEYMENGALDKY--------------LRDH--------DGEFSS---YQL---------VGMLRGIAAGMKYLSD--- 125 (268)
T ss_pred EEEECCCCCCHHHH--------------HHHC--------CCCCCH---HHH---------HHHHHHHHHHHHHHHH---
T ss_conf 99982898979997--------------6402--------789999---999---------9999999999999832---
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 126 ----~~iiHrDlK~~NILld~~~~~Kl~DFGls~ 155 (268)
T cd05063 126 ----MNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred ----CCEECCCCCCCEEEECCCCCEEECCCCCCE
T ss_conf ----998755347550788899988982376554