>cd05085 PTKc_Fer Catalytic Domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

Probab=97.36 E-value=0.0094 Score=37.44 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=68.0 Q ss_pred CCCEEEEEEEEECCC-CEEEEEECCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC Q ss_conf 681200179994399-589998216699889---9999999999853267755510010267787522451557864788 Q gi|254780795|r 32 HGVENSNFVIQTSKG-TFILTIYEKRMNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKG 107 (316) Q Consensus 32 ~G~~Ntny~v~t~~~-~yiLri~e~~~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G 107 (316) T Consensus 5 ~G~fg~Vy~g~~~~~~~VAvK~~~~~~~~~~~~~f~~E~~il~~l~-----HpnIv~l~-g--~~~~~~~~~iv~Ey~~~ 76 (250) T cd05085 5 KGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD-----HPNIVKLI-G--VCTQRQPIYIVMELVPG 76 (250) T ss_pred ECCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC-----CCCEEEEE-E--EEEECCEEEEEEECCCC T ss_conf 0899389999988999999999894378689999999999998679-----99983199-9--99889989999975899 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE Q ss_conf 70768998999999998643675306875433231124564576675200155227889999999888765210777444 Q gi|254780795|r 108 SPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTGII 187 (316) Q Consensus 108 ~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g~I 187 (316) T Consensus 77 g~L~~--------------~l~~~--------~~~l~---~~~~---------~~~~~~ia~gl~yLH~-------~~ii 115 (250) T cd05085 77 GDFLS--------------FLRKK--------KDELK---TKQL---------VKFALDAAAGMAYLES-------KNCI 115 (250) T ss_pred CCHHH--------------HHHHC--------CCCCC---HHHH---------HHHHHHHHHHHHHHHH-------CCCC T ss_conf 82899--------------99746--------89999---9999---------9999999999999842-------9964 Q ss_pred ECCCCCCCEEECCCCCEEEECCCCCC Q ss_conf 02234642256279604873162135 Q gi|254780795|r 188 HADLFPDNVLFYNNKIMGLIDFYFSC 213 (316) Q Consensus 188 HgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316) T Consensus 116 HrDlK~~NiLv~~~~~~Kl~DFGls~ 141 (250) T cd05085 116 HRDLAARNCLVGENNVLKISDFGMSR 141 (250) T ss_pred CCCCCCCCEEECCCCCEEEEECCCCE T ss_conf 47537463668899968999667788

HHsearch alignment for GI: 254780795 and conserved domain: cd05085