HHsearch alignment for GI: 254780795 and conserved domain: cd05088
>cd05088 PTKc_Tie2 Catalytic Domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=96.74 E-value=0.051 Score=32.66 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=70.5
Q ss_pred EECCCCCEEEEEEEEECC-CC-E--EEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 004668120017999439-95-8--999821669988---9999999999985326775551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQTSK-GT-F--ILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t~~-~~-y--iLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 13 ~~IG~G~fG~Vyk~~~~~~g~~~~vavK~~~~~~~~~~~~~f~~E~~il~~l~~H----pnIv~l~-g--~~~~~~~~~l 85 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH----PNIINLL-G--ACEHRGYLYL 85 (303)
T ss_pred EEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC----CCEEEEE-E--EEEECCEEEE
T ss_conf 7995077849999999389979999999978444847899999999999862699----9888898-8--9832897899
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522----78899999998887
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDED----LKKEIDHEFCFLKE 176 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~ 176 (316)
T Consensus 86 v~Ey~~~G~L~~--------------~l~~~-~~~~~--~~~~------~~~~~~~~~l~~~~~l~i~~qIa~gl~yLH- 141 (303)
T cd05088 86 AIEYAPHGNLLD--------------FLRKS-RVLET--DPAF------AIANSTASTLSSQQLLHFAADVARGMDYLS- 141 (303)
T ss_pred EEECCCCCCHHH--------------HHHHC-CCCCC--CCCH------HHCCCCCCCCCHHHHHHHHHHHHHHHHHHH-
T ss_conf 997479985999--------------99754-66555--6201------002354567899999999999999999871-
Q ss_pred HHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 6521077744402234642256279604873162135
Q gi|254780795|r 177 SWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 177 ~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 142 ------~~~IiHRDLKp~NILl~~~~~~KI~DFGls~ 172 (303)
T cd05088 142 ------QKQFIHRDLAARNILVGENYVAKIADFGLSR 172 (303)
T ss_pred ------CCCEEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf ------1986745577411788899978998267786