HHsearch alignment for GI: 254780795 and conserved domain: cd05112
>cd05112 PTKc_Itk Catalytic Domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.67 E-value=0.0027 Score=40.92 Aligned_cols=141 Identities=18% Similarity=0.230 Sum_probs=80.3
Q ss_pred EEEEEECCCCCEEEEEEEEECCC-CEEEEEECC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 05310046681200179994399-589998216-6998899999999999853267755510010267787522451557
Q gi|254780795|r 24 LNSVQPIIHGVENSNFVIQTSKG-TFILTIYEK-RMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 24 ~~~~~~i~~G~~Ntny~v~t~~~-~yiLri~e~-~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 6 ~~~~~~iG~G~fg~Vy~~~~~~~~~VAvK~~~~~~~~~~~f~~E~~~l~~l~H-----pnIv~~~-g~--~~~~~~~~iv 77 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH-----PKLVQLY-GV--CTERSPICLV 77 (256)
T ss_pred EEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC-----CCCCCCC-EE--EEECCEEEEE
T ss_conf 09878980585859999998799999999988687888999999999997699-----9890403-17--7219989999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN 181 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 181 (316)
T Consensus 78 ~Ey~~~G~L~~-----~---------l~~~--------~~~~~~~---~~~---------~i~~~ia~gl~yLH~----- 118 (256)
T cd05112 78 FEFMEHGCLSD-----Y---------LRAQ--------RGKFSQE---TLL---------GMCLDVCEGMAYLES----- 118 (256)
T ss_pred EECCCCCCHHH-----H---------HHHC--------CCCCCHH---HHH---------HHHHHHHHHHHHHHH-----
T ss_conf 96689998899-----9---------9754--------7999999---999---------999999999999836-----
Q ss_pred CCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 77744402234642256279604873162135
Q gi|254780795|r 182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 119 --~~iiHrDlk~~NiLl~~~~~~Kl~DFGls~ 148 (256)
T cd05112 119 --SNVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred --CCEECCCCCCCEEEECCCCCEEEEECCCCE
T ss_conf --891567577163899899989996268750