HHsearch alignment for GI: 254780795 and conserved domain: cd05115
>cd05115 PTKc_Zap-70 Catalytic Domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=94.57 E-value=0.11 Score=30.62 Aligned_cols=116 Identities=20% Similarity=0.349 Sum_probs=60.7
Q ss_pred EEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf 899982166998---89999999999985326775551001026778752245155786478870768998999999998
Q gi|254780795|r 48 FILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSM 124 (316)
Q Consensus 48 yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~ 124 (316)
T Consensus 25 VavK~l~~~~~~~~~~~f~~E~~~l~~l~H-----pnIV~l~-g~--~-~~~~~~ivmE~~~~G~L~~~----------- 84 (257)
T cd05115 25 VAIKVLKNENEKSVRDEMMREAEIMHQLDN-----PYIVRMI-GV--C-EAEALMLVMEMASGGPLNKF----------- 84 (257)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCEEEEE-EE--E-ECCCEEEEEEECCCCCHHHH-----------
T ss_conf 999998813797899999999999985899-----6880699-99--9-31977999991799878999-----------
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf 64367530687543323112456457667520015522788999999988876521077744402234642256279604
Q gi|254780795|r 125 LASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIM 204 (316)
Q Consensus 125 La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~ 204 (316)
T Consensus 85 l---~~--~------~~~l~---~~~~~---------~i~~qia~gl~yLH~-------~~iiHrDLK~~NiLl~~~~~~ 134 (257)
T cd05115 85 L---SG--K------KDEIT---VSNVV---------ELMHQVSMGMKYLEG-------KNFVHRDLAARNVLLVNQHYA 134 (257)
T ss_pred H---HC--C------CCCCC---HHHHH---------HHHHHHHHHHHHHHH-------CCCCCCCCCCCEEEECCCCCE
T ss_conf 8---32--6------78999---99999---------999999999999986-------896567676210788589978
Q ss_pred EEECCCCCC
Q ss_conf 873162135
Q gi|254780795|r 205 GLIDFYFSC 213 (316)
Q Consensus 205 giIDF~~~~ 213 (316)
T Consensus 135 Ki~DFGls~ 143 (257)
T cd05115 135 KISDFGLSK 143 (257)
T ss_pred EEEECCCCE
T ss_conf 999768854