HHsearch alignment for GI: 254780795 and conserved domain: cd05115

>cd05115 PTKc_Zap-70 Catalytic Domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=94.57  E-value=0.11  Score=30.62  Aligned_cols=116  Identities=20%  Similarity=0.349  Sum_probs=60.7

Q ss_pred             EEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf             899982166998---89999999999985326775551001026778752245155786478870768998999999998
Q gi|254780795|r   48 FILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSM  124 (316)
Q Consensus        48 yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~  124 (316)
T Consensus        25 VavK~l~~~~~~~~~~~f~~E~~~l~~l~H-----pnIV~l~-g~--~-~~~~~~ivmE~~~~G~L~~~-----------   84 (257)
T cd05115          25 VAIKVLKNENEKSVRDEMMREAEIMHQLDN-----PYIVRMI-GV--C-EAEALMLVMEMASGGPLNKF-----------   84 (257)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCEEEEE-EE--E-ECCCEEEEEEECCCCCHHHH-----------
T ss_conf             999998813797899999999999985899-----6880699-99--9-31977999991799878999-----------


Q ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf             64367530687543323112456457667520015522788999999988876521077744402234642256279604
Q gi|254780795|r  125 LASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIM  204 (316)
Q Consensus       125 La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~  204 (316)
T Consensus        85 l---~~--~------~~~l~---~~~~~---------~i~~qia~gl~yLH~-------~~iiHrDLK~~NiLl~~~~~~  134 (257)
T cd05115          85 L---SG--K------KDEIT---VSNVV---------ELMHQVSMGMKYLEG-------KNFVHRDLAARNVLLVNQHYA  134 (257)
T ss_pred             H---HC--C------CCCCC---HHHHH---------HHHHHHHHHHHHHHH-------CCCCCCCCCCCEEEECCCCCE
T ss_conf             8---32--6------78999---99999---------999999999999986-------896567676210788589978


Q ss_pred             EEECCCCCC
Q ss_conf             873162135
Q gi|254780795|r  205 GLIDFYFSC  213 (316)
Q Consensus       205 giIDF~~~~  213 (316)
T Consensus       135 Ki~DFGls~  143 (257)
T cd05115         135 KISDFGLSK  143 (257)
T ss_pred             EEEECCCCE
T ss_conf             999768854