HHsearch alignment for GI: 254780795 and conserved domain: cd05118
>cd05118 STKc_CMGC The catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals.
Probab=97.66 E-value=0.00034 Score=46.77 Aligned_cols=137 Identities=19% Similarity=0.248 Sum_probs=74.1
Q ss_pred EEECCCCCEEEEEEEEEC-CC-CEEEEEECCCC-CH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 100466812001799943-99-58999821669-98---89999999999985326775551001026778752245155
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKRM-NE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~-~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 4 i~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~---~~~~~~~~~l 75 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH-----PNIIKLLD---VFRHKGDLYL 75 (283)
T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEE
T ss_conf 689422669499999988999899999983345395889999999999986799-----89893999---9998999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 76 vmEy~~~~l~-----~----------~l~~~~~~l~--------e~~~------------~~~~~qil~al~yLH~---- 116 (283)
T cd05118 76 VFEFMDTDLY-----K----------LIKDRQRGLP--------ESLI------------KSYLYQLLQGLAFCHS---- 116 (283)
T ss_pred EEECCCCCHH-----H----------HHHHCCCCCC--------HHHH------------HHHHHHHHHHHHHHHH----
T ss_conf 9817788657-----9----------9997289989--------9999------------9999999999999997----
Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 077744402234642256279604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 117 ---~~IiHRDlKPeNILl~~~~~iKl~DFG~a~ 146 (283)
T cd05118 117 ---HGILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred ---CCEEECCCCHHHEEECCCCCEEEEEECCCE
T ss_conf ---996604376566689899988998404562