HHsearch alignment for GI: 254780795 and conserved domain: cd05118

>cd05118 STKc_CMGC The catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals.
Probab=97.66  E-value=0.00034  Score=46.77  Aligned_cols=137  Identities=19%  Similarity=0.248  Sum_probs=74.1

Q ss_pred             EEECCCCCEEEEEEEEEC-CC-CEEEEEECCCC-CH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf             100466812001799943-99-58999821669-98---89999999999985326775551001026778752245155
Q gi|254780795|r   27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKRM-NE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN  100 (316)
Q Consensus        27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~-~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~  100 (316)
T Consensus         4 i~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~---~~~~~~~~~l   75 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH-----PNIIKLLD---VFRHKGDLYL   75 (283)
T ss_pred             EEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEE
T ss_conf             689422669499999988999899999983345395889999999999986799-----89893999---9998999999


Q ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r  101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK  180 (316)
Q Consensus       101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  180 (316)
T Consensus        76 vmEy~~~~l~-----~----------~l~~~~~~l~--------e~~~------------~~~~~qil~al~yLH~----  116 (283)
T cd05118          76 VFEFMDTDLY-----K----------LIKDRQRGLP--------ESLI------------KSYLYQLLQGLAFCHS----  116 (283)
T ss_pred             EEECCCCCHH-----H----------HHHHCCCCCC--------HHHH------------HHHHHHHHHHHHHHHH----
T ss_conf             9817788657-----9----------9997289989--------9999------------9999999999999997----


Q ss_pred             CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             077744402234642256279604873162135
Q gi|254780795|r  181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       117 ---~~IiHRDlKPeNILl~~~~~iKl~DFG~a~  146 (283)
T cd05118         117 ---HGILHRDLKPENLLINTEGVLKLADFGLAR  146 (283)
T ss_pred             ---CCEEECCCCHHHEEECCCCCEEEEEECCCE
T ss_conf             ---996604376566689899988998404562