>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

Probab=98.96 E-value=9.2e-09 Score=76.34 Aligned_cols=133 Identities=23% Similarity=0.347 Sum_probs=80.9 Q ss_pred ECCCCCEEEEEEEEECCCC-EEEEEECCC---------------------CCHH-----HHHHHHHHHHHHHHCCCCCCC Q ss_conf 0466812001799943995-899982166---------------------9988-----999999999998532677555 Q gi|254780795|r 29 PIIHGVENSNFVIQTSKGT-FILTIYEKR---------------------MNEK-----DLPVFIELLHYISRNKLPCPI 81 (316) Q Consensus 29 ~i~~G~~Ntny~v~t~~~~-yiLri~e~~---------------------~~~~-----~l~~~~~ll~~L~~~gipvP~ 81 (316) T Consensus 4 ~I~~GKEa~Vy~a~~~~g~~~avKi~r~~~~~Fk~~~~y~~~d~~~~~~~~~~~~~~~~wA~kEf~~L~rl~~~Gv~VP~ 83 (187) T cd05119 4 PIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPK 83 (187) T ss_pred CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 75125571189999899999999997667343152777313204315788899999999999999999999985999980 Q ss_pred CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH Q ss_conf 10010267787522451557864788707689989999999986436753068754332311245645766752001552 Q gi|254780795|r 82 PIPRNDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDE 161 (316) Q Consensus 82 pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~ 161 (316) T Consensus 84 Pi~~~----------~~vlvMe~Ig~~~~~ap~----------L~~~~-------~----------------------~~ 114 (187) T cd05119 84 PIDLN----------RHVLVMEFIGGDGIPAPR----------LKDVR-------L----------------------LE 114 (187) T ss_pred EEEEE----------CCEEEEEEECCCCCCCCC----------HHHCC-------C----------------------CH T ss_conf 79970----------987999981688977846----------53387-------5----------------------25 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC Q ss_conf 27889999999888765210777444022346422562796048731621356 Q gi|254780795|r 162 DLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316) Q Consensus 162 ~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316) T Consensus 115 ~~~~~~~~il~~~~~~-~~--~~glVHgDLSeyNilv~~~~~~-iID~pQaV~ 163 (187) T cd05119 115 DPEELYDQILELMRKL-YR--EAGLVHGDLSEYNILVDDGKVY-IIDVPQAVE 163 (187) T ss_pred HHHHHHHHHHHHHHHH-HH--HCCCCCCCCCHHHEEEECCEEE-EEECCCEEC T ss_conf 3999999999999999-99--7493103655554589899089-995572104

HHsearch alignment for GI: 254780795 and conserved domain: cd05119