>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

Probab=98.81 E-value=6.9e-08 Score=70.65 Aligned_cols=133 Identities=22% Similarity=0.337 Sum_probs=77.8 Q ss_pred CCCCCEEEEEEEEECCCC-EEEEEECC--------------------C---CCHHH-----HHHHHHHHHHHHHCCCCCC Q ss_conf 466812001799943995-89998216--------------------6---99889-----9999999999853267755 Q gi|254780795|r 30 IIHGVENSNFVIQTSKGT-FILTIYEK--------------------R---MNEKD-----LPVFIELLHYISRNKLPCP 80 (316) Q Consensus 30 i~~G~~Ntny~v~t~~~~-yiLri~e~--------------------~---~~~~~-----l~~~~~ll~~L~~~gipvP 80 (316) T Consensus 5 I~~GKEs~Vy~a~~~~g~~~alKi~r~~~~sFk~~~~Y~~gd~r~~~~~~~~~~r~~~~~wA~kEf~~L~~l~~~Gv~VP 84 (190) T cd05145 5 ISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVP 84 (190) T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 10351502899998999889999977264333144451057722405647669889999999999999999998599999 Q ss_pred CCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC Q ss_conf 51001026778752245155786478870768998999999998643675306875433231124564576675200155 Q gi|254780795|r 81 IPIPRNDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVD 160 (316) Q Consensus 81 ~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~ 160 (316) T Consensus 85 ~Pi~~~----------rhvlvMefIg~~g~pap~----------L~d~-------~~~------~--------------- 116 (190) T cd05145 85 EPILLK----------KNVLVMEFIGDDGSPAPR----------LKDV-------PLE------E--------------- 116 (190) T ss_pred CEEEEC----------CCEEEEEEECCCCCCCCC----------HHHC-------CCC------H--------------- T ss_conf 568862----------989999986589842430----------3205-------677------3--------------- Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC Q ss_conf 227889999999888765210777444022346422562796048731621356 Q gi|254780795|r 161 EDLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316) Q Consensus 161 ~~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316) T Consensus 117 ~~~~~~~~~il~~~~~l~-~--~~glVHgDLSEyNILv~~~~~~-iID~pQaV~ 166 (190) T cd05145 117 EEAEELYEQVVEQMRRLY-Q--EAGLVHGDLSEYNILYHDGKPY-IIDVSQAVE 166 (190) T ss_pred HHHHHHHHHHHHHHHHHH-H--HCCEEECCCCHHHEEEECCCEE-EEECCCCCC T ss_conf 509999999999999999-9--7492103641553389789479-995576125

HHsearch alignment for GI: 254780795 and conserved domain: cd05145