HHsearch alignment for GI: 254780795 and conserved domain: cd05582
>cd05582 STKc_RSK_N STKc_RSK_N: Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein ki
Probab=97.44 E-value=0.0018 Score=42.14 Aligned_cols=136 Identities=20% Similarity=0.278 Sum_probs=70.4
Q ss_pred EECCCCCEEEEEEEEE----CCCC-EEEEEECCC-CCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 0046681200179994----3995-899982166-9988---99999999999853267755510010267787522451
Q gi|254780795|r 28 QPIIHGVENSNFVIQT----SKGT-FILTIYEKR-MNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP 98 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t----~~~~-yiLri~e~~-~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~ 98 (316)
T Consensus 2 k~iG~G~fG~Vylv~~~~~~~tg~~~AiK~i~k~~~~~~~~~~~~~E~~il~~l-----~Hp~Iv~l~~---~f~~~~~l 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-----NHPFIVKLHY---AFQTEGKL 73 (318)
T ss_pred CEECCCCCCEEEEEEEEECCCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHC-----CCCCCCEEEE---EEEECCEE
T ss_conf 675018980899999700078891899999835766867899999999999877-----9998891999---99989989
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55786478870768998999999998643675306875433231124564576675200155227889999999888765
Q gi|254780795|r 99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW 178 (316)
Q Consensus 99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 178 (316)
T Consensus 74 ylvmEy~~gGdL~--------------~~l~~~-~~l--------~e~~~~------------~~~~qi~~aL~ylH~-- 116 (318)
T cd05582 74 YLILDFLRGGDLF--------------TRLSKE-VMF--------TEEDVK------------FYLAELALALDHLHS-- 116 (318)
T ss_pred EEEEECCCCCCHH--------------HHHHCC-CCC--------CHHHHH------------HHHHHHHHHHHHHHH--
T ss_conf 9999558998487--------------763016-899--------999999------------999999999999987--
Q ss_pred HHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 21077744402234642256279604873162135
Q gi|254780795|r 179 PKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 179 ~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 117 -----~~IiHRDlKPeNILld~~g~iKL~DFGlak 146 (318)
T cd05582 117 -----LGIIYRDLKPENILLDEEGHIKLTDFGLSK 146 (318)
T ss_pred -----CCCEEEEECCCCCCCCCCCCEEECCCCHHH
T ss_conf -----898721014544541788988642312202