HHsearch alignment for GI: 254780795 and conserved domain: cd05597
>cd05597 STKc_DMPK_like STKc_DMPK_like: Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational
Probab=95.86 E-value=0.023 Score=34.97 Aligned_cols=135 Identities=17% Similarity=0.152 Sum_probs=68.3
Q ss_pred EECCCCCEEEEEEEEECC-C-CEEEEEECCC--CCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 004668120017999439-9-5899982166--99889---999999999985326775551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQTSK-G-TFILTIYEKR--MNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t~~-~-~yiLri~e~~--~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 7 ~~IG~G~fG~V~~a~~k~tg~~~AiKii~k~~~~~~~~~~~~~~E~~il~~~~-----hp~Iv~l~~---~f~~~~~~yl 78 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-----RRWITNLHY---AFQDENNLYL 78 (331)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHCC-----CCCEEEEEE---EEEECCEEEE
T ss_conf 89732738299999998999899999983789227889999999999998579-----998747999---9997999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 79 vmEy~~gGdL~-----------~~l~~~~---~~l~--------e~~a~------------~~~~qi~~aL~ylH~---- 120 (331)
T cd05597 79 VMDYYVGGDLL-----------TLLSKFE---DRLP--------EDMAR------------FYLAEMVLAIDSVHQ---- 120 (331)
T ss_pred EEEECCCCCHH-----------HHHHHHC---CCCC--------HHHHH------------HHHHHHHHHHHHHHH----
T ss_conf 99813797468-----------8998606---7899--------99999------------999999999999997----
Q ss_pred CCCCCEEECCCCCCCEEECC-CCCEEEECCCCC
Q ss_conf 07774440223464225627-960487316213
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFS 212 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~ 212 (316)
T Consensus 121 ---~~IiHRDlKPeNILl~~~g~iK-L~DFG~a 149 (331)
T cd05597 121 ---LGYVHRDIKPDNVLLDKNGHIR-LADFGSC 149 (331)
T ss_pred ---CCEECCCCCCCCCCCCCCCCEE-EEECCHH
T ss_conf ---7906154677663346899889-9841122