HHsearch alignment for GI: 254780795 and conserved domain: cd05599
>cd05599 STKc_NDR_like STKc_NDR_like: Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This su
Probab=97.57 E-value=0.0048 Score=39.30 Aligned_cols=137 Identities=17% Similarity=0.179 Sum_probs=71.2
Q ss_pred EEECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 100466812001799943-99-5899982166--99889---99999999998532677555100102677875224515
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 6 ik~lG~G~fg~V~~~~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~---~f~~~~~~y 77 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-----DNPWVVKLYY---SFQDENYLY 77 (364)
T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC-----CCCCCCEEEE---EEEECCEEE
T ss_conf 37952287849999998899989999998468814778999999999999877-----9998893999---999899999
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 78 lvmEy~~gGdL~--------------~~l~~~-~~l--------~e~~~~------------~~~~qi~~aL~ylH---- 118 (364)
T cd05599 78 LIMEYLPGGDMM--------------TLLMKK-DTF--------TEEETR------------FYIAETILAIDSIH---- 118 (364)
T ss_pred EEEECCCCCCHH--------------HHHHHC-CCC--------CHHHHH------------HHHHHHHHHHHHHH----
T ss_conf 998378897289--------------999865-999--------999999------------99999999999997----
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 119 ---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~ 149 (364)
T cd05599 119 ---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred ---HCCEEECCCCCCEEEECCCCCEEEEECCCCC
T ss_conf ---5765400044233799799988997267772