HHsearch alignment for GI: 254780795 and conserved domain: cd05599

>cd05599 STKc_NDR_like STKc_NDR_like: Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This su
Probab=97.57  E-value=0.0048  Score=39.30  Aligned_cols=137  Identities=17%  Similarity=0.179  Sum_probs=71.2

Q ss_pred             EEECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf             100466812001799943-99-5899982166--99889---99999999998532677555100102677875224515
Q gi|254780795|r   27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA   99 (316)
Q Consensus        27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~   99 (316)
T Consensus         6 ik~lG~G~fg~V~~~~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~---~f~~~~~~y   77 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-----DNPWVVKLYY---SFQDENYLY   77 (364)
T ss_pred             EEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC-----CCCCCCEEEE---EEEECCEEE
T ss_conf             37952287849999998899989999998468814778999999999999877-----9998893999---999899999


Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r  100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP  179 (316)
Q Consensus       100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  179 (316)
T Consensus        78 lvmEy~~gGdL~--------------~~l~~~-~~l--------~e~~~~------------~~~~qi~~aL~ylH----  118 (364)
T cd05599          78 LIMEYLPGGDMM--------------TLLMKK-DTF--------TEEETR------------FYIAETILAIDSIH----  118 (364)
T ss_pred             EEEECCCCCCHH--------------HHHHHC-CCC--------CHHHHH------------HHHHHHHHHHHHHH----
T ss_conf             998378897289--------------999865-999--------999999------------99999999999997----


Q ss_pred             HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             1077744402234642256279604873162135
Q gi|254780795|r  180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       119 ---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~  149 (364)
T cd05599         119 ---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT  149 (364)
T ss_pred             ---HCCEEECCCCCCEEEECCCCCEEEEECCCCC
T ss_conf             ---5765400044233799799988997267772