HHsearch alignment for GI: 254780795 and conserved domain: cd05618
>cd05618 STKc_aPKC_iota STKc_aPKC_iota: Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been i
Probab=97.54 E-value=0.0021 Score=41.61 Aligned_cols=135 Identities=16% Similarity=0.251 Sum_probs=69.5
Q ss_pred CCCCEEEEEEEEEC-CC-CEEEEEECCC-C-CHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
Q ss_conf 66812001799943-99-5899982166-9-9889---999999999985326775551001026778752245155786
Q gi|254780795|r 31 IHGVENSNFVIQTS-KG-TFILTIYEKR-M-NEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFS 103 (316)
Q Consensus 31 ~~G~~Ntny~v~t~-~~-~yiLri~e~~-~-~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~ 103 (316)
T Consensus 4 G~G~fG~V~~~~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~~~H----p~Iv~l~~---~f~~~~~lylVmE 76 (329)
T cd05618 4 GRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH----PFLVGLHS---CFQTESRLFFVIE 76 (329)
T ss_pred EECCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCC----CCCCEEEE---EEEECCEEEEEEE
T ss_conf 0387939999999899989999998678877989999999999999971399----97795999---9998999999995
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 47887076899899999999864367530687543323112456457667520015522788999999988876521077
Q gi|254780795|r 104 FIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLP 183 (316)
Q Consensus 104 ~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp 183 (316)
T Consensus 77 y~~GGdL~--------------~~l~~~-~~l~--------e~~a~------------~~~~qi~~aL~yLH-------~ 114 (329)
T cd05618 77 YVNGGDLM--------------FHMQRQ-RKLP--------EEHAR------------FYSAEISLALNYLH-------E 114 (329)
T ss_pred CCCCCCHH--------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHH-------C
T ss_conf 88988989--------------999874-9999--------99999------------99999999999986-------3
Q ss_pred CCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 7444022346422562796048731621356
Q gi|254780795|r 184 TGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 184 ~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 115 ~~IiHRDLKPeNILld~~g~iKL~DFGlak~ 145 (329)
T cd05618 115 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred CCEEECCCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf 9689644572100315688566314005555