HHsearch alignment for GI: 254780795 and conserved domain: cd05619
>cd05619 STKc_nPKC_theta STKc_nPKC_theta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other
Probab=97.03 E-value=0.01 Score=37.23 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=67.1
Q ss_pred CCCCCEEEEEEEEEC-CC-CEEEEEECCCC--CHHHHH---HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 466812001799943-99-58999821669--988999---999999998532677555100102677875224515578
Q gi|254780795|r 30 IIHGVENSNFVIQTS-KG-TFILTIYEKRM--NEKDLP---VFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIF 102 (316)
Q Consensus 30 i~~G~~Ntny~v~t~-~~-~yiLri~e~~~--~~~~l~---~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~ 102 (316)
T Consensus 3 IG~G~fG~V~la~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~----~~~Hp~Iv~l~~---~f~~~~~lylvm 75 (316)
T cd05619 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL----AWEHPFLTHLYC---TFQTKENLFFVM 75 (316)
T ss_pred EEECCCEEEEEEEECCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHH----HCCCCCCCEEEE---EEEECCEEEEEE
T ss_conf 4328895999999999998999999817873371589999999999997----379998885999---999899999999
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 64788707689989999999986436753068754332311245645766752001552278899999998887652107
Q gi|254780795|r 103 SFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNL 182 (316)
Q Consensus 103 ~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~L 182 (316)
T Consensus 76 Ey~~gGdL~~-----------~l~~~~----~~~--------~~~a~------------~~~~qi~~aL~ylH~------ 114 (316)
T cd05619 76 EYLNGGDLMF-----------HIQSCH----KFD--------LPRAT------------FYAAEIICGLQFLHS------ 114 (316)
T ss_pred ECCCCCCHHH-----------HHHHCC----CCC--------HHHHH------------HHHHHHHHHHHHHHH------
T ss_conf 7569987888-----------786438----999--------99999------------999999999999987------
Q ss_pred CCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 7744402234642256279604873162135
Q gi|254780795|r 183 PTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 183 p~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 115 -~~IiHRDlKpeNILl~~~g~iKL~DFGlak 144 (316)
T cd05619 115 -KGIVYRDLKLDNILLDTDGHIKIADFGMCK 144 (316)
T ss_pred -CCEEECCCCCCCCCCCCCCCEEEECCCHHH
T ss_conf -894744347656552579977873112566