HHsearch alignment for GI: 254780795 and conserved domain: cd06614
>cd06614 STKc_PAK Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I
Probab=98.15 E-value=6.6e-05 Score=51.37 Aligned_cols=154 Identities=16% Similarity=0.256 Sum_probs=82.3
Q ss_pred HHHHHHHHCCCC-CEEEEEECCCCCEEEEEEEEE-CCC-CEEEEEECCC--CCHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 999999848998-605310046681200179994-399-5899982166--99889999999999985326775551001
Q gi|254780795|r 11 EIQSFVQEYAIG-QLNSVQPIIHGVENSNFVIQT-SKG-TFILTIYEKR--MNEKDLPVFIELLHYISRNKLPCPIPIPR 85 (316)
Q Consensus 11 el~~il~~y~lg-~~~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~--~~~~~l~~~~~ll~~L~~~gipvP~pi~~ 85 (316)
T Consensus 7 ~~~~~~~~~d~~~~Y~i~~~iG~G~fg~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H-----pnIV~l 81 (287)
T cd06614 7 ALKDIVSEGDPRELYDNLEKIGEGASGEVYTATDRATGKEVAIKKMRLRKQPKKELIINEILIMKECKH-----PNIVNY 81 (287)
T ss_pred HHHHHCCCCCHHHCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCC-----CCCCCE
T ss_conf 999874799941565974798038685999999999998999999870674579999999999987799-----999919
Q ss_pred CHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 02677875224515578647887076899899999999864367530687543323112456457667520015522788
Q gi|254780795|r 86 NDGKLYGFLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKK 165 (316)
Q Consensus 86 ~~G~~~~~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (316)
T Consensus 82 ~~---~~~~~~~~~ivmEy~~gG~L~~-----------~i---~~~~~~l--------~e~~~------------~~i~~ 124 (287)
T cd06614 82 YD---SYLVGDELWVVMEYMDGGSLTD-----------II---TQTFVRM--------NESQI------------AYVCR 124 (287)
T ss_pred EE---EEEECCEEEEEEECCCCCCHHH-----------HH---HHCCCCC--------CHHHH------------HHHHH
T ss_conf 99---9998999999996888992899-----------99---8668998--------99999------------99999
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 999999988876521077744402234642256279604873162135
Q gi|254780795|r 166 EIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 166 ~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 125 qil~aL~ylH~-------~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 165 (287)
T cd06614 125 EVLQGLEYLHS-------QNVIHRDIKSDNILLSKDGSVKLADFGFAA 165 (287)
T ss_pred HHHHHHHHHHH-------CCEECCCCCHHHEEECCCCCEEEECCCCCE
T ss_conf 99999999998-------894402176798789899999996177755