HHsearch alignment for GI: 254780795 and conserved domain: cd06619

>cd06619 PKc_MKK5 Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (
Probab=97.52  E-value=0.0019  Score=41.88  Aligned_cols=130  Identities=17%  Similarity=0.215  Sum_probs=72.5

Q ss_pred             ECCCCCEEEEEEEEE-CCCC-EEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             046681200179994-3995-899982166998---89999999999985326775551001026778752245155786
Q gi|254780795|r   29 PIIHGVENSNFVIQT-SKGT-FILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFS  103 (316)
Q Consensus        29 ~i~~G~~Ntny~v~t-~~~~-yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~  103 (316)
T Consensus         8 ~iG~G~fg~Vy~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~h-----pnIv~~~~---~~~~~~~~~iv~E   79 (279)
T cd06619           8 ILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS-----PYIIGFYG---AFFVENRISICTE   79 (279)
T ss_pred             EEECCCCEEEEEEEECCCCCEEEEEEECHHCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEEEEE
T ss_conf             985178929999999999979999998843198999999999999986799-----99991979---9998999899997


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             47887076899899999999864367530687543323112456457667520015522788999999988876521077
Q gi|254780795|r  104 FIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLP  183 (316)
Q Consensus       104 ~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp  183 (316)
T Consensus        80 ~~~gg~L~--------~~----~~-------~~e------------~~~~--------~i~~qi~~aL~ylH~-------  113 (279)
T cd06619          80 FMDGGSLD--------VY----RK-------IPE------------HVLG--------RIAVAVVKGLTYLWS-------  113 (279)
T ss_pred             CCCCCCHH--------HH----HC-------CCH------------HHHH--------HHHHHHHHHHHHHHH-------
T ss_conf             16998599--------98----56-------899------------9999--------999999999999997-------


Q ss_pred             CCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf             74440223464225627-9604873162135
Q gi|254780795|r  184 TGIIHADLFPDNVLFYN-NKIMGLIDFYFSC  213 (316)
Q Consensus       184 ~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~  213 (316)
T Consensus       114 ~~iiHRDiKp~NILl~~~g~v-Kl~DFGla~  143 (279)
T cd06619         114 LKILHRDVKPSNMLVNTRGQV-KLCDFGVST  143 (279)
T ss_pred             CCEEECCCCCCCCCCCCCCCE-EECCCCCCE
T ss_conf             890535367766438899999-985583642