HHsearch alignment for GI: 254780795 and conserved domain: cd06621
>cd06621 PKc_MAPKK_Pek1_like Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharo
Probab=97.77 E-value=0.0012 Score=43.30 Aligned_cols=146 Identities=15% Similarity=0.221 Sum_probs=77.4
Q ss_pred EEEEEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 053100466812001799943-995-8999821669988---99999999999853267755510010267787522451
Q gi|254780795|r 24 LNSVQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP 98 (316)
Q Consensus 24 ~~~~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~ 98 (316)
T Consensus 3 y~~l~~lG~G~fg~V~~a~~~~~~~~~AiK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~-~~~~~~~~~~ 76 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS-----PYIVKYYG-AFLDESSSSI 76 (287)
T ss_pred CEEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCCCCEEE-EEECCCCCEE
T ss_conf 68985730488909999998999919999998303595899999999999985799-----99990978-9970889989
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55786478870768998999999998643675306875433231124564576675200155227889999999888765
Q gi|254780795|r 99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW 178 (316)
Q Consensus 99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 178 (316)
T Consensus 77 ~ivmEy~~gg~L~~-----------~~~~~~~~~~~~~--------e~----~~--------~~i~~qil~gL~ylH~-- 123 (287)
T cd06621 77 GIAMEYCEGGSLDS-----------IYKKVKKRGGRIG--------EK----VL--------GKIAESVLKGLSYLHS-- 123 (287)
T ss_pred EEEEECCCCCCHHH-----------HHHHHHHCCCCCC--------HH----HH--------HHHHHHHHHHHHHHHH--
T ss_conf 99995469993999-----------9999987179999--------99----99--------9999999999999997--
Q ss_pred HHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 21077744402234642256279604873162135
Q gi|254780795|r 179 PKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 179 ~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 124 -----~~iiHRDlKp~NILl~~~g~vKl~DFG~s~ 153 (287)
T cd06621 124 -----RKIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred -----CCCEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf -----990422167455006799989999785575