HHsearch alignment for GI: 254780795 and conserved domain: cd06622
>cd06622 PKc_MAPKK_PBS2_like Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cer
Probab=97.53 E-value=0.0028 Score=40.88 Aligned_cols=141 Identities=20% Similarity=0.258 Sum_probs=74.7
Q ss_pred EEEECCCCCEEEEEEEEEC-CC-CEEEEEECCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 3100466812001799943-99-589998216699889---999999999985326775551001026778752245155
Q gi|254780795|r 26 SVQPIIHGVENSNFVIQTS-KG-TFILTIYEKRMNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 26 ~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 5 il~~IG~G~fg~Vy~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~-----hpnIv~l~~---~~~~~~~~~i 76 (286)
T cd06622 5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV-----SPYIVDFYG---AFFIEGAVYM 76 (286)
T ss_pred EEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCC-----CCCEECCCE---EEEECCEEEE
T ss_conf 98896138790999999989996999999864409899999999999998679-----998943541---8998998999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 77 vmE~~~~G~L~-----------~l~~~~~-~~~~~~--------e~~----~~--------~i~~ql~~gL~ylH~---- 120 (286)
T cd06622 77 CMEYMDAGSLD-----------KLYAGGV-ATEGIP--------EDV----LR--------RITYAVVKGLKFLKE---- 120 (286)
T ss_pred EEECCCCCCHH-----------HHHHHCC-CCCCCC--------HHH----HH--------HHHHHHHHHHHHHHH----
T ss_conf 99807999199-----------9986033-357899--------999----99--------999999999999987----
Q ss_pred CCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf 07774440223464225627-9604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~ 213 (316)
T Consensus 121 --~~~IiHRDIKP~NILi~~~g~vK-l~DFG~a~ 151 (286)
T cd06622 121 --EHNIIHRDVKPTNVLVNGNGQVK-LCDFGVSG 151 (286)
T ss_pred --HCCEEECCCCHHHEEECCCCCEE-EEECCCCC
T ss_conf --28974155777766688999899-97378886