HHsearch alignment for GI: 254780795 and conserved domain: cd06637
>cd06637 STKc_TNIK Serine/threonine kinases (STKs),Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytos
Probab=97.71 E-value=0.0012 Score=43.21 Aligned_cols=148 Identities=19% Similarity=0.240 Sum_probs=79.5
Q ss_pred CCEEEEEECCCCCEEEEEEEEE-CCCC-EEEEEECC-CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH----HH
Q ss_conf 8605310046681200179994-3995-89998216-6998899999999999853267755510010267787----52
Q gi|254780795|r 22 GQLNSVQPIIHGVENSNFVIQT-SKGT-FILTIYEK-RMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYG----FL 94 (316)
Q Consensus 22 g~~~~~~~i~~G~~Ntny~v~t-~~~~-yiLri~e~-~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~----~~ 94 (316)
T Consensus 6 g~y~~~~~IG~G~fg~Vy~a~~~~~~~~~AiK~i~~~~~~~~~~~~E~~~l~~~~~h~n-i~~~----~~~~~~~~~~~~ 80 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN-IATY----YGAFIKKNPPGM 80 (272)
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCC-EEEE----EEEEEECCCCCC
T ss_conf 88698779922878299999998999799999986687869999999999985659980-7489----999996578887
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 24515578647887076899899999999864367530687543323112456457667520015522788999999988
Q gi|254780795|r 95 CKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFL 174 (316)
Q Consensus 95 ~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 174 (316)
T Consensus 81 ~~~~~ivmE~~~~G~L~-----------~~l---~~-~~~~------~~~e~~i~------------~i~~qi~~gl~yl 127 (272)
T cd06637 81 DDQLWLVMEFCGAGSVT-----------DLI---KN-TKGN------TLKEEWIA------------YICREILRGLSHL 127 (272)
T ss_pred CCEEEEEEECCCCCCHH-----------HHH---HH-CCCC------CCCHHHHH------------HHHHHHHHHHHHH
T ss_conf 88899999588999799-----------999---87-1689------99999999------------9999999999999
Q ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 8765210777444022346422562796048731621356
Q gi|254780795|r 175 KESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 175 ~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 128 H~-------~~iiHRDlKp~NILl~~~~~vKi~DFGls~~ 160 (272)
T cd06637 128 HQ-------HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred HH-------CCCCCCCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf 98-------9915674678998987999899985888658