HHsearch alignment for GI: 254780795 and conserved domain: cd06650
>cd06650 PKc_MEK1 MEK1 (MAPKK1 or MKK1): Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase
Probab=97.54 E-value=0.005 Score=39.22 Aligned_cols=140 Identities=15% Similarity=0.229 Sum_probs=72.6
Q ss_pred EEEEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 53100466812001799943-995-8999821669988---999999999998532677555100102677875224515
Q gi|254780795|r 25 NSVQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 25 ~~~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 8 eii~~IG~G~fG~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~-----hpnIV~~~~---~~~~~~~~~ 79 (333)
T cd06650 8 EKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN-----SPYIVGFYG---AFYSDGEIS 79 (333)
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHCC-----CCCCCCEEE---EEEECCEEE
T ss_conf 880276038991999999889995999999765428789999999999998679-----999991989---999899999
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 80 ivmEy~~gg~L~~-----------~l~~~----~~~~--------e~----~~~--------~i~~qi~~gL~ylH~--- 121 (333)
T cd06650 80 ICMEHMDGGSLDQ-----------VLKKA----GRIP--------EQ----ILG--------KVSIAVIKGLTYLRE--- 121 (333)
T ss_pred EEEECCCCCCHHH-----------HHHHC----CCCC--------HH----HHH--------HHHHHHHHHHHHHHH---
T ss_conf 9998389997899-----------99754----9999--------99----999--------999999999999986---
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 122 ---~~~IiHRDIKP~NILi~~~g~vKL~DFGla~ 152 (333)
T cd06650 122 ---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (333)
T ss_pred ---HCCEEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf ---2887222466311799899989999788876