HHsearch alignment for GI: 254780795 and conserved domain: cd06653
>cd06653 STKc_MEKK3_like_1 Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating
Probab=97.30 E-value=0.0023 Score=41.44 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=68.1
Q ss_pred CCCCCEEEEEEEEE-CCC-CEEEEEECCCCC----HH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH-HCCCCE
Q ss_conf 46681200179994-399-589998216699----88---999999999998532677555100102677875-224515
Q gi|254780795|r 30 IIHGVENSNFVIQT-SKG-TFILTIYEKRMN----EK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGF-LCKKPA 99 (316)
Q Consensus 30 i~~G~~Ntny~v~t-~~~-~yiLri~e~~~~----~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~-~~~k~~ 99 (316)
T Consensus 10 iG~G~fg~Vy~~~~~~tg~~~AvK~i~~~~~~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~~~~--~~~~~~~~~~~ 82 (264)
T cd06653 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH-----DRIVQYYG--CLRDPEEKKLS 82 (264)
T ss_pred EECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCEEE--EEECCCCCEEE
T ss_conf 722868499999988999799999985673246659999999999999987799-----99783999--99938998899
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 83 ivmEy~~gg~L~-----------~~l---~~-~~~l~--------e~~~------------~~~~~qi~~al~ylH~--- 124 (264)
T cd06653 83 IFVEYMPGGSIK-----------DQL---KA-YGALT--------ENVT------------RRYTRQILQGVSYLHS--- 124 (264)
T ss_pred EEEECCCCCCHH-----------HHH---HH-CCCCC--------HHHH------------HHHHHHHHHHHHHHHH---
T ss_conf 999814959889-----------999---87-49999--------9999------------9999999999999997---
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 125 ----~~iiHRDiKp~NIL~~~~~~vKl~DFG~a~ 154 (264)
T cd06653 125 ----NMIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred ----CCEEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf ----997766577899548899999998689872