HHsearch alignment for GI: 254780795 and conserved domain: cd06655
>cd06655 STKc_PAK2 Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptoti
Probab=97.96 E-value=0.00029 Score=47.22 Aligned_cols=139 Identities=17% Similarity=0.247 Sum_probs=78.0
Q ss_pred EEEEEECCCCCEEEEEEEEE-CCC-CEEEEEECC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 05310046681200179994-399-589998216--69988999999999998532677555100102677875224515
Q gi|254780795|r 24 LNSVQPIIHGVENSNFVIQT-SKG-TFILTIYEK--RMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 24 ~~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~--~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 21 Y~~~~~iG~G~fg~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~l~~---~~~~~~~~~ 92 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN-----PNIVNFLD---SFLVGDELF 92 (296)
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC-----CCCCCEEE---EEEECCEEE
T ss_conf 3962798038680999999889998999999862008538999999999996799-----89991999---999899999
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 93 ivmEy~~gg~L~~-----------~i~~-----~~l~--------e~~~------------~~i~~qil~aL~ylH~--- 133 (296)
T cd06655 93 VVMEYLAGGSLTD-----------VVTE-----TCMD--------EAQI------------AAVCRECLQALEFLHA--- 133 (296)
T ss_pred EEEECCCCCCHHH-----------HHHH-----CCCC--------HHHH------------HHHHHHHHHHHHHHHH---
T ss_conf 9996589992899-----------9870-----6999--------9999------------9999999999999998---
Q ss_pred HCCCCCEEECCCCCCCEEECC-CCCEEEECCCCCCC
Q ss_conf 107774440223464225627-96048731621356
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSCN 214 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~~ 214 (316)
T Consensus 134 ----~~IiHRDlKp~NILl~~~g~vK-l~DFGla~~ 164 (296)
T cd06655 134 ----NQVIHRDIKSDNVLLGMDGSVK-LTDFGFCAQ 164 (296)
T ss_pred ----CCCCCCCCCHHHEEECCCCCEE-EECCCCCEE
T ss_conf ----8874477976877888999999-981888777