HHsearch alignment for GI: 254780795 and conserved domain: cd07832
>cd07832 STKc_CCRK The catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase subfamily. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the deve
Probab=97.65 E-value=0.0015 Score=42.61 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=71.9
Q ss_pred EECCCCCEEEEEEEEEC-CCC-EEEEEECCCC--C--HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 00466812001799943-995-8999821669--9--8899999999999853267755510010267787522451557
Q gi|254780795|r 28 QPIIHGVENSNFVIQTS-KGT-FILTIYEKRM--N--EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~--~--~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 6 ~~iG~G~fg~V~~~~d~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~~l~~l~h-----pnIi~~~~---~~~~~~~~~iV 77 (286)
T cd07832 6 GRIGEGAHGIVFKAKHLETGETVALKKIHLRRLEGGIPNAALREIKALQACQH-----PNIVKLLD---VFPHGSGFVLV 77 (286)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEEE
T ss_conf 28632508499999988999899999981334484789999999999986799-----99892999---99989999999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN 181 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 181 (316)
T Consensus 78 mE~~~~~-L-----------~~~l---~~~~~~~~--------~~~------------i~~~~~qil~aL~yLH~----- 117 (286)
T cd07832 78 MEYMPSD-L-----------SEVL---RDSERPLP--------EAQ------------VKSYMRMLLKGLAHMHA----- 117 (286)
T ss_pred EECCCCC-H-----------HHHH---HHCCCCCC--------HHH------------HHHHHHHHHHHHHHHHH-----
T ss_conf 8489998-8-----------9999---86599989--------999------------99999999999999998-----
Q ss_pred CCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 77744402234642256279604873162135
Q gi|254780795|r 182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 118 --~~IiHrDiKPeNIll~~~~~vKL~DFG~a~ 147 (286)
T cd07832 118 --LGIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred --CCEEECCCCHHHEEECCCCCEEEECCCCCE
T ss_conf --995777587687798699988980166451