>cd07842 STKc_CDK8_like The catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with

Probab=97.04 E-value=0.0092 Score=37.48 Aligned_cols=141 Identities=15% Similarity=0.201 Sum_probs=69.1 Q ss_pred EECCCCCEEEEEEEE---ECCC-CEEEEEECCCCC-HH----HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC Q ss_conf 004668120017999---4399-589998216699-88----99999999999853267755510010267787522451 Q gi|254780795|r 28 QPIIHGVENSNFVIQ---TSKG-TFILTIYEKRMN-EK----DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP 98 (316) Q Consensus 28 ~~i~~G~~Ntny~v~---t~~~-~yiLri~e~~~~-~~----~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~ 98 (316) T Consensus 6 ~~lG~G~fg~V~~~~~~~~~~~~~~AiK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-----pnIv~l~~-~~~~~~~~~~ 79 (315) T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH-----ENVVSLVE-VFLEHADKSV 79 (315) T ss_pred EEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC-----CCCCCEEE-EEEECCCCEE T ss_conf 49832568198999984689994999999842101004668999999999986699-----88641778-9970898789 Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 55786478870768998999999998643675306875433231124564576675200155227889999999888765 Q gi|254780795|r 99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW 178 (316) Q Consensus 99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 178 (316) T Consensus 80 ~lv~E~~~~~l------------~~~i-~~~~~~~~~~~------~~~~----i--------~~i~~Qll~aL~yLH~-- 126 (315) T cd07842 80 YLLFDYAEHDL------------WQII-KFHRQAKRVSI------PPSM----V--------KSLLWQILNGVHYLHS-- 126 (315) T ss_pred EEEEECCCCCH------------HHHH-HHHHHHCCCCC------CHHH----H--------HHHHHHHHHHHHHHHH-- T ss_conf 99991379987------------9999-98666227889------9999----9--------9999999999999998-- Q ss_pred HHCCCCCEEECCCCCCCEEECC-----CCCEEEECCCCCC Q ss_conf 2107774440223464225627-----9604873162135 Q gi|254780795|r 179 PKNLPTGIIHADLFPDNVLFYN-----NKIMGLIDFYFSC 213 (316) Q Consensus 179 ~~~Lp~g~IHgDl~~~NiL~~~-----~~i~giIDF~~~~ 213 (316) T Consensus 127 -----~~IiHrDlKPeNILl~~~~~~~~~iK-l~DFG~a~ 160 (315) T cd07842 127 -----NWVLHRDLKPANILVMGEGPERGVVK-IGDLGLAR 160 (315) T ss_pred -----CCEEECCCCCCCEEEECCCCCCCCEE-ECCCCEEE T ss_conf -----89163337610079832567778788-66873036

HHsearch alignment for GI: 254780795 and conserved domain: cd07842