HHsearch alignment for GI: 254780795 and conserved domain: cd07847
>cd07847 STKc_CDKL1_4 The catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 subfamily. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformatio
Probab=97.95 E-value=0.00021 Score=48.18 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=73.7
Q ss_pred EEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCC-HH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 100466812001799943-995-89998216699-88---9999999999985326775551001026778752245155
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMN-EK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~-~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 6 ~~~lG~G~fg~V~~~~~~~t~~~vAiK~~~~~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~~~~---~~~~~~~~~l 77 (286)
T cd07847 6 LGKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH-----PNLVNLIE---VFRRKRRLHL 77 (286)
T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEECHHCCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEE
T ss_conf 428413608599999988999899999974002487899999999999987799-----79893999---9956998999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 78 VmE~~~~~~l~--------~l---~~--~--~~~l~--------e~~----~--------~~i~~qll~al~ylH~---- 118 (286)
T cd07847 78 VFEYCDHTVLN--------EL---EK--N--PRGVP--------EHQ----I--------KKIIWQTLQAVNFCHK---- 118 (286)
T ss_pred EEECCCCCCHH--------HH---HH--C--CCCCC--------HHH----H--------HHHHHHHHHHHHHHHH----
T ss_conf 99658998499--------99---97--3--79989--------999----9--------9999999999999998----
Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 077744402234642256279604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 119 ---~~iiHRDlKpeNILl~~~~~iKl~DFG~a~ 148 (286)
T cd07847 119 ---HNCIHRDVKPENILITKQGQIKLCDFGFAR 148 (286)
T ss_pred ---CCCCCCCCCHHHEEECCCCCEEEEECCCCE
T ss_conf ---887426455111038789949996412530