HHsearch alignment for GI: 254780795 and conserved domain: cd07847

>cd07847 STKc_CDKL1_4 The catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 subfamily. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformatio
Probab=97.95  E-value=0.00021  Score=48.18  Aligned_cols=137  Identities=16%  Similarity=0.191  Sum_probs=73.7

Q ss_pred             EEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCC-HH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf             100466812001799943-995-89998216699-88---9999999999985326775551001026778752245155
Q gi|254780795|r   27 VQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMN-EK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN  100 (316)
Q Consensus        27 ~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~-~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~  100 (316)
T Consensus         6 ~~~lG~G~fg~V~~~~~~~t~~~vAiK~~~~~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~~~~---~~~~~~~~~l   77 (286)
T cd07847           6 LGKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH-----PNLVNLIE---VFRRKRRLHL   77 (286)
T ss_pred             EEEEECCCCEEEEEEEECCCCCEEEEEEECHHCCCHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEEE
T ss_conf             428413608599999988999899999974002487899999999999987799-----79893999---9956998999


Q ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r  101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK  180 (316)
Q Consensus       101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  180 (316)
T Consensus        78 VmE~~~~~~l~--------~l---~~--~--~~~l~--------e~~----~--------~~i~~qll~al~ylH~----  118 (286)
T cd07847          78 VFEYCDHTVLN--------EL---EK--N--PRGVP--------EHQ----I--------KKIIWQTLQAVNFCHK----  118 (286)
T ss_pred             EEECCCCCCHH--------HH---HH--C--CCCCC--------HHH----H--------HHHHHHHHHHHHHHHH----
T ss_conf             99658998499--------99---97--3--79989--------999----9--------9999999999999998----


Q ss_pred             CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             077744402234642256279604873162135
Q gi|254780795|r  181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       119 ---~~iiHRDlKpeNILl~~~~~iKl~DFG~a~  148 (286)
T cd07847         119 ---HNCIHRDVKPENILITKQGQIKLCDFGFAR  148 (286)
T ss_pred             ---CCCCCCCCCHHHEEECCCCCEEEEECCCCE
T ss_conf             ---887426455111038789949996412530