HHsearch alignment for GI: 254780795 and conserved domain: cd07860
>cd07860 STKc_CDK2_3 The catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A comp
Probab=97.87 E-value=0.00031 Score=47.03 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=74.2
Q ss_pred EEECCCCCEEEEEEEEEC-CC-CEEEEEECCCCCH----HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 100466812001799943-99-5899982166998----89999999999985326775551001026778752245155
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKRMNE----KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~~~----~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 5 l~~iG~G~fg~V~~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~l~~---~~~~~~~~yi 76 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-----PNIVKLLD---VIHTENKLYL 76 (284)
T ss_pred EEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC-----CCEEEEEE---EECCCCEEEE
T ss_conf 178523658499999988999899999981221333669999999999986799-----99814610---0444998999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 77 v~E~~~~~------L~------~~~~~~~--~~~~~--------~~~i------------~~~~~Qil~al~yLH~---- 118 (284)
T cd07860 77 VFEFLHQD------LK------KFMDASP--LSGIP--------LPLI------------KSYLFQLLQGLAFCHS---- 118 (284)
T ss_pred EEECCCCC------HH------HHHHHCC--CCCCC--------HHHH------------HHHHHHHHHHHHHHHH----
T ss_conf 99648987------89------9987525--68999--------9999------------9999999999999987----
Q ss_pred CCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf 07774440223464225627-9604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~ 213 (316)
T Consensus 119 ---~~IiHRDiKPeNILl~~~~~iK-l~DFGla~ 148 (284)
T cd07860 119 ---HRVLHRDLKPQNLLINTEGAIK-LADFGLAR 148 (284)
T ss_pred ---CCCEEEECCHHHEEECCCCCEE-EEECCCCC
T ss_conf ---8936732675664688999899-94357522